Information for 12-GAGGGCTTTCCA (Motif 17)

A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A C G T A C G T A A C T G A G T C A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-9.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets174.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GAGGGCTTTCCA
-GGGGATTTCC-
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGGGCTTTCCA
-GGGAATTTCC-
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGGGCTTTCCA
-GGGGATTTCC-
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAGGGCTTTCCA
NGGGGATTTCCC
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAGGGCTTTCCA--
----ATTTTCCATT
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAGGGCTTTCCA--
----ATTTTCCATT
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GAGGGCTTTCCA
-----TTTTCCA
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGGGCTTTCCA--
----ATTTTCCATT
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGGGCTTTCCA--
----ATTTTCCATT
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC4/MA1525.1/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAGGGCTTTCCA--
----ATTTTCCATN
A C T G C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T