Information for 6-CACTCGTAGTCC (Motif 7)

A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G A T C G T A A T G C A C T G C G T A A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.753e+01
Information Content per bp:1.955
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.2 +/- 40.4bp
Average Position of motif in Background123.7 +/- 50.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACTCGTAGTCC
CCACTTGAA----
A C G T A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CACTCGTAGTCC
AASCACTCAA-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CACTCGTAGTCC----
NNANTGGTGGTCTTNNN
A C G T A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CACTCGTAGTCC
MRSCACTYAA-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CACTCGTAGTCC
RSCACTYRAG----
A C G T A C G T A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CACTCGTAGTCC-
-----CTAATCCC
A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

PITX2/MA1547.1/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CACTCGTAGTCC-
-----ATAATCCC
A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C

MSANTD3/MA1523.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CACTCGTAGTCC
GTACACTCAC-----
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CACTCGTAGTCC-
-ACTACAATTCCC
A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C A C G T
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

OTX2/MA0712.2/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CACTCGTAGTCC---
---NNCTAATCCCNN
A G T C C G T A A G T C A C G T A G T C A T C G A C G T C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T