Information for 5-TGAACTTACG (Motif 11)

A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-8.118e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background124.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGAACTTACG
TGAACTCA--
A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGAACTTACG
ATGAACTTT--
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGAACTTACG
TTGAMCTTTG-
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAACTTACG
GTGACCTT---
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAACTTACG
NNTGACCTTTN-
A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAACTTACG
TGACCTYA--
A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

ETV5/MA0765.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGAACTTACG--
-CCACTTCCGGC
A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T
A C G T A T G C A T G C T C G A A T G C G A C T A G C T A T G C A T G C A C T G A T C G A G T C

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGAACTTACG---
---ACTTCCGGTT
A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGAACTTACG--
--CACTTCCGCT
A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T
A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGAACTTACG---
---ACTTCCGGNT
A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T