Information for 10-CAATTCATGCTT (Motif 11)

A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C T G
p-value:1e-3
log p-value:-9.148e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAATTCATGCTT
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAATTCATGCTT
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PAX6/MA0069.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAATTCATGCTT---
-AANTCATGCGTGAA
A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAATTCATGCTT--
ACATTCATGACACG
A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Hmx2/MA0897.1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAATTCATGCTT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAATTCATGCTT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------CAATTCATGCTT
TNCNNAACAATTTTTNC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C A C G T A C G T

ELF1/MA0473.3/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAATTCATGCTT
NNCACTTCCTGNNN
A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A T G C A G T C A G T C G C T A A G T C G C A T A C G T G A T C T A G C A C G T A T C G A C G T G A C T G A C T

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAATTCATGCTT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CAATTCATGCTT
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T