Information for 8-CAGTSTGYWGRT (Motif 9)

A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T
Reverse Opposite:
C G T A A G C T A G T C C G A T C T G A A G T C G T C A A T C G C T G A A G T C C G A T A C T G
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.808
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif6.15%
Number of Background Sequences with motif183.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets96.9 +/- 52.3bp
Average Position of motif in Background99.8 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317/MA1593.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGTSTGYWGRT-
-NNTCTGCTGTNA
A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T A C G T
A C G T C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGTSTGYWGRT
DCTCAGCAGG-----
A C G T A C G T A C G T A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGTSTGYWGRT
CTGTCTGG----
A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGTSTGYWGRT
VBSYGTCTGG----
A C G T A C G T A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGTSTGYWGRT-----
--GTCWGCTGTYYCTCT
A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGTSTGYWGRT
TWGTCTGV----
A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

TCF3/MA0522.3/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGTSTGYWGRT---
----NNGCAGGTGNN
A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CAGTSTGYWGRT---
----NNGCAGGTGNN
A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAGTSTGYWGRT----
----SDGCAGGTGCNS
A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGTSTGYWGRT
CACAGN--------
A C G T A C G T A G T C C G T A A C T G A G C T A T G C A C G T A C T G A G C T C G T A A C T G C T G A A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T