Information for 12-CCTGCGGATC (Motif 15)

A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.307e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background37.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTGCGGATC
CCTGCTGAGH
A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCGGATC
NNCCTGCTGNG-
A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCTGCGGATC---
---GCGGACCBWA
A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A

EBF1/MA0154.4/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGCGGATC
NNTCCCCTGGGGANN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCTGCGGATC-
GGGCCTGAGGCGGG
A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

Zic2/MA1629.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCGGATC-
CCCCCTGCTGTGNN
A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

TFAP2A/MA0003.4/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCGGATC-
NNGCCTGAGGCANN
A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCGGATC
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCTGCGGATC
CGCACCTGCCG---
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCGGATC
CCCCCTGCTGTG-
A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A A C G T A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T