Information for 21-TGAATGATCG (Motif 32)

A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T A G T C C G T A A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background101.8 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGAATGATCG
TTTGATTGATGN
A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----TGAATGATCG--
ACTATGAATGAATGAT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

ZNF24/MA1124.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TGAATGATCG
GAATGAATGAATG
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGAATGATCG
TGATKGATGR
A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGAATGATCG-
RTGATTKATRGN
A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G A C G T
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGAATGATCG--
NNANTGATTGATNTTN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TGAATGATCG
NNTNTCATGAATGT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAATGATCG-
TCAATGACCTA
A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G A C G T
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGAATGATCG--
NNANTGATTGATNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGAATGATCG
TGATTGATGA
A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C T G
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A