Information for 11-GAATCTAATG (Motif 32)

A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.275e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background131.9 +/- 116.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GAATCTAATG---
--NNCTAATGGNN
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

HOXB4/MA1499.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAATCTAATG--
----NTAATGAT
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T

HOXC4/MA1504.1/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAATCTAATG--
----NTAATGAN
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

HOXD4/MA1507.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GAATCTAATG--
----NTAATGAN
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GAATCTAATG--
---TTTAATGAN
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

HOXA4/MA1496.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAATCTAATG--
----NTAATGAC
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C

HOXB3/MA0903.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAATCTAATG---
---NNTAATTANN
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

GSX2/MA0893.2/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAATCTAATG--
----CTAATTAC
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A C T G T C A C T G A A G C T A C G T C T G A A T G C

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAATCTAATG--
----NTAATTGN
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

PDX1/MA0132.2/Jaspar

Match Rank:10
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAATCTAATG--
----CTAATTAN
A C T G C G T A C G T A A C G T A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C