Information for 16-GTRGYCACAG (Motif 28)

C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G
Reverse Opposite:
A G T C A C G T A T C G A C G T C A T G T C G A A G T C A G C T C T G A G A T C
p-value:1e-5
log p-value:-1.232e+01
Information Content per bp:1.751
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.42%
Number of Background Sequences with motif1486.2
Percentage of Background Sequences with motif3.10%
Average Position of motif in Targets98.3 +/- 50.1bp
Average Position of motif in Background99.6 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTRGYCACAG--
-AAACCACAGAN
C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTRGYCACAG-
-AAACCACAGC
C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GTRGYCACAG-
-----CACAGN
C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTRGYCACAG
NAAACCACAG
C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTRGYCACAG-
GGTGYTGACAGS
A C G T C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTRGYCACAG
CYWSTGGTCARA-
A C G T A C G T A C G T C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTRGYCACAG--
NWAACCACADNN
C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTRGYCACAG-
-AAACCACANN
C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTRGYCACAG
SCCTAGCAACAG
A C G T A C G T C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

RFX7/MA1554.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTRGYCACAG
NTAGCAACG-
C T A G A G C T C T G A C T A G A G C T G T A C C G T A A T G C C G T A C T A G
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T