Information for 3-GCTMACTGTGTT (Motif 3)

C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T
Reverse Opposite:
C T G A C T G A A G T C G T C A T A G C T C G A C T A G A C G T C A T G C T G A C T A G G A T C
p-value:1e-6
log p-value:-1.530e+01
Information Content per bp:1.686
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif98.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets89.0 +/- 64.0bp
Average Position of motif in Background110.4 +/- 85.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dmrt1/MA1603.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTMACTGTGTT--
-GNTACTTTGTATC
C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T A C G T
A C G T C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTMACTGTGTT--
---NNCTTTGTTNN
C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTMACTGTGTT-
RGMCCTACTRTGTGC
A C G T A C G T C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCTMACTGTGTT--
NNNCCATTGTGTNAN
A C G T C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

MYBL1/MA0776.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTMACTGTGTT
ACCGTTAACGGT---
A C G T A C G T A C G T C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTMACTGTGTT-
---NCCTTTGTTC
C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T
A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

NR1D2/MA1532.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCTMACTGTGTT--
GGGTTAGTGGGTCAT
A C G T C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T A C G T
T C A G C A T G C A T G A C G T G A C T C G T A A T C G A C G T C T A G C A T G C T A G C A G T A G T C C T G A C A G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTMACTGTGTT--
----YCTTTGTTCC
C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTMACTGTGTT---
NGGTACACNGTGTTCCC
A C G T A C G T C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T A C G T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCTMACTGTGTT---
GGGAACATTGTGTTCCC
A C G T A C G T C A T G A G T C A G C T G T A C C G T A A G T C A C G T A C T G A C G T A C T G A G C T A G C T A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C