Information for 1-AMATTTTG (Motif 4)

C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.118e+01
Information Content per bp:1.905
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3338.2
Percentage of Background Sequences with motif3.64%
Average Position of motif in Targets88.3 +/- 67.2bp
Average Position of motif in Background100.0 +/- 87.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AMATTTTG-------
WCATTTTGKCCTCYT
C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AMATTTTG---
NNCTNAATTATGANN
A C G T A C G T A C G T A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AMATTTTG------
ANATTTTTGCAANTN
A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AMATTTTG-----
CTAATATTGCTAAA
A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AMATTTTG-----
CTAATATTGCTAAA
A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AMATTTTG
GCNGCCATCTTG
A C G T A C G T A C G T A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AMATTTTG-----
TTGACCTTTTGACCTT
A C G T A C G T A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AMATTTTG
CTCATTGTC
A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AMATTTTG
NNCNNAACAATTNT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Dmrt1/MA1603.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AMATTTTG----
GNTACTTTGTATC
A C G T C G T A T G C A C G T A C G A T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C