Information for 4-TAATTCATAT (Motif 12)

G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T
Reverse Opposite:
C G T A C A G T C T G A A C G T C T A G G T C A C G T A G A C T A C G T C T G A
p-value:1e-6
log p-value:-1.429e+01
Information Content per bp:1.751
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif37.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets55.3 +/- 22.5bp
Average Position of motif in Background106.5 +/- 56.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LMX1B/MA0703.2/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATTCATAT
TTAATTAAANT
A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T
C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TAATTCATAT
NTAATTAATAT
A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTCATAT--
CNNANTAATTAATTNNC
A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T A C G T A C G T
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTCATAT--
CNNAGTAATTAATTNNC
A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T A C G T A C G T
T A G C T C A G T C G A C T G A C A T G G A C T G T C A C G T A C G A T C G A T C T G A G C T A C G A T G C A T C G A T A C G T G A T C

Lhx3/MA0135.1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TAATTCATAT
GATTAATTAATTT
A C G T A C G T A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

mix-a/MA0621.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATTCATAT
NCTAATTAANN-
A C G T A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:7
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTCATAT--
NNAATTAATTAAAAANN
A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T A C G T A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T

LMX1A/MA0702.2/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAATTCATAT
NTAATTAA---
A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T
A C G T A G C T C G T A C T G A A C G T A C G T T C G A T C G A A C G T A C G T A C G T

PB0001.1_Arid3a_1/Jaspar

Match Rank:9
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TAATTCATAT--
GGGTTTAATTAAAATTC
A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T A C G T A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TAATTCATAT--
CGAATTAATTAAAAACC
A C G T A C G T A C G T A C G T A C G T G A C T C G T A C T G A A C G T A C G T G A T C C G T A G A C T G T C A A C G T A C G T A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C