Information for 22-CTGTCTCTBT (Motif 38)

T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T
Reverse Opposite:
C G T A T C A G C G T A A T C G C G T A A T C G C G T A A G T C C G T A A C T G
p-value:1e-2
log p-value:-5.403e+00
Information Content per bp:1.836
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif404.2
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets120.3 +/- 47.2bp
Average Position of motif in Background109.4 +/- 78.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTCTBT
GTCTGTTTCTA-
A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T

Stat2/MA1623.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTCTBT--
NNTTTCTGTTTCT
A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T A C G T A C G T
C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

FOXE1/MA1487.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTCTBT----
NTTGTTTATTTAAGG
A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G C A T A G C T A C T G A C G T A C G T A C G T C T G A A G C T G C A T A G C T C G T A T C G A A C T G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGTCTCTBT
CTGTCTGG--
T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTCTBT
TTCTTTCTCTT-
A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTCTBT---
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTCTBT
VBSYGTCTGG--
A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGTCTCTBT--
NNGCTGTCACTCANN
A C G T A C G T A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGTCTCTBT
GCTGTG-----
A C G T T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGTCTCTBT
-TGTTTATTT
T G A C A C G T A C T G A C G T A T G C A C G T A T G C A C G T A G T C A C G T
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T