Information for 6-CTGTCGTTTC (Motif 8)

A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A C T G
p-value:1e-3
log p-value:-9.082e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTGTCGTTTC-
ACTTTCGTTTCT
A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTGTCGTTTC
CTGTGGTTTN
A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTGTCGTTTC
GCTGTGGTTT-
A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCGTTTC
NNTGTGGTTT-
A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGTCGTTTC
GTCTGTGGTTT-
A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTGTCGTTTC
NNHTGTGGTTWN
A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGTCGTTTC------
-TNTGGTTTCGATACN
A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCGTTTC-
ASTTTCASTTYC
A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGTCGTTTC---
---TGGTTTCAGT
A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCGTTTC-
NNTGACCTTTNN
A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A G T C A C G T
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A