Information for 11-TGCAGACAGGCC (Motif 14)

A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A
p-value:1e-4
log p-value:-9.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGCAGACAGGCC
-CCAGACRSVB-
A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGCAGACAGGCC
-CCAGACAG---
A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGCAGACAGGCC
GGTGYTGACAGS--
A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGCAGACAGGCC-
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCAGACAGGCC
-BCAGACWA---
A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGCAGACAGGCC
RHHCAGAGAGGB-
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCAGACAGGCC----
-SCAGYCADGCATGAC
A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TGCAGACAGGCC--------
------CAGGCCNNGGCCNN
A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGCAGACAGGCC---
-------AGGCCTNG
A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGCAGACAGGCC-
-----CTAGGCCT
A C G T A C T G A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T