Information for 10-TTCACACCATCA (Motif 11)

A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C T G A C G T A C T G C G T A C G T A
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX18/MA1565.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACCATCA
NTTCACACCTCC-
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C A C G T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTCACACCATCA
TTCACACCTT--
A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTCACACCATCA-
NNTTTTCACACCTTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTCACACCATCA
NTTTTCACACCTT--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACCATCA
TTTCACACCTN--
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTCACACCATCA
ATCACCCCAT--
A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACCATCA
CTTCACACCTA--
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTCACACCATCA
TTMACACCTT--
A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACCATCA
TTTCACACCT---
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACCATCA
TTTCACACCT---
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T A G T C C G T A
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T