Information for 17-TATATAGCTC (Motif 35)

A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T C G T A A C G T C G T A A C G T C G T A
p-value:1e-2
log p-value:-6.784e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets14.0 +/- 0.0bp
Average Position of motif in Background95.5 +/- 82.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------TATATAGCTC
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------TATATAGCTC
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TATATAGCTC
TCTTTATATATAAATA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TATATAGCTC
ANNNGGATATATCCNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

RORC/MA1151.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATATAGCTC-
ATAAGTAGGTCA
A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C A C G T
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATATAGCTC--
TATAAGTAGGTCAA
A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

CDX2/MA0465.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TATATAGCTC
NTTTTATTGCNN
A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TATATAGCTC
KCCAAAAATAGC--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TATATAGCTC-
NGANTTTTATGGCTCN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

MF0008.1_MADS_class/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TATATAGCTC
CCATATATGG---
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A G T C A C G T A G T C
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T