Information for 5-CBTAACAAGGAT (Motif 5)

A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A G C T C G A T A C T G A C G T A C G T C T G A T A C G A C T G
p-value:1e-7
log p-value:-1.706e+01
Information Content per bp:1.812
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif65.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets97.3 +/- 47.6bp
Average Position of motif in Background98.5 +/- 72.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CBTAACAAGGAT------
--CTACTAGGATGTNNTN
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CBTAACAAGGAT--
----ANCAGGATGT
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:CBTAACAAGGAT---
-------NGGATTAN
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

OTX2/MA0712.2/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CBTAACAAGGAT-----
-----AAGGGATTAGAA
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CBTAACAAGGAT-----
------AAGGATATNTN
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CBTAACAAGGAT-----
--AAAAACGGATTATTG
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CBTAACAAGGAT----
------VRGGATTARN
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0044.1_Homez/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CBTAACAAGGAT-----
NNTAAAAACGATGTTNT
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PH0125.1_Obox5_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CBTAACAAGGAT--------
---NANAGGGATTAATTATN
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

Dmbx1/MA0883.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CBTAACAAGGAT-------
--TGAACCGGATTAATGAA
A G T C A C G T A G C T G T C A C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A