Information for 2-ATTTGCCAAA (Motif 4)

C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
Reverse Opposite:
A C G T A C G T C G A T A C T G A T C G A G T C C T G A C G T A C G T A A G C T
p-value:1e-13
log p-value:-3.143e+01
Information Content per bp:1.854
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.23%
Number of Background Sequences with motif133.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets93.7 +/- 61.1bp
Average Position of motif in Background98.1 +/- 51.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ATTTGCCAAA-
-GGTGCCAAGT
C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATTTGCCAAA
-CGTGCCAAG
C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ATTTGCCAAA
--TTGCCAAG
C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

NFYB/MA0502.2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATTTGCCAAA
CTCATTGGCCAG-
A C G T A C G T A C G T C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTTGCCAAA--
-NNTGCCAAGNN
C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A A C G T A C G T
A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTTGCCAAA
ATTGCGCAAC
C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATTTGCCAAA----
CAATTGCAAAAATAT
A C G T C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTTGCCAAA
ATTTTCCATT
C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATTTGCCAAA
-TTTTCCA--
C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATTTGCCAAA
GATTTGCATA-
A C G T C T G A A C G T C G A T G A C T C T A G A T G C A G T C C G T A G T C A G T C A
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T