| p-value: | 1e-4 |
| log p-value: | -9.735e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 98.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAAGACTAATTT- ACCGTGACTAATTNN |
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PH0107.1_Msx2/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TAAGACTAATTT----- GAAGACCAATTAGCGCT |
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|
TLX2/MA1577.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | TAAGACTAATTT- -----CTAATTAN |
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|
PH0092.1_Lhx2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAAGACTAATTT------ -TAAACTAATTAGTGAAC |
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|
MF0010.1_Homeobox_class/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TAAGACTAATTT ----AATAATT- |
|
|
|
PH0033.1_Gbx1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TAAGACTAATTT------ -TNCACTAATTAGTNNNN |
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|
|
PAX4/MA0068.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | TAAGACTAATTT- -----CTAATTAG |
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|
|
PH0175.1_Vax2/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TAAGACTAATTT---- GTGCACTAATTAAGAC |
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|
|
VSX2/MA0726.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | TAAGACTAATTT- -----CTAATTAG |
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|
VSX1/MA0725.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | TAAGACTAATTT- -----CTAATTAT |
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