Information for 13-ATCGTGTTAA (Motif 33)

C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A G T C C G T A A G T C A C T G C G T A A C G T
p-value:1e-3
log p-value:-7.402e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background93.2 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATCGTGTTAA
AAGGTGTKAA
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ATCGTGTTAA--
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATCGTGTTAA-
-AGGTGTTAAT
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCGTGTTAA-
AAGGTGTGAAA
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A A C G T
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATCGTGTTAA
NHGTCGTGAYDN
A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

TBX6/MA1567.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCGTGTTAA
GAGGTGTGAA
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATCGTGTTAA
NMMNBAAAGGGTTAA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

PB0109.1_Bbx_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATCGTGTTAA------
NNNNCTGTTAACNNTNN
A C G T C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

Foxo1/MA0480.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCGTGTTAA--
-TCCTGTTTACA
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C G T
A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATCGTGTTAA----
--CBTGTTTAYAWW
C G T A A C G T A G T C A C T G A C G T A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T