Information for 1-CAAAAAAGTTTA (Motif 1)

A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
Reverse Opposite:
A C G T C T G A T G C A G T C A A G T C A G C T A G C T A C G T A C G T A G C T A C G T C T A G
p-value:1e-7
log p-value:-1.617e+01
Information Content per bp:1.764
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif356.5
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets143.5 +/- 41.1bp
Average Position of motif in Background107.3 +/- 83.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CAAAAAAGTTTA-
----AAAGTTCAT
A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CAAAAAAGTTTA
----TGAGTTCA
A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A

GRHL2/MA1105.2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAAAAGTTTA
AAAACAGGTTTT
A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

ZNF652/MA1657.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAAAAAAGTTTA-
-GAAAGAGTTAAA
A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A A C G T
A C G T A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAAAAAAGTTTA
AAAACCGGTTTT
A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CAAAAAAGTTTA
CAATTGCAAAAATAT---
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAAAAAAGTTTA-
---CAAAGKTCAA
A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A A C G T
A C G T A C G T A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CAAAAAAGTTTA
RHHCAGAGAGGB---
A C G T A C G T A C G T A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CAAAAAAGTTTA
-AAACCGGTTT-
A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAAAAAAGTTTA
GATACAAAGTATC
A C G T A G T C C G T A C T G A G T C A G T C A C T G A C T G A C T A G A C G T A C G T G A C T G T C A
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C