Information for 7-CAGCCCGGGG (Motif 22)

A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C T G A C T G A C T G A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.090e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCCGGGG---
NCCCCCCCGGGGGGN
A C G T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCCGGGG---
ACCCCCCCGGGGGGN
A C G T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

TFAP2E/MA1569.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGCCCGGGG--
-NGCCTGAGGCN
A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
A C G T G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCCGGGG--
CACAGCGGGGGGTC
A C G T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGCCCGGGG----
ATTGCCTGAGGCAAT
A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCCGGGG---
CCCCCCCGGGGGNN
A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCCGGGG--
NCGCAGCGGGGGGTC
A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGCCCGGGG----
CAGGCCNNGGCCNN
A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZIC5/MA1584.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CAGCCCGGGG---
GCNCAGCGGGGGGTCN
A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
C A T G T G A C C T G A A G T C T C G A T C A G G A T C C T A G A C T G C A T G A C T G A C T G C A T G A G C T T G A C A C T G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGCCCGGGG---
-TGCCCNGGGGCA
A G T C C G T A A C T G A G T C A G T C A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A