Information for 1-GCATACGTAT (Motif 4)

A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T A C T G A G T C
p-value:1e-4
log p-value:-9.297e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets105.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCATACGTAT---
TGTATATATATACC
A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

GMEB2/MA0862.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCATACGTAT
--TTACGTAA
A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

Gmeb1/MA0615.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCATACGTAT-----
GAGTGTACGTAAGATGG
A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCATACGTAT-----
GAGTGTACGTAAGATGG
A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCATACGTAT
CCATATGT--
A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCATACGTAT-
AYATGYATATGCATR
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCATACGTAT
GHATATKCAT
A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

PB0077.1_Spdef_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCATACGTAT----
GTACATCCGGATTTTT
A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCATACGTAT------
TNNTTTCGTATTNNANN
A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCATACGTAT
NAACATATGTTT
A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C T G A C G T C G T A A C G T
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T