Information for 6-CCTCATAGCCCT (Motif 6)

A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.048e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCTCATAGCCCT
KGGCCYCWTD-----
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTCATAGCCCT-
-CTCATTGGCCAG
A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T
A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTCATAGCCCT
-AAGATATCCTT
A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCTCATAGCCCT--
------AGGCCTNG
A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

RUNX3/MA0684.2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTCATAGCCCT
AAAACCTCAAAT----
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T A C G T A C G T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCTCATAGCCCT
ANATCAAAGNN--
A C G T A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T

KLF17/MA1514.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCTCATAGCCCT-
CACCACGCACCCCTT
A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T
G T A C G T C A T G A C T G A C G C T A G A T C T C A G G T A C C G T A T A G C T A G C G A T C T G A C G A C T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCTCATAGCCCT--
ANANNTGATACCCNATN
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCTCATAGCCCT
TTTNATTGCY--
A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCTCATAGCCCT--
ANNNATGATACCCCATC
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C