Information for 11-GTGGGTATAAAA (Motif 24)

A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C A G T C A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.714e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBP/MA0108.2/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GTGGGTATAAAA-------
----GTATAAAAGGCGGGG
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:forward strand
Alignment:GTGGGTATAAAA-------
----GTATAAAAGGCGGGG
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

CDX4/MA1473.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTGGGTATAAAA-
--GGCAATAAAAC
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTGGGTATAAAA
--KGCCATAAAA
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A
A C G T A C G T C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

TATA-Box(TBP)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTGGGTATAAAA--
--GNCTATAAAAGG
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

CDX1/MA0878.2/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTGGGTATAAAA-
--GGCCATAAAAC
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTGGGTATAAAA---
AAAGGTAATAAAATTT
A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

HOXD9/MA0913.2/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GTGGGTATAAAA-
---GCAATAAAAC
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GTGGGTATAAAA-
---GTCATAAAAN
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGGGTATAAAA---
TAAGGTAATAAAATTA
A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A