Information for 9-GTGAGTAGAT (Motif 21)

A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T
Reverse Opposite:
T C G A A C G T A G T C G C A T C G T A A T G C C G A T A G T C C G T A G T A C
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.842
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif264.1
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets101.2 +/- 46.4bp
Average Position of motif in Background100.8 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGAGTAGAT
GTGAGTGNAC
A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGAGTAGAT-
-TGTCTAGACG
A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTGAGTAGAT-
-TGTCTAGACA
A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T A C G T
A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGTAGAT-
NNNTTGAGTGGNNN
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

ZSCAN29/MA1602.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGTAGAT-
NCNGTGTAGACG
A C G T A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGAGTAGAT---
NTGATTAAATTAN
A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T A C G T A C G T A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTGAGTAGAT
-TGTCTAGA-
A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGAGTAGAT--
TTGATTRGRTTA
A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T A C G T A C G T
G A C T C G A T A C T G C G T A A C G T A C G T C T A G C T A G C T A G A G C T A G C T C G T A

DUX4/MA0468.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTGAGTAGAT--
-TGATTAAATTA
A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T A C G T A C G T
A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTAGAT
NCGTGACN----
A C G T A C G T A C T G A C G T A C T G C G T A A T C G A C G T C G T A A C T G C G T A A G C T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T