Information for 1-CTATGTAT (Motif 33)

A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C C G T A C G A T C G T A C T A G
p-value:1e-3
log p-value:-7.193e+00
Information Content per bp:1.904
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif4019.1
Percentage of Background Sequences with motif4.60%
Average Position of motif in Targets92.0 +/- 55.6bp
Average Position of motif in Background99.1 +/- 83.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTATGTAT----
-AATGTATCAAT
A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CTATGTAT-
GNTACTTTGTATC
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTATGTAT------
ATGGGATATATCCGCCT
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTATGTAT---
TCTATTTATAGN
A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

SOX10/MA0442.2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTAT-
NNCTTTGTTNN
A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

MEF2B/MA0660.1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTATGTAT---
GCTATTTATAGC
A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTATGTAT---
GCTATTTTTGGM
A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTATGTAT-----
NANTTATATATAANGN
A C G T A C G T A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTATGTAT--
CCATATATGG
A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTATGTAT---
GCTATTTTTAGC
A C G T A G T C A C G T C G T A A C G T C T A G A C G T C G T A A C G T A C G T A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C