Information for 15-CCTCATTGTTAC (Motif 20)

A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C T G C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.574e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CCTCATTGTTAC
----ATTGTTA-
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTCATTGTTAC--
CTATAATTGTTAGCG
A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCTCATTGTTAC
NNCCATTGTNN-
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CCTCATTGTTAC
----ATTGTT--
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCTCATTGTTAC
--CCWTTGTYYB
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTCATTGTTAC
NNCCATTGTNN-
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCTCATTGTTAC
-CTCATTGTC--
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCTCATTGTTAC
--CCATTGTTYB
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX8/MA0868.2/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCTCATTGTTAC
--CCATTGTTCT
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

SOX4/MA0867.2/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCTCATTGTTAC
-NCCTTTGTTC-
A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T C G T A A G T C
A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T