Information for 4-TGGCAAACGC (Motif 25)

A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A C G T A C G T A C T G A G T C A G T C C G T A
p-value:1e-3
log p-value:-8.677e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background178.6 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAACGC
CTTGGCAA----
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAAACGC
VGCTGGCA-----
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAACGC
NTTGGCANN---
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAAACGC
NNTTGGCANN---
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAACGC
NATGGAAAAN--
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCAAACGC
TGGAAAA---
A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGGCAAACGC
CCTGGGAAAG--
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TGGCAAACGC
TACTTGGCAGA---
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAAACGC
GGTTGGCAT----
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAAACGC
CSTGGGAAAD--
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A C T G A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T