Information for 7-CTTRATTTGTTT (Motif 8)

A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T
Reverse Opposite:
C G T A C G T A C G T A G A T C G T C A C G T A G T C A C G A T A G C T T C G A C G T A A T C G
p-value:1e-4
log p-value:-1.103e+01
Information Content per bp:1.648
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif62.50%
Number of Background Sequences with motif7671.1
Percentage of Background Sequences with motif14.72%
Average Position of motif in Targets119.5 +/- 64.4bp
Average Position of motif in Background99.6 +/- 73.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTTRATTTGTTT--
NNNTTAATTGGTTTTT
A C G T A C G T A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTTRATTTGTTT------
--NNTTTTGTTTTGATNT
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTTRATTTGTTT--
NNNTTAATTGGTTTTN
A C G T A C G T A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CTTRATTTGTTT--
-----ATTGTTTAN
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

ZNF384/MA1125.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTTRATTTGTTT----
----TTTTTTTTTANN
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTTRATTTGTTT-----
-NNNNTTTGTTTACNNT
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTRATTTGTTT-
---CCATTGTTNY
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CTTRATTTGTTT
-----ATTGTT-
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTRATTTGTTT-------
--NNNTTTGTTTACNTTNN
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTRATTTGTTT-------
--NNNTTTGTTTACNTTNN
A T G C C G A T A C G T T C G A C G T A A C G T C G A T A C G T C A T G A C G T G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T