Information for 24-GGACAGGA (Motif 41)

A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A
Reverse Opposite:
C G A T A G T C A G T C A C G T A C T G A C G T A G T C A T G C
p-value:1e-1
log p-value:-4.151e+00
Information Content per bp:1.945
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif1081.2
Percentage of Background Sequences with motif2.28%
Average Position of motif in Targets106.3 +/- 50.6bp
Average Position of motif in Background102.0 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGACAGGA---
-AACAGGAAGT
A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A A C G T A C G T A C G T
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGACAGGA
-CACAGN-
A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGA---
GAAACAGGAAGT
A C G T A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A A C G T A C G T A C G T
T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGA
TTGACAGC-
A C G T A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

ETV1/MA0761.2/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGACAGGA------
AAACAGGAAGTGAA
A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A T C G A T A G C T G C A A C T G C A T G T G C A G C T A T C A G G A C T C T A G T C G A T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGACAGGA---
-NACAGGAAAT
A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A A C G T A C G T A C G T
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGACAGGA
TTGACAGG-
A C G T A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGACAGGA----
--ACAGGAAGTG
A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

MYOD1/MA0499.2/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGACAGGA----
NNGACAGGTGCNN
A C G T A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A A C G T A C G T A C G T A C G T
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GGACAGGA
CCAGGAACAG--
A C G T A C G T A C G T A C G T A T C G A C T G C G T A A G T C C G T A A C T G A C T G G C T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T