Information for 4-AGATCAGTCAAC (Motif 5)

C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A A G T C A C G T A C T G G T C A A C G T A G T C A C G T
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.950
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.9 +/- 52.5bp
Average Position of motif in Background163.8 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGATCAGTCAAC--
GAAGATCAATCACTTA
A C G T A C G T C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGATCAGTCAAC
CCATCAATCAAA
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGATCAGTCAAC-
-GATGAGTCATCC
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T
A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

FOS::JUND/MA1141.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGATCAGTCAAC-
GGATGAGTCATCG
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T
A C T G C A T G T C G A A G C T A C T G G T C A T C A G A C G T G T A C C G T A A G C T T G A C T A C G

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGATCAGTCAAC-
NNATGAGTCATNN
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T
C A T G A C G T T C G A G A C T C A T G G T C A T A C G G C A T G T A C C G T A A G C T G T A C C T G A

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGATCAGTCAAC-
NNATGAGTCATNN
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T
A C T G C A T G T C G A A G C T C A T G G T C A T C A G C G A T G T A C C T G A A G C T G T A C T G C A

JUND/MA0491.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGATCAGTCAAC-
NNATGAGTCATNN
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T
C T A G C A T G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGATCAGTCAAC--
AAAGACCTGTCAATCC
A C G T A C G T C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

FOS::JUN/MA0099.3/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGATCAGTCAAC
--ATGAGTCATC
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C
A C G T A C G T T C G A G A C T C A T G G T C A T A C G C G A T G T A C C G T A A G C T T G A C

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGATCAGTCAAC--
NNATGAGTCATNNN
C G T A A C T G C G T A A C G T A G T C C G T A A C T G A C G T A G T C C G T A G T C A A G T C A C G T A C G T
A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T