Information for 24-ATCAAGAGGAGA (Motif 27)

C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-9.804e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.2/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATCAAGAGGAGA--
AATTCAACAGGTGGTT
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATCAAGAGGAGA-
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

SCRT2/MA0744.2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCAAGAGGAGA--
AAAGCAACAGGTGGTT
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCAAGAGGAGA
BTBRAGTGSN--
C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCAAGAGGAGA
-GCAACAGGTG-
C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A
A C G T A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATCAAGAGGAGA---
TAYAAAAGBWGGCAG
C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATCAAGAGGAGA
NTCAAGTGG---
C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATCAAGAGGAGA
GAGGTCAAAAGGTCA
A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATCAAGAGGAGA
NTCAAGTGGN--
C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ATCAAGAGGAGA-
-GAAACAGGAAGT
C G T A A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T
A C G T T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T