| p-value: | 1e-13 |
| log p-value: | -3.159e+01 |
| Information Content per bp: | 1.891 |
| Number of Target Sequences with motif | 21.0 |
| Percentage of Target Sequences with motif | 2.46% |
| Number of Background Sequences with motif | 121.6 |
| Percentage of Background Sequences with motif | 0.25% |
| Average Position of motif in Targets | 102.0 +/- 51.9bp |
| Average Position of motif in Background | 99.1 +/- 58.8bp |
| Strand Bias (log2 ratio + to - strand density) | -3.3 |
| Multiplicity (# of sites on avg that occur together) | 1.52 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATCCATCACT YCATCMATCA-- |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATCCATCACT GYCATCMATCAT- |
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PB0144.1_Lef1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATCCATCACT-- GAAGATCAATCACTTA |
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PB0188.1_Tcf7l2_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATCCATCACT-- GAAGATCAATCACTAA |
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PH0134.1_Pbx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCCATCACT----- TCACCCATCAATAAACA |
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|
PBX1/MA0070.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCCATCACT CCATCAATCAAA |
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MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATCCATCACT GTCATCAATCATT |
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|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATCCATCACT TCATCAATCA-- |
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|
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATCCATCACT RGCCATYAATCA-- |
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ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATCCATCACT GGCTCYAKCAYC |
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