Information for 3-ACCCAGAGCAGG (Motif 5)

C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T A C T G A C T G A C T G A C G T
p-value:1e-4
log p-value:-1.039e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic2/MA1629.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCCAGAGCAGG---
-CTCACAGCAGGGGG
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACCCAGAGCAGG---
---CACAGCAGGGGG
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ACCCAGAGCAGG--
---CACAGCAGGGG
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACCCAGAGCAGG---
---CHCAGCRGGRGG
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACCCAGAGCAGG---
CCACACAGCAGGAGA
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACCCAGAGCAGG-----
--DCHCAGCAGGRGGCC
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACCCAGAGCAGG---
CCACACAGCAGGAGA
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACCCAGAGCAGG---
GAGCACAGCAGGACA
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACCCAGAGCAGG---
GCACAYAGTAGGKCY
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACCCAGAGCAGG
RHHCAGAGAGGB
C G T A A G T C A G T C A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G