Information for 24-AGGATGCATGGA (Motif 25)

C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-9.946e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets111.0 +/- 0.0bp
Average Position of motif in Background162.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGATGCATGGA
ATGATKGATGRC
C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGGATGCATGGA
-TGATKGATGR-
C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A
A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGATGCATGGA--
-GAATGAATGAATG
C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T
A C G T C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGATGCATGGA----
ACTATGAATGAATGAT
C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGGATGCATGGA---
GGAAGGAAGGAAGGAAGG
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGGATGCATGGA
ANCAGGATGT-----
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGGATGCATGGA
ACAGGAAGTG----
A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T A C G T A C G T

KLF17/MA1514.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGGATGCATGGA-
AAGGGGTGCGTGGTG
A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A A C G T
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGGATGCATGGA
CTACTAGGATGTNNTN-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGGATGCATGGA
NDCAGGAARTNN---
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C T G C G T A
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T A C G T