Information for 1-BCABCGTGCAGA (Motif 1)

A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A
Reverse Opposite:
C G A T A G T C A C G T A C T G A G T C C G T A A T G C A C T G T A C G A C G T A T C G T A C G
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.741
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif156.2
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets65.0 +/- 50.0bp
Average Position of motif in Background100.8 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-BCABCGTGCAGA--
TTGACCGAGAATTCC
A C G T A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:BCABCGTGCAGA----
--GCCGCGCAGTGCGT
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

ELF2/MA1483.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:BCABCGTGCAGA-
-AACCCGGAAGTA
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A A C G T
A C G T C G T A G C T A G T A C T A G C G T A C A C T G C T A G T C G A G C T A T C A G G A C T T C G A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:BCABCGTGCAGA------
-NNNANTGCAGTGCNNTT
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--BCABCGTGCAGA
DCTCAGCAGG----
A C G T A C G T A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:BCABCGTGCAGA
------NGAAGC
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

ELF4/MA0641.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:BCABCGTGCAGA-
-AACCCGGAAGTG
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A A C G T
A C G T C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:BCABCGTGCAGA-
-CCCCCTGCTGTG
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:BCABCGTGCAGA
-GGACGTGC---
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:BCABCGTGCAGA
-TTGCGTGCVA-
A G T C A T G C C G T A A G T C A G T C A T C G C G A T A C T G G T A C C G T A C T A G C G T A
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T