Information for 12-TGAAAACGGA (Motif 31)

A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-8.002e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background158.6 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX2/MA1119.1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGAAAACGGA---
AACTGAAACCTGATAC
A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAAAACGGA
ACTGAAACCA--
A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAAAACGGA-----
TGWAAYCTGABACCB
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGAAAACGGA---
-GWAAYHTGAKMC
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAAAACGGA--
--NHAACBGYYV
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

IRF7/MA0772.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGAAAACGGA---
ACGAAAGCGAAAGT
A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

SIX1/MA1118.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAAAACGGA--
-GTAACCTGATA
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T
A C G T C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAAAACGGA---
-GAAASYGAAASY
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

Stat2/MA1623.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAAAACGGA----
-AGAAACAGAAACT
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAAAACGGA
TTTGAAACCG--
A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C T G A C T G C G T A
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T