Information for 18-AGCCCAATAACA (Motif 19)

C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C T G A G T C A C G T
p-value:1e-3
log p-value:-8.991e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGCCCAATAACA----
AACCCAATAAAATTCG
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXA13/MA0650.2/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGCCCAATAACA-
--CCCAATAAAAC
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A C G T
A C G T A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

HOXD13/MA0909.2/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AGCCCAATAACA-
--CCCAATAAAAC
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A C G T
A C G T A C G T T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGCCCAATAACA
--CCYMATAAAA
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

HOXB13/MA0901.2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGCCCAATAACA---
-AACCAATAAAATTT
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

ZNF449/MA1656.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGCCCAATAACA
CCAAGCCCAACCAG-
A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGCCCAATAACA-----
--AAAAATAACAAACGG
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCCCAATAACA----
CTACCAATAAAATTCT
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

NFYC/MA1644.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCCCAATAACA
-AGCCAATCAGA
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A
A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGCCCAATAACA
-AACCAATCAGA
C G T A A C T G A G T C A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A
A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A