| p-value: | 1e-3 |
| log p-value: | -8.926e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 2.3 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 94.0 +/- 0.0bp |
| Average Position of motif in Background | 180.7 +/- 6.6bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NR1I3/MA1534.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.75 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AAAGTTCAAATC AAAGTTCAT--- |
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RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AAAGTTCAAATC CAAAGKTCAA--- |
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|
NR4A1/MA1112.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAAGTTCAAATC TTAAAGGTCAAA-- |
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TCF7L1/MA1421.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAGTTCAAATC AAAGATCAAAGG |
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|
LIN54/MA0619.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AAAGTTCAAATC --NATTCAAAT- |
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|
|
HNF4A/MA0114.4/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AAAGTTCAAATC TCCAAAGTCCAAA-- |
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|
|
PB0134.1_Hnf4a_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AAAGTTCAAATC GGCAAAAGTCCAATAA |
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|
|
HNF4G/MA0484.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AAAGTTCAAATC TCCAAAGTCCAGA-- |
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|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AAAGTTCAAATC CAAAGGTCAAA-- |
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|
|
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AAAGTTCAAATC ANGNAAAGGTCA---- |
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