Information for 2-AGAATCTWMTGG (Motif 2)

T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G
Reverse Opposite:
G A T C A G T C C G T A A C G T C G A T C G T A A T C G C G T A C G A T A C G T A G T C A G C T
p-value:1e-7
log p-value:-1.776e+01
Information Content per bp:1.771
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif429.1
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets132.6 +/- 54.0bp
Average Position of motif in Background99.6 +/- 71.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGAATCTWMTGG--
---NNCTAATGGNN
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGAATCTWMTGG--
TAGAANVTTCTAGAA
A C G T T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGAATCTWMTGG--
NNTTCTGGAANNTTCTAGAA
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGAATCTWMTGG--
-GAANNTTCTAGAA
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGAATCTWMTGG----
NGANTTTTATGGCTCN
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

ZNF317/MA1593.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGAATCTWMTGG--
--NNTCTGCTGTNA
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T
A C G T A C G T C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A

NKX6-3/MA1530.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGAATCTWMTGG-
----TTTAATGAN
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T
A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAATCTWMTGG------
-GANTATTATGGGATGGA
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

HSF1/MA0486.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAATCTWMTGG--
-GAACGTTCTAGAA
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAATCTWMTGG--
-GAANGTTCTAGAA
T C G A A C T G C G T A G C T A C G A T A T G C A C G T C G T A G T C A A C G T A C T G C A T G A C G T A C G T
A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A