Information for 1-AAGCGTAGCC (Motif 6)

C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A A G T C A C T G A G T C A C G T A C G T
p-value:1e-4
log p-value:-9.751e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGCGTAGCC--
CAAAGGCGTGGCCAG
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

PAX5/MA0014.3/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGCGTAGCC--
GAGCGTGACCCC
C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGCGTAGCC
CAAGCTT----
A C G T C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGCGTAGCC
NACAGTAGCN
C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGCGTAGCC---
ATGTACAGTAGCAAAG
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

ZSCAN29/MA1602.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGCGTAGCC-
NCNGTGTAGACG
A C G T C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGCGTAGCC---
ATTTACAGTAGCAAAA
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0094.1_Zfp128_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAGCGTAGCC---
TCTTTGGCGTACCCTAA
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAGCGTAGCC
---CGGAGC-
C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGCGTAGCC--
-TGCGTGGGCGT
C G T A C G T A A C T G A G T C A C T G A C G T C G T A A C T G A G T C A G T C A C G T A C G T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T