Information for 20-TGGACACTCG (Motif 31)

A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C G T A C T G A C G T A G T C A G T C C G T A
p-value:1e-3
log p-value:-7.076e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets167.0 +/- 0.0bp
Average Position of motif in Background82.7 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGGACACTCG-
-GTACACTCAC
A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGACACTCG-
-AASCACTCAA
A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGGACACTCG--
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGACACTCG
AATGGAAAAT--
A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGGACACTCG-
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGGACACTCG--
--RSCACTYRAG
A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NFATC4/MA1525.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGACACTCG
AATGGAAAAT--
A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGGACACTCG---
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGGACACTCG--
---CCACTTGAA
A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGACACTCG-
-MRSCACTYAA
A C G T A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C T G A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A