| p-value: | 1e-3 |
| log p-value: | -8.307e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.69% |
| Number of Background Sequences with motif | 1.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 19.0 +/- 0.0bp |
| Average Position of motif in Background | 28.6 +/- 12.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0017.1_Cux1_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATGAGCATCAG-- TAGTGATCATCATTA |
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POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AATGAGCATCAG ATAATGAGGT---- |
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POU6F2/MA0793.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGAGCATCAG NTAATGAGCT---- |
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PH0151.1_Pou6f1_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------AATGAGCATCAG GACGATAATGAGCTTGC- |
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POU3F1/MA0786.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATGAGCATCAG TAATTTGCATAA- |
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|
|
POU3F3/MA0788.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATGAGCATCAG AAATTAGCATAAT |
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|
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POU3F2/MA0787.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATGAGCATCAG TAATTTGCATAA- |
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Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGAGCATCAG BTVATTWGCATA-- |
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PH0152.1_Pou6f1_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------AATGAGCATCAG AAACATAATGAGGTTGC- |
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NR1H4/MA1110.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AATGAGCATCAG TCAATGACCTA--- |
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