Information for 20-GGTTGAGTGC (Motif 36)

A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A G T C C G T A C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.127e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.5 +/- 55.4bp
Average Position of motif in Background141.6 +/- 42.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGTTGAGTGC-
NNTTGAGTGNN
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GGTTGAGTGC--
-CTTGAGTGGCT
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GGTTGAGTGC-
-BTBRAGTGSN
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGTTGAGTGC---
NNNTTGAGTGGNNN
A C G T A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GGTTGAGTGC--
--TTGAGTGSTT
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGTTGAGTGC-
-CTYRAGTGSY
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

MSANTD3/MA1523.1/Jaspar

Match Rank:7
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GGTTGAGTGC--
--GTGAGTGNAC
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGTTGAGTGC--
--TTAAGTGCTT
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGTTGAGTGC--
--TTRAGTGSYK
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTTGAGTGC
--TTAAGTGC
A C T G A C T G A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C