Information for 17-GCTCCTATTATA (Motif 21)

A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A
Reverse Opposite:
A C G T C G T A A G C T C G T A C G T A C G A T T G C A A C T G A C T G C T G A A C T G A G T C
p-value:1e-8
log p-value:-1.863e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets123.6 +/- 51.4bp
Average Position of motif in Background115.4 +/- 41.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTCCTATTATA
GCTCCG------
A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTCCTATTATA----
TGTTCCCATTGTGTACT
A C G T A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCTATTATA-
NNNNNNCTTTTATAN
A C G T A C G T A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTCCTATTATA-
NNNNNNCTTTTATAN
A C G T A C G T A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PB0174.1_Sox30_2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTCCTATTATA------
--NCGTATTATAATCNTA
A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCTCCTATTATA---
---CCTTTTATAGNC
A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

SOX15/MA1152.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCTCCTATTATA--
----CTATTGTTTT
A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTCCTATTATA
-CACCTACTAT-
A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A
A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTCCTATTATA------
--NANTATTATAATTNNN
A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTCCTATTATA
CTGCCWVCTTTTRTA
A C G T A C G T A C G T A C T G A G T C A G C T A G T C G T A C A C G T C G T A A C G T A C G T C T G A A C G T C G T A
A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A