Information for 1-CTGGATAACT (Motif 1)

A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T
Reverse Opposite:
C G T A A C T G C G A T A C G T C G T A A C G T A T G C A G T C C G T A A C T G
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif158.9
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets136.0 +/- 37.0bp
Average Position of motif in Background93.2 +/- 79.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGGATAACT
-TGGAAAA--
A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

HLF/MA0043.3/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGGATAACT-
NNGTTGCATAACNN
A C G T A C G T A C G T A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T A C G T
G C A T C A G T T C A G G A C T C A G T C T A G G A T C T C G A G A C T G T C A C G T A A G T C G T C A G C T A

ZBTB26/MA1579.1/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CTGGATAACT
NNNNTTTCTGGAGNN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTGGATAACT--
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGATAACT
ATGMATATDC
A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGGATAACT-----
CCTTAGTTAACTAAAAT
A C G T A C G T A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGGATAACT----
ATGAATAATTAATG
A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T A C G T A C G T A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGGATAACT
-NGGATTAN-
A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGATAACT
NNATTGCATAANN
A C G T A C G T A C G T A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGGATAACT--
AAAATATGCATAATAAA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A T C G C G T A A C G T C G T A C G T A G T A C A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A