Information for 23-AAAGCAAGTTAG (Motif 31)

C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.135e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background141.2 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGCAAGTTAG
AAGGCAAGTGT-
C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCAAGTTAG----
CAAAGCTAATTAGNTTN
A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0155.1_Prrx2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAGCAAGTTAG-----
AAAGCTAATTAGCGAAA
C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGCAAGTTAG--
AAAAACCAATTAAGAA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGCAAGTTAG----
GAAAACTAGTTAACATC
A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0098.1_Lhx8/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCAAGTTAG----
CACCGCTAATTAGNNGN
A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

GRHL2/MA1105.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAGCAAGTTAG
AAAACAGGTTTT
C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

EHF/MA0598.3/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAAGCAAGTTAG
NNAACAGGAAGTGNN
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G
T C A G C T G A C G T A T G C A T A G C T G C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C G A T A C G

SPI1/MA0080.5/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAAGCAAGTTAG---
AAAAAAGAGGAAGTGAAAAA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
C T G A C T G A C T G A C T G A C T G A C G T A T C A G C T G A C T A G C T A G T C G A C G T A T C A G C G A T T A C G T C G A C T G A C T G A C T G A C G T A

GABPA/MA0062.3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCAAGTTAG
NNACAGGAAGTGNN
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T C G T A A C T G
C T G A T C G A T C G A T A G C G T C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C A G T C A G