Information for 3-AAWCAGCWMRMS (Motif 3)

C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
Reverse Opposite:
A T C G A C G T A G C T A C T G C G T A A C T G A G T C A C G T A C T G C G A T A C G T A C G T
p-value:1e-6
log p-value:-1.495e+01
Information Content per bp:1.818
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif119.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets135.3 +/- 33.2bp
Average Position of motif in Background95.8 +/- 79.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AAWCAGCWMRMS
NAGAAACAGNN----
A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AAWCAGCWMRMS
TGTAAACAGGA----
A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAWCAGCWMRMS
GGGAACAGCCAC--
A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAWCAGCWMRMS
GTAAACAG------
A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AAWCAGCWMRMS
TGAGTCAGCA----
A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAWCAGCWMRMS
NAACAGCTGG--
C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAWCAGCWMRMS
NAHCAGCTGD--
C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAWCAGCWMRMS
-AACAGCTG---
C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAWCAGCWMRMS
---CAGCC----
C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

TFAP4/MA0691.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAWCAGCWMRMS
-AACAGCTGAT-
C G T A C G T A C G T A A G T C C G T A A C T G A G T C C G A T G T A C C T G A G T C A A T G C
A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T A C G T