Information for 2-GCCTTACCGG (Motif 9)

A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A C G T C G T A C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-9.025e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTACCGG
NNACTTACCTN
A C G T A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCTTACCGG
NCCTTATCTG
A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G

PB0020.1_Gabpa_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCTTACCGG--------
-CAATACCGGAAGTGTAA
A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T G A C G C T A G C A T C T G A T A G C T G A C A C T G A C T G C G T A C G T A T C A G G A C T C A T G G A C T C G T A T C G A

GATA5/MA0766.2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCTTACCGG
NCCTTATCTG
A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G
A C G T A G T C T A G C G C A T C G A T C G T A A C G T A G T C C G A T T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTACCGG--
TGCCCTNAGGGCA
A C G T A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTACCGG----
NTNTTCTTATCAGTNTN
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

GATA4/MA0482.2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCTTACCGG-
TTCCTTATCTTT
A C G T A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G A C G T
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCTTACCGG
NNCTTATCTN
A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCTTACCGG-
-YCTTATCTBN
A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCTTACCGG-
-NRYTTCCGGY
A C T G A G T C A G T C A C G T A C G T C G T A A G T C A G T C A C T G A C T G A C G T
A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T