Information for 7-CYWWGWRGGTTT (Motif 8)

A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A T G C A A G T C A G T C G A C T C G T A A G T C C G T A C G T A C T G A A C T G
p-value:1e-4
log p-value:-1.144e+01
Information Content per bp:1.823
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif37.8
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets77.5 +/- 65.5bp
Average Position of motif in Background112.8 +/- 78.7bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CYWWGWRGGTTT
---TGTCGGTT-
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CYWWGWRGGTTT
GCACAYAGTAGGKCY
A C G T A C G T A C G T A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CYWWGWRGGTTT----
------TGGTTTCAGT
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CYWWGWRGGTTT-
-----NGGGATTA
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CYWWGWRGGTTT
-NNTGTGGTTT-
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CYWWGWRGGTTT--
NNNNATGCGGGTNNNN
A C G T A C G T A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CYWWGWRGGTTT
-TATGCGGGTA-
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CYWWGWRGGTTT-------
--NNNTTGGTTTCGNTNNN
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CYWWGWRGGTTT------
-TTAGAGGGATTAACAAT
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CYWWGWRGGTTT--------
-----NTGGTTTCGGTTNNN
A G T C A G C T C G A T C G A T A C T G C G A T C T A G A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T