Information for 3-TACTAATG (Motif 5)

A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G A T C G T A A T C G A C G T C T G A
p-value:1e-4
log p-value:-1.080e+01
Information Content per bp:1.885
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif2880.3
Percentage of Background Sequences with motif4.59%
Average Position of motif in Targets76.9 +/- 34.3bp
Average Position of motif in Background101.0 +/- 80.6bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TACTAATG---
NNCTAATGGNN
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

HOXC4/MA1504.1/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TACTAATG--
--NTAATGAN
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

HOXB4/MA1499.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TACTAATG--
--NTAATGAT
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T

HOXD4/MA1507.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TACTAATG--
--NTAATGAN
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T

HOXA4/MA1496.1/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TACTAATG--
--NTAATGAC
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C

HOXB3/MA0903.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TACTAATG---
-NNTAATTANN
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

GSX2/MA0893.2/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TACTAATG--
--CTAATTAC
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T G A T C G A C T G T C A C T G A A G C T A C G T C T G A A T G C

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TACTAATG--
--NTAATTGN
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

NKX6-3/MA1530.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TACTAATG--
-TTTAATGAN
A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

PH0150.1_Pou4f3/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TACTAATG-----
AGTTATTAATGAGGTC
A C G T A C G T A C G T A G C T C G T A T A G C A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C