Information for 1-AGTACAAGTGAT (Motif 1)

C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T
Reverse Opposite:
C G T A A C G T G A T C G T C A G T A C G A C T C G A T A C T G A C G T G T C A A G T C C G A T
p-value:1e-24
log p-value:-5.562e+01
Information Content per bp:1.911
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.4 +/- 43.6bp
Average Position of motif in Background107.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGTACAAGTGAT
DGCACACGTG--
C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T
C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T

TFE3/MA0831.2/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGTACAAGTGAT
----CACGTGAC
C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGTACAAGTGAT
--KCCACGTGAC
C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T
A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTACAAGTGAT--
NNNNTGCCAGTGATTG
A C G T A C G T C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTACAAGTGAT
--NTCAAGTGGN
C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTACAAGTGAT---
AAAATACATGTAATACT
A C G T A C G T C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTACAAGTGAT---
AATATACATGTAATATA
A C G T A C G T C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGTACAAGTGAT---
AATATACATGTAAAACA
A C G T A C G T C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGTACAAGTGAT-
---NCACGTGACN
C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T A C G T
A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGTACAAGTGAT
--NTCAAGTGG-
C G T A T A C G A C G T C G T A T A G C C G T A C G T A A C T G C A G T C A T G G T C A A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T