Information for 8-AGGATCGTTA (Motif 12)

C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A C T G C G T A A C G T A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.796e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background138.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA9/MA0594.2/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGGATCGTTA---
---GTCGTAAACG
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGGATCGTTA-
-DGATCRATAN
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

OVOL1/MA1544.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGATCGTTA----
AAAACCGTTATTTG
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G T A G C T A A G T C A G T C C A T G A C G T A C G T G T C A A G C T A G C T G A C T A T C G

OVOL2/MA1545.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGATCGTTA----
-GTACCGTTATGTG
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGATCGTTA-----
AAAACATCGTTTTTAAG
A C G T A C G T C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

HOXA4/MA1496.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGATCGTTA-
---GTCATTAG
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGGATCGTTA---
--GGTCGTAAAAT
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGGATCGTTA----
--GGTCGTAAAATT
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGATCGTTA
---ATTGTTA
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGATCGTTA---
---GTCGTAAAAA
C G T A A C T G A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A