Information for 21-GGTCAGATTCTA (Motif 25)

A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A C G T A A C G T A G T C A C G T A C T G C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.053e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGATTCTA
AGGTCA-------
A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGATTCTA
CGAGGTCAC------
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGATTCTA
AGRGGTCA-------
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAGATTCTA
NRBCARRGGTCA-------
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCAGATTCTA
CYWSTGGTCARA-----
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T A C G T A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGATTCTA
GAGGTCAT------
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGATTCTA
TRAGGTCA-------
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAGATTCTA
GKBCARAGGTCA-------
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGTCAGATTCTA
CAAAGGTCAAA-----
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGTCAGATTCTA
ATCAAGGTCA-------
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C G T A G T C A C G T C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T