Information for 4-CATTGTCGCA (Motif 11)

A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G C G T A A G T C C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.761e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CATTGTCGCA
CTCATTGTC---
A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CATTGTCGCA
NNCCATTGTNN--
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

ZFP57/MA1583.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCA--
GCATTGCCGCAGT
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CATTGTCGCA
NNCCATTGTNN--
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCA
CCWTTGTYYB-
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

SOX18/MA1563.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CATTGTCGCA
GCATTGTN---
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCA
CCATTGTTNY-
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCA
CCATTGTTTT-
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCA
CCWTTGTY---
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CATTGTCGCA-
CCATTGTTYYBB
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C C G T A A C G T
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G