Information for 23-CAGTGTCATTAC (Motif 24)

A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.103e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA4/MA1496.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----GTCATTAG
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G

HOXA5/MA0158.2/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----GTAATTAC
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A T C G A G C T T G C A C G T A A C G T A C G T C G T A T A G C

HOXD8/MA0910.2/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----GCAATTAC
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

HOXC4/MA1504.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----GTCATTAA
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A

HOXA7/MA1498.1/Jaspar

Match Rank:5
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----GCAATTAC
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C

HOXB8/MA1502.1/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----GCAATTAC
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

HOXB4/MA1499.1/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----ATCATTAG
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G

HOXD4/MA1507.1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----ATCATTAG
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGTGTCATTAC-
---TTTCATTRCC
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

HOXA2/MA0900.2/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CAGTGTCATTAC
----GTAATTAG
A G T C C G T A A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T A C G A G C T T G C A C G T A A C G T A C G T C T G A T A C G