Information for 8-CTGTTAGGTCTA (Motif 12)

A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
Reverse Opposite:
A C G T C G T A C T A G C G T A A G T C A G T C A C G T C G T A C G T A A G T C C G T A A T C G
p-value:1e-9
log p-value:-2.264e+01
Information Content per bp:1.920
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.4 +/- 44.5bp
Average Position of motif in Background123.5 +/- 50.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX12/MA1561.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTAGGTCTA
NATTGTTCGGT---
A C G T A C G T A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGTTAGGTCTA-
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGTTAGGTCTA
---TRAGGTCA-
A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CTGTTAGGTCTA
-----AGGTCA-
A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGTTAGGTCTA
----GAGGTCAT
A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
A C G T A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTAGGTCTA
BRRCVGTTDN-----
A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTAGGTCTA
NCTGATTGGNN--
A C G T A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGTTAGGTCTA
NCNTTTGTTATTTNN-
A C G T A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTGTTAGGTCTA-
--CAAAGGTCAAA
A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A A C G T
A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

OVOL2/MA1545.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGTTAGGTCTA
GTACCGTTATGTG--
A C G T A C G T A C G T A T G C A C G T A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G A T C G T A
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G A C G T A C G T