Information for 2-CTACCATTGAGV (Motif 2)

A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
Reverse Opposite:
A C G T A T G C A C G T A T G C C G T A C G T A A C G T A C T G A C T G C G A T C G T A C T A G
p-value:1e-7
log p-value:-1.696e+01
Information Content per bp:1.839
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif70.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets54.0 +/- 52.6bp
Average Position of motif in Background100.7 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTACCATTGAGV
ATTTTCCATT----
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTACCATTGAGV
-NNCCATTGTNN
A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
A C G T C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTACCATTGAGV--
NNCATTCATTCATNNN
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTACCATTGAGV
-AGCCAATCAGA
A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFATC4/MA1525.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTACCATTGAGV
ATTTTCCATN----
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTACCATTGAGV
ATTTTCCATT----
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTACCATTGAGV---
TGTTCCCATTGTGTACT
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

NFYA/MA0060.3/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTACCATTGAGV
-AACCAATCAGA
A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTACCATTGAGV
ACTAGCCAATCA--
A C G T A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTACCATTGAGV
-NNCCATTGTNN
A G T C A C G T C G T A A G T C A G T C C G T A A C G T A C G T A T C G C G T A A T C G T A C G
A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T