Information for 2-TCGGGTTTGA (Motif 7)

A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C A C T G C G T A
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets119.6 +/- 55.4bp
Average Position of motif in Background56.7 +/- 2.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX2/MA1119.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCGGGTTTGA---
GTATCAGGTTTCAGNN
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

SIX1/MA1118.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCGGGTTTGA
TATCAGGTTAC-
A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCGGGTTTGA
--AGGTGTGA
A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCGGGTTTGA
--AGGTGTGA
A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCGGGTTTGA
--AGGTGTGA
A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A
A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCGGGTTTGA
AAACCGGTTT--
A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TCGGGTTTGA
VGGTVTCAGRTTWCA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A
T A G C T C A G T C A G C A G T T C A G A C G T A G T C T C G A C T A G C T A G A C G T A C G T C G A T G T A C G T C A

TCF7/MA0769.2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCGGGTTTGA---
--TCCTTTGATGT
A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCGGGTTTGA-----
-----TTTGAAACCG
A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCGGGTTTGA-----
AATAGGGTATCAATTAT
A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T