| p-value: | 1e-6 |
| log p-value: | -1.448e+01 |
| Information Content per bp: | 1.756 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1066.3 |
| Percentage of Background Sequences with motif | 0.93% |
| Average Position of motif in Targets | 127.2 +/- 44.1bp |
| Average Position of motif in Background | 100.8 +/- 88.1bp |
| Strand Bias (log2 ratio + to - strand density) | 1.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAAGACCTDACA----- CAAATCCAGACATCACA |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 2 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GAAGACCTDACA --TGACCTYA-- |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | GAAGACCTDACA- -----CCAGACAG |
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|
|
SOX12/MA1561.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GAAGACCTDACA--- ----ACCGAACAATG |
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|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | GAAGACCTDACA--- -----CCAGACRSVB |
|
|
|
Smad4/MA1153.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GAAGACCTDACA ----TCTAGACA |
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|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GAAGACCTDACA --TGACCT---- |
|
|
|
Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GAAGACCTDACA-- --AGACCACCCASR |
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|
|
PB0121.1_Foxj3_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAAGACCTDACA----- AACACCAAAACAAAGGA |
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|
PH0140.1_Pknox1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAAGACCTDACA---- AAAGACCTGTCAATCC |
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