| p-value: | 1e-3 |
| log p-value: | -9.148e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 162.0 +/- 0.0bp |
| Average Position of motif in Background | 53.5 +/- 1.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACTATGTATAAT--- AAAATATGCATAATAAA |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ACTATGTATAAT- ---ATGAATATTC |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ACTATGTATAAT--- ---ATGCATAATTCA |
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Dmrt1/MA1603.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ACTATGTATAAT GNTACTTTGTATC-- |
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PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ACTATGTATAAT--- ACCGTGACTAATTNN |
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MEF2B/MA0660.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ACTATGTATAAT GCTATTTATAGC |
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|
|
MEF2D/MA0773.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ACTATGTATAAT TCTATTTATAGN |
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OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ACTATGTATAAT---- -WYATGCATWATGCAT |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ACTATGTATAAT- ---ATGMATATDC |
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OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ACTATGTATAAT------ ---ATGAATWATTCATGA |
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