Information for 3-CATBCATCCAAG (Motif 3)

G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A C T G A C T G C G T A C G A T A C T G T C G A G T C A C G A T A C T G
p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.782
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif691.8
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets113.5 +/- 62.3bp
Average Position of motif in Background105.4 +/- 78.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat5a/MA1624.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CATBCATCCAAG----
----TTTCCAAGAAAT
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G A C T C G A T G T A C G A T C G C T A C T G A A C T G C G T A C T G A G C T A G A C T

TCF7/MA0769.2/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CATBCATCCAAG--
---ANATCAAAGNN
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CATBCATCCAAG--
SCAGYCADGCATGAC
A C G T G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATBCATCCAAG--
---NNTGCCAAGNN
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATBCATCCAAG--
NNCATTCATTCATNNN
A C G T A C G T G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CATBCATCCAAG-----
NNNAGATCAAAGGANNN
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATBCATCCAAG-----
TATAGATCAAAGGAAAA
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATBCATCCAAG-----
NANAGATCAAAGGGNNN
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CATBCATCCAAG--
---ATTTCCAAGAA
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CATBCATCCAAG---
----TTTCCCAGAAN
G T A C C G T A A C G T A C G T G T A C C G T A C G A T A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G