Information for 4-TCTGCCATATTG (Motif 4)

A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
Reverse Opposite:
A G T C C T G A C T G A C G A T C G T A A C G T A C T G A C T G A G T C C G T A A C T G C T G A
p-value:1e-4
log p-value:-1.033e+01
Information Content per bp:1.805
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif138.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets78.3 +/- 49.8bp
Average Position of motif in Background95.3 +/- 85.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TCTGCCATATTG
GCNGCCATCTTG
A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

ZFP42/MA1651.1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGCCATATTG----
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G A C G T A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCTGCCATATTG
GCCGCCATCTTG
A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTGCCATATTG
CGTGCCAAG---
A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTGCCATATTG
-CTGCCCGCA--
A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCCATATTG
TACGCCCCGCCACTCTG
A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTGCCATATTG
GGTGCCAAGT--
A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

YY2/MA0748.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCCATATTG
CGCCGCCATNN--
A C G T A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCTGCCATATTG
HWWGTCAGCAWWTTT-
A C G T A C G T A C G T A C G T A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTGCCATATTG
-TTGCCAAG---
A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T