| p-value: | 1e-3 |
| log p-value: | -8.955e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 10.00% |
| Number of Background Sequences with motif | 1.4 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 153.0 +/- 0.0bp |
| Average Position of motif in Background | 171.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | CAGGCTTGAACT--- -----TTGAMCTTTG |
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NR1I3/MA1534.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | CAGGCTTGAACT-- -----ATGAACTTT |
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VDR/MA0693.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 6 |
| Orientation: | reverse strand |
| Alignment: | CAGGCTTGAACT-- ------TGAACTCA |
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ZBTB12/MA1649.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAGGCTTGAACT- --ATCTGGAACCC |
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NR6A1/MA1541.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGGCTTGAACT---- NTGACCTTGAACTTGAN |
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RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGGCTTGAACT TGACCTTGACCT |
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PAX6/MA0069.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CAGGCTTGAACT AANTCATGCGTGAA-- |
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Nr2e3/MA0164.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGGCTTGAACT CAAGCTT----- |
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Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGGCTTGAACT------ AACCGGTTNNAACCGGTTTN |
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E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGGCTTGAACT CWGGCGGGAA-- |
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