Information for 2-GATCTCGGCA (Motif 3)

A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C T G C G T A A C T G C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.019e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GATCTCGGCA--
-TACTTGGCAGA
A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GATCTCGGCA--
--NNTTGGCANN
A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GATCTCGGCA
AAATCACTGC-
A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

GFI1/MA0038.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATCTCGGCA
CAAATCACTGCA
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A
A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATCTCGGCA
AAATCACAGCA
A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GATCTCGGCA
WDNCTGGGCA
A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GATCTCGGCA--
AGTATTCTCGGTTGC
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GATCTCGGCA--
ACCACTCTCGGTCAC
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GATCTCGGCA-
---CTTGGCAA
A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GATCTCGGCA--
NNAATTCTCGNTNAN
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A G T C A C T G A C T G A G T C C G T A A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A