Information for 17-AAATTGAAATGC (Motif 24)

C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.769e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets162.0 +/- 0.0bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAATTGAAATGC
-NATTCAAAT--
C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAATTGAAATGC
GAAAGTGAAAGT-
A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAATTGAAATGC
GAAACTGAAACT-
A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAATTGAAATGC
GAAAAAATTGCAAGG-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAATTGAAATGC--
NNNTATTGAATTGNNN
A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAATTGAAATGC
GAAAMTGAAACT-
A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAATTGAAATGC
GAAASYGAAASY-
A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAATTGAAATGC
AGAAACAGAAACT-
A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAATTGAAATGC
BAGTCATANTGAAAG--
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAATTGAAATGC
GRAASTGAAAST-
A C G T C G T A C G T A C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C T G A G T C
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T