Information for 3-CTGACCAGGAGG (Motif 4)

A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.189e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CTGACCAGGAGG
TYTGACCASWRG-
A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGACCAGGAGG---
CTCCCTGGGAGGCCN
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A C G T A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTGACCAGGAGG-
---ANCAGGATGT
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCAGGAGG-
NNNNTGACCCGGCGCG
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGACCAGGAGG--
---CACAGCAGGGG
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGACCAGGAGG-
---ANCAGGAAGT
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGACCAGGAGG
CACAGCAGGGGG
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTGACCAGGAGG-
---ACVAGGAAGT
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

CTCFL/MA1102.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGACCAGGAGG---
---AGCAGGGGGCGC
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGACCAGGAGG
-TGACCT-----
A G T C A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C T G C G T A A C T G A C T G
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T