Information for 7-CTCTCCTCAT (Motif 16)

A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.970
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif36.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets115.5 +/- 59.9bp
Average Position of motif in Background101.8 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCCTCAT--
NNCTCACCTCCTNN
A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCTCCTCAT
ATCACCCCAC
A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTCTCCTCAT
ATCACCCCAT
A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

MAZ/MA1522.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTCTCCTCAT
CGCCCCTCCCC--
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T
A T G C A T C G A T G C T A G C T A G C T A G C C A G T T G A C T A G C A G T C A G T C A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCTCCTCAT---
---NNCTCATTAT
A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

ATF2/MA1632.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCCTCAT--
NATGACNTCATNN
A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTCCTCAT
-TGACCTYA-
A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCTCCTCAT--
AGATCACCTGATCT
A C G T A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
C T G A T C A G T C G A G C A T A T G C G C T A A T G C T A G C G C A T A T C G G C T A A G C T A G T C G A C T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTCCTCAT---
ATGACATCATCNN
A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCTCCTCAT----
NNCGCCTCAGGCNN
A G T C A C G T A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C