Information for 24-GTGTGTTTTGAA (Motif 28)

A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A C G T A C G T A C G T A A G T C C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.327e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets156.0 +/- 0.0bp
Average Position of motif in Background177.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GTGTGTTTTGAA--
-----ATTTGAATT
A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTTTTGAA---
NNCTTTGTTTTGNTNNN
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:GTGTGTTTTGAA----
------TTTGAAACCG
A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTTTTGAA--
NNTTTTGTTTTGATNT
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTGTGTTTTGAA
-TGTGGATTNNN
A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGTGTTTTGAA
CTGTGGTTTN--
A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTTTTGAA
NNTGTGGTTT---
A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

ZNF384/MA1125.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGTGTTTTGAA-
-TTTTTTTTTANN
A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T
A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGTGTTTTGAA
GTCTGTGGTTT---
A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTTTTGAA
GCTGTGGTTT---
A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C T G C G T A C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T