Information for 2-TCAGAAAC (Motif 4)

A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C
Reverse Opposite:
A T C G A C G T A C G T A C G T A T G C A C G T A C T G C T G A
p-value:1e-5
log p-value:-1.170e+01
Information Content per bp:1.859
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif63.64%
Number of Background Sequences with motif7384.5
Percentage of Background Sequences with motif8.58%
Average Position of motif in Targets118.0 +/- 50.4bp
Average Position of motif in Background100.4 +/- 78.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TCAGAAAC----
-NAGAAACAGNN
A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCAGAAAC-
GTCATAAAAN
A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCAGAAAC--
ACTGAAACCA
A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCAGAAAC--
AAAACAAAGAA
A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

PB0148.1_Mtf1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCAGAAAC---
AAATAAGAAAAAAC
A C G T A C G T A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T A C G T
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TCAGAAAC--
AAAAATAACAAACGG
A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCAGAAAC--
NGYCATAAAWCH
A C G T A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCAGAAAC--
RHHCAGAGAGGB
A C G T A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

Stat2/MA1623.1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCAGAAAC-
AGAAACAGAAACT
A C G T A C G T A C G T A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

OSR2/MA1646.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCAGAAAC--
AAACAGAAGCAG
A C G T A C G T A G C T G T A C C G T A A T C G C G T A C G T A C G T A A T G C A C G T A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G