Information for 15-CTGGGTTAGATC (Motif 17)

A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T C G T A C G T A A G T C A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGTTAGATC-
GYCTGGYYTNTGTCA
A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTGGGTTAGATC
TTGCCCGGATTAGG--
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGGTTAGATC
-NGGATTAN---
A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTGGGTTAGATC
--GGATTAGC--
A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGGGTTAGATC
AAGGGATTAGAA-
A C G T A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGGGTTAGATC
NGGGATTA----
A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGGGTTAGATC---
TATCATTAGAACGCT
A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGGGTTAGATC
-GGGATTANN--
A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGGGTTAGATC
-AGGGTAACAGC
A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGGGTTAGATC
WDNCTGGGCA-----
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G C G T A A C G T A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T