Information for 22-ATCTATGCATAC (Motif 22)

C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A C T G C G T A A C G T
p-value:1e-3
log p-value:-8.459e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets153.0 +/- 0.0bp
Average Position of motif in Background157.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATCTATGCATAC----
AAAATATGCATAATAAA
A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ATCTATGCATAC--
----ATGMATATDC
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATCTATGCATAC
-GATTTGCATA-
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C
A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATCTATGCATAC-
NNATTTGCATATN
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C G T
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCTATGCATAC
-NATTTGCATNN
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C
A C G T G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATCTATGCATAC--
----ATGAATATTC
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATCTATGCATAC-----
--ATTTGCATACAATGG
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCTATGCATAC
--ATTTGCATA-
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C
A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCTATGCATAC
--ATTTGCATA-
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C
A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATCTATGCATAC--
TNTAATTTGCATANNN
A C G T A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C T G A G T C C G T A A C G T C G T A A G T C A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A