Information for 10-GGTGCCAATAAA (Motif 13)

A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C
p-value:1e-3
log p-value:-9.069e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.2/Jaspar

Match Rank:1
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GGTGCCAATAAA--
---CCCAATAAAAC
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

HOXB13/MA0901.2/Jaspar

Match Rank:2
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GGTGCCAATAAA----
--AACCAATAAAATTT
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

HOXD13/MA0909.2/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GGTGCCAATAAA--
---CCCAATAAAAC
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTGCCAATAAA
GGTGCCAAGT--
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GGTGCCAATAAA-
---NCYAATAAAA
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGTGCCAATAAA-----
-CTACCAATAAAATTCT
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GGTGCCAATAAA-
---CCYMATAAAA
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGTGCCAATAAA-
---RGCAATNAAA
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T A C G T A C G T C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGTGCCAATAAA-----
-AACCCAATAAAATTCG
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

CDX2/MA0465.2/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGTGCCAATAAA--
--AAGCAATAAAAA
A C T G A C T G A C G T A C T G A G T C A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A