Information for 4-TTAACTACCG (Motif 14)

A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T C G T A A C T G A C G T A C G T C G T A C G T A
p-value:1e-3
log p-value:-7.945e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background86.5 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----TTAACTACCG--
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTAACTACCG
GTTAACTAGN-
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TTAACTACCG-
ACTTAGTTAACTAAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

HOXB7/MA1501.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTAACTACCG
GNTAATTACC-
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G
A T C G A G C T A G C T C G T A G T C A A C G T A C G T T C G A G T A C A G T C A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TTAACTACCG-
CCTTAGTTAACTAAAAT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTAACTACCG--
NNAATTAATGACCNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

LMX1A/MA0702.2/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTAACTACCG
TTAATTAA--
A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G
A G C T A G C T C G T A G T C A A G C T A C G T T C G A T G C A A C G T A C G T

HOXA6/MA1497.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTAACTACCG
NNTAATTACN-
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G
T A C G G A C T G C A T G C T A C G T A A G C T C A G T T C G A T A G C T G A C A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTAACTACCG---
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTAACTACCG---
GTTAATTANCTCNN
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A A G T C A G T C A C T G A C G T A C G T A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A