| p-value: | 1e-13 |
| log p-value: | -3.056e+01 |
| Information Content per bp: | 1.972 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.67% |
| Number of Background Sequences with motif | 3.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 102.0 +/- 42.9bp |
| Average Position of motif in Background | 117.5 +/- 15.7bp |
| Strand Bias (log2 ratio + to - strand density) | 2.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTAATGAAATAG GGYAATGAAA--- |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTAATGAAATAG NCYAATAAAA--- |
|
|
|
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTAATGAAATAG GGCMATGAAA--- |
|
|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTAATGAAATAG HDGYAATGAAAN-- |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTAATGAAATAG CYHATAAAAN-- |
|
|
|
HOXB4/MA1499.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTAATGAAATAG NTAATGAT---- |
|
|
|
PH0147.1_Pou3f2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CTAATGAAATAG- NNNACTAATTAATTANC |
|
|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTAATGAAATAG NTAATGAN---- |
|
|
|
PH0038.1_Hlx/Jaspar
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTAATGAAATAG-- TGTAATTAATTATGG |
|
|
|
ARGFX/MA1463.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTAATGAAATAG TCTAATTAAA--- |
|
|
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