Information for 8-GACACGCTTC (Motif 29)

A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A G T C A C T G A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.171e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background156.1 +/- 63.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GACACGCTTC
NNGGTCACGCTC-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GACACGCTTC--
GTGCCACGCGACTG
A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GACACGCTTC
--CACGCA--
A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GACACGCTTC-
-----GCTTCC
A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GACACGCTTC--
NNGGCCACGCCTTTN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GACACGCTTC
--CAAGCTT-
A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACACGCTTC------
CGTCACGCATGACTGCA
A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

PAX9/MA0781.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACACGCTTC------
CGTCACGCATGACTGCA
A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

HES1/MA1099.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACACGCTTC
GNCACGTGCC
A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C
T A C G T A G C G T A C C T G A A G T C C T A G G A C T C A T G G T A C T G A C

HEY2/MA0649.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GACACGCTTC
GGCACGTGNC
A C T G C G T A A G T C C G T A A G T C A C T G A G T C A C G T A C G T A G T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C