| p-value: | 1e-7 |
| log p-value: | -1.687e+01 |
| Information Content per bp: | 1.728 |
| Number of Target Sequences with motif | 22.0 |
| Percentage of Target Sequences with motif | 2.41% |
| Number of Background Sequences with motif | 279.7 |
| Percentage of Background Sequences with motif | 0.59% |
| Average Position of motif in Targets | 105.5 +/- 47.3bp |
| Average Position of motif in Background | 103.2 +/- 53.2bp |
| Strand Bias (log2 ratio + to - strand density) | 0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.64 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0121.1_Obox1/Jaspar
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TAAACCCCTAAA NTAGTTAATCCCCTTAN |
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PH0015.1_Crx/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TAAACCCCTAAA AGGCTAATCCCCAANG |
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Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TAAACCCCTAAA TAATCCCN---- |
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Crx/MA0467.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAAACCCCTAAA CTAATCCTCTT-- |
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PB0201.1_Zfp281_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAAACCCCTAAA--- AGGAGACCCCCAATTTG |
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|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TAAACCCCTAAA- ---VGCCATAAAA |
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|
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PH0122.1_Obox2/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TAAACCCCTAAA ATAGTTAATCCCCCTCA |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TAAACCCCTAAA--- ---NGYCATAAAWCH |
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PH0047.1_Hoxa11/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TAAACCCCTAAA---- TAAAGTCGTAAAACAT |
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PB0136.1_IRC900814_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAAACCCCTAAA- ATGGAAAGTCGTAAAA |
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