Information for 2-CTGAATCAAGGC (Motif 2)

A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C
Reverse Opposite:
C T A G A G T C A G T C A C G T A C G T C T A G C G T A A C G T C G A T A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.418e+01
Information Content per bp:1.858
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets107.3 +/- 56.8bp
Average Position of motif in Background98.2 +/- 88.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGAATCAAGGC
TATCATAATTAAGGA
A C G T A C G T A C G T A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTGAATCAAGGC
AATGTATCAAT--
A C G T A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGAATCAAGGC
TGCTGAGTCA----
A C G T A C G T A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTGAATCAAGGC
----ATTAAA--
A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTGAATCAAGGC---
----GTCAAGGTCAC
A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CTGAATCAAGGC--
----NTCAAGGTCA
A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGAATCAAGGC-
GGACTGAATTCATGCC
A C G T A C G T A C G T A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PH0026.1_Duxbl/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTGAATCAAGGC--
CGACCCAATCAACGGTG
A C G T A C G T A C G T A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

BACH1/MA1633.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGAATCAAGGC
NTGCTGAGTCATN--
A C G T A C G T A C G T A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C
C G A T C G A T A T C G T G A C G A C T C A T G G C T A A T C G A C G T T G A C T C G A A G C T T A G C A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTGAATCAAGGC--
----BTCAAGGTCA
A G T C C G A T A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C T G C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A