Information for 5-CTATCTGTCA (Motif 13)

A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A
Reverse Opposite:
C G A T A C T G C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G
p-value:1e-4
log p-value:-9.284e+00
Information Content per bp:1.963
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif114.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets82.2 +/- 40.4bp
Average Position of motif in Background90.2 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CTATCTGTCA
NNNCCATCTGTNN
A C G T A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CTATCTGTCA----
AACTAGCTGTCAATAC
A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CTATCTGTCA----
AACGAGCTGTCAATAC
A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTATCTGTCA-
NNCCATCTGTNNN
A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTATCTGTCA----
AATTACCTGTCAATAC
A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:CTATCTGTCA-
----NTGTCAN
A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTATCTGTCA----
AAAGACCTGTCAATAC
A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTATCTGTCA----
AAAGACCTGTCAATCC
A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTATCTGTCA-
---GCTGTCAA
A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTATCTGTCA-----
NNNCAGCTGTCAATATN
A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C