Information for 18-MYSTGGCMTACT (Motif 23)

G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C C G T A T A G C C T A G A C T G
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.865
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets75.6 +/- 50.9bp
Average Position of motif in Background97.5 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:MYSTGGCMTACT--
----CACCTACTAT
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-MYSTGGCMTACT--
NNHYTGACCTAGWTT
A C G T G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-MYSTGGCMTACT----
TCTTTGGCGTACCCTAA
A C G T G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:MYSTGGCMTACT--
--BTGACCTAVTTW
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:MYSTGGCMTACT-
---TGACCTARTT
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:MYSTGGCMTACT-
---TGACCTARTT
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

NR1D1/MA1531.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:MYSTGGCMTACT-----
--NTGACCTACTGACCC
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

RORC/MA1151.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:MYSTGGCMTACT---
---TGACCTANTTAN
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:MYSTGGCMTACT----
--TTGACCTANTTATN
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:MYSTGGCMTACT------
---RGMCCTACTRTGTGC
G T A C G A T C A T C G A C G T A C T G A C T G A G T C G T A C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C