Information for 25-CAGGCACACATG (Motif 37)

A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C T G
p-value:1e-2
log p-value:-5.465e+00
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets102.8 +/- 55.4bp
Average Position of motif in Background101.3 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAGGCACACATG---
CGAAGCACACAAAATA
A C G T A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAGGCACACATG---
AGCGGCACACACGCAA
A C G T A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

MXI1/MA1108.2/Jaspar

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:CAGGCACACATG--
----GACACATGGC
A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGGCACACATG
CCAGGAACAG---
A C G T A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCACACATG--
SCAGYCADGCATGAC
A C G T A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CAGGCACACATG
--DGCACACGTG
A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G
A C G T A C G T C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G

Twist2/MA0633.1/Jaspar

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAGGCACACATG--
----NACATATGGN
A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CAGGCACACATG---
---GCACACCTGKNC
A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGGCACACATG-
-----ACATATGG
A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGCACACATG---
---ACACACCTGTGC
A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C T C G A T G A C C G T A A T G C T A G C A C G T A C T G A G C T A C T G G A T C