Information for 8-TCACCTACTTAC (Motif 9)

C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
Reverse Opposite:
A C T G C G A T C G T A C G T A C A T G A C G T C G T A A C T G C T A G A C G T C T A G C G T A
p-value:1e-10
log p-value:-2.313e+01
Information Content per bp:1.769
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif85.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets116.9 +/- 51.1bp
Average Position of motif in Background105.4 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCACCTACTTAC
NNCTCACCTCCTNN-
A C G T A C G T A C G T C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTACTTAC-
TTGACCTANTTATN
A C G T C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

NR1D2/MA1532.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTACTTAC--
NTGACCCACTAACCC
A C G T C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C A C G T A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTACTTAC
BTGACCTAVTTW-
A C G T C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T

RORC/MA1151.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACCTACTTAC
TGACCTANTTAN
C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

NR1D1/MA1531.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTACTTAC--
NTGACCTACTGACCC
A C G T C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCACCTACTTAC
--AGCTCATTAT
C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

HOXD3/MA0912.2/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCACCTACTTAC
----CTAATTAC
C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCACCTACTTAC
TGACACCT------
A C G T A C G T C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCACCTACTTAC
-CACCTACTAT-
C G A T A G T C C G T A A G T C G T A C C G A T T G C A G T A C G C A T C G A T C G T A A G T C
A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T