Information for 16-AATACAATGGTT (Motif 22)

C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.542e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background93.5 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AATACAATGGTT
-AAACAATGGAA
C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AATACAATGGTT
-AAACAATGGCA
C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AATACAATGGTT
VRAACAATGG--
C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATACAATGGTT
AAAACAATGG--
C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATACAATGGTT
-RAACAATGGN-
C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

SOX15/MA1152.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AATACAATGGTT
AAAACAATAG--
C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AATACAATGGTT
VVRRAACAATGG--
A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AATACAATGGTT
ATTTGCATACAATGG--
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATACAATGGTT-
CTCACACAATGGCGC
A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AATACAATGGTT
-GAACAATGG--
C G T A C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T