Information for 5-CAGATGCTAAAG (Motif 5)

A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.7 +/- 28.0bp
Average Position of motif in Background74.2 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGATGCTAAAG
ACCAGATGGC----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CAGATGCTAAAG
AAACAGATGTTTA--
A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGCTAAAG
TCCAGATGTT----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGCTAAAG
AACAGATGGT----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAGATGCTAAAG
GGAACAGATGGCA---
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAGATGCTAAAG
ATTCCAGATGTTT---
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAGATGCTAAAG
NNVVCAGCTGBN----
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGATGCTAAAG
MCAGCTGBYH---
A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGATGCTAAAG
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CAGATGCTAAAG
AAGGCCAGATGGTCCGG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T C G T A C G T A C G T A A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G