Information for 12-AGAAAAGGCC (Motif 24)

C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C
Reverse Opposite:
C T A G C T A G G T A C G A T C G A C T A C G T A G C T G C A T G T A C G C A T
p-value:1e-6
log p-value:-1.489e+01
Information Content per bp:1.823
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif505.9
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets120.4 +/- 44.4bp
Average Position of motif in Background97.9 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A1/MA1112.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGAAAAGGCC---
-TTAAAGGTCAAA
C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T A C G T A C G T
A C G T C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGAAAAGGCC-
ANGNAAAGGTCA
A C G T C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

GATA4/MA0482.2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGAAAAGGCC
NNAGATAAGGNN
A C G T A C G T C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C
C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGAAAAGGCC-
-GGAAANCCCC
C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGAAAAGGCC--
GGAGAAAGGTGCGA
A C G T A C G T C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:5
Orientation:forward strand
Alignment:AGAAAAGGCC---
-----AGGCCTNG
C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAAAAGGCC-----
TCTCAAAGGTCACGAG
A C G T C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGAAAAGGCC
CAGATAAGGN-
A C G T C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGAAAAGGCC---
---CAAGGHCANV
C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AGAAAAGGCC---
-----AGGCCTAG
C G T A A C T G C G T A C T G A C G T A C T G A C T A G C A T G G A T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G