| p-value: | 1e-16 |
| log p-value: | -3.697e+01 |
| Information Content per bp: | 1.954 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.84% |
| Number of Background Sequences with motif | 0.6 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 94.3 +/- 59.5bp |
| Average Position of motif in Background | 128.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 2.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GGACCTAATTAG-- ----CTAATTAGCN |
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PH0058.1_Hoxb3/Jaspar
| Match Rank: | 2 |
| Score: | 0.75 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGACCTAATTAG----- TGAGCTAATTAGTTGGA |
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PAX4/MA0068.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.74 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GGACCTAATTAG ----CTAATTAG |
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PH0175.1_Vax2/Jaspar
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GGACCTAATTAG----- -GNCTTAATTAGTGNNN |
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VSX2/MA0726.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.73 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GGACCTAATTAG ----NTAATTAG |
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|
|
PH0154.1_Prrx1/Jaspar
| Match Rank: | 6 |
| Score: | 0.73 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGACCTAATTAG---- ANNAGTTAATTAGTTAN |
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Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
| Match Rank: | 7 |
| Score: | 0.72 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGACCTAATTAG ---NCTAATTA- |
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PH0034.1_Gbx2/Jaspar
| Match Rank: | 8 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGACCTAATTAG----- AGCGCTAATTAGCGATT |
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LHX6/MA0658.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.72 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGACCTAATTAG- ---NCTAATTAGT |
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Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 10 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGACCTAATTAG --ADBTAATTAR |
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