| p-value: | 1e-9 |
| log p-value: | -2.198e+01 |
| Information Content per bp: | 1.958 |
| Number of Target Sequences with motif | 12.0 |
| Percentage of Target Sequences with motif | 1.35% |
| Number of Background Sequences with motif | 50.0 |
| Percentage of Background Sequences with motif | 0.10% |
| Average Position of motif in Targets | 101.1 +/- 57.5bp |
| Average Position of motif in Background | 106.1 +/- 50.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.33 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCATTATAAG NNCTCATTAT--- |
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NKX6-3/MA1530.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.75 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCATTATAAG CTCATTAAA-- |
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|
PB0079.1_Sry_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCATTATAAG---- NANTATTATAATTNNN |
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|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCATTATAAG GTCATTAA--- |
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|
|
PB0174.1_Sox30_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCATTATAAG---- TAAGATTATAATACGG |
|
|
|
POU6F2/MA0793.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TCATTATAAG AGCTCATTAT--- |
|
|
|
HOXD4/MA1507.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCATTATAAG ATCATTAG--- |
|
|
|
PH0152.1_Pou6f1_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.70 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------TCATTATAAG- GCAACCTCATTATNNNN |
|
|
|
HOXB4/MA1499.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCATTATAAG ATCATTAG--- |
|
|
|
HOXA4/MA1496.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCATTATAAG GTCATTAG--- |
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