Information for 10-TTGTTGAT (Motif 32)

A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T
Reverse Opposite:
G T C A A G C T A G T C C G T A C G T A A G T C T C G A C T G A
p-value:1e-4
log p-value:-1.092e+01
Information Content per bp:1.834
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif9.17%
Number of Background Sequences with motif2777.8
Percentage of Background Sequences with motif5.74%
Average Position of motif in Targets111.5 +/- 52.8bp
Average Position of motif in Background100.5 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0011.1_HMG_class/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTGTTGAT
ATTGTT---
A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTGTTGAT
TTGTTTAC
A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TTGTTGAT
CCATTGTTNY-
A C G T A C G T A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTGTTGAT
ATTGTTA--
A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTGAT
ATTGTTTAN
A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.70
Offset:-7
Orientation:reverse strand
Alignment:-------TTGTTGAT-
ANNTCCATTGTTCNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTGAT----
NTNTTGTTGTTTGTN
A C G T A C G T A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------TTGTTGAT---
CNNNTATTGTTCNNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTTGAT---
NNNNTTTGTTTACNNT
A C G T A C G T A C G T A C G T A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTGTTGAT-
TATTGTTTATT
A C G T A C G T A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T A C G T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T