Information for 20-GTCTTTAGAAGA (Motif 27)

A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.385e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.0 +/- 0.0bp
Average Position of motif in Background98.9 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCTTTAGAAGA
GNCTATAAAAGG
A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCTTTAGAAGA--
TATCATTAGAACGCT
A C G T A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCTTTAGAAGA
ANTTCTNNAGAA--
A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCTTTAGAAGA
TTCCKNAGAA--
A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCTTTAGAAGA-----
-TCTTTCGAGGAATTTG
A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

Stat6/MA0520.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTCTTTAGAAGA-
ANTTCTCAGGAANNN
A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

HOXA4/MA1496.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCTTTAGAAGA
GTCATTAG----
A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTCTTTAGAAGA
------NGAAGC
A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

HOXD3/MA0912.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTCTTTAGAAGA
GTAATTAG----
A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G A C G T A C G T A C G T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCTTTAGAAGA
ATCATTAG----
A C T G A C G T A G T C A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G C G T A
T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T A C G T A C G T