Information for 8-AGCTACCTACTG (Motif 11)

C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A T A C G G A C T C T G A A C T G C T A G A C G T C T G A C T A G A T G C A C G T
p-value:1e-8
log p-value:-2.022e+01
Information Content per bp:1.773
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif53.9
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets111.6 +/- 48.5bp
Average Position of motif in Background87.7 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0155.1_Osr2_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGCTACCTACTG-
ACTTGCTACCTACACC
A C G T A C G T A C G T C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCTACCTACTG-
ACATGCTACCTAATAC
A C G T A C G T A C G T C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGCTACCTACTG-
---CACCTACTAT
C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T
A C G T A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PH0045.1_Hoxa1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCTACCTACTG-
CTGAGCTAATTACCGT
A C G T A C G T A C G T C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCTACCTACTG-----
--RGMCCTACTRTGTGC
C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCTACCTACTG--
---NNCCTGCTGNG
C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Zic2/MA1629.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGCTACCTACTG----
--CCCCCTGCTGTGNN
C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCTACCTACTG
NNACTTACCTN---
A C G T A C G T C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGCTACCTACTG--
--CCCCCTGCTGTG
C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G A C G T A C G T
A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCTACCTACTG
-GTTAACTAGN-
C G T A A T C G A G T C A G C T C G T A G A T C G T A C A G C T C G T A A G T C C G A T C T A G
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T