Information for 18-ATCCCTGACC (Motif 30)

C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C T G A C T G A T C G C G T A A C G T
p-value:1e-3
log p-value:-8.831e+00
Information Content per bp:1.951
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif72.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets105.9 +/- 39.0bp
Average Position of motif in Background108.3 +/- 52.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)2.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:ATCCCTGACC-
-----TGACCT
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR2C1/MA1535.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:ATCCCTGACC---
----NTGACCTCN
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ATCCCTGACC-
TGACCTTGACCT
A C G T C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ATCCCTGACC-------
-----TGACCYYTGVYN
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:ATCCCTGACC---
-----TGACCYCT
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATCCCTGACC-------
-NNNNTGACCCGGCGCG
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ATCCCTGACC---
-----TGACCTYA
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:ATCCCTGACC--
----NTGACCTN
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:ATCCCTGACC-------
-----TGACCTYTGVMC
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

PAX5/MA0014.3/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCCCTGACC--
GAGCGTGACCCC
C G T A A C G T A T G C A G T C A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C