Information for 22-GACTAAATGCAT (Motif 28)

A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.386e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACTAAATGCAT---
GGACTGAATTCATGCC
A C G T A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

ZNF24/MA1124.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACTAAATGCAT-
GAATGAATGAATG
A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

BARHL1/MA0877.2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GACTAAATGCAT
--CTAAACGG--
A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACTAAATGCAT---
ACTATGAATGAATGAT
A C G T A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GACTAAATGCAT
--TTAAGTGC--
A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GACTAAATGCAT
--CTAATKGV--
A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GACTAAATGCAT
-GCTAAACGGT-
A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GACTAAATGCAT----
------ATGMATATDC
A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GACTAAATGCAT------
-AAAATATGCATAATAAA
A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GACTAAATGCAT
ARGAGGMCAAAATGW--
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A C G T A C G T A A C G T A C T G A G T C C G T A A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T A C G T A C G T