Information for 11-CAAGCAGCAG (Motif 23)

A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G C T A T C G A G T C C G A T A G C T A C T G
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.881
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif252.4
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets117.9 +/- 50.1bp
Average Position of motif in Background99.5 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAAGCAGCAG---
--CACAGCAGGGG
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAAGCAGCAG--
--AGCAGCTGCT
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAAGCAGCAG--
--TGCSGCANTN
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T
A C G T A C G T A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAGCAGCAG
--ANCAGCTG
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAAGCAGCAG--
NNTGTAGGTAGCANNT
A C G T A C G T A C G T A C G T A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAAGCAGCAG----
--AGCAGCTGCTNN
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

ZNF317/MA1593.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAGCAGCAG---
-TAACAGCAGACT
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

MYOG/MA0500.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAAGCAGCAG---
-NNGCAGCTGCNN
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T A C G T
A C G T T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAGCAGCAG-
-CAGCAGCTGN
A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CAAGCAGCAG--
NNNTTAGGTAGCNTNT
A C G T A C G T A C G T A C G T A G T C T C G A C G T A A C T G A T G C C T G A A C T G G T A C C G T A A C T G A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T