Information for 19-ACAGATCCACTA (Motif 21)

C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.057e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ACAGATCCACTA
----ATCCAC--
C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACAGATCCACTA-
-SSAATCCACANN
C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Isl1/MA1608.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ACAGATCCACTA---
----ATCCATTAGCA
C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACAGATCCACTA
ACCAGATGGC---
A C G T C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAGATCCACTA------
--TAAGCCACTTGAATTT
C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACAGATCCACTA------
--TAAGCCACTTAACATT
C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACAGATCCACTA
-ATAATCCC---
C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACAGATCCACTA
NNGACAGGTGCNN--
A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACAGATCCACTA
AAACAGATGTTTA-
A C G T A C G T C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACAGATCCACTA
GGACACACCCCC--
A C G T A C G T C G T A A G T C C G T A A C T G C G T A A C G T A G T C A G T C C G T A A G T C A C G T C G T A
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T