Information for 5-CGTGTCTATG (Motif 26)

A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C T G C G T A A G T C C G T A A G T C A C T G
p-value:1e-3
log p-value:-8.248e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif28.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets194.0 +/- 0.0bp
Average Position of motif in Background107.8 +/- 139.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGTGTCTATG---
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTCTATG---
NCCGTTGCTANGNGN
A C G T A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTCTATG---
NNNGTAACTANGNNA
A C G T A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTCTATG---
NNCGTTGCTATGGNN
A C G T A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGTGTCTATG
NHGTCGTGAYDN--
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTGTCTATG---
-NTGTTTAYATWW
A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTGTCTATG--
CBTGTTTAYAWW
A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTGTCTATG
--TGTTTAC-
A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G
A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CGTGTCTATG
GGCACGTGNC----
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T

RFX3/MA0798.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGTGTCTATG---
CGGTTGCTATGGCA
A C G T A G T C A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A