Information for 24-CCAGCAATGGAC (Motif 33)

A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C T G A G T C A C G T A C T G A C T G
p-value:1e-1
log p-value:-3.964e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 50.6bp
Average Position of motif in Background149.3 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)11.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCAGCAATGGAC
VRAACAATGG--
A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCAGCAATGGAC
-GAACAATGG--
A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCAGCAATGGAC
-GAACAATGGN-
A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCAGCAATGGAC
CCWGGAATGY--
A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAGCAATGGAC
-AAACAATGGCA
A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAGCAATGGAC
-AAACAATGGAA
A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

SOX14/MA1562.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATGGAC
CCGAACAATG---
A C G T A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G A C G T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGCAATGGAC
VVRRAACAATGG--
A C G T A C G T A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCAGCAATGGAC
--GGYAATGAAA
A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C
A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAGCAATGGAC--
AATGAACAATGGAATT
A C G T A C G T A G T C A G T C C G T A A C T G A G T C C G T A C G T A A C G T A C T G A C T G C G T A A G T C A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T