Information for 5-CTAGACCCAGTT (Motif 10)

A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background156.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTAGACCCAGTT
NGNTCTAGAACCNGV-
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTAGACCCAGTT-
-BTGACCTAVTTW
A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTAGACCCAGTT
--TGACCTARTT
A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTAGACCCAGTT
--TGACCTARTT
A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTAGACCCAGTT---
-TTGACCTANTTATN
A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTAGACCCAGTT
TCTAGACA-----
A C G T A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

RORC/MA1151.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTAGACCCAGTT--
--TGACCTANTTAN
A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTAGACCCAGTT-
NNHYTGACCTAGWTT
A C G T A C G T A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTAGACCCAGTT--
NNCNTGACCCCGCTCT
A C G T A C G T A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

RORB/MA1150.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTAGACCCAGTT
-NTGACCTAATT
A G T C A C G T C G T A A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
A C G T C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T