Information for 4-TGCAGTGG (Motif 39)

C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G
Reverse Opposite:
A G T C A G T C C T G A A G T C A C G T C T A G T A G C C G T A
p-value:1e-2
log p-value:-4.972e+00
Information Content per bp:1.865
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif3125.0
Percentage of Background Sequences with motif3.75%
Average Position of motif in Targets127.1 +/- 63.2bp
Average Position of motif in Background102.1 +/- 80.2bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.88
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGTGG----
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCAGTGG-
BTBRAGTGSN
A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGTGG---
NNNTTGAGTGGNNN
A C G T A C G T A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTGG
NTCAAGTGG
A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTGG-
NTCAAGTGGN
A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGCAGTGG--
TTGAGTGSTT
C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGTGG-
CTYRAGTGSY
A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGTGG----
AATTTCAAGTGGCTTN
A C G T A C G T A C G T A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TGCAGTGG--
----GTGGAT
C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGCAGTGG----
AAATTCAAGTGGNTTN
A C G T A C G T A C G T A C G T C G A T A T C G A G T C C G T A A C T G A G C T A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A