Information for 25-GCTTGAAAGT (Motif 35)

A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C
p-value:1e-2
log p-value:-6.287e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif74.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background115.4 +/- 128.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCTTGAAAGT
CGGTTTCAAA--
A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGAAAGT--
NNCTGGAATGTNN
A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCTTGAAAGT-
ATAACCACTTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCTTGAAAGT
--TTGACAGC
A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTGAAAGT-
ANATCAAAGNN
A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTGAAAGT
ASATCAAAGG
A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTTGAAAGT-
-ACTGAAACCA
A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

TEAD4/MA0809.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTGAAAGT--
NCTGGAATGTNN
A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTTGAAAGT----
NTTNTATGAATGTGNNC
A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGAAAGT
GAAAGTGAAAGT
A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T