Information for 8-CTTGTCCGTC (Motif 20)

A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C
Reverse Opposite:
C T A G C G T A T G A C C A T G A C T G C G T A A G T C C G T A C G T A A C T G
p-value:1e-9
log p-value:-2.125e+01
Information Content per bp:1.861
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif112.3
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets95.9 +/- 67.9bp
Average Position of motif in Background95.7 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CTTGTCCGTC-
GAGCCCTTGTCCCTAA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

NR6A1/MA1541.1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGTCCGTC--
NTGACCTTGAACTTGAN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C A C G T A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTGTCCGTC--
SCTGTCAVTCAV
A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C A C G T A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTCCGTC
TGACCTTGACCT--
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTGTCCGTC
BNTGDCCTTG
A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTGTCCGTC--
NCTGTCAATCAN
A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX3/MA1114.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTCCGTC----
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTGTCCGTC---
-GTGACCTTGRVN
A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTTGTCCGTC-
-ATGACCTTGA
A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTCCGTC
TGACCTTGACCT--
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G G A C T A G T C G T A C A C T G A C G T A G T C
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T