Information for 3-TGATGGGCCC (Motif 9)

A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G T A C A G T C G T A C C G T A C G A T T G A C C G T A
p-value:1e-10
log p-value:-2.421e+01
Information Content per bp:1.845
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif75.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets110.2 +/- 51.6bp
Average Position of motif in Background96.0 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAGL2/MA1548.1/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:TGATGGGCCC---
---TGGGCCCCCT
A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGATGGGCCC--
--GTGGGCCCCA
A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

Plagl1/MA1615.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGATGGGCCC----
-NNTGGCCCCAGNN
A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGATGGGCCC
NCTGATTGGNN-
A C G T A C G T A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGATGGGCCC
NCTGATTGGNN-
A C G T A C G T A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGATGGGCCC-
CTCATTGGCCAG
A C G T A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C A C G T
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGATGGGCCC----
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGATGGGCCC----
----KGGCCYCWTD
A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGATGGGCCC
CCGATTGGCT-
A C G T A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGATGGGCCC
GTTAATGGCC--
A C G T A C G T A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T