Information for 2-GVTGCAGGGTGG (Motif 2)

A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C G T A C A G T C C G A T A T C G A G T C G T C A A C T G T A G C
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.789
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.08%
Number of Background Sequences with motif108.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets91.7 +/- 52.4bp
Average Position of motif in Background100.6 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GVTGCAGGGTGG---
CAATGCATTGTGGGTA
A C G T A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.66
Offset:8
Orientation:reverse strand
Alignment:GVTGCAGGGTGG--
--------GTGGAT
A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

KLF4/MA0039.4/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GVTGCAGGGTGG----
----NNGGGTGGGGNN
A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C A T G C T A G A T C G T A C G G A C T C A T G C A T G C T A G C T A G T A G C A T C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GVTGCAGGGTGG--
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GVTGCAGGGTGG---
---YSTGGGTGGTCT
A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GVTGCAGGGTGG------
--TGCGGAGTGGGACTGG
A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0167.1_Sox13_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GVTGCAGGGTGG------
-GTATTGGGTGGGTAATT
A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

KLF17/MA1514.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GVTGCAGGGTGG--
AAGGGGTGCGTGGTG
A C G T A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G

ZBTB7C/MA0695.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GVTGCAGGGTGG----
----NTCGGTGGTCGC
A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GVTGCAGGGTGG
TNTCCTGCTGTGNNG
A C G T A C G T A C G T A T C G T G A C A C G T A C T G A T G C C G T A T C A G C A T G A C T G A C G T A C T G A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G