Information for 21-AGGCAGGCCTGT (Motif 36)

C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.595e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.0 +/- 0.0bp
Average Position of motif in Background55.8 +/- 48.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AGGCAGGCCTGT
--CNAGGCCT--
C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGGCAGGCCTGT
--CTAGGCCT--
C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAGGCCTGT-
NNGGCCACGCCTTTN
A C G T A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAGGCCTGT-
SCAGYCADGCATGAC
A C G T A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCAGGCCTGT----
-GGNGCGNCTGTTNNN
C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGGCAGGCCTGT-----
---CAGGCCNNGGCCNN
C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGCAGGCCTGT
AAGGCAAGTGT--
A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGGCAGGCCTGT-
-------GCTGTG
C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZFP42/MA1651.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAGGCCTGT------
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGGCAGGCCTGT--
GCAGCCAAGCGTGACN
A C G T A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C