Information for 18-CCACTAGTTA (Motif 37)

A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.418e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.5 +/- 28.3bp
Average Position of motif in Background96.4 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)-3.6
Multiplicity (# of sites on avg that occur together)4.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:CCACTAGTTA--
--ACTAGTTAAC
A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGTTA-----
GAAAACTAGTTAACATC
A C G T A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0039.1_Mnx1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGTTA----
NNNCACTAATTANTNN
A C G T A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CCACTAGTTA-
---CTAATTAA
A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

PH0027.1_Emx2/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGTTA-----
NNCCACTAATTAGNNNT
A C G T A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G C A G T A T G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G A T C G C G A T

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGTTA------
ANNNCTAGTTAACNGNN
A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0031.1_Evx1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGTTA-----
NNNCACTAATTAGTNNT
A C G T A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C T G G C A T A T G C T A G C T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T C A G T A G T C C G A T

PH0175.1_Vax2/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGTTA----
GTGCACTAATTAAGAC
A C G T A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

PH0135.1_Phox2a/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCACTAGTTA------
NNACTAATTAATNNNN
A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

PH0030.1_Esx1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGTTA------
TCNATTAATTAATNNAN
A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T A G C G T C A T C G A G A C T G A C T C G T A C T G A A G C T G A C T C T G A C T G A G A C T A T C G T C A G C G T A C G A T