Information for 20-CAAAGAGATGTA (Motif 21)

A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-8.301e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background43.8 +/- 12.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ptf1a/MA1618.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAAGAGATGTA--
-AAACAGATGTTTA
A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T
A C G T C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAAGAGATGTA
AAAACAAAGAA-----
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAAAGAGATGTA
-AAGGATATNTN
A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAAAGAGATGTA-----
AAAATACATGTAAAAAT
A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGAGATGTA
ANATCAAAGNN-----
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAAGAGATGTA
--AACAGATGGT
A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAAGAGATGTA-----
TAAATACATGTAAAATT
A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

HAND2/MA1638.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAAAGAGATGTA
--ACCAGATGGC
A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

MSC/MA0665.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAAGAGATGTA
--AACAGCTGTT
A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
A C G T A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

SOX4/MA0867.2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAAAGAGATGTA
GAACAAAGGG-----
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C G T C G T A
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T A C G T A C G T A C G T