Information for 5-GTGCGAGATT (Motif 9)

A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A C G T A G T C A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.411e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTGCGAGATT---
GNNACCGAGAATNNN
A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

ZNF75D/MA1601.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTGCGAGATT
ATGTGGGAAA--
A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGCGAGATT---
TTGACCGAGAATTCC
A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGCGAGATT
AGGTGHCAGACA
A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GTGCGAGATT--
CTAAGGTTCTAGATCAC
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGCGAGATT---
NNNACCGAGAGTNNN
A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTGCGAGATT-
AGGTGNCAGACAG
A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GTGCGAGATT-
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGCGAGATT
AAGGTGTGAAAAT
A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTGCGAGATT
AGGTGTGA----
A C G T A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C T G C G T A A C G T A C G T
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T