Information for 6-TGGACCTGCA (Motif 29)

A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C T G A C T G A C G T A G T C A G T C C G T A
p-value:1e-3
log p-value:-7.209e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background75.2 +/- 117.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4/MA0830.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGACCTGCA--
CGGCACCTGCCCC
A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C G T A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGACCTGCA-
SNGCACCTGCHS
A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SNAI3/MA1559.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGACCTGCA
TGCACCTGTT
A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A
A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGGACCTGCA
TRCACCTGCY
A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A
A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGACCTGCA--
CAGCACCTGCCCC
A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C G T A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

SNAI1/MA1558.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGGACCTGCA
NGCACCTGCN
A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A
G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C

TCF3/MA0522.3/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGACCTGCA-
CGCACCTGCCC
A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGACCTGCA-
CGCACCTGCCG
A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TGGACCTGCA--
-GTACCCGCATN
A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C G T A C G T
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGACCTGCA
TGGAACAGMA
A C G T A C T G A C T G C G T A A G T C A G T C A C G T A C T G A G T C C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A