Information for 22-CTTGAACATTAT (Motif 24)

A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12/MA1649.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTTGAACATTAT
ATCTGGAACCC---
A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C A C G T A C G T A C G T

NR6A1/MA1541.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGAACATTAT
NTGACCTTGAACTTGAN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGAACATTAT
NNGATCTAGAACCTNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTGAACATTAT
GGTTAAACATTAA
A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTGAACATTAT-
TTCTAGAABNTTCTA
A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTTGAACATTAT
-TTGAMCTTTG-
A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTTGAACATTAT
-ATGAACTTT--
A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTTGAACATTAT
TTCTAGAACGTTC-
A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T

HSF1/MA0486.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTTGAACATTAT
TTCTAGAACGTTC-
A C G T A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTGAACATTAT---
TTAAGAACAATAAATT
A C G T A G T C A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T