Information for 1-CCCTCTCTAA (Motif 1)

A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C T G
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.926
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif159.2
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets72.8 +/- 68.3bp
Average Position of motif in Background116.6 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCCTCTCTAA--
VCCTCTCTGDDY
A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A A C G T A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTCTAA
NNNCCATCTGTNN
A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCTCTCTAA
NSCACTYVAV
A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTCTCTAA-
NNAGTCCCACTCNNNN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTCTAA-
NNCCATCTGTNNN
A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

MAZ/MA1522.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCTCTCTAA
CGCCCCTCCCC--
A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A
A T G C A T C G A T G C T A G C T A G C T A G C C A G T T G A C T A G C A G T C A G T C A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTCTAA--
TAACCACTCAAGAA
A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

GATA4/MA0482.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTCTAA
TTCCTTATCTTT
A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T

PRDM1/MA0508.3/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTCTAA
TTCTTTCTCTT-
A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCTCTAA----
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A G T C A G T C G T A C A C G T A G T C A C G T A G T C A C G T C G T A C T G A A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G