Information for 12-ACTGGCAC (Motif 33)

C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C G T
p-value:1e-1
log p-value:-3.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif199.1
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets89.0 +/- 57.1bp
Average Position of motif in Background99.9 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)4.0
Multiplicity (# of sites on avg that occur together)2.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----ACTGGCAC---
CAATCACTGGCAGAAT
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-ACTGGCAC
VGCTGGCA-
A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACTGGCAC-
NTTGGCANN
C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ACTGGCAC
GGTTGGCAT
A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

ZBTB12/MA1649.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACTGGCAC--
ATCTGGAACCC
A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACTGGCAC-
NNTTGGCANN
A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACTGGCAC
CTTGGCAA
C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACTGGCAC--
TGTCTGDCACCT
A C G T A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACTGGCAC-
VGCTGWCAVB
A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACTGGCAC
NGTGGGCAT
A C G T C G T A A G T C A C G T A C T G A C T G A G T C C G T A A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T