Information for 1-CATAGAGAGT (Motif 1)

A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A G C T A G T C A C G T C G T A A C G T A T C G
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.949
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif112.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets151.7 +/- 53.5bp
Average Position of motif in Background108.6 +/- 86.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATAGAGAGT---
TTGACCGAGAATTCC
A C G T A C G T A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATAGAGAGT---
NNNACCGAGAGTNNN
A C G T A C G T A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATAGAGAGT-
RHHCAGAGAGGB
A C G T A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

MSANTD3/MA1523.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CATAGAGAGT----
----GTGAGTGNAC
A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATAGAGAGT---
GNNACCGAGAATNNN
A C G T A C G T A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PRDM1/MA0508.3/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CATAGAGAGT-
NAGAGAAAGNA
A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CATAGAGAGT--
--TTGAGTGSTT
A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATAGAGAGT
GAAAGTGAAAGT
A C G T A C G T A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATAGAGAGT-
-BTBRAGTGSN
A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CATAGAGAGT----
AAACATAATGAGGTTGC
A C G T A C G T A C G T A T G C C G T A A C G T C G T A A C T G C T G A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C