Information for 8-MWGSGCAAAGBD (Motif 10)

T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T
Reverse Opposite:
G C A T T G A C A G T C C G A T A C G T C G A T C T A G G A T C A T G C G T A C C G A T A C G T
p-value:1e-3
log p-value:-8.810e+00
Information Content per bp:1.581
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif46.15%
Number of Background Sequences with motif4402.1
Percentage of Background Sequences with motif7.16%
Average Position of motif in Targets113.8 +/- 55.3bp
Average Position of motif in Background101.7 +/- 75.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-MWGSGCAAAGBD--
VNAGGKCAAAGGTCA
A C G T T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:MWGSGCAAAGBD--
TAGGGCAAAGGTCA
T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-MWGSGCAAAGBD--
GTAGGGCAAAGGTCA
A C G T T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--MWGSGCAAAGBD--
CANAGNNCAAAGTCCA
A C G T A C G T T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

TCF7L1/MA1421.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-MWGSGCAAAGBD
AAAGATCAAAGG-
A C G T T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T
G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:MWGSGCAAAGBD--
TGGGGCAAAGGTCA
T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MWGSGCAAAGBD---
GAGGTCAAAGGTCAC
T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C

LEF1/MA0768.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-MWGSGCAAAGBD--
AAAGATCAAAGGGTT
A C G T T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Nr2f6/MA0677.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MWGSGCAAAGBD--
GAGGTCAAAGGTCA
T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MWGSGCAAAGBD--
GAGGTCAAAGGTCA
T G C A G C T A C A T G A T C G C A T G G A T C C G T A T G C A C G T A T C A G A C T G C G A T A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A