Information for 9-TGCACCTTGGAA (Motif 11)

A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A C T G A G T C C G T A
p-value:1e-4
log p-value:-9.606e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets165.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4A/MA0114.4/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCACCTTGGAA
NNTGGACTTTGNN-
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCACCTTGGAA
NNTGGACTTTGNN-
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGCACCTTGGAA-
NNTNCGCACCTGTNGAN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCACCTTGGAA--
---TACTTGGCAGA
A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCACCTTGGAA----
TGGACTTTGNNCTNTG
A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCACCTTGGAA--
----CSTGGGAAAD
A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

RBPJ/MA1116.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TGCACCTTGGAA--
----CCTGGGAAAG
A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCACCTTGGAA--
----CCTTTGAWGT
A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCACCTTGGAA
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGCACCTTGGAA--
-------TGGAAAA
A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A