Information for 4-GCAGTGACGA (Motif 12)

A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G A T A G T C C G T A A G T C A C G T A C T G A G T C
p-value:1e-10
log p-value:-2.358e+01
Information Content per bp:1.969
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets149.0 +/- 28.1bp
Average Position of motif in Background97.5 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGACGA-
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCAGTGACGA
-NCGTGACN-
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCAGTGACGA-----
-GAATGACGAATAAC
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCAGTGACGA-
---ATGACGTA
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCAGTGACGA
----TGACGT
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGACGA
NNNNTGCCAGTGATTG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGTGACGA---
-NHRTCACGACDN
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T A C G T A C G T
A C G T T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

HOXA9/MA0594.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAGTGACGA-
-NNTTTACGAC
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T
A C G T A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

CREM/MA0609.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCAGTGACGA------
NNNGTGACGTCACNNN
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T G A C C T G A T C A G G A C T A T C G C T G A A G T C T C A G G A C T T A G C C T G A A G T C G A C T A C T G A T G C

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCAGTGACGA---
---ATGACGTAAC
A C T G A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A T C G G T C A A G T C C A T G G A C T T G C A C G T A G A T C