Information for 11-ACCTAGGTTG (Motif 32)

C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T
p-value:1e-3
log p-value:-8.226e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background60.6 +/- 92.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACCTAGGTTG----
TCGCGAAGGTTGTACT
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACCTAGGTTG
TGACCTARTT--
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACCTAGGTTG
TGACCTARTT--
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACCTAGGTTG-
TTGACCTANTTATN
A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACCTAGGTTG
BTGACCTAVTTW-
A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------ACCTAGGTTG
NNHYTGACCTAGWTT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACCTAGGTTG-----
CTACTAGGATGTNNTN
A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

RORC/MA1151.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACCTAGGTTG
TGACCTANTTAN
A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACCTAGGTTG-
GCACCCCTGGGTGCC
A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACCTAGGTTG
GACATATGTT-
A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T