Information for 1-AGCTCTGTTTTG (Motif 1)

C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C T G A G T C A C G T
p-value:1e-13
log p-value:-3.156e+01
Information Content per bp:1.972
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.0 +/- 14.6bp
Average Position of motif in Background91.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGCTCTGTTTTG-----
NNCTTTGTTTTGNTNNN
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCTGTTTTG-
NNGTANTGTTTTNC
A C G T C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGCTCTGTTTTG
TGCTGTGATTT-
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTCTGTTTTG
NNCTTTGTTNN-
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCTCTGTTTTG----
NNTTTTGTTTTGATNT
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCTCTGTTTTG
-CCTTTGTTTT-
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCTCTGTTTTG
-GCAGTGATTT-
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCTCTGTTTTG----
-GTNTTGTTGTGANNT
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

GFI1/MA0038.2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCTCTGTTTTG
TGCAGTGATTTN
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G

PRDM4/MA1647.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGCTCTGTTTTG-
--GTCTGTTTCTA
C G T A A C T G A G T C A C G T A G T C A C G T A C T G A C G T A C G T C G A T A C G T A C T G A C G T
A C G T A C G T C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A