Information for 19-AAAAATTCATAC (Motif 27)

C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.363e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets159.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT3/MA0757.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAAATTCATAC-
AAAAAATCAATAAT
A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAAATTCATAC-
AAAAAATCGATAAT
A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AAAAATTCATAC
GAATATTCAT--
C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAAAATTCATAC----
--ACATTCATGACACG
C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAAATTCATAC
-AAAGTTCAT--
C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAATTCATAC
TNNAGAACAATANATNN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAAATTCATAC---
GACCACATTCATACAAT
A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0175.1_Sox4_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AAAAATTCATAC
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAAATTCATAC
ATAAACAATTAAACA
A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

ONECUT1/MA0679.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAAATTCATAC---
AAAAAATCAATAAATA
A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A