Information for 23-CAGTTTAGCC (Motif 47)

A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A C G T A C G T A A G T C A C G T A C T G
p-value:1e-1
log p-value:-3.867e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.5 +/- 53.8bp
Average Position of motif in Background86.1 +/- 42.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTTAGCC
BRRCVGTTDN---
A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTTAGCC
ANCGTTTANN-
A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTTAGCC-
NCNGTGTAGACG
A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

GATA1/MA0035.4/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTTAGCC
NNAGATTAGAN
A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGTTTAGCC
NCGTTTAN--
A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGTTTAGCC----
WCATTTTGKCCTCYT
A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTTAGCC
NNCAGTTGNN--
A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T

MYBL2/MA0777.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTTAGCC---
GACNGTTTAACGGTT
A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGTTTAGCC
-GGATTAGC-
A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CAGTTTAGCC
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G