Information for 10-TGAACTGT (Motif 33)

A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A
p-value:1e-2
log p-value:-6.397e+00
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif423.4
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets90.7 +/- 42.4bp
Average Position of motif in Background97.9 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-TGAACTGT
ATGAACTTT
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGAACTGT-
TTGAMCTTTG
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

VDR/MA0693.2/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGAACTGT
TGAACTCA
A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

MYB/MA0100.3/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGAACTGT-
ACCAACTGTC
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGAACTGT----
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAACTGT--
NHAACBGYYV
A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGAACTGT----
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGAACTGT----
NNNNTGACCTTTNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGAACTGT--
--AACCGANA
A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGAACTGT---
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A