| p-value: | 1e-2 |
| log p-value: | -6.901e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 8.2 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 19.0 +/- 0.0bp |
| Average Position of motif in Background | 140.3 +/- 24.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0073.1_Hoxc9/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATAACT--- GGAGGTCATTAATTAT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGTCATAACT AGGTCA----- |
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|
RXRB(var.2)/MA1555.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATAACT-- GAGGTCATGACCTC |
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|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATAACT CGAGGTCAC---- |
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|
|
RXRG(var.2)/MA1556.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCATAACT-- GAGGTCATGACCTC |
|
|
|
PH0012.1_Cdx1/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATAACT--- TAAGGTAATAAAATTA |
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|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCATAACT GAGGTCAT---- |
|
|
|
NR1H4/MA1110.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATAACT NAGGTCATTGA- |
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|
|
PH0013.1_Cdx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATAACT--- AAAGGTAATAAAATTT |
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|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATAACT AGRGGTCA----- |
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