| p-value: | 1e-3 |
| log p-value: | -8.288e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.25% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 50.0 +/- 0.0bp |
| Average Position of motif in Background | 163.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CACAAAAGACAC BMRVACAAWGGV--- |
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|
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CACAAAAGACAC RACAAWGG---- |
|
|
|
Sox3/MA0514.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CACAAAAGACAC AAAACAAAGG---- |
|
|
|
SOX15/MA1152.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CACAAAAGACAC AAAACAATAG---- |
|
|
|
PH0164.1_Six4/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CACAAAAGACAC------ -ATAAATGACACCTATCA |
|
|
|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CACAAAAGACAC CGAAGCACACAAAATA- |
|
|
|
PB0071.1_Sox4_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CACAAAAGACAC AGAAGAACAAAGGACTA |
|
|
|
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CACAAAAGACAC- -ACAAAGGNBCCT |
|
|
|
Nr2e1/MA0676.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CACAAAAGACAC ---AAAAGTCAA |
|
|
|
PB0061.1_Sox11_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CACAAAAGACAC ATAAGAACAAAGGACTA |
|
|
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