Information for 3-GATCCAAGCATG (Motif 3)

A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G
Reverse Opposite:
G T A C C G T A A C G T A C T G A G T C A C G T C G A T C T A G A C T G C G T A G C A T A G T C
p-value:1e-5
log p-value:-1.323e+01
Information Content per bp:1.796
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif843.3
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets71.2 +/- 55.2bp
Average Position of motif in Background105.8 +/- 83.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.4/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GATCCAAGCATG-
-ATGTAAACATGT
A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G A C G T
A C G T C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GATCCAAGCATG
----CAAGCTT-
A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G
A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GATCCAAGCATG
BCWGATTCAATCAAN
A C G T A C G T A C G T A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G
A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATCCAAGCATG
-AAATAAACA--
A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GATCCAAGCATG
BTVATTWGCATA
A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

PH0014.1_Cphx/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GATCCAAGCATG
ATGATCGAATCAAA
A C G T A C G T A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G
C T G A C G A T T C A G C G T A C A G T A T G C T A C G T G C A G T C A G A C T A G T C C G T A T C G A G C T A

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GATCCAAGCATG-
-ATGTAAACADGS
A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G A C G T
A C G T C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GATCCAAGCATG
---CCAATCAA-
A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GATCCAAGCATG---
AACACCAAAACAAAGGA
A C G T A C G T A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GATCCAAGCATG-
--AATAAACAATN
A C T G C G T A C G A T G T A C A G T C C G T A C G T A C T A G A G T C C G T A A C G T C A T G A C G T
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A