Information for 3-AGGAGACGCA (Motif 12)

C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G A C G T A G T C A C G T A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.464e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background129.7 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGAGACGCA----
AAGGKGRCGCAGGCA
A C G T C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGGAGACGCA--
NTNNNAGGAGTCTCNTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGGAGACGCA--
CTACTTGGATACGGAAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

JUN::JUNB/MA1132.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGAGACGCA-
-GATGACTCAT
C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A A C G T
A C G T C A T G T C G A C A G T A C T G C T G A A T G C C A G T G T A C G C T A G A C T

CTCFL/MA1102.2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGGAGACGCA
AGCAGGGGGCGC-
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGGAGACGCA--
GCGGAGGTGTCGCCTC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGGAGACGCA-
-CCAGACRSVB
C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGACGCA-
NNGGTCACGCTC
A C G T C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

Atf1/MA0604.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGAGACGCA
--ATGACGTA
C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGGAGACGCA
----CACGCA
C G T A A C T G A C T G C G T A A C T G C G T A A G T C A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A