Information for 20-TCCGTTTAAG (Motif 35)

A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C T G A C G T A C G T A A G T C C T A G A C T G C G T A
p-value:1e-2
log p-value:-5.372e+00
Information Content per bp:1.945
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif41.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets69.4 +/- 43.8bp
Average Position of motif in Background112.9 +/- 43.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCCGTTTAAG
ANCGTTTANN
A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

BARHL1/MA0877.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TCCGTTTAAG
-NCGTTTAN-
A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCCGTTTAAG----
AACCGTTAAACGGTC
A C G T A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTTTAAG
BRRCVGTTDN--
A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCGTTTAAG
TGTCGGTT----
A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCCGTTTAAG
NNTTTCTGTTTCT-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCCGTTTAAG
-CTGTTTAC-
A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCCGTTTAAG
GTCTGTTTCTA
A C G T A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

Foxf1/MA1606.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCGTTTAAG-
NNTGTTTACAN
A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G A C G T
G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T

PB0184.1_Tbp_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCGTTTAAG-----
CCGATTTAAGCGACC
A C G T A G T C A G T C A C T G A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C