Information for 18-AATTTTTGTCAA (Motif 19)

C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-9.590e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background24.9 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0067.1_Sox18_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATTTTTGTCAA-
TTCAATTGTTCTAAAA
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATTTTTGTCAA-
TAATTGTTCTAAAC
A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AATTTTTGTCAA
-----NTGTCAN
C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:AATTTTTGTCAA-
-----YTGWCADY
C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AATTTTTGTCAA
----CCTGTCAA
C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AATTTTTGTCAA--
------TGTCANYT
C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATTTTTGTCAA---
-TTTTTTTTCNNGTN
C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATTTTTGTCAA
TATAAGTAGGTCAA
A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATTTTTGTCAA
AAAATTGTTATGAA
A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AATTTTTGTCAA---
ANATTTTTGCAANTN
C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G