| p-value: | 1e-4 |
| log p-value: | -9.599e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 171.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CDX2/MA0465.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTTTACTGCAT NTTTTATTGCNN |
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|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTTTACTGCAT NTTTCATTRCHD |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CTTTTACTGCAT -TTTTATGGCM- |
|
|
|
HOXD9/MA0913.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTTTACTGCAT NTTTTATTGC-- |
|
|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTTTTACTGCAT -TTTTATGGCB- |
|
|
|
HOXB13/MA0901.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTTTTACTGCAT NNATTTTATTGGNN |
|
|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CTTTTACTGCAT- NTNAATTTTATTGNATT |
|
|
|
CDX4/MA1473.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTTTACTGCAT GTTTTATTGCC- |
|
|
|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTTTTACTGCAT -TTTAATTGCN- |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTTTACTGCAT GTTTTATGGCC- |
|
|
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