Information for 18-GAGCTTGCCT (Motif 30)

A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C
p-value:1e-2
log p-value:-6.784e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif37.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.0 +/- 0.0bp
Average Position of motif in Background91.6 +/- 90.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GAGCTTGCCT-
NNACTTGCCTT
A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAGCTTGCCT
AAGCTTG---
A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GAGCTTGCCT-
NNNNATGACCTTGANTN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NR5A1/MA1540.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTTGCCT
NTGACCTTGAN-
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T

ZNF682/MA1599.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAGCTTGCCT--
NNAGGGGCTTGGCCNN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTTGCCT
TGACCTTGAV-
A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGCTTGCCT
NATGACCTTGA--
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

ESRRA/MA0592.3/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAGCTTGCCT
NNTGACCTTGANN
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTTGCCT
ATGACCTTGA--
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGCTTGCCT
NTGACCTTGA--
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T