Information for 9-TAATTGGTCTTC (Motif 14)

A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A
p-value:1e-4
log p-value:-9.283e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0107.1_Msx2/Jaspar

Match Rank:1
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----TAATTGGTCTTC
ANCGCTAATTGGTCTNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TAATTGGTCTTC
NNNTTAATTGGTTTTT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TAATTGGTCTTC
NNNTTAATTGGTTTTN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGGTCTTC
NNTAATTGGNN---
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:5
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TAATTGGTCTTC
GNNTTAATTGGTTGTT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

Nobox/MA0125.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TAATTGGTCTTC
TAATTGGT----
A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGTCTTC
NTAATTGG-----
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:8
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGTCTTC
NTAATTGG-----
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATTGGTCTTC
GCTAATTAGN----
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAATTGGTCTTC
NTAATTGN-----
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A G T C
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T A C G T