| p-value: | 1e-5 |
| log p-value: | -1.162e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 25.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 191.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTCCATCTTAGG TNCCATATATGG |
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YY1/MA0095.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTCCATCTTAGG GCNGCCATCTTG-- |
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PB0078.1_Srf_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCCATCTTAGG-- TTCCATATATGGAA |
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MF0008.1_MADS_class/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GTCCATCTTAGG --CCATATATGG |
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|
|
SRF/MA0083.3/Jaspar
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GTCCATCTTAGG--- TGACCATATATGGTCA |
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|
|
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
| Match Rank: | 6 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCCATCTTAGG--- GGTCANYTGAGGWCA |
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|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 7 |
| Score: | 0.54 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCCATCTTAGG GYCATCMATCAT--- |
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|
|
NEUROG2(var.2)/MA1642.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.53 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTCCATCTTAGG- NNCCATCTGTNNN |
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|
|
THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer
| Match Rank: | 9 |
| Score: | 0.53 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCCATCTTAGG--- GGTCACCTGAGGTCA |
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|
YY1(Zf)/Promoter/Homer
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTCCATCTTAGG GCCGCCATCTTG-- |
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