Information for 21-ATCATACATAGA (Motif 23)

C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C G T
p-value:1e-3
log p-value:-8.427e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets190.0 +/- 0.0bp
Average Position of motif in Background154.4 +/- 50.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATCATACATAGA--
GACCACATTCATACAAT
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATCATACATAGA
NTTGATACATT--
A C G T C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATCATACATAGA----
NNCATTCATTCATNNN
C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCATACATAGA
-CCATATATGG-
C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATCATACATAGA
TGAATTATGCAT---
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ATCATACATAGA
KCCAAAAATAGC
C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATCATACATAGA
DCYAAAAATAGM
C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATCATACATAGA--
TNNATTATGCATANNTT
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATCATACATAGA
ATGCATWATGCATRW-
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATCATACATAGA
CCATCAATCAAA--
A C G T A C G T C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T