Information for 17-CAATTTAGCA (Motif 27)

A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C T G
p-value:1e-7
log p-value:-1.759e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets143.3 +/- 51.2bp
Average Position of motif in Background110.0 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAATTTAGCA
ATAAACAATTAAACA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTTAGCA
NNCNNAACAATTNT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAATTTAGCA----
ANATTTTTGCAANTN
A C G T A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CAATTTAGCA--
--NNTTGGCANN
A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

DMRTC2/MA1479.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAATTTAGCA---
-AATGTATCAATT
A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAATTTAGCA--
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAATTTAGCA--
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTTAGCA
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CAATTTAGCA-
NNNNTGAATTCANNNC
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

POU3F3/MA0788.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAATTTAGCA----
-AAATTAGCATAAT
A G T C C G T A C G T A A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T