Information for 21-CACCTACCTA (Motif 34)

A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T C G T A A C T G A C T G A C G T A T C G
p-value:1e-4
log p-value:-9.783e+00
Information Content per bp:1.979
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets102.4 +/- 54.9bp
Average Position of motif in Background113.4 +/- 50.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CACCTACCTA
NNACTTACCTN
A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACCTACCTA
CAGCACCTGCCCC
A C G T A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF3/MA0522.3/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACCTACCTA
CGCACCTGCCC-
A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACCTACCTA
CGCACCTGCCG-
A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACCTACCTA
TRCACCTGCY--
A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACCTACCTA
NGCACCTGCN--
A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C A C G T A C G T

TCF4/MA0830.2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACCTACCTA
CGGCACCTGCCCC
A C G T A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACCTACCTA
SNGCACCTGCHS-
A C G T A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCTACCTA
CCCACCTGCGC-
A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACCTACCTA
TGACACCT-----
A C G T A C G T A C G T A T G C C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C G T C G T A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T