Information for 12-CAGAGAAAGCTA (Motif 15)

A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.830e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background186.3 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CAGAGAAAGCTA
NAGAGAAAGNA-
A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGAAAGCTA
GAAAGTGAAAGT--
A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGAGAAAGCTA-
AAACAGACAAAGGAAT
A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGAGAAAGCTA
RHHCAGAGAGGB---
A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CAGAGAAAGCTA
GNNACCGAGAATNNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGAGAAAGCTA---
GGAAAGCGAAACCAAAAC
A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CAGAGAAAGCTA
-ACTGAAACCA-
A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CAGAGAAAGCTA-
------AAGCTTG
A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

ETV4/MA0764.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGAAAGCTA
-ACAGGAAGTG-
A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A
A C G T T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGAGAAAGCTA---
GACAGAGATATCAGTGT
A C G T A C G T A G T C C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T