Information for 3-GTCTGAAACG (Motif 11)

A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.592e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background130.7 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTCTGAAACG-
-ACTGAAACCA
A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

ZBTB12/MA1649.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTCTGAAACG-
ATCTGGAACCC
A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGAAACG-
TGTCTGDCACCT
A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAAACG
AGGTGTGAAA--
A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAAACG
AGGTGTGAAA--
A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAAACG
TWGTCTGV----
A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAAACG
CTGTCTGG----
A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTCTGAAACG
VBSYGTCTGG----
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTCTGAAACG-
-TTTGAAACCG
A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0013.1_Eomes_1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GTCTGAAACG-
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C T G A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T