Information for 13-AACTATAGGG (Motif 33)

C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T C G T A A C G T C G T A A C T G A C G T A C G T
p-value:1e-3
log p-value:-7.109e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background69.2 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AACTATAGGG
GAACAATGG--
A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AACTATAGGG------
TGCGCATAGGGGAGGAG
A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AACTATAGGG--
TAGTGAACAATAGATTT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACTATAGGG
AGAACAATGG--
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACTATAGGG
GAACAATGGN-
A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AACTATAGGG-
NNNNNGAACAATTGANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AACTATAGGG-----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SOX15/MA1152.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AACTATAGGG
AAAACAATAG--
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AACTATAGGG
VVRRAACAATGG--
A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AACTATAGGG
NAACAAT----
A C G T C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C T G A C T G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T