Information for 13-AAACTCTGTCAC (Motif 18)

C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T
p-value:1e-4
log p-value:-9.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background132.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AAACTCTGTCAC
----CCTGTCAA
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AAACTCTGTCAC
----GCTGTCAA
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AAACTCTGTCAC
-----NTGTCAN
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAACTCTGTCAC-
---VGCTGWCAVB
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C G T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAACTCTGTCAC--
--TGTCTGDCACCT
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAACTCTGTCAC
WAABTAGGTCAV
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAACTCTGTCAC
-AAYTAGGTCA-
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAACTCTGTCAC
-AAYTAGGTCA-
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAACTCTGTCAC-----
--NNGCTGTCACTCANN
C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

Dmrt1/MA1603.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAACTCTGTCAC
GNTACTTTGTATC
A C G T C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C G T A G T C C G T A A G T C
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C