Information for 3-GCGCATTG (Motif 37)

A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C T G A G T C A C T G A G T C
p-value:1e-2
log p-value:-6.281e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background107.3 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX18/MA1563.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GCGCATTG--
--GCATTGTN
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCGCATTG---
GCCGCGCAGTGCGT
A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCGCATTG------
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGCATTG---
NNCCATTGTNN
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCGCATTG--
-CTCATTGTC
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCGCATTG----
--CCWTTGTYYB
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCGCATTG----
--CCATTGTTYB
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

NFYB/MA0502.2/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCGCATTG-----
-CTCATTGGCCAG
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

SOX2/MA0143.4/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGCATTG---
NNCCATTGTNN
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCGCATTG---
-CCGATTGGCT
A C T G A G T C A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T