Information for 23-ACCAGGCACCTA (Motif 25)

C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C G T
p-value:1e-3
log p-value:-8.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background8.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF17/MA1514.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACCAGGCACCTA--
CACCACGCACCCCTT
A C G T C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C G T
G T A C G T C A T G A C T G A C G C T A G A T C T C A G G T A C C G T A T A G C T A G C G A T C T G A C G A C T G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACCAGGCACCTA
---TGACACCT-
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

TCF4/MA0830.2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACCAGGCACCTA----
---CGGCACCTGCCCC
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ACCAGGCACCTA-
--AAGGCAAGTGT
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:ACCAGGCACCTA
----BGCACGTA
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACCAGGCACCTA-----
-CGAAGCACACAAAATA
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SNAI2/MA0745.2/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ACCAGGCACCTA----
---ATGCACCTGTCAT
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACCAGGCACCTA-
---AAGCACTTAA
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

HIF1A/MA1106.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:ACCAGGCACCTA-
---NNGCACGTNC
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACCAGGCACCTA--
----NNCACCTGNN
C G T A A G T C A G T C C G T A A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A