Information for 7-CTGGGAGAGAAA (Motif 9)

A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A G T C C G T A A C T G
p-value:1e-3
log p-value:-9.153e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background183.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTGGGAGAGAAA---
----NAGAGAAAGNA
A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGAGAGAAA-----
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTGGGAGAGAAA--
--GGAAGTGAAAST
A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGAGAGAAA-----
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTGGGAGAGAAA--
--GAAAGTGAAAGT
A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGGAGAGAAA-
-CGGAAGTGAAAC
A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGGGAGAGAAA--
--GRAASTGAAAST
A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGGGAGAGAAA
BTKGGCGGGAAA
A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTGGGAGAGAAA--
GTATTGGGTGGGTAATT
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

ZNF75D/MA1601.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGGGAGAGAAA
ATGTGGGAAA----
A C G T A C G T A G T C A C G T A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T A C G T A C G T