Information for 6-WCACAACACACA (Motif 7)

C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A T C G C G A T C A T G C G A T C G A T C T A G C G A T C A T G C G A T
p-value:1e-10
log p-value:-2.529e+01
Information Content per bp:1.682
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif6.39%
Number of Background Sequences with motif1286.5
Percentage of Background Sequences with motif2.68%
Average Position of motif in Targets98.1 +/- 48.0bp
Average Position of motif in Background97.4 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:WCACAACACACA-----
-AGCGGCACACACGCAA
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WCACAACACACA
-TCCAATCCACA
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:WCACAACACACA---
----AAACCACAGAN
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:WCACAACACACA-----
-CGAAGCACACAAAATA
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:WCACAACACACA---
---NWAACCACADNN
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.60
Offset:6
Orientation:forward strand
Alignment:WCACAACACACA----
------GACACATGGC
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:WCACAACACACA--
----AAACCACAGC
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---WCACAACACACA--
NNNVCTGWGYAAACASN
A C G T A C G T A C G T C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WCACAACACACA-------
----CTCACACAATGGCGC
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:WCACAACACACA--
----AAACCACANN
C G T A G T A C C G T A G A T C G C T A G C T A G T A C C G T A A T G C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A