Information for 13-TATTAGGAGC (Motif 30)

A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C A C G T C G T A C G T A A C G T C G T A
p-value:1e-3
log p-value:-7.366e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background79.4 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TATTAGGAGC
NTTTTACGAGN
A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TATTAGGAGC---
NAATTTTACGAGNTNN
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TATTAGGAGC---
ANATTTTACGAGNNNN
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TATTAGGAGC
----CGGAGC
A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATTAGGAGC
ATAGTAGGTG-
A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TATTAGGAGC--
CCGTATTATAAACAA
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

HOXD10/MA1506.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TATTAGGAGC
NTTTTACGACC
A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TATTAGGAGC
ANTTTTACGACC
A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TATTAGGAGC
GCTATTTATAGC
A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TATTAGGAGC
NTTTTACGACT
A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C T G C G T A A C T G A G T C
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T