Information for 2-CTGGGCCCGG (Motif 5)

A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A C T G A G T C A G T C A G T C C G T A A C T G
p-value:1e-4
log p-value:-9.307e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCCCGG
WDNCTGGGCA---
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

Plagl1/MA1615.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCCCGG--
NNTGGCCCCAGNN
A C G T A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C G T A C G T
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

KLF3/MA1516.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGGGCCCGG--
-NGGGCGTGGTC
A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C G T A C G T
A C G T C G A T C T A G A C T G A C T G G A T C C A T G A G C T C T A G A T C G A G C T G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGGGCCCGG
CTAGGCCT--
A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGGGCCCGG-
-TGGGCCCCCT
A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C G T
A C G T A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGGGCCCGG
GTGGGCCCCA
A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGGGCCCGG
CTGTTCCTGG
A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

KLF2/MA1515.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGGGCCCGG--
-NGGGCGTGGTN
A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C G T A C G T
A C G T C G A T T C A G A T C G T A C G A G T C C T A G A C G T C A T G A C T G A G C T A T C G

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGCCCGG
GGGGCCGAGGCCTG-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGGGCCCGG-
---GGCGCGCT
A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T