Information for 6-TAGCTBTCATGA (Motif 7)

A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G C T G A T A C G C T G A A C T G A T G C A C G T C G T A
p-value:1e-4
log p-value:-1.131e+01
Information Content per bp:1.781
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif45.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets82.0 +/- 43.0bp
Average Position of motif in Background108.4 +/- 76.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TAGCTBTCATGA---
-----ATAATGAGGT
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

HOXB4/MA1499.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TAGCTBTCATGA-
-----NTAATGAT
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T

NKX6-3/MA1530.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TAGCTBTCATGA-
----TTTAATGAN
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAGCTBTCATGA----
--NNTNTCATGAATGT
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

HOXA4/MA1496.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TAGCTBTCATGA-
-----NTAATGAC
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C

HOXC4/MA1504.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TAGCTBTCATGA-
-----NTAATGAN
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

HOXD4/MA1507.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TAGCTBTCATGA-
-----NTAATGAN
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T

HOXA5/MA0158.2/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TAGCTBTCATGA-
-----GTAATTAC
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T G T C A C G T A A C G T A C G T C T G A T A G C

HOXB5/MA0904.2/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TAGCTBTCATGA-
-----GTAATTAC
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T G T C A C G T A A C G T A C G T C T G A A T G C

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGCTBTCATGA---
-----NTAATGAGCT
A C G T G T C A A T C G G T A C A G C T A G T C A G C T G T A C G T C A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T