Information for 20-CACACAAATCTT (Motif 21)

A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.119e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CACACAAATCTT
CGAAGCACACAAAATA-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACACAAATCTT--
NNCCATAAATCATNN
A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACACAAATCTT
ACCACTCAAAA---
A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACACAAATCTT-
GTCATAAATCATT
A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACACAAATCTT-
CTCACACAATGGCGC
A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CACACAAATCTT
TAACCACTCAAGAA--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACACAAATCTT-
--TTCTAATCTAT
A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CACACAAATCTT-
GTCATCAATCATT
A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CACACAAATCTT
AGCGGCACACACGCAA-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CACACAAATCTT--
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C