Information for 1-TCTTCTAGACAG (Motif 1)

A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A T G C A C G T C G T A A C T G G T C A C G T A A C T G C G T A
p-value:1e-14
log p-value:-3.452e+01
Information Content per bp:1.958
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets117.3 +/- 59.2bp
Average Position of motif in Background102.5 +/- 49.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:TCTTCTAGACAG
---TCTAGACA-
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTTCTAGACAG
-CGTCTAGACA-
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TCTTCTAGACAG
-TGTCTAGACA-
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G
A C G T G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTTCTAGACAG-
-CGTCTACACGGG
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G A C G T
A C G T A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCTTCTAGACAG
----CCAGACAG
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCTTCTAGACAG----
CAAATCCAGACATCACA
A C G T A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TCTTCTAGACAG-
CTAAGGTTCTAGATCAC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCTTCTAGACAG--
----CCAGACRSVB
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCTTCTAGACAG-
-----TTGACAGC
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTTCTAGACAG
----BCAGACWA
A C G T A G T C A C G T A C G T A G T C A C G T C G T A A T C G C G T A A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A