Information for 21-CCAACAAAGACT (Motif 27)

A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.729e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background115.2 +/- 35.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCAACAAAGACT
AAAACAAAGAA-
A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

SOX4/MA0867.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCAACAAAGACT
-GAACAAAGGG-
A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T
A C G T C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCAACAAAGACT
VRRACAAWGG--
A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCAACAAAGACT
GGAACAAAGR--
A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCAACAAAGACT--
GTCAACCAAGAATTC
A C G T A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCAACAAAGACT--
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCAACAAAGACT--
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAACAAAGACT
BMRVACAAWGGV-
A C G T A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCAACAAAGACT
--RACAAWGG--
A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CCAACAAAGACT---
---ACAAAGGNBCCT
A G T C A G T C C G T A C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T