Information for 1-TCGCTTTG (Motif 28)

A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C T G A G T C A C T G C G T A
p-value:1e-3
log p-value:-7.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif7387.9
Percentage of Background Sequences with motif9.61%
Average Position of motif in Targets73.2 +/- 22.9bp
Average Position of motif in Background100.6 +/- 71.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TCGCTTTG----
-NNCTTTGTTNN
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TCGCTTTG----
-TCCTTTGATGT
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCGCTTTG----
--CCTTTGATGT
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCGCTTTG------
TNCCTTTGATCTTN
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

SOX4/MA0867.2/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCGCTTTG---
-NCCTTTGTTC
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCGCTTTG--
ANTTTCGCTTTCGN
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCGCTTTG-------
NNTTCCTTTGATCTANA
A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TCGCTTTG-------
ATTTCCTTTGATCTATA
A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCGCTTTG----
--CCWTTGTYYB
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCGCTTTG----
--CCTTTGATST
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T