Information for 15-TTAGGAGAATTT (Motif 19)

A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A C G T A
p-value:1e-4
log p-value:-9.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTAGGAGAATTT
-NNGGGGAATNC
A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

POU3F3/MA0788.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAGGAGAATTT
ATTATGCTAATTT
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGAGAATTT
NAATTTTACGAGNTNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGAGAATTT
ANATTTTACGAGNNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TTAGGAGAATTT--
----GGGAATTTCC
A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTAGGAGAATTT-
NNCNNAACAATTNT
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTAGGAGAATTT---
TTAAGAACAATAAATT
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTAGGAGAATTT
TTATGCAAATTA
A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

HOXC13/MA0907.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTAGGAGAATTT
NTTTTACGAGN----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTAGGAGAATTT
TTATGCAAATTA
A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A