Information for 18-CGCTAGTCTG (Motif 35)

A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C T G
p-value:1e-3
log p-value:-7.493e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background168.1 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CGCTAGTCTG-
---TWGTCTGV
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGCTAGTCTG-
-VBSYGTCTGG
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGCTAGTCTG-
---CTGTCTGG
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

GATA1/MA0035.4/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGCTAGTCTG-
TTCTAATCTAT
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T
C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCTAGTCTG---
GGGGCTYGKCTGGGA
A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGCTAGTCTG----
----GGTCTGGCAT
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGCTAGTCTG------
NNTNNTGTCTGGNNTNG
A C G T A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCTAGTCTG
-GCTAATCC-
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

OSR1/MA1542.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCTAGTCTG
TGCTACTGTT
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G
G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CGCTAGTCTG------
----TGTCTGDCACCT
A G T C A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T