Information for 2-YAMYCAAKAKMS (Motif 2)

A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
Reverse Opposite:
A T C G A C G T G T A C A C G T G T A C A C G T A C G T A C T G C T A G A C G T A C G T C T A G
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.783
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif231.7
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets54.5 +/- 43.2bp
Average Position of motif in Background97.8 +/- 81.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--YAMYCAAKAKMS
ACCACTCAAAA---
A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---YAMYCAAKAKMS-
AAAAAATCAATAAATA
A C G T A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-YAMYCAAKAKMS
CCAATCAA-----
A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:YAMYCAAKAKMS
-RRTCAATA---
A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----YAMYCAAKAKMS
TAACCACTCAAGAA--
A C G T A C G T A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----YAMYCAAKAKMS
CGACCCAATCAACGGTG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--YAMYCAAKAKMS
HNRAATCAAT----
A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---YAMYCAAKAKMS
AAAAAATCAATAAT-
A C G T A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---YAMYCAAKAKMS
AGCCACTCAAG----
A C G T A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--YAMYCAAKAKMS-
CTCACACAATGGCGC
A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A C G T A A C T G C G T A A C T G G T C A A T G C A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C