Information for 14-CCGTGTATGT (Motif 25)

A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C G T C A A C G T C G T A G T A C C G T A A G T C A C T G A C T G
p-value:1e-5
log p-value:-1.310e+01
Information Content per bp:1.956
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.4 +/- 68.1bp
Average Position of motif in Background128.7 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGTATGT
ANCGTTTANN-
A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

SRF/MA0083.3/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCGTGTATGT---
TGNCCATATATGGTCA
A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGTATGT----
NNGCGTGTGTGCNGCN
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

BARHL1/MA0877.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCGTGTATGT
NCGTTTAN--
A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCGTGTATGT----
NTTNTATGAATGTGNNC
A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGTATGT
TNCCATATATGG
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCGTGTATGT
NNTNTCATGAATGT
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCGTGTATGT
CCTTTGAWGT
A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCGTGTATGT----
CCATTGTATGCAAAT
A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCGTGTATGT
ATGCCCGGGCATGT
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T