Information for 16-GACCTATTAG (Motif 35)

A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T A G T C
p-value:1e-3
log p-value:-7.264e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets192.0 +/- 0.0bp
Average Position of motif in Background81.9 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GACCTATTAG
-ACCGATTAG
A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PH0107.1_Msx2/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GACCTATTAG----
GAAGACCAATTAGCGCT
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GACCTATTAG--
AAAAACCATTAAGG
A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GACCTATTAG--
-ATCCATTAGCA
A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G A C G T A C G T
A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTATTAG-
NNNNTGACCTTTNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

LHX2/MA0700.2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GACCTATTAG-
AACCAATTAAT
A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G A C G T
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTATTAG-
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GACCTATTAG
--CCAATTAA
A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G
A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GACCTATTAG
--GCAATTAG
A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G
A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

Nobox/MA0125.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GACCTATTAG
-ACCAATTA-
A C T G C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G
A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T