Information for 3-AATTCATGGGAA (Motif 3)

G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T A G T C A T G C A T G C C T G A A C G T A T C G C T G A C T G A C G A T A C G T
p-value:1e-6
log p-value:-1.585e+01
Information Content per bp:1.728
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif404.4
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets84.2 +/- 67.3bp
Average Position of motif in Background97.0 +/- 73.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:AATTCATGGGAA--
----CCTGGGAAAG
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AATTCATGGGAA
ANTTCTNNAGAA
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AATTCATGGGAA--
----CSTGGGAAAD
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AATTCATGGGAA--
CATTTCCTGAGAAAT
A C G T G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATTCATGGGAA
--TTCTNMGGAA
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AATTCATGGGAA-
--CTTCTGGGAAA
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

PB0115.1_Ehf_2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AATTCATGGGAA------
--AAGATCGGAANTNNNA
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AATTCATGGGAA----
--TTTCCAGGAAATGG
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Stat5b/MA1625.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATTCATGGGAA---
NNNTTCTGGGAANNN
G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T A C G T A C G T
A T C G C G T A A G C T A G C T G A C T T G A C G A C T C A T G C T A G C T A G C G T A C T G A C G T A G A C T T C A G

EBF1/MA0154.4/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATTCATGGGAA--
NNTCCCCTGGGGANN
A C G T G T C A C G T A A G C T A G C T A T G C G T C A A G C T A T C G A T C G A C T G C T G A C G T A A C G T A C G T
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T