| p-value: | 1e-3 |
| log p-value: | -8.552e+00 |
| Information Content per bp: | 1.962 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.5 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 177.0 +/- 0.0bp |
| Average Position of motif in Background | 153.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORC/MA1151.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AATCACCTACAT-- --TGACCTANTTAN |
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RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATCACCTACAT--- -TTGACCTANTTATN |
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RORB/MA1150.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATCACCTACAT -NTGACCTAATT |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AATCACCTACAT --TGACCTARTT |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AATCACCTACAT --TGACCTARTT |
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|
|
NR1H4/MA1110.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AATCACCTACAT TCAATGACCTA--- |
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RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATCACCTACAT- NNHYTGACCTAGWTT |
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RORA/MA0071.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AATCACCTACAT --TGACCTTGAT |
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RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATCACCTACAT- -BTGACCTAVTTW |
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ZKSCAN5/MA1652.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATCACCTACAT- NNCTCACCTCCTNN |
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