Information for 9-CAAAATATTGGA (Motif 10)

A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-9.118e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets161.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAAAATATTGGA
NNTNNCAATATTAG-
A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAAAATATTGGA
NNTNNCAATATTAG-
A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAAAATATTGGA
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAAAATATTGGA----
NAAANTTATTGAANCAN
A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAATATTGGA---
GAAAAAATTGCAAGG
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAAATATTGGA
--AATTATT---
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAAATATTGGA
CCATATATGG--
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAAAATATTGGA
CAATTGCAAAAATAT---
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAAATATTGGA
TTCCATATATGGAA
A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CAAAATATTGGA
CCAAAAATAG----
A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G A C T G C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T