| p-value: | 1e-3 |
| log p-value: | -7.734e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 4.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 32.0 +/- 0.0bp |
| Average Position of motif in Background | 118.3 +/- 36.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0121.1_Foxj3_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TACGTTTTGA---- NNCTTTGTTTTGNTNNN |
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Rarg/MA0859.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TACGTTTTGA---- TTGACCTTTTGACCTT |
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Rarb/MA0857.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TACGTTTTGA----- TGACCTTTTGACCTTT |
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|
SCRT1/MA0743.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TACGTTTTGA--- NNCCACCTGTTGAANN |
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|
CHR(?)/Hela-CellCycle-Expression/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | TACGTTTTGA----- -----TTTGAAACCG |
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|
|
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TACGTTTTGA--- ---CCTTTGATGT |
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|
|
TCF7/MA0769.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TACGTTTTGA--- --TCCTTTGATGT |
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|
Nr2f6(var.2)/MA0728.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TACGTTTTGA---- TGACCTTTTGACCTC |
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|
LIN54/MA0619.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TACGTTTTGA--- ----ATTTGAATT |
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PB0082.1_Tcf3_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TACGTTTTGA------ NNTTCCTTTGATCTANA |
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