Information for 4-RATARYAGCG (Motif 11)

C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G
Reverse Opposite:
A T G C A T C G G A T C C G A T T C G A G A T C C A G T T G C A G A C T A G T C
p-value:1e-8
log p-value:-2.034e+01
Information Content per bp:1.650
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets93.2 +/- 62.5bp
Average Position of motif in Background90.4 +/- 48.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:RATARYAGCG
-----CAGCC
C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---RATARYAGCG----
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---RATARYAGCG----
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---RATARYAGCG----
TCNCTTTACAGCGNNNT
A C G T A C G T A C G T C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

OSR1/MA1542.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RATARYAGCG
NACAGTAGCN
C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-RATARYAGCG
AGATAAGANN-
A C G T C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G
C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C A C G T

RFX7/MA1554.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RATARYAGCG
-NTAGCAACG
C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G
A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---RATARYAGCG---
ATTTACAGTAGCAAAA
A C G T A C G T A C G T C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

GATA3/MA0037.3/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RATARYAGCG
AGATAAGA---
A C G T C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G
G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-RATARYAGCG
AGATAASR---
A C G T C T A G C T G A A C G T G T C A C T A G A G C T G C T A C T A G T A G C T A C G
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T