Information for 2-CAGGAGGGAACC (Motif 2)

A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A G T C A T G C A G T C A C G T A G T C A G T C A C G T A C T G
p-value:1e-14
log p-value:-3.444e+01
Information Content per bp:1.972
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.4 +/- 60.0bp
Average Position of motif in Background162.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAGGAGGGAACC
CWGGCGGGAA--
A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T

E2F6/MA0471.2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CAGGAGGGAACC
GGGGGCGGGAAGG
A C G T A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

TFDP1/MA1122.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGGAGGGAACC
-GGGCGGGAAGG
A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
A C G T T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGGAGGGAACC
--GGCGGGAARN
A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGGAGGGAACC-
-TGGCGGGAAAHB
A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGAGGGAACC
CACAGCAGGGG---
A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGGAGGGAACC----
GCTGGGGGGTACCCCTT
A C G T A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGGAGGGAACC
DCHCAGCAGGRGGCC
A C G T A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGGAGGGAACC
BTKGGCGGGAAA-
A C G T A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGGAGGGAACC
CACAGCAGGGGG--
A C G T A C G T A G T C C G T A A C T G A C T G C G T A A C T G A T C G A C T G C G T A C G T A A G T C A G T C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T