Information for 11-ATTTATTACTTG (Motif 15)

C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A A C G T
p-value:1e-3
log p-value:-9.049e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTACTTG
NTTTTATTGCNN-
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTACTTG
NTTTTATTACN--
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTACTTG
NTTTTATGAC---
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATTTATTACTTG-
GAAAATTAATTACTTCG
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATTACTTG-
NAATTTTATTACCNNN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTACTTG
NTTTCATTRCHD-
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G
C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTACTTG
NTTTTATTGC---
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T A C G T A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATTTATTACTTG-
GAAAATTAATTACTTTG
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ATTTATTACTTG
TNAATTTTATTACCTN
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0028.1_En1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATTACTTG--
GNATTAATTAGTTNNC
A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C