Information for 7-AAGTGTACGA (Motif 25)

C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T C G T A A G T C C G T A A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.729e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background116.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0077.1_Hoxd12/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTACGA-----
NNNATTTTACGACNNTN
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGTACGA-----
ANATTTTACGAGNNNN
A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAGTGTACGA--
ANTTTTACGACC
C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTACGA
NTCAAGTGG----
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTACGA-----
GNNNTTTTACGACCTNA
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGTACGA
NTCAAGTGGN---
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGTACGA------
TTNGGGTACGCCNNANN
A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGTACGA-----
NAATTTTACGAGNTNN
A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXB9/MA1503.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGTGTACGA-
-NTTTTACGAC
C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T
A C G T C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGTACGA-----
ANNATTTTACGACNTNA
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A