Information for 19-TTTAAGGACAAT (Motif 26)

A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.385e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background145.4 +/- 38.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTTAAGGACAAT-----
-TTAAGAACAATAAATT
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTAAGGACAAT--
NTTNAGAACAATTA
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTTAAGGACAAT-----
-TTTAGAACAATAAAAT
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.66
Offset:6
Orientation:reverse strand
Alignment:TTTAAGGACAAT---
------GACAATGNN
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTAAGGACAAT----
NNTNANAACAATTNNA
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTAAGGACAAT------
-TNNAGAACAATANATNN
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0183.1_Sry_2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTAAGGACAAT-----
TCACGGAACAATAGGTG
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAGGACAAT
NTTTTACGAC---
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTAAGGACAAT
--TRAGGTCA--
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTAAGGACAAT-----
NNNNNGAACAATTGANN
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T