Information for 23-CATGGTATAC (Motif 41)

A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T C T G A A G T C A G T C C G T A A C G T A C T G
p-value:1e-2
log p-value:-5.369e+00
Information Content per bp:1.965
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif17.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets90.2 +/- 52.3bp
Average Position of motif in Background92.3 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)-3.2
Multiplicity (# of sites on avg that occur together)3.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATGGTATAC----
CCATTGTATGCAAAT
A C G T A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

FOXN3/MA1489.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CATGGTATAC
--TTGTTTAC
A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATGGTATAC
CCWGGAATGY
A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CATGGTATAC
NNCCATTGTNN--
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATGGTATAC-
-CTGGAATGYA
A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C A C G T
A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CATGGTATAC-
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

NFIC/MA0161.2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATGGTATAC
TACTTGGCAGA-
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CATGGTATAC
NNCCATTGTNN--
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CATGGTATAC
--TGGAATGT
A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C
A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CATGGTATAC-------
CATACAATACGAAATAA
A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A