Information for 5-GGTATAATCTCC (Motif 8)

A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.025e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGTATAATCTCC
---YTAATCCY-
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

DPRX/MA1480.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTATAATCTCC
NGGATTATCT--
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGTATAATCTCC----
AGGCTAATCCCCAANG
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGTATAATCTCC
--CCTAATCCGC
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GGTATAATCTCC-
NNNNNBAGATAWYATCTVHN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PITX2/MA1547.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTATAATCTCC
---ATAATCCC-
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A C G T A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T

GATA1/MA0035.4/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTATAATCTCC
-TTCTAATCTAT
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGTATAATCTCC--
---CTAATCCTCTT
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PB0125.1_Gata3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGTATAATCTCC----
NNNNNCGATANNATCTNNNNAN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGTATAATCTCC
--NYTAATCCYB
A C T G A C T G A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T