Information for 23-AGTTGGGTRC (Motif 34)

C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A G T C A G T C G T A C C G T A C T G A A G T C A C G T
p-value:1e-2
log p-value:-5.222e+00
Information Content per bp:1.897
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets120.0 +/- 29.1bp
Average Position of motif in Background114.1 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTTGGGTRC
NNCAGTTGNN---
A C G T A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGGGTRC----
NNNNTTGTGTGCTTNN
A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0150.1_Mybl1_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGTTGGGTRC
CACGGCAGTTGGTNN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

POL007.1_BREd/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGTTGGGTRC
-GTTTGTT--
C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C
A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------AGTTGGGTRC
NNNTGGCAGTTGGTNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGGGTRC----
NNNNTTGGGCACNNCN
A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGTTGGGTRC-----
GCTGGGGGGTACCCCTT
A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AGTTGGGTRC
TGGCAGTTGG----
A C G T A C G T A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGTTGGGTRC-
NNTTGAGTGNN
C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

SOX12/MA1561.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGTTGGGTRC
NATTGTTCGGT--
A C G T A C G T A C G T C G T A A C T G G A C T A C G T A C T G A C T G A C T G A C G T C T G A A G T C
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T A C G T A C G T