| p-value: | 1e-10 |
| log p-value: | -2.335e+01 |
| Information Content per bp: | 1.878 |
| Number of Target Sequences with motif | 15.0 |
| Percentage of Target Sequences with motif | 1.92% |
| Number of Background Sequences with motif | 89.1 |
| Percentage of Background Sequences with motif | 0.19% |
| Average Position of motif in Targets | 90.2 +/- 37.3bp |
| Average Position of motif in Background | 103.0 +/- 52.6bp |
| Strand Bias (log2 ratio + to - strand density) | 1.4 |
| Multiplicity (# of sites on avg that occur together) | 1.20 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0068.1_Sox1_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTGAATTTTTAT NNNTATTGAATTGNNN- |
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Nr2e1/MA0676.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTGAATTTTTAT TTGACTTTT--- |
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|
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTGAATTTTTAT--- ATGAATATTCATGAG |
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|
LIN54/MA0619.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TTGAATTTTTAT ATTTGAATT----- |
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|
|
ONECUT3/MA0757.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTGAATTTTTAT NTTATTGATTTTTT-- |
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|
|
PB0146.1_Mafk_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTGAATTTTTAT- CCTTGCAATTTTTNN |
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|
|
PH0144.1_Pou2f2/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTGAATTTTTAT---- TNTAATTTGCATANNN |
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|
|
POU2F2/MA0507.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TTGAATTTTTAT-- -TTCATTTGCATAT |
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|
|
PB0066.1_Sox17_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTGAATTTTTAT- NNATNAATTGTTTNN |
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|
|
PH0057.1_Hoxb13/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TTGAATTTTTAT------ --NNAATTTTATTGGNTN |
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