Information for 20-AGGATYGCAGTS (Motif 26)

G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
Reverse Opposite:
T A C G G C T A A T G C C G A T C A T G A T G C T C G A C G T A G C A T G T A C G A T C C A G T
p-value:1e-3
log p-value:-8.175e+00
Information Content per bp:1.606
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif2533.0
Percentage of Background Sequences with motif4.22%
Average Position of motif in Targets72.6 +/- 58.4bp
Average Position of motif in Background99.8 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGATYGCAGTS
NGGATTAN----
G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGGATYGCAGTS-----
NNNANTGCAGTGCNNTT
G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGGATYGCAGTS----
NNNNTGCCAGTGATTG
G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGGATYGCAGTS-
NNAAGGGATTAACGANT
A C G T A C G T A C G T A C G T G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGGATYGCAGTS
----TGTCGGTT
G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
A C G T A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGGATYGCAGTS
ANCAGGATGT-----
A C G T A C G T A C G T G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGGATYGCAGTS
NGGGATTA-----
A C G T G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGGATYGCAGTS
VRGGATTARN---
A C G T G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGGATYGCAGTS
NGGATTAN----
G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AGGATYGCAGTS
AAGGGATTAGAA--
A C G T A C G T G C T A C T A G A C T G C G T A C G A T A G C T A T C G G T A C C G T A T A C G C A G T A T G C
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T A C G T