Information for 1-TGTAGCTA (Motif 37)

A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A
Reverse Opposite:
A C G T C G T A A T C G G T A C G A C T C G T A A G T C C G T A
p-value:1e-2
log p-value:-6.575e+00
Information Content per bp:1.927
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif4548.0
Percentage of Background Sequences with motif5.99%
Average Position of motif in Targets71.9 +/- 47.5bp
Average Position of motif in Background99.2 +/- 78.9bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRTA2/MA1478.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTA--
AATGTAACAATT
A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T
T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

DMRTC2/MA1479.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTA--
AATGTATCAATT
A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTAGCTA-
AATGTATCAAT
A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTAGCTA---
CTGTTGCTAGGS
A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

RFX1/MA0509.2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGTAGCTA-----
CTGTTGCTATGGCA
A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------TGTAGCTA---------
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTA-----
NCCGTTGCTANGNGN
A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTA-----
NNCGTTGCTATGGNN
A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0159.1_Rfx4_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTAGCTA-----
NNNGTAACTANGNNA
A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTAGCTA
NATGTTGCAA
A C G T A C G T A C G T A C T G A C G T C T G A A C T G A T G C A C G T C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A