Information for 11-CGMTCGCT (Motif 38)

A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T
Reverse Opposite:
C T G A A T C G A T G C A C T G C G T A A C G T G A T C T A C G
p-value:1e-4
log p-value:-1.069e+01
Information Content per bp:1.740
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif506.9
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets93.8 +/- 54.4bp
Average Position of motif in Background98.3 +/- 53.4bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGMTCGCT-
----NGCTN
A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGMTCGCT--
DGATCRATAN
A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T A C G T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGMTCGCT-
NTNATCGATA
A C G T A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGMTCGCT----
VCCTCTCTGDDY
A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T A C G T A C G T A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGMTCGCT--
TAATCGATAA
A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T A C G T
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CTCFL/MA1102.2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CGMTCGCT---
GCGCCCCCTGNN
A C G T A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T A C G T A C G T
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGMTCGCT---
NNAATTCTCGNTNAN
A C G T A C G T A C G T A C G T A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGMTCGCT-----
NTCGCGCGCCTTNNN
A C G T A C G T A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGMTCGCT
GGCGCGCT
A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

CUX2/MA0755.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGMTCGCT--
TAATCGATAA
A T G C C T A G T G C A G C A T A G T C T A C G A T G C A G C T A C G T A C G T
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A