Information for 21-TACTTGGCTGCG (Motif 23)

A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C T G A C G T C G T A
p-value:1e-3
log p-value:-9.177e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TACTTGGCTGCG
NNACTTGCCTT--
A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TACTTGGCTGCG
TACTTGGCAGA-
A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TACTTGGCTGCG
---TWGTCTGV-
A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TACTTGGCTGCG
GTCATGCHTGRCTGS-
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TACTTGGCTGCG
--NTTGGCANN-
A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

LHX2/MA0700.2/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TACTTGGCTGCG
NNTAATTGGNN---
A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TACTTGGCTGCG-
GGGGCTYGKCTGGGA
A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TACTTGGCTGCG
TGATTGGCTANN
A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TACTTGGCTGCG
NGTCACGCTTGGCTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TACTTGGCTGCG
GNNTTAATTGGTTGTT
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C T G A G T C A C T G
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T