Information for 17-CCCTTTGCAAGT (Motif 36)

A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.252e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCTTTGCAAGT-
---TATGCAAATC
A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCTTTGCAAGT
TACTTGGCAGA-
A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCAAGT
-NATTTGCATNN
A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
A C G T G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCTTTGCAAGT
--ATTTGCATAT
A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCTTTGCAAGT
TTCATTTGCATAT
A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCCTTTGCAAGT------
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCCTTTGCAAGT--
TACCATAGCAACGGT
A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCTTTGCAAGT
---TATGCAAAT
A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCCTTTGCAAGT
-NNTTGGCANN-
A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCCTTTGCAAGT
--CTTGGCAA--
A G T C A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T