Information for 25-CTCTGAATAG (Motif 40)

A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C T G
p-value:1e-2
log p-value:-5.749e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets90.9 +/- 49.3bp
Average Position of motif in Background99.6 +/- 51.2bp
Strand Bias (log2 ratio + to - strand density)-3.6
Multiplicity (# of sites on avg that occur together)3.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTCTGAATAG
CCAAAAATAG
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCTGAATAG-
GCTATAAATAGC
A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTCTGAATAG-
ACTATAAATAGA
A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAATAG-
KCCAAAAATAGC
A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGAATAG
VCCTCTCTGDDY--
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGAATAG-
GCTAAAAATAGC
A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCTGAATAG-
DCYAAAAATAGM
A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2A/MA0052.4/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCTGAATAG---
TTCTAAAAATAGAAA
A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGAATAG----
NTTNTATGAATGTGNNC
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTCTGAATAG--
--ATGMATATDC
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C G T
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C