Information for 5-AATTTGAGCG (Motif 13)

C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T
p-value:1e-3
log p-value:-9.056e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AATTTGAGCG--
-NNTTGAGTGNN
C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T
A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

NKX2-2/MA1645.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AATTTGAGCG----
NNNTTGAGTGGNNN
C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATTTGAGCG
GWAAYHTGABMC
A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AATTTGAGCG---
--CTTGAGTGGCT
C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PH0127.1_Nobox/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AATTTGAGCG
GNTNNCTAATTAGNNCG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G
T A C G C T G A C G A T C G T A T G A C A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A G T C A T C G T A G C A T C G

PAX4/MA0068.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATTTGAGCG
CTAATTAG----
A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G
A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AATTTGAGCG---
---TTGAGTGSTT
C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATTTGAGCG
AAATCACTGC-
A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AATTTGAGCG
NNTAATTAGA---
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G
A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AATTTGAGCG--
--BTBRAGTGSN
C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C