Information for 23-GCCACCAAGGAC (Motif 28)

A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.550e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GCCACCAAGGAC---
-----CAAGGHCANV
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCACCAAGGAC--
---GTCAAGGTCAC
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCACCAAGGAC-
---NTCAAGGTCA
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCCACCAAGGAC-
---BTCAAGGTCA
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCAAGGAC
AGACCACCCASR--
A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G A C G T A C G T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCAAGGAC-
NGGCCTCCCAGGGAG
A C G T A C G T A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCCACCAAGGAC--
----TCAAGGTCAN
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCACCAAGGAC------
-TATTCAAGGTCATGCGA
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCCACCAAGGAC--
----CAAAGGTCAG
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCACCAAGGAC--
--NBYCAAGGTCAC
A C T G A G T C A G T C C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C