Information for 6-GTCACACGGA (Motif 28)

A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G A C G T A C T G A C G T A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.628e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif34.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background95.4 +/- 248.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTCACACGGA
GTCACATGAY
A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTCACACGGA
-TCACACCT-
A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCACACGGA
GTCACGTGGM
A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTCACACGGA-
-TBGCACGCAA
A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTCACACGGA
-TCACACCT-
A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

TFE3/MA0831.2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCACACGGA
GTCACGTG--
A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T A C G T

USF2/MA0526.3/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCACACGGA--
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

USF1/MA0093.3/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCACACGGA--
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A A C G T A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

TBX3/MA1566.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTCACACGGA
NTCACACCTN
A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C

TFEC/MA0871.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCACACGGA
NGTCACGTGNN
A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C A C T G A C T G C G T A
A C T G T C A G A C G T A T G C C G T A A G T C C T A G G C A T A T C G A T C G C A T G