Information for 10-AGTGTACCATGA (Motif 16)

C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A A G T C C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.928e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background159.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGTGTACCATGA
AATGTATCAAT-
C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTGTACCATGA
-CTGTTCCTGG-
C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGTGTACCATGA---
---GWAAYHTGABMC
C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

DMRTA2/MA1478.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGTGTACCATGA
AATGTAACAATT
C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A
T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

SIX1/MA1118.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGTGTACCATGA--
---GTAACCTGATA
C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

MSANTD3/MA1523.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTACCATGA
GTGAGTGNAC-----
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T A C G T A C G T A C G T

SIX2/MA1119.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTGTACCATGA---
AACTGAAACCTGATAC
A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGTGTACCATGA
TGGAATGTACCA---
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTGTACCATGA--
GATGGGGTATCATTTTT
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTGTACCATGA--
AATAGGGTATCAATATT
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C G T A C T G C G T A A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T