Information for 19-GCATTGGATARC (Motif 29)

A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T C G T A A C G T A G T C A G T C C G T A G T C A A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.129e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets91.9 +/- 60.6bp
Average Position of motif in Background85.8 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCATTGGATARC-
NNATTGCATAANN
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C A C G T
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCATTGGATARC
---GTGGAT---
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCATTGGATARC
----TGGAAAA-
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C
A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

HLF/MA0043.3/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCATTGGATARC--
NNGTTGCATAACNN
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C A C G T A C G T
G C A T C A G T T C A G G A C T C A G T C T A G G A T C T C G A G A C T G T C A C G T A A G T C G T C A G C T A

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCATTGGATARC
CTCATTGGCCAG-
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCATTGGATARC
TGATTGGCTANN
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCATTGGATARC
--VTTRCATAAY
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C
A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCATTGGATARC
--AATGGAAAAT
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C
A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCATTGGATARC-
-----AGATAASR
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

GATA3/MA0037.3/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCATTGGATARC-
-----AGATAAGA
A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A C T G A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A