Information for 6-AAAACCTA (Motif 25)

G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A
Reverse Opposite:
A G C T C T G A C A T G C T A G C A G T C G A T C G A T C G A T
p-value:1e-4
log p-value:-9.312e+00
Information Content per bp:1.782
Number of Target Sequences with motif141.0
Percentage of Target Sequences with motif13.44%
Number of Background Sequences with motif4727.6
Percentage of Background Sequences with motif9.80%
Average Position of motif in Targets101.7 +/- 57.4bp
Average Position of motif in Background98.4 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prdm15/MA1616.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAAACCTA----
AGGAAAACCTGGAGC
A C G T A C G T A C G T G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAAACCTA-------
AAAACCTGGANHGGR
G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

PB0181.1_Spdef_2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAAACCTA----
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

GRHL2/MA1105.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAACCTA----
NAAACCTGTTTN
G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T A C G T
G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAACCTA
TAATCCCN
G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

RUNX3/MA0684.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAACCTA----
AAAACCTCAAAT
G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T A C G T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAACCTA-----
-AAACATATGTTT
G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAAACCTA---
NNGGCGACACCTCNNN
A C G T A C G T A C G T A C G T A C G T G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

SIX1/MA1118.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAAACCTA---
GTAACCTGATA
G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

IRF5/MA1420.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAACCTA----
CCGAAACCGAAACT
A C G T A C G T G C T A C G T A C G T A G T C A A G T C G T A C A G C T T C G A A C G T A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T