Information for 17-CACTGTGA (Motif 39)

A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.406e+00
Information Content per bp:1.928
Number of Target Sequences with motif283.0
Percentage of Target Sequences with motif3.94%
Number of Background Sequences with motif1377.8
Percentage of Background Sequences with motif3.24%
Average Position of motif in Targets101.6 +/- 54.4bp
Average Position of motif in Background102.9 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CACTGTGA----
CAATCACTGGCAGAAT
A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACTGTGA
CTCATTGTC-
A C G T A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTGA
NNCCATTGTNN
A C G T A C G T A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTGA
NNCCATTGTNN
A C G T A C G T A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

SOX18/MA1563.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACTGTGA
GCATTGTN-
A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A
A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CACTGTGA
-GCTGTG-
A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CACTGTGA---
NNTNNACAATGGGANNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTGA----
GGTCANNGTGACCTN
A C G T A C G T A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACTGTGA-
CCWTTGTYYB
A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CACTGTGA---
NNNCCATTGTGTNAN
A C G T A C G T A C G T A C G T A G T C C G T A G T A C A C G T A C T G A C G T A C T G G T C A A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G