Information for 19-GGAKGCCTACWG (Motif 24)

A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A C G T C T G A A C T G C T A G A G T C G T A C A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.105e+01
Information Content per bp:1.902
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets96.2 +/- 42.7bp
Average Position of motif in Background83.4 +/- 91.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGAKGCCTACWG
--AGGCCTNG--
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAKGCCTACWG
--AGGCCTAG--
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGAKGCCTACWG-
---CACCTACTAT
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G A C G T
A C G T A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAKGCCTACWG-----
--RGMCCTACTRTGTGC
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAKGCCTACWG
--ATGCCAACC-
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G
A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGAKGCCTACWG--
---NNCCTGCTGNG
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

OSR1/MA1542.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGAKGCCTACWG--
----TGCTACTGTT
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGAKGCCTACWG---
GGCCYCCTGCTGDGH
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGAKGCCTACWG
HAWGRGGCCM----
A C G T A C G T A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGAKGCCTACWG-----
-CNNNGCTACTGTANNN
A C T G C T A G C G T A A C T G C T A G A G T C A G T C A G C T C G T A G T A C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T