Information for 19-GGGCCACTCG (Motif 32)

A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C G T A C T G A C T G A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.514e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets111.0 +/- 0.0bp
Average Position of motif in Background79.1 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGGCCACTCG
CCCTGGGGCCAGG--
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGCCACTCG-
-AASCACTCAA
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGCCACTCG-
-AGCCAATCGG
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GGGCCACTCG--
--NSCACTYVAV
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCACTCG-
NTGGCCAATGAG
A C G T A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGCCACTCG--
--RSCACTYRAG
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGGCCACTCG----
TAACCACTCAAGAA
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGCCACTCG-
-MRSCACTYAA
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGCCACTCG-
-GTACACTCAC
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGCCACTCG--
-AGCCACTCAAG
A C T G A C T G A C T G A G T C A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G