Information for 5-CACTVABCTBAA (Motif 5)

A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
Reverse Opposite:
C G A T A C G T T A C G C G T A A T C G T A C G A C G T A C T G C G T A A C T G A C G T A C T G
p-value:1e-5
log p-value:-1.157e+01
Information Content per bp:1.770
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif341.3
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets100.5 +/- 60.8bp
Average Position of motif in Background98.7 +/- 85.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACTVABCTBAA
GTACACTCAC-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CACTVABCTBAA
MRSCACTYAA-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACTVABCTBAA
AGCCACTCAAG----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACTVABCTBAA
AASCACTCAA-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACTVABCTBAA
ACCACTCAAAA---
A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACTVABCTBAA
TAACCACTCAAGAA--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CACTVABCTBAA
AAGCACTTAA-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTVABCTBAA
RSCACTYRAG----
A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACTVABCTBAA
ACCACTTAA-----
A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACTVABCTBAA
RGGGCACTAACY----
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T T A G C G T C A A G T C A T G C C G A T A G T C C G T A C G T A
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T