| p-value: | 1e-3 |
| log p-value: | -6.990e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.25% |
| Number of Background Sequences with motif | 3.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 100.0 +/- 0.0bp |
| Average Position of motif in Background | 53.7 +/- 10.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0040.1_Hmbox1/Jaspar
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGACTAGTTG----- GAAAACTAGTTAACATC |
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HMBOX1/MA0895.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGACTAGTTG-- --ACTAGTTAAC |
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OTX2/MA0712.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGACTAGTTG AAGGGATTAGAA- |
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PITX1/MA0682.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGACTAGTTG NGGATTAN--- |
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PH0129.1_Otx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----GGACTAGTTG-- AGAGGGGATTAATTTAT |
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PH0138.1_Pitx2/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----GGACTAGTTG-- TGAAGGGATTAATCATC |
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PH0130.1_Otx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----GGACTAGTTG-- TGTAGGGATTAATTGTC |
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LHX2/MA0700.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGACTAGTTG--- --NNTAATTGGNN |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGACTAGTTG GGATTAGC-- |
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Dmbx1/MA0883.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------GGACTAGTTG- TGAACCGGATTAATGAA |
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