Homer de novo Motif Results (motif_results/SRR15726145//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 9
Total background sequences = 59000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * C G T A C G A T A T C G A G C T A C G T A T G C G T A C G T C A C A G T C G A T A C T G C T A G 1e-8-2.059e+0177.78%3.19%47.4bp (75.6bp)RFX1/MA0509.2/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
2 * A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C 1e-6-1.560e+0133.33%0.13%6.1bp (80.9bp)PB0163.1_Six6_2/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
3 * C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T 1e-5-1.360e+0144.44%1.01%50.3bp (79.1bp)BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer(0.645)
More Information | Similar Motifs Found
motif file (matrix)
4 * A T C G C G T A A C G T T G A C A T G C A T C G A C G T A C G T A C G T A C G T A C G T A C T G 1e-5-1.356e+0133.33%0.25%58.0bp (75.4bp)PH0044.1_Homez/Jaspar(0.618)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C 1e-4-1.059e+0133.33%0.68%62.0bp (74.9bp)Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer(0.606)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C T G C G T A A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C T G 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)MF0003.1_REL_class/Jaspar(0.616)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C 1e-4-9.215e+0011.11%0.00%0.5bp (0.7bp)PB0157.1_Rara_2/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T C G T A C G T A A G T C 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)PB0081.1_Tcf1_1/Jaspar(0.757)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C T G C G T A A C G T C G T A C G T A 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)HLF/MA0043.3/Jaspar(0.625)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C G T C G T A 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)FOXB1/MA0845.1/Jaspar(0.704)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)HIF1A/MA1106.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C G T A C T G A C G T A C T G A C G T A C G T C G T A A C G T A G T C C G T A A C G T A C G T 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)PB0122.1_Foxk1_2/Jaspar(0.702)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.600)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.558)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C T G C G T A C G T A A C G T C G T A A G T C C G T A A C G T A C G T C G T A A C T G 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)DUXA/MA0884.1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C T G C G T A A C T G A C G T A G T C A G T C A C G T A C T G C G T A A G T C A G T C 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)RXRG(var.2)/MA1556.1/Jaspar(0.685)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A C G T C G T A A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)PH0107.1_Msx2/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C G T A C C G T A A C T G G T C A C G T A C T A G C G T A A T C G A G C T A T C G A G C T 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)ZNF317/MA1593.1/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T 1e-4-9.215e+0011.11%0.00%0.0bp (26.7bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C A C G T C G T A A C T G A G T C A C G T A C G T C G T A A C G T A G T C A G T C A G T C 1e-4-9.215e+0011.11%0.00%0.0bp (0.0bp)PH0139.1_Pitx3/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A G T C C G T A C G T A A G T C A G T C C G T A A G T C A C T G A C G T 1e-3-8.522e+0011.11%0.00%0.0bp (0.0bp)MAX::MYC/MA0059.1/Jaspar(0.723)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G T A A C T G A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C G T 1e-3-8.522e+0011.11%0.00%0.0bp (41.0bp)PB0145.1_Mafb_2/Jaspar(0.859)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G 1e-3-8.522e+0011.11%0.00%0.0bp (0.0bp)PB0080.1_Tbp_1/Jaspar(0.736)
More Information | Similar Motifs Found
motif file (matrix)
24 * C G T A A G T C A G T C A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T 1e-3-8.522e+0011.11%0.00%0.0bp (21.6bp)RUNX3/MA0684.2/Jaspar(0.654)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A G T C C G T A A C T G 1e-3-8.522e+0011.11%0.00%0.0bp (32.8bp)PB0121.1_Foxj3_2/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A G T C A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C 1e-3-8.522e+0011.11%0.00%0.0bp (0.0bp)PB0086.1_Tcfap2b_1/Jaspar(0.641)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C T G A C G T A C T G A C T G A C T G A C G T A C T G A C G T A C T G C G T A C G T A C G T A 1e-3-8.522e+0011.11%0.00%0.0bp (0.0bp)PB0013.1_Eomes_1/Jaspar(0.794)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A C G T A G T C A G T C A C G T C G T A A C T G A C T G A C G T A G T C 1e-3-8.117e+0011.11%0.00%0.0bp (8.9bp)PB0090.1_Zbtb12_1/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
29 * C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T A G T C A G T C 1e-3-7.269e+0011.11%0.01%0.0bp (51.9bp)ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer(0.752)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C G T A G T C 1e-3-7.269e+0011.11%0.01%0.0bp (49.0bp)PLAGL2/MA1548.1/Jaspar(0.760)
More Information | Similar Motifs Found
motif file (matrix)
31 * A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A G T C A G T C 1e-3-7.269e+0011.11%0.01%0.0bp (42.1bp)NKX2-8/MA0673.1/Jaspar(0.741)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T A C G T C G T A A C T G A C T G A C G T C G T A A C T G A C G T A G T C 1e-3-7.136e+0011.11%0.01%0.0bp (57.7bp)PB0154.1_Osr1_2/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C 1e-3-7.018e+0011.11%0.01%0.0bp (87.5bp)Arid5a/MA0602.1/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
34 * C G T A C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G 1e-3-6.913e+0011.11%0.01%0.0bp (91.2bp)HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C 1e-3-6.913e+0011.11%0.01%0.0bp (63.9bp)NFYB/MA0502.2/Jaspar(0.684)
More Information | Similar Motifs Found
motif file (matrix)
36 * C G T A C G T A A G T C A C G T A G T C A G T C A G T C A G T C C G T A A C G T 1e-3-6.913e+0011.11%0.01%0.0bp (62.1bp)MZF1/MA0056.2/Jaspar(0.746)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C T G A C T G A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C 1e-3-6.913e+0011.11%0.01%0.0bp (44.6bp)RHOXF1/MA0719.1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
38 * T G A C A G T C G T C A C T A G A C G T A T G C C G T A C G T A C G T A C T A G A G T C G T A C 1e-2-5.606e+0011.11%0.04%0.0bp (72.9bp)Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer(0.731)
More Information | Similar Motifs Found
motif file (matrix)