Information for 12-AGGCGTTTGT (Motif 24)

C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A C G T A A G T C A C T G A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.683e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets174.0 +/- 0.0bp
Average Position of motif in Background167.0 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AGGCGTTTGT---
---CCTTTGTTTT
C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGCGTTTGT-
---CCWTTGTY
C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGGCGTTTGT----
--BCCWTTGTBYKV
C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGGCGTTTGT------
TNNTCCTTTGTTCTNNT
A C G T C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGCGTTTGT---
---CCATTGTTNY
C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGTTTGT--
NNNTNGGGCGTATNNTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGGCGTTTGT--
--NCCTTTGTTC
C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGCGTTTGT
-GGCVGTTR-
C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGGCGTTTGT---
--NNCTTTGTTNN
C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGCGTTTGT
AGGVNCCTTTGT
A C G T A C G T C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T