Information for 18-GTTCCTGCTGAA (Motif 34)

A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A
Reverse Opposite:
G A C T A C G T A G T C C T G A A C T G A G T C C G T A C A T G A C T G C G T A C G T A A T G C
p-value:1e-4
log p-value:-9.369e+00
Information Content per bp:1.784
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets104.2 +/- 34.8bp
Average Position of motif in Background106.5 +/- 52.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTCCTGCTGAA
-NNCCTGCTGNG
A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A
A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GTTCCTGCTGAA-
---CCTGCTGAGH
A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic2/MA1629.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTTCCTGCTGAA--
CCCCCTGCTGTGNN
A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTTCCTGCTGAA
CCCCCTGCTGTG
A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTTCCTGCTGAA---
TNTCCTGCTGTGNNG
A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTCCTGCTGAA
ACTTCCTGNT---
A C G T A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTCCTGCTGAA---
NNTCCTGCTGTGNNN
A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTCCTGCTGAA---
TCNCCTGCTGNGNNN
A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTTCCTGCTGAA-
GGCCYCCTGCTGDGH
A C G T A C G T A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

IKZF1/MA1508.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTTCCTGCTGAA
NCTTCCTGTTNN-
A C G T A T C G A C G T C G A T G T A C G A T C A C G T C T A G G T A C A G C T C T A G G T C A C T G A
T C G A A G T C G C A T A G C T A G T C G A T C G C A T A T C G A G C T A C G T A G C T A G T C A C G T