Information for 10-AGTGAACCAGGG (Motif 14)

C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T
p-value:1e-3
log p-value:-9.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGTGAACCAGGG---
NNAGGGACAAGGGCNC
A C G T C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGAACCAGGG
NTTTTAGTTAACNNAGN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

VDR/MA0693.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGTGAACCAGGG
--TGAACTCA--
C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G
A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGTGAACCAGGG
NNNTTAGTTAACTNANN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAACCAGGG--
NNNNTGACCCGGCGCG
A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGTGAACCAGGG-
---GAACAATGGN
C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

PRDM4/MA1647.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGTGAACCAGGG
-NAGAAACAGNN
C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G
A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

FOXN3/MA1489.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTGAACCAGGG
-GTAAACAA---
C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G
A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAACCAGGG-
SCAGYCADGCATGAC
A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AGTGAACCAGGG--
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T