Information for 1-VAGGAAAGAACG (Motif 1)

T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
Reverse Opposite:
T A G C A T C G C G A T A G C T G T A C C G A T A G C T A C G T G T A C A G T C A C G T A C G T
p-value:1e-8
log p-value:-1.869e+01
Information Content per bp:1.729
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1651.8
Percentage of Background Sequences with motif2.21%
Average Position of motif in Targets123.1 +/- 63.2bp
Average Position of motif in Background99.1 +/- 74.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--VAGGAAAGAACG
NACAGGAAAT----
A C G T A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---VAGGAAAGAACG
AACAAGGAAGTAA--
A C G T A C G T A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:VAGGAAAGAACG
AAGGCAAGTGT-
T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--VAGGAAAGAACG-
ARGAGGMCAAAATGW
A C G T A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--VAGGAAAGAACG----
GGAAGGAAGGAAGGAAGG
A C G T A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--VAGGAAAGAACG
NDCAGGAARTNN--
A C G T A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--VAGGAAAGAACG
NACAGGAAAT----
A C G T A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-VAGGAAAGAACG
ACAGGAAGTG---
A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----VAGGAAAGAACG
GAAACAGGAAGT----
A C G T A C G T A C G T A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T A C G T A C G T A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-VAGGAAAGAACG
ACAGGAAGTG---
A C G T T C G A C G T A A C T G A C T G G T C A C T G A C G T A A C T G C T G A C G T A A T G C A T C G
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T A C G T