Information for 14-AAGCTGGGAAAT (Motif 18)

C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.819e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background159.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAGCTGGGAAAT
--CCTGGGAAAG
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T
A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PB0115.1_Ehf_2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGCTGGGAAAT----
AAGATCGGAANTNNNA
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAGCTGGGAAAT
--CSTGGGAAAD
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGCTGGGAAAT
WDNCTGGGCA--
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGCTGGGAAAT
AAGGTGTKAA--
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAGCTGGGAAAT
RGSMTBCTGGGAAAT
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAGCTGGGAAAT--
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

ZNF75D/MA1601.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGCTGGGAAAT
-ATGTGGGAAA-
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T
A C G T T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGCTGGGAAAT-
AAGGTGTGAAAAT
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

RELB/MA1117.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGCTGGGAAAT--
---NNGGGGAATNC
C G T A C G T A A C T G A G T C A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C