Information for 2-GGCTTTAG (Motif 23)

A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.301e+01
Information Content per bp:1.530
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif193.9
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets101.1 +/- 66.2bp
Average Position of motif in Background102.2 +/- 57.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB6/MA1581.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTTAG---
NNGGCTCAAGGNN
A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCTTTAG----
GGCTCYAKCAYC
A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTAG
NGGGATTA-
A C G T A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCTTTAG----
BCNGGTTCTAGANCN
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTTTAG
NGCTN---
A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTTTAG----
DGWTTTATGRCN
A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTAG
NGGATTAN-
A C G T A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGCTTTAG--
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Isl1/MA1608.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCTTTAG--
ATCCATTAGCA
A C G T A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTTAG
GGGATTANN
A C G T A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G