Information for 7-AAATRGGAGYSC (Motif 8)

G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C
Reverse Opposite:
C T A G A T G C T C A G T A G C A G C T A G T C G T A C A G T C C G T A C G A T A C G T C G A T
p-value:1e-6
log p-value:-1.574e+01
Information Content per bp:1.708
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif403.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets108.8 +/- 63.4bp
Average Position of motif in Background96.8 +/- 78.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AAATRGGAGYSC
NNTNNACAATGGGANNN-
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAATRGGAGYSC-
TGWAAYCTGABACCB
A C G T A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAATRGGAGYSC
GWAAYHTGABMC-
A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAATRGGAGYSC
CCAAAAATAG------
A C G T A C G T A C G T A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAATRGGAGYSC
GGAGAAAGGTGCGA
A C G T A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAATRGGAGYSC---
TATTATGGGATGGATAA
A C G T A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAATRGGAGYSC---
NNNATTGGGGGTNTCCT
A C G T A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAATRGGAGYSC
GWAAYHTGAKMC-
A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAATRGGAGYSC----
NTNNNAGGAGTCTCNTN
A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AAATRGGAGYSC
KCCAAAAATAGC-----
A C G T A C G T A C G T A C G T A C G T G C T A G T C A C G T A C G A T C T A G A C T G A C T G C T G A A C T G A G C T T A C G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T