Information for 3-TCAGCACGGGTG (Motif 6)

A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G C G T A
p-value:1e-8
log p-value:-1.851e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.2 +/- 40.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TCAGCACGGGTG
TGAGTCAGCA------
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCAGCACGGGTG
CACAGCAGGGGG-
A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCAGCACGGGTG
CACAGCAGGGG--
A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCAGCACGGGTG--
----CACGTGTGCH
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCACGGGTG
DCTCAGCAGG----
A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCAGCACGGGTG
---GCACGTGT-
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCAGCACGGGTG
CTCACAGCAGGGGG-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G A C G T

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCAGCACGGGTG
--GGCACGTGTC
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G
A C G T A C G T C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

SNAI2/MA0745.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCAGCACGGGTG---
--NNGACAGGTGCNN
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCAGCACGGGTG---
---NNACAGGTGTNN
A C G T A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T