Information for 3-ACTCGAAAGC (Motif 5)

C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C G T A G T C A C T G C G T A A C T G A C G T
p-value:1e-4
log p-value:-9.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BCL6/MA0463.2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----ACTCGAAAGC--
NATTCCTCGAAAGCAN
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C G T A C G T
G T C A C T G A G C A T G A C T T G A C G A T C C G A T T G A C T C A G C G T A T G C A C G T A C A T G G A T C C T G A C G A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACTCGAAAGC-
ATAACCACTTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ACTCGAAAGC
NNNATTCCTCGAAAGN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

BCL6B/MA0731.1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------ACTCGAAAGC-
TGAATTCCTAGAAAGCA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACTCGAAAGC---
CGTATCGAAACCAAA
A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTCGAAAGC--
ATAAACCGAAACCAA
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACTCGAAAGC-
-ACTGAAACCA
C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTCGAAAGC
CCACTTGAA---
A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGAAAGC
VSCACATCAAAG-
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTCGAAAGC--
CAAAATCGAAACTAA
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A