| p-value: | 1e-12 |
| log p-value: | -2.800e+01 |
| Information Content per bp: | 1.753 |
| Number of Target Sequences with motif | 19.0 |
| Percentage of Target Sequences with motif | 2.12% |
| Number of Background Sequences with motif | 107.8 |
| Percentage of Background Sequences with motif | 0.23% |
| Average Position of motif in Targets | 114.2 +/- 48.0bp |
| Average Position of motif in Background | 105.3 +/- 56.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.8 |
| Multiplicity (# of sites on avg that occur together) | 2.63 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTTTAGGGTTTT NGANTTTTATGGCTCN |
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PH0047.1_Hoxa11/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTTAGGGTTTT- NNGTTTTACGACTTTA |
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Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAGGGTTTT TTTTATGGCB-- |
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PH0066.1_Hoxc11/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTTAGGGTTTT- NNNTTTTACGACNTTN |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTTAGGGTTTT DGWTTTATGRCN-- |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTTTAGGGTTTT TTTTATGGCM-- |
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HOXD12/MA0873.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTTAGGGTTTT NTTTTACGACT-- |
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HOXD10/MA1506.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTTAGGGTTTT NTTTTACGACC-- |
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PH0065.1_Hoxc10/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTTAGGGTTTT- ANNTTTTACGACNTNN |
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HOXC12/MA0906.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTTAGGGTTTT NTTTTACGACC-- |
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