Information for 3-TTAAGTTCATAC (Motif 3)

A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTAAGTTCATAC
-AAAGTTCAT--
A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTAAGTTCATAC
-TGAGTTCA---
A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTAAGTTCATAC
TCAAGGTCATA-
A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTAAGTTCATAC
TCAAGGTCAT--
A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTAAGTTCATAC
CAAAGGTCAAA-
A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T

PH0112.1_Nkx2-3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTAAGTTCATAC--
CTTTAAGTACTTAATG
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTAAGTTCATAC
CAAAGKTCAA--
A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGTTCATAC--
NATTTAAGTACTTANNA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

ESRRA/MA0592.3/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTAAGTTCATAC
GCTCAAGGTCACA-
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGTTCATAC-
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G