Information for 3-CGAAGGTT (Motif 37)

A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C A C G T A C G T A G T C A C T G
p-value:1e-2
log p-value:-5.485e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif45.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background92.6 +/- 79.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CGAAGGTT-----
TCGCGAAGGTTGTACT
A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CGAAGGTT-
--AAGCTTG
A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGAAGGTT
NGAAGC--
A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGAAGGTT--
NBYCAAGGTCAC
A C G T A C G T A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGAAGGTT--
TCAAGGTCAT
A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGAAGGTT---
CAAAGGTCAAA
A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGAAGGTT--
TCAAGGTCAN
A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

NR5A1/MA1540.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGAAGGTT--
GTCAAGGTCAC
A C G T A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGAAGGTT
NNATAAGGNN
A C G T A C G T A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

PB0014.1_Esrra_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGAAGGTT------
TATTCAAGGTCATGCGA
A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A