Information for 16-GAAAATCACAAC (Motif 17)

A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAAAATCACAAC-
--AAATCACAGCA
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T
A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

GFI1/MA0038.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAAAATCACAAC-
-CAAATCACTGCA
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T
A C G T A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GAAAATCACAAC
--AAACCACANN
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAAATCACAAC-----
--ATGTCACAACAACAC
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GAAAATCACAAC
--AAATCACTGC
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAAAATCACAAC----
-CAAACAACAACACCT
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAAATCACAAC---
AAAAATAACAAACGG
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAAAATCACAAC
--AAACCACAGC
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAAATCACAAC
-NAAACCACAG-
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAAAATCACAAC-
--AAACCACAGAN
A C T G C G T A C G T A C G T A C G T A A C G T A G T C C G T A A G T C C G T A C G T A A G T C A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C