Information for 8-AGCCAGAG (Motif 35)

C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G
Reverse Opposite:
G T A C A C G T A G T C A C G T T C A G T C A G A T G C A G C T
p-value:1e-3
log p-value:-8.944e+00
Information Content per bp:1.802
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif7.26%
Number of Background Sequences with motif2287.6
Percentage of Background Sequences with motif4.79%
Average Position of motif in Targets99.2 +/- 54.1bp
Average Position of motif in Background102.1 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGAG-
ATGCCAGACN
A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGAG--
AAACCACAGAN
A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGAG-
GAGSCCGAGC
A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G A C G T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGAG
CGTGCCAAG-
A C G T A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGAG-
AAACCACANN
A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G A C G T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAGAG
BCAGACWA--
A C G T A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGAG-
AAACCACAGC
A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGAG
CAGCC----
A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGAG
NAAACCACAG
A C G T A C G T C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCCAGAG----
RHHCAGAGAGGB
C T G A T A C G A G T C A G T C C G T A T A C G C G T A C A T G A C G T A C G T A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G