Information for 12-WTCACAACARTG (Motif 17)

C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A T C G A G C T A C G T A T C G A C G T C A T G C T G A G C T A
p-value:1e-7
log p-value:-1.807e+01
Information Content per bp:1.801
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets94.4 +/- 55.0bp
Average Position of motif in Background77.3 +/- 47.2bp
Strand Bias (log2 ratio + to - strand density)3.1
Multiplicity (# of sites on avg that occur together)2.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--WTCACAACARTG-
ATGTCACAACAACAC
A C G T A C G T C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---WTCACAACARTG--
AACACCAAAACAAAGGA
A C G T A C G T A C G T C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-WTCACAACARTG-
NTTNAGAACAATTA
A C G T C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-WTCACAACARTG---
NNTNANAACAATTNNA
A C G T C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---WTCACAACARTG
CAAACAACAACACCT
A C G T A C G T A C G T C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

SOX8/MA0868.2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:WTCACAACARTG-
---AGAACAATGG
C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T
A C G T A C G T A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:WTCACAACARTG-----
ATAAGAACAAAGGACTA
C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:WTCACAACARTG
VSCACATCAAAG
C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:WTCACAACARTG-
---VRAACAATGG
C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T
A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:WTCACAACARTG-
---AAAACAATGG
C G A T A G C T G T A C C G T A A T G C C G T A C T G A A T G C G T C A C T A G C G A T A C T G A C G T
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G