Information for 2-CAAGATCA (Motif 19)

A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G A T A G T C A C G T A C G T A C T G
p-value:1e-4
log p-value:-9.215e+00
Information Content per bp:1.902
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif2869.8
Percentage of Background Sequences with motif3.08%
Average Position of motif in Targets66.3 +/- 61.9bp
Average Position of motif in Background100.6 +/- 87.8bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRA/MA0592.3/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CAAGATCA--
GCTCAAGGTCACA
A C G T A C G T A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T A C G T
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CAAGATCA--
TCAAGGTCATA
A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CAAGATCA-
TCAAGGTCAN
A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:4
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CAAGATCA-----
TATTCAAGGTCATGCGA
A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CAAGATCA-
TCAAGGTCAT
A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--CAAGATCA
BTCAAGGTCA
A C G T A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CAAGATCA-
-AAGGTCAC
A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CAAGATCA
NTCAAGGTCA
A C G T A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

NR5A1/MA1540.1/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CAAGATCA-
GTCAAGGTCAC
A C G T A C G T A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CAAGATCA--
CAAGGHCANV
A G T C G T C A C G T A A C T G G C T A A C G T A G T C C G T A A C G T A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G