Information for 20-GGTTATGACT (Motif 35)

A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.719e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif25.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background87.4 +/- 109.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGTTATGACT--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T C A G T C G A C A T G A C T G A C G T A G T C T C G A G A C T T C A G T G C A G T A C G A T C G A C T A G T C

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTTATGACT--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGTTATGACT--
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

HOXA9/MA0594.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTTATGACT
NNTTTACGAC-
A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C A C G T

BATF3/MA0835.2/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGTTATGACT----
---TATGACTCATA
A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G T C A G C A T C A T G G C T A A T G C C G A T G T A C C G T A C G A T G C T A

BATF::JUN/MA0462.2/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGTTATGACT----
---TATGACTCATA
A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T G C A G C A T C A T G C T G A A T G C C G A T G T A C C G T A C A G T G C T A

RARG(var.3)/MA1553.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGTTATGACT--
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGTTATGACT-----
--TGATGACTCATCC
A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T C G A A G C T C A T G C G T A A G T C C A G T G T A C C T G A A G C T G T A C T G A C

BATF/MA1634.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGTTATGACT----
---TATGACTCATA
A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T G C A G C A T C A T G C G T A A T G C C G A T G T A C C G T A C A G T G C T A

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGTTATGACT-----
--TGATGACTCATAC
A C T G A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G T C G A C G A T C A T G C G T A A T G C C A G T G T A C C T G A A G C T T G C A G T A C