Information for 8-AAGCAACTCT (Motif 29)

C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C G T A C G T A C T G A G T C A C G T A C G T
p-value:1e-4
log p-value:-9.387e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3659.6
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets132.0 +/- 66.2bp
Average Position of motif in Background98.2 +/- 120.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGCAACTCT-
-ACCAACTGTC
C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T
A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAACTCT
NTAGCAACG--
A C G T C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAGCAACTCT
TATGCAAATC-
A C G T C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AAGCAACTCT
SCCTAGCAACAG-
A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

MYF6/MA0667.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGCAACTCT-
-AACAGCTGTT
C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T
A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAGCAACTCT
TACCATAGCAACGGT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

MYOD1/MA0499.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGCAACTCT---
CAGCACCTGTCCC
C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A T G C C G T A T A C G T A G C C T G A A T G C T A G C A G C T A T C G A G C T A G T C G T A C A G T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAGCAACTCT
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAGCAACTCT
ATATGCAAAT--
A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AAGCAACTCT
TNCCATAGCAACNN-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C G T A G T C A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G A C G T