Information for 21-GAAGTCAAAAGG (Motif 28)

A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.952e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background60.5 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAAGTCAAAAGG---
GAGGTCAAAAGGTCA
A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

RARA/MA0729.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GAAGTCAAAAGG------
GAGGTCAAAAGGTCAATG
A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAAGTCAAAAGG
AAAAGTCAA----
A C G T A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GAAGTCAAAAGG----
AAGGTCAAAAGGTCAA
A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAAGTCAAAAGG---
AAAGGTCAAAAGGTCA
A C G T A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAAGTCAAAAGG----
-GGGTCCAAAGGTCAC
A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAGTCAAAAGG-
ARGAGGMCAAAATGW
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAGTCAAAAGG
CGGAAGTGAAAC--
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAAGTCAAAAGG
GGAAGTGAAAST-
A C G T A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAGTCAAAAGG
CAAAGGTCAAGGG-
A C G T A C G T A C T G C G T A C G T A A C T G A C G T A G T C C G T A C G T A C G T A C G T A A C T G A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T