Information for 6-GAGGCAATTATA (Motif 6)

A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C T G A G T C A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.747e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets133.0 +/- 32.4bp
Average Position of motif in Background194.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DLX5/MA1476.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GAGGCAATTATA
---GCAATTAC-
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C A C G T

LHX2/MA0700.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGGCAATTATA
-AACCAATTAAT
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

PH0021.1_Dlx2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GAGGCAATTATA--
CTGANNTAATTATNNN
A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T
T A G C G A C T C A T G C T G A C T A G T A C G G A C T C G T A C G T A C G A T A C G T C T G A G A C T G A C T A G T C A G T C

Dlx2/MA0885.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAGGCAATTATA
---GCAATTAA-
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCAATTATA----
NNNGGTAATTATNGNGN
A C G T A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

Nobox/MA0125.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GAGGCAATTATA
--ACCAATTA--
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:7
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAGGCAATTATA
---CCAATTAC-
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAGGCAATTATA
---CCAATTAA-
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAGGCAATTATA
---GCAATTAC-
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAGGCAATTATA
---CCAATTAC-
A C T G C G T A A C T G A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A
A C G T A C G T A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T