Information for 18-CACCTACTTTGA (Motif 17)

A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.830e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background23.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CACCTACTTTGA
CACCTACTAT--
A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CACCTACTTTGA---
----TCCTTTGATGT
A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CACCTACTTTGA--
RGMCCTACTRTGTGC
A C G T A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CACCTACTTTGA------
-NNTTCCTTTGATCTANA
A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACCTACTTTGA
BTGACCTAVTTW--
A C G T A C G T A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CACCTACTTTGA---
-----CCTTTGATGT
A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACCTACTTTGA
CGCACCTGCCG---
A C G T A C G T A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G A C G T A C G T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACCTACTTTGA
TRCACCTGCY----
A C G T A C G T A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A
A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CACCTACTTTGA---
-----CCTTTGATST
A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

TCF3/MA0522.3/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACCTACTTTGA
CGCACCTGCCC---
A C G T A C G T A G T C C G T A A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C A C G T A C G T A C G T