Information for 21-GCCTCCAAATAG (Motif 24)

A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GCCTCCAAATAG
--CCAAAAATAG
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G
A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCTCCAAATAG-
-KCCAAAAATAGC
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C G T A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTCCAAATAG-
-ACTATAAATAGA
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTCCAAATAG-
-DCYAAAAATAGM
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTCCAAATAG-
-GCTATAAATAGC
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2A/MA0052.4/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCTCCAAATAG---
TTCTAAAAATAGAAA
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCTCCAAATAG--
ATGCTAAAAATAGAA
A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCTCCAAATAG-
-GCTAAAAATAGC
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCCTCCAAATAG
AAGCCCCCCAAAAAT
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

LHX2/MA0700.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCTCCAAATAG-
--AACCAATTAAT
A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T C G T A A C T G A C G T
A C G T A C G T C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T