Information for 19-AGCCAGGCTGAT (Motif 22)

C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T
p-value:1e-3
log p-value:-8.962e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background98.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGCCAGGCTGAT-
---CCTGCTGAGH
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF341/MA1655.1/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGCCAGGCTGAT---
---NNGGCTGTTCCN
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGCCAGGCTGAT
-----NGCTN--
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGCCAGGCTGAT
---TWGTCTGV-
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGGCTGAT
ATGCCAGACN---
A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGGCTGAT
CGTGCCAAG-----
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCCAGGCTGAT
--CCAGACAG--
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGCCAGGCTGAT--
----CGGCTGTTCC
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C

POL002.1_INR/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AGCCAGGCTGAT
---NNNANTGA-
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGCCAGGCTGAT---
GGNGCGNCTGTTNNN
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T