Information for 10-TGTTAGGTCCWA (Motif 12)

C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A
Reverse Opposite:
C G A T C G T A A C T G C T A G T C G A A G T C A G T C C G A T C G T A C T G A T A G C G C T A
p-value:1e-5
log p-value:-1.284e+01
Information Content per bp:1.664
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif601.0
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets97.0 +/- 59.1bp
Average Position of motif in Background102.6 +/- 70.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTTAGGTCCWA
--CAAAGKTCAA
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A
A C G T A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTTAGGTCCWA---
GGCAAAAGTCCAATAA
A C G T C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGTTAGGTCCWA-
-----AGGCCTAG
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

HNF4A/MA0114.4/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTTAGGTCCWA-
TCCAAAGTCCAAA
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGTTAGGTCCWA-
TCCAAAGTCCAGA
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGTTAGGTCCWA-----
--BCNGGTTCTAGANCN
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

ZNF449/MA1656.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGTTAGGTCCWA----
--CCAAGCCCAACCAG
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGTTAGGTCCWA
-NTCAAGGTCA-
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGTTAGGTCCWA------
-CTAAGGTTCTAGATCAC
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TGTTAGGTCCWA-
-----AGGCCTNG
C G A T A C T G A G C T G A C T G C T A C T A G A C T G A C G T A G T C G T A C C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G