Information for 3-TTGAACTGCTAT (Motif 3)

A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T
Reverse Opposite:
C G T A C G A T C G T A A T C G A G T C C G T A A T C G A C G T C G A T A G T C C G T A G T C A
p-value:1e-4
log p-value:-1.087e+01
Information Content per bp:1.778
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif194.9
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets25.3 +/- 6.9bp
Average Position of motif in Background90.3 +/- 70.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0116.1_Nkx2-9/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGAACTGCTAT---
NATTTAAGTACTTNAAA
A C G T A C G T A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTGAACTGCTAT-
AATTTCAAGTGGCTTN
A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

MYF6/MA0667.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTGAACTGCTAT-
---AACAGCTGTT
A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGAACTGCTAT---
NATTTAAGTACTTANNA
A C G T A C G T A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

GRHL2/MA1105.2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGAACTGCTAT-
-AAAACAGGTTTT
A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T A C G T
A C G T T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

MSC/MA0665.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTGAACTGCTAT-
---AACAGCTGTT
A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGAACTGCTAT
NTCAAGTGG---
A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TTGAACTGCTAT-
-NAAACCGGTTTT
A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T A C G T
A C G T G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTGAACTGCTAT
NTCAAGTGGN--
A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAACTGCTAT
NNNTATTGAATTGNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A C G T A A T G C C G A T C T A G A T G C A C G T C G T A A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T