Information for 7-TGTCTACTTAAH (Motif 7)

C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
Reverse Opposite:
C G T A C G A T G C A T C G T A C T G A A T C G A G C T C T G A A C T G C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.044e+01
Information Content per bp:1.756
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif70.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets87.0 +/- 15.0bp
Average Position of motif in Background105.4 +/- 74.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGTCTACTTAAH
TWGTCTGV-----
A C G T C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGTCTACTTAAH
VBSYGTCTGG-----
A C G T A C G T A C G T C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGTCTACTTAAH
CTGTCTGG-----
A C G T C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

FOXD2/MA0847.2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTACTTAAH
TTGTTTACTTAAN
A C G T C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
C G A T G C A T C T A G G C A T A C G T A C G T C T G A A G T C C G A T A G C T C G T A C T G A A T G C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTCTACTTAAH
TGTTTACTTT--
C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTACTTAAH
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTCTACTTAAH
TGTCTAGA----
C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTCTACTTAAH
TGTTTACTTT--
C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTCTACTTAAH---
CTTAACCACTTAAGGAT
A C G T A C G T C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

FOXE1/MA1487.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTACTTAAH-
NTTGTTTATTTAAGG
A C G T A C G T C G A T A C T G A C G T A G T C A G C T C T G A A T G C A G C T A C G T C G T A C G T A G A C T A C G T
C T G A G C A T A G C T A C T G A C G T A C G T A C G T C T G A A G C T G C A T A G C T C G T A T C G A A C T G T A C G