Information for 3-GCAGCATATCAA (Motif 3)

A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T C T A G C G T A A C G T C T G A C A G T A T C G A G T C A C G T A C T G G T A C
p-value:1e-8
log p-value:-1.957e+01
Information Content per bp:1.750
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif38.46%
Number of Background Sequences with motif296.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets83.6 +/- 32.1bp
Average Position of motif in Background100.6 +/- 78.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG/MA0659.2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAGCATATCAA
GAGTCAGCATTTTTT
A C G T A C G T A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
C T A G C G T A T A C G C G A T G T A C C G T A A C T G G A T C C G T A C G A T G C A T G C A T G A C T G A C T G C A T

MAFF/MA0495.3/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAGCATATCAA-
AAGTCAGCATTTTTTT
A C G T A C G T A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A A C G T
C T G A C G T A T A C G C G A T G T A C C G T A C A T G A G T C C G T A C G A T G C A T G C A T G C A T G C A T G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATATCAA
NGTCAGCANTTT--
A C G T A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCAGCATATCAA
HWWGTCAGCAWWTTT-
A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCAGCATATCAA
NCTANGTCAGCAAATTT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCATATCAA--
ATTTGCATAACAAAG
A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

NRL/MA0842.2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCATATCAA
CGTCAGCANTTTT-
A C G T A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
G A T C T C A G A G C T G T A C C T G A A C T G A G T C C T G A G A T C C G A T G C A T G C A T G A C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCATATCAA
CACAGN-------
A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCATATCAA
AAGTCAGCANTTTTN
A C G T A C G T A C G T A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCAGCATATCAA-
---GHATATKCAT
A C T G A G T C G T C A A C T G A T G C G T C A A G C T G T C A C G A T A G T C G T C A C G T A A C G T
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T