Information for 15-GAACTAACCT (Motif 34)

A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C G T C G T A A C T G A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.001e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif33.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background90.2 +/- 98.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAACTAACCT-
NNACTTACCTN
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

GATA1/MA0035.4/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAACTAACCT--
-TTCTAATCTAT
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

NR1I3/MA1534.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAACTAACCT
ATGAACTTT---
A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAACTAACCT
RGGGCACTAACY-
A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAACTAACCT------
----TGACCTYTGVMC
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAACTAACCT--
----TGACCTYA
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAACTAACCT-
---NTGACCTN
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C

NR2F2/MA1111.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAACTAACCT---
--NNTGACCTTTN
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

VDR/MA0693.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAACTAACCT
TGAACTCA---
A C G T A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAACTAACCT----
----TGACCTTGAT
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T