Information for 23-GAGTTACATT (Motif 33)

A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A C G T C G T A C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.234e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif103.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets167.0 +/- 0.0bp
Average Position of motif in Background111.2 +/- 159.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRTA2/MA1478.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GAGTTACATT
AATTGTTACATT
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTACATT---
TNGAATTTCATTNAN
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTACATT
NTTGATACATT
A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAGTTACATT--
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

ZNF652/MA1657.1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAGTTACATT
GAAAGAGTTAAA--
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGTTACATT
AATTGATACATT
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

PBX3/MA1114.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAGTTACATT---
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAGTTACATT---
---TTTCATTRCC
A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

TEAD2/MA1121.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAGTTACATT------
---TCACATTCCAGCC
A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTACATT
NTGATTGACAGN
A C G T A C G T A C T G C G T A A C T G A C G T A C G T C G T A A G T C C G T A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G