Information for 11-GGCCACGCAG (Motif 24)

A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C T G A C G T A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-8.239e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets162.0 +/- 0.0bp
Average Position of motif in Background30.4 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:GGCCACGCAG
---CACGCA-
A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGCCACGCAG
ACGCCCACGCA-
A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACGCAG-
AGACCACCCASR
A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C G T
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

PAX5/MA0014.3/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGCCACGCAG
NNGGTCACGCTC
A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGCCACGCAG-
CTACGCCCACGCACT
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

EGR4/MA0733.1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGCCACGCAG--
TTACGCCCACGCATTT
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACGCAG-
GGACCACCCACG
A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGCCACGCAG-----
-GCCGCGCAGTGCGT
A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Klf12/MA0742.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCCACGCAG-----
GACCACGCCCTTATT
A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCCACGCAG
TBGCACGCAA
A C T G A C T G A G T C A G T C C G T A A G T C A C T G A G T C C G T A A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A