Information for 3-TGATATACGCTC (Motif 3)

A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
Reverse Opposite:
A C T G C G T A A T C G A G T C A C T G A C G T C G T A A C G T C G T A A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.949
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif20.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets114.0 +/- 52.6bp
Average Position of motif in Background120.1 +/- 87.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six3/MA0631.1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATATACGCTC
ANANGTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATATACGCTC
ANANGTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGATATACGCTC
ANNNATGATACCCCATC
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGATATACGCTC-----
AAGCATACGCCCAACTT
A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C A C G T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PBX2/MA1113.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGATATACGCTC
NNTGATTTATGNN-
A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C A C G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGATATACGCTC
RTGATTKATRGN-
A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGATATACGCTC
AATNTTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGATATACGCTC--
ATGGGATATATCCGCCT
A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGATATACGCTC
ANANNTGATACCCNATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGATATACGCTC
ANANGTGATACCCCATT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C G T C G T A A G T C C T A G A T G C C G A T A G T C
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T