Information for 3-CCCTACTWTCTC (Motif 3)

A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A C T G A C T A G A G C T C G T A T A C G A C T G A C T G
p-value:1e-13
log p-value:-3.090e+01
Information Content per bp:1.835
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.8 +/- 35.4bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CCCTACTWTCTC--
---TTCTTTCTCTT
A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCCTACTWTCTC
CACCTACTAT---
A C G T A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCCTACTWTCTC----
----ACTTTCACTTTC
A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTACTWTCTC----
NNNCTGATATCTCNNNN
A C G T A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCCTACTWTCTC
-NNTCTTATCT-
A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C
A C G T A C T G T C G A A C G T A G T C A G C T C G A T C G T A A C G T A G T C C G A T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCCTACTWTCTC
---YSTTATCT-
A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CCCTACTWTCTC------
---AGTATTCTCGGTTGC
A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

GATA3/MA0037.3/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCCTACTWTCTC
---TCTTATCT-
A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T A G C T A T G C G A C T C G A T C G T A A C G T A G T C C G A T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCCTACTWTCTC------
NNTNANTTCTTATCTCTANANN
A C G T A C G T A C G T A C G T A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCCTACTWTCTC-
RGMCCTACTRTGTGC
A C G T A C G T A G T C A G T C A T G C A C G T C T G A G A T C A G C T C G A T A C G T A G T C A C G T A G T C A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C