Information for 13-ATAGTAACCC (Motif 32)

C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.344e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background93.6 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATAGTAACCC
NTAGCAACG-
C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATAGTAACCC-
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

RFX1/MA0509.2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----ATAGTAACCC
TNCCATAGCAACNN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ATAGTAACCC
TGACCTNTAGTAACCC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

RFX3/MA0798.2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATAGTAACCC
TNCCATAGCAACNN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATAGTAACCC
SCCTAGCAACAG
A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATAGTAACCC-
TACCATAGCAACGGT
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------ATAGTAACCC-----
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATAGTAACCC
ACTAGTTAAC-
A C G T C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATAGTAACCC--------
---TTAACCCTTTVNKKN
C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C