Information for 17-TCATCAATAA (Motif 32)

A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C T G C G T A
p-value:1e-3
log p-value:-7.380e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif89.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets145.0 +/- 0.0bp
Average Position of motif in Background124.3 +/- 132.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX2/MA0755.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TCATCAATAA
TAATCGATAA
A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TCATCAATAA
TAATCGATAA
A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TCATCAATAA--
GTCATCAATCATT
A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TCATCAATAA
TCATCAATCA
A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

PH0150.1_Pou4f3/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----TCATCAATAA--
GACNTCATTAATAANN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TCATCAATAA---
TCACCCATCAATAAACA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

ONECUT1/MA0679.2/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TCATCAATAA---
AAAAAATCAATAAATA
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TCATCAATAA
YCATCMATCA
A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TCATCAATAA--
CCATCAATCAAA
A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TCATCAATAA-
GYCATCMATCAT
A C G T A C G T A G T C C G T A A C G T A G T C C G T A C G T A A C G T C G T A C G T A A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T