Information for 8-CTATAGGAACAG (Motif 13)

A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C G T A G T C A G T C A C G T C G T A A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX1/MA0509.2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTATAGGAACAG
TNCCATAGCAACNN
A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CTATAGGAACAG--
----TGGAACAGMA
A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CTATAGGAACAG---
-----GGAACAGCCG
A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTATAGGAACAG
--CCAGGAACAG
A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

RFX3/MA0798.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTATAGGAACAG
TNCCATAGCAACNN
A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

ZNF341/MA1655.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CTATAGGAACAG----
----GGGAACAGCCAC
A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

PRDM4/MA1647.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTATAGGAACAG--
---NAGAAACAGNN
A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTATAGGAACAG
SCCTAGCAACAG
A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTATAGGAACAG
GCTAARTAAACA-
A C G T A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G
A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A A C G T

RFX7/MA1554.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTATAGGAACAG
--NTAGCAACG-
A G T C A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A G T C C G T A A C T G
A C G T A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T