Information for 18-ATAGTGGTAA (Motif 31)

C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G T C C G T A A G T C A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.047e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif97.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background147.9 +/- 93.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0066.1_Hoxc11/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATAGTGGTAA-----
TAAAGTCGTAAAATAG
A C G T C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATAGTGGTAA-----
TAAAGTCGTAAAACAT
A C G T C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATAGTGGTAA--
--AATGGAAAAT
C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PH0065.1_Hoxc10/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATAGTGGTAA-----
TAAAGTCGTAAAACGT
A C G T C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATAGTGGTAA--
--NATGGAAAAN
C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATAGTGGTAA------
CAAGGTCGTAAAATCTT
A C G T C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATAGTGGTAA
AAGGTGTKAA
C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATAGTGGTAA------
TAAGGTCGTAAAATCCT
A C G T C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATAGTGGTAA--
--CCTGGGAAAG
C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATAGTGGTAA---
--AGTCGTAAAAA
C G T A A C G T C G T A A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A