Information for 5-GGAGAGAGTATG (Motif 6)

A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T C G T A A G T C C G A T A G T C A C G T A G T C A C G T G T A C A G T C
p-value:1e-10
log p-value:-2.462e+01
Information Content per bp:1.884
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets101.1 +/- 58.5bp
Average Position of motif in Background102.6 +/- 78.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGAGTATG
NAGAGAAAGNA--
A C G T A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGAGAGAGTATG-----
-NNGCGTGTGTGCNGCN
A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

KLF9/MA1107.2/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGAGAGTATG----
NGNGTGGGTGTGGCNG
A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T A C G T A C G T A C G T
A C T G T C A G C A T G T C A G C A G T T C A G A C T G T A C G A G C T A T C G A C G T T C A G A C T G A T G C A G C T A C T G

MSANTD3/MA1523.1/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GGAGAGAGTATG-
---GTGAGTGNAC
A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T
A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGAGAGAGTATG--
----ATAGTAGGTG
A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGAGAGAGTATG
GAAAGTGAAAGT---
A C G T A C G T A C G T A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGAGAGAGTATG---
---NTGGGTGTGGCC
A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGAGAGAGTATG---
AGNACANNNTGTNCTN
A C G T A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GGAGAGAGTATG---
GRACAGWMTGTYCTB
A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGAGAGAGTATG---
---GGGGGTGTGTCC
A C T G A C T G C G T A T A C G C G T A A C T G C G T A A C T G A C G T C T G A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C