| p-value: | 1e-4 |
| log p-value: | -1.151e+01 |
| Information Content per bp: | 1.885 |
| Number of Target Sequences with motif | 8.0 |
| Percentage of Target Sequences with motif | 1.05% |
| Number of Background Sequences with motif | 63.2 |
| Percentage of Background Sequences with motif | 0.13% |
| Average Position of motif in Targets | 93.5 +/- 51.7bp |
| Average Position of motif in Background | 96.2 +/- 42.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.6 |
| Multiplicity (# of sites on avg that occur together) | 2.88 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTTTAGGGTTTT NGANTTTTATGGCTCN |
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Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAGGGTTTT TTTTATGGCB-- |
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PH0047.1_Hoxa11/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTTAGGGTTTT- NNGTTTTACGACTTTA |
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|
PH0066.1_Hoxc11/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTTAGGGTTTT- NNNTTTTACGACNTTN |
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BARX2/MA1471.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TTTTAGGGTTTT- -NTAATGGTTTTN |
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|
|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTTAGGGTTTT DGWTTTATGRCN-- |
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|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTTTAGGGTTTT TTTTATGGCM-- |
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|
|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAGGGTTTT- NTTAAGTGGTTNN |
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|
HOXD12/MA0873.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTTAGGGTTTT NTTTTACGACT-- |
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PB0136.1_IRC900814_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAGGGTTTT---- TTTTACGACTTTCCAT |
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