Information for 2-NAAGCAAA (Motif 32)

C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A
Reverse Opposite:
G C A T A G C T C A G T C A T G G A T C G C A T A G C T G C T A
p-value:1e-3
log p-value:-7.375e+00
Information Content per bp:1.409
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif8892.2
Percentage of Background Sequences with motif9.27%
Average Position of motif in Targets71.3 +/- 52.6bp
Average Position of motif in Background98.5 +/- 86.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:NAAGCAAA--
WAAGTAAAYA
C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T A C G T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:NAAGCAAA--
AAAGTAAACA
C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T A C G T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----NAAGCAAA-
TACTGGAAAAAAAA
A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-NAAGCAAA
GTAAACAAT
A C G T C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:NAAGCAAA--
AAAGTAAACA
C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T A C G T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------NAAGCAAA---
AAAAAGTAAACAAACAC
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------NAAGCAAA---
AAAAAGTAAACAAACAC
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

ZNF384/MA1125.1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---NAAGCAAA-
TTTAAAAAAAAA
A C G T A C G T A C G T C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A

FOXN3/MA1489.1/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-NAAGCAAA
GTAAACAA-
A C G T C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A
A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-NAAGCAAA--
ATATGCAAATT
A C G T C G A T T C G A C G T A C T A G G T A C G T C A T C G A C G T A A C G T A C G T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T