Information for 21-GAGACAGCCTAT (Motif 21)

A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C T G A C G T A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.075e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGACAGCCTAT
NAGAAACAGNN---
A C G T A C G T A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGACAGCCTAT
--CACAGN----
A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGACAGCCTAT
GGAACAGCCG--
A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGACAGCCTAT
NAGAGAAAGNA---
A C G T A C G T A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T A C G T

MAFG/MA0659.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGACAGCCTAT---
GAGTCAGCATTTTTT
A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G T A T A C G C G A T G T A C C G T A A C T G G A T C C G T A C G A T G C A T G C A T G A C T G A C T G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGACAGCCTAT
CCAGACAG-----
A C G T A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGACAGCCTAT
GGGAACAGCCAC-
A C G T A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGACAGCCTAT
---BCAGACWA-
A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGACAGCCTAT---
GATAACATCCTAGTAG
A C G T A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

ZNF317/MA1593.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGACAGCCTAT-
-TAACAGCAGACT
A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G T C A G T C A C G T C G T A A C G T A C G T
A C G T C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T