Information for 5-AAGKTCCCTGGC (Motif 5)

G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C T G T C A G A T C G G T C A G T C A A G T C A G C T A C G T
p-value:1e-6
log p-value:-1.470e+01
Information Content per bp:1.661
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif35.00%
Number of Background Sequences with motif1210.4
Percentage of Background Sequences with motif2.56%
Average Position of motif in Targets82.0 +/- 54.1bp
Average Position of motif in Background101.0 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGKTCCCTGGC---
AAGGTCACTGACCTT
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C A C G T A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C C T G A A T G C A G C T T C A G T G C A G T A C G T A C A G C T G A C T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGKTCCCTGGC---
AAGGTCATTGACCTT
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C A C G T A C G T A C G T
C T G A C T G A A C T G C T A G A C G T A G T C T C G A A C G T A G C T T C A G G T C A A G T C T G A C G A C T G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGKTCCCTGGC--
NAGGTCANTGACCT
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGKTCCCTGGC
--ATTTCCTGTN
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGKTCCCTGGC
--ATTTCCTGTN
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGKTCCCTGGC---
NAGGTCAATGACCTC
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C A C G T A C G T A C G T
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGKTCCCTGGC
-RYHYACCTGB-
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGKTCCCTGGC-
-VCCTCTCTGDDY
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C A C G T
A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AAGKTCCCTGGC-
---TTGCGTGCVA
G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGKTCCCTGGC
GTCACGCTCNCTGA-
A C G T A C G T A C G T G T C A C T G A T C A G A C G T A C G T A T G C A G T C G T A C A C G T A C T G T A C G G T A C
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T