Information for 20-GACCCTGCCG (Motif 41)

A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C
p-value:1e-3
log p-value:-6.974e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background82.2 +/- 61.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GACCCTGCCG--
-NNCCTGCTGNG
A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T
A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GACCCTGCCG
AAGACCCYYN--
A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACCCTGCCG
NTGACCTCN---
A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G
C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACCCTGCCG--
CCCCCTGCTGTG
A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic2/MA1629.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACCCTGCCG----
CCCCCTGCTGTGNN
A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

NR5A1/MA1540.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACCCTGCCG
NTGACCTTGAN-
A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACCCTGCCG---
GGCCYCCTGCTGDGH
A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GACCCTGCCG-
NNNNTGACCCGGCGCG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GACCCTGCCG-
NNNNATGACCTTGANTN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACCCTGCCG
NTGACCTN----
A C G T A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C T G
C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C A C G T A C G T A C G T A C G T