Information for 20-GAGTTTCCCG (Motif 34)

A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C T G C G T A C G T A C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.284e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets190.0 +/- 0.0bp
Average Position of motif in Background55.8 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GAGTTTCCCG
GGGAATTTCC--
A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAGTTTCCCG---
-VDTTTCCCGCCA
A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C G T A C G T
A C G T T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

TFDP1/MA1122.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GAGTTTCCCG---
--NNTTCCCGCCN
A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A T G C A T G C A C G T G A C T T A G C A T G C A T G C C T A G A T G C A T G C A T G C

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GAGTTTCCCG--
--DTTTCCCGCC
A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C G T
A C G T A C G T C T G A G C A T G A C T C A G T A T G C A T G C A T G C A C T G A T G C A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GAGTTTCCCG--
--NYTTCCCGCC
A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C G T
A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTTCCCG
GGGAATTTCC--
A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GAGTTTCCCG----
----TTCCCGCCWG
A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGTTTCCCG
GGGGATTTCC--
A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GAGTTTCCCG-----
---TTTCCCGCCMAV
A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAGTTTCCCG
NGGGGATTTCCC-
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A G T C A G T C A G T C A C T G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T