Information for 11-CTGTATTTAAAG (Motif 27)

A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.998e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets164.0 +/- 0.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTGTATTTAAAG
---NATTCAAAT
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGTATTTAAAG-
-TCTATTTATAGN
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGTATTTAAAG
--CTATTTTTGG
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGTATTTAAAG-
-GCTATTTATAGC
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGTATTTAAAG-
-KCTATTTTTRGH
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

LMX1A/MA0702.2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGTATTTAAAG
--NTAATTAA--
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G
A C G T A C G T A C G T A G C T C G T A C T G A A C G T A C G T T C G A T C G A A C G T A C G T

LMX1B/MA0703.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGTATTTAAAG-
--TTAATTAAANT
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T
A C G T A C G T C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGTATTTAAAG-
-GCTATTTTTAGC
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2A/MA0052.4/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTATTTAAAG--
NNTCTATTTTTAGNN
A C G T A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTGTATTTAAAG
--GTAATTACHN
A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G
A C G T A C G T A T C G A G C T C G T A C G T A A C G T A C G T C T G A T G A C G T C A A G C T