Information for 20-GTCACCCTACTA (Motif 28)

A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T C G T A A C T G A C T G A C T G A C G T A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.332e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCACCCTACTA
CNGTCACGCCAC--
A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTCACCCTACTA
ATCACCCCAC--
A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCACCCTACTA
ATCACCCCAT--
A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTCACCCTACTA-
---CACCTACTAT
A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCACCCTACTA
ATCACCCCAT--
A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTCACCCTACTA-----
--RGMCCTACTRTGTGC
A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCACCCTACTA
TTCCCCCTAC--
A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCACCCTACTA
NNGGTCACGCTC---
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTCACCCTACTA-
NNCNTGACCCCGCTCT
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCACCCTACTA
GTGCCACGCGACTG
A C G T A C G T A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C A C G T C G T A
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G