Information for 4-AAACAAATACAG (Motif 5)

C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
Reverse Opposite:
T G A C C G A T A C T G A G C T C G T A A C G T A C G T A C G T A T C G A G C T A C G T C G A T
p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.764
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif234.6
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets96.7 +/- 46.0bp
Average Position of motif in Background93.0 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj3/MA0851.1/Jaspar

Match Rank:1
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------AAACAAATACAG
AAAAAGTAAACAAACAC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------AAACAAATACAG
AAAAAGTAAACAAACAC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAACAAATACAG
AAAGTAAACAAAAATT-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAACAAATACAG----
-AACAATTTCAGTGTT
C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAACAAATACAG
GTAAACAA------
A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXP2/MA0593.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AAACAAATACAG
AAGTAAACAAA-----
A C G T A C G T A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACAAATACAG
GTAAACAA------
A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AAACAAATACAG
ATATCAAAACAAAACA--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACAAATACAG
GTAAACAA------
A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Foxf1/MA1606.1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAACAAATACAG
ATGTAAACAAA-----
A C G T A C G T A C G T A C G T C G T A C G T A C T G A T A G C G T C A T G C A G T C A C G A T T C G A A G T C G C T A A C T G
C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T