| p-value: | 1e-6 |
| log p-value: | -1.519e+01 |
| Information Content per bp: | 1.724 |
| Number of Target Sequences with motif | 15.0 |
| Percentage of Target Sequences with motif | 1.48% |
| Number of Background Sequences with motif | 130.1 |
| Percentage of Background Sequences with motif | 0.27% |
| Average Position of motif in Targets | 122.7 +/- 47.7bp |
| Average Position of motif in Background | 103.3 +/- 60.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORC/MA1151.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATAGGWCS ATAAGTAGGTCA |
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MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 2 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATAGGWCS --AGGTCA |
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RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----ATAGGWCS- TATAAGTAGGTCAA |
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HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATAGGWCS NTATYGATCH |
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PB0049.1_Nr2f2_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATAGGWCS---- TCTCAAAGGTCACGAG |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATAGGWCS AAYTAGGTCA |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATAGGWCS AAYTAGGTCA |
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|
|
NFY(CCAAT)/Promoter/Homer
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATAGGWCS CCGATTGGCT- |
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|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATAGGWCS---- AAWCTAGGTCARDNN |
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|
NFYB/MA0502.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATAGGWCS- CTCATTGGCCAG |
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