Information for 18-GTCATGCTTC (Motif 35)

A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A A G T C
p-value:1e-3
log p-value:-6.977e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif66.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background119.4 +/- 76.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTCATGCTTC
NNGGTCACGCTC-
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCATGCTTC-----
NGTCACGCTTGGCTGC
A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTCATGCTTC
AGTCACGC---
A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GTCATGCTTC-
-----GCTTCC
A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PAX1/MA0779.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCATGCTTC------
CGTCACGCATGACTGCA
A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTCATGCTTC
--CAAGCTT-
A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCATGCTTC----
GTCACGCTCNCTGA
A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCATGCTTC------
CGTCACGCATGACTGCA
A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCATGCTTC
GKVTCADRTTWC
A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCATGCTTC--
GTGCCACGCGACTG
A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G