Information for 4-TCATGTATCG (Motif 9)

A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T C G T A A G T C C G T A A C G T A C T G C G T A
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background96.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCATGTATCG--
-AATGTATCAAT
A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCATGTATCG---
-AATGTAACAATT
A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

DMRTC2/MA1479.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCATGTATCG---
-AATGTATCAATT
A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
A C G T G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCATGTATCG
GKVTCADRTTWC-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TCATGTATCG-
ANTNTTACATGTATNTA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

SIX1/MA1118.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCATGTATCG
TATCAGGTTAC-
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TCATGTATCG-
ANTATTACATGTANNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCATGTATCG
GKMTCADRTTWC-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TCATGTATCG-
NNTATTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

SIX2/MA1119.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCATGTATCG---
GTATCAGGTTTCAGNN
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T