Information for 1-GCYTARCKCG (Motif 1)

A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G T G C A A C T G A G C T A C G T C G T A C T A G A C T G A G T C
p-value:1e-14
log p-value:-3.358e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.1 +/- 55.6bp
Average Position of motif in Background68.7 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCYTARCKCG--
NNGCNCTGCGCGGC
A C G T A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCYTARCKCG
NNCTTATCTN-
A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCYTARCKCG
NCCTTATCTG-
A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCYTARCKCG
AGGCCTAG----
A C G T A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCYTARCKCG
GGATTAGC---
A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCYTARCKCG
YCTTATCTBN
A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCYTARCKCG
TGCCTGAGGCN
A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

ZNF682/MA1599.1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GCYTARCKCG
NNAGGGGCTTGGCCNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCYTARCKCG-------
--TTAACCCTTTVNKKN
A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

ZNF449/MA1656.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCYTARCKCG
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T C G T A C T G A A G T C A C G T A G T C A C T G
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G