Information for 9-GGTCGCCTTT (Motif 30)

A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C T G A G T C A C T G C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.919e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTCGCCTTT----
NNNGTGACCTTTGNNN
A C G T A C G T A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGTCGCCTTT--
NTCGCGCGCCTTNNN
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGTCGCCTTT--
ANCGCGCGCCCTTNN
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGTCGCCTTT----
--TGACCTTTNCNT
A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR4A1/MA1112.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTCGCCTTT--
NNTGACCTTTNN
A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

YY2/MA0748.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTCGCCTTT-
CGCCGCCATNN
A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTCGCCTTT
-GTGACCTT-
A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTCGCCTTT----
NNNNTGACCTTTNNNN
A C G T A C G T A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGTCGCCTTT---
-GTGACCTTGRVN
A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTCGCCTTT
BNTGDCCTTG
A C T G A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G