| p-value: | 1e-4 |
| log p-value: | -9.380e+00 |
| Information Content per bp: | 1.865 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 0.32% |
| Number of Background Sequences with motif | 0.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 90.0 +/- 24.0bp |
| Average Position of motif in Background | 103.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----VCAGCATTGGTG CCACACAGCAGGAGA- |
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PB0205.1_Zic1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----VCAGCATTGGTG CCACACAGCAGGAGA- |
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|
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----VCAGCATTGGTG GAGCACAGCAGGACA- |
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|
|
Zic1::Zic2/MA1628.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -VCAGCATTGGTG CACAGCAGGGG-- |
|
|
|
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
| Match Rank: | 5 |
| Score: | 0.55 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --VCAGCATTGGTG DCTCAGCAGG---- |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -VCAGCATTGGTG CACAGN------- |
|
|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -VCAGCATTGGTG CACAGCAGGGGG- |
|
|
|
GLI2/MA0734.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | VCAGCATTGGTG---- -CGNCGTGGGTGGTCN |
|
|
|
Zic2/MA1629.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---VCAGCATTGGTG CTCACAGCAGGGGG- |
|
|
|
GLI3/MA1491.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.54 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | VCAGCATTGGTG---- -CGNCGTGGGTGGTCN |
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