Information for 3-CTGRGTATAW (Motif 8)

A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A A C G T C G T A A G T C A G C T A G T C C G T A A C T G
p-value:1e-4
log p-value:-9.958e+00
Information Content per bp:1.920
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif48.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets114.0 +/- 25.0bp
Average Position of motif in Background118.7 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTGRGTATAW
WDNCTGGGCA---
A C G T A C G T A C G T A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGRGTATAW-----
ANNNGGATATATCCNNN
A C G T A C G T A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTGRGTATAW---------
----GTATAAAAGGCGGGG
A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTGRGTATAW---------
----GTATAAAAGGCGGGG
A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTGRGTATAW
GCTGTG-----
A C G T A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGRGTATAW
CSTGGGAAAD-
A C G T A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGRGTATAW-
NCNGTGTAGACG
A C G T A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

MSANTD3/MA1523.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTGRGTATAW
GTGAGTGNAC
A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGRGTATAW
CCTGGGAAAG-
A C G T A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T

VDR/MA0693.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGRGTATAW
-TGAGTTCA-
A G T C A C G T A C T G C T G A A C T G A C G T C G T A A C G T C G T A C G T A
A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T