Information for 12-CCTAGCTATC (Motif 28)

A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C T G A G T C A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.261e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background93.4 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTAGCTATC-----
GACAGAGATATCAGTGT
A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTAGCTATC
ACTAGTTAAC
A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTAGCTATC----
ANNNCTAGTTAACNGNN
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCTAGCTATC---
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTAGCTATC--
TACCCTAGTTACCGA
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGCTATC------
NNNCAGCTGTCAATATN
A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCTAGCTATC--
TACCATAGCAACGGT
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CCTAGCTATC------
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTAGCTATC-----
AACTAGCTGTCAATAC
A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCTAGCTATC
TGTTKCCTAGCAACM
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T C G T A A C G T A G T C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C