Information for 20-ATCTTTTGAGTA (Motif 21)

C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C C G T A C G T A C G T A C G T A A C T G C G T A A C G T
p-value:1e-4
log p-value:-9.244e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background99.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATCTTTTGAGTA--
---NNTTGAGTGNN
C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

NKX2-2/MA1645.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCTTTTGAGTA----
--NNNTTGAGTGGNNN
C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATCTTTTGAGTA---
---NTTTCATTRCHD
C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATCTTTTGAGTA-----
-TCTTTCGAGGAATTTG
C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

PHOX2B/MA0681.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTTTGAGTA--
NNATAATTTGATTANN
A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

MSANTD3/MA1523.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATCTTTTGAGTA---
-----GTGAGTGNAC
C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

PH0117.1_Nkx3-1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATCTTTTGAGTA-------
--NATTTAAGTACTTANNA
C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

MEF2A/MA0052.4/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ATCTTTTGAGTA
NNTCTATTTTTAGNN
A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTTTGAGTA---
ANTCCTTTGTCTNNNN
A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ATCTTTTGAGTA
---ATTTGAATT
C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T