| p-value: | 1e-2 |
| log p-value: | -5.454e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 3629.2 |
| Percentage of Background Sequences with motif | 3.94% |
| Average Position of motif in Targets | 50.2 +/- 7.3bp |
| Average Position of motif in Background | 102.1 +/- 80.2bp |
| Strand Bias (log2 ratio + to - strand density) | -0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.33 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------TAAAACTTTT AATGCAATAAAATTTAT |
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PH0078.1_Hoxd13/Jaspar
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------TAAAACTTTT CTACCAATAAAATTCT- |
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HLTF/MA0109.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TAAAACTTTT-- --AACCTTATAT |
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ZNF652/MA1657.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAAAACTTTT NTTAACTCTTTN |
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|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----TAAAACTTTT NGYCATAAAWCH--- |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TAAAACTTTT CYHATAAAAN---- |
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|
|
MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TAAAACTTTT-------- ---GACTTTTAWTTTGAA |
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|
Nr2e3/MA0164.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAAAACTTTT -CAAGCTT-- |
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|
HOXA13/MA0650.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----TAAAACTTTT CCCAATAAAAC---- |
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|
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----TAAAACTTTT NCYAATAAAA----- |
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