| p-value: | 1e-4 |
| log p-value: | -1.031e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 110.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CGGTCAGGGATA AGGTCAAGGTCA |
|
|
|
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CGGTCAGGGATA AGGTCAAGGTCA |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CGGTCAGGGATA AGGTCA------ |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGGTCAGGGATA CGAGGTCAC----- |
|
|
|
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 5 |
| Score: | 0.56 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | CGGTCAGGGATA---- -----AAGGATATNTN |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGGTCAGGGATA AGRGGTCA------ |
|
|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CGGTCAGGGATA NRBCARRGGTCA------ |
|
|
|
PAX5/MA0014.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CGGTCAGGGATA NNGGTCACGCTC- |
|
|
|
PB0157.1_Rara_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CGGTCAGGGATA AGAGCGGGGTCAAGTA-- |
|
|
|
Hand1::Tcf3/MA0092.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.54 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CGGTCAGGGATA -GGTCTGGCAT- |
|
|
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