Information for 9-AGGGCATGCC (Motif 22)

C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C
Reverse Opposite:
C T A G C T A G A T G C G C T A A C G T A C T G A G T C G T A C G A T C A C G T
p-value:1e-6
log p-value:-1.564e+01
Information Content per bp:1.846
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.09%
Number of Background Sequences with motif151.1
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets83.0 +/- 57.4bp
Average Position of motif in Background93.2 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGCATGCC-
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCATGCC
NGTGGGCAT---
A C G T A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCATGCC---
AAGGTCATGACCTT
A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C A C G T A C G T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGGGCATGCC---
AAGGTCATGACCTT
A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C A C G T A C G T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGGCATGCC
TRAGGTCA----
A C G T A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGGCATGCC---
GAGGTCATGACCTC
A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C A C G T A C G T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGGCATGCC-
---ACATTCCA
C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C A C G T
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGCATGCC
NBYCAAGGTCAC---
A C G T A C G T A C G T A C G T A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGGGCATGCC---
---RCATTCCWGG
C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGGCATGCC
TNNGGGCAG---
A C G T A C G T C G T A C A T G A C T G C T A G A G T C C G T A C G A T A T C G A G T C G A T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T