Information for 18-AGGAGTGMTGAT (Motif 18)

C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C T G A A C T G A T G C G T C A A T G C A C G T G T A C G A T C G A C T
p-value:1e-5
log p-value:-1.285e+01
Information Content per bp:1.699
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif364.9
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets135.8 +/- 37.8bp
Average Position of motif in Background100.2 +/- 80.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGGAGTGMTGAT-----
--TAATGATGATCACTA
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:AGGAGTGMTGAT---
-------TTGATTGN
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

BACH2/MA1101.2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGTGMTGAT--
NAANGATGAGTCATGNTTN
A C G T A C G T A C G T A C G T A C G T C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T
C T G A C G T A C G T A A G C T T A C G T C G A A G C T C A T G T G C A A T C G A C G T G T A C C T G A A G C T C A T G T A G C G C A T G C A T G C A T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGAGTGMTGAT--------
---ANNNATGATACCCCATC
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0105.1_Arid3a_2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGAGTGMTGAT------
---NNATNTGATANNNNN
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGAGTGMTGAT--------
---TNNNATGATTTCNNCNN
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGAGTGMTGAT--------
---AATNTTGATACCCTATN
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGAGTGMTGAT
---NNNANTGA-
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AGGAGTGMTGAT-----
-------ATGATGCAAT
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGGAGTGMTGAT-----
-------MTGATGCAAT
C G T A C A T G A C T G T G C A A T C G A C G T T A C G G T A C A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T