Information for 22-AAAGAATTCAAG (Motif 28)

C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.078e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background88.8 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAAGAATTCAAG-
ATAAACAATTAAACA
A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGAATTCAAG----
AATCAATTCAATAATT
C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAAGAATTCAAG
--AAAAGTCAA-
C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

ZNF652/MA1657.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGAATTCAAG
GAAAGAGTTAAA-
A C G T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGAATTCAAG-
GAAAAAATTGCAAGG
A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGAATTCAAG
NNTNANAACAATTNNA-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGAATTCAAG--
GGACTGAATTCATGCC
A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0165.1_Sox11_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAAGAATTCAAG
NNCNNAACAATTNT--
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAAGAATTCAAG-----
---ACATTCATGACACG
C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

MF0010.1_Homeobox_class/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAGAATTCAAG
-AATAATT----
C G T A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T