Information for 14-GAAATTCACAGG (Motif 16)

A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.953e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background153.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAATTCACAGG
GGAAATTCCC---
A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAAATTCACAGG
TCCAATCCACA--
A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAAATTCACAGG
SSAATCCACANN
A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAAATTCACAGG
--ACWTCAAAGG
A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GAAATTCACAGG-----
-NNATTGACAGGTGCTT
A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAAATTCACAGG
GGAAATTCCC---
A C G T A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAAATTCACAGG
--ACATCAAAGG
A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:GAAATTCACAGG
------CACAGN
A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAATTCACAGG
--HTTTCCCASG
A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAAATTCACAGG
----TTGACAGC
A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C