| p-value: | 1e-2 |
| log p-value: | -5.229e+00 |
| Information Content per bp: | 1.763 |
| Number of Target Sequences with motif | 31.0 |
| Percentage of Target Sequences with motif | 3.86% |
| Number of Background Sequences with motif | 1119.0 |
| Percentage of Background Sequences with motif | 2.34% |
| Average Position of motif in Targets | 113.7 +/- 57.7bp |
| Average Position of motif in Background | 99.5 +/- 60.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.33 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GTKYAMGK--- AGGTCAAGGTCA |
|
|
|
FOXF2/MA0030.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTKYAMGK--- NTTGTTTACGTTNN |
|
|
|
MYBL1/MA0776.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTKYAMGK- ACCGTTAACGGT |
|
|
|
NR6A1/MA1541.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----GTKYAMGK---- GTCAAGTTCAAGGTCAA |
|
|
|
FOXO6/MA0849.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTKYAMGK TGTTTAC-- |
|
|
|
VDR/MA0693.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTKYAMGK TGAGTTCA--- |
|
|
|
FOXI1/MA0042.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTKYAMGK TGTTTAC-- |
|
|
|
FOXD1/MA0031.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTKYAMGK ATGTTTAC-- |
|
|
|
FOXO3/MA0157.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTKYAMGK TTGTTTAC-- |
|
|
|
Nr5a2/MA0505.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GTKYAMGK----- AAGTTCAAGGTCAGC |
|
|
|