Information for 8-CCCAATTAGT (Motif 26)

A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.666e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets13.0 +/- 0.0bp
Average Position of motif in Background88.3 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0089.1_Isx/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CCCAATTAGT---
ACTCCTAATTAGTCGT
A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

MSX2/MA0708.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CCCAATTAGT
-CCAATTAA-
A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

MSX1/MA0666.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CCCAATTAGT
-CCAATTAG-
A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CCCAATTAGT
AACCAATTAAT
A C G T A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

GBX1/MA0889.1/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CCCAATTAGT
ACTAATTAGC
A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

Msx3/MA0709.1/Jaspar

Match Rank:6
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CCCAATTAGT
-CCAATTAA-
A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T

EN2/MA0642.1/Jaspar

Match Rank:7
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCCAATTAGT
CCCAATTAGC
A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

LBX2/MA0699.1/Jaspar

Match Rank:8
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CCCAATTAGT
GCCAATTAGC
A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C

PH0033.1_Gbx1/Jaspar

Match Rank:9
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CCCAATTAGT----
TNCACTAATTAGTNNNN
A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T G C A T G A C T G C A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A G C T A C T G T A C G G A T C C G T A

EN1/MA0027.2/Jaspar

Match Rank:10
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCCAATTAGT
-CTAATTAG-
A G T C A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T