Information for 5-MTWKYSWWTCAM (Motif 6)

G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C
Reverse Opposite:
A C T G C G A T A C T G C G T A C G A T C G A T A T C G T C A G G T A C C G A T C G T A A C T G
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.747
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif974.0
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets57.5 +/- 29.8bp
Average Position of motif in Background97.2 +/- 82.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:MTWKYSWWTCAM
----CCAATCAA
G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:MTWKYSWWTCAM
SCTGTCAVTCAV
G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PH0165.1_Six6_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-MTWKYSWWTCAM----
AATAGGGTATCAATTAT
A C G T G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Six3/MA0631.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-MTWKYSWWTCAM----
GATAGGGTATCACTAAT
A C G T G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-MTWKYSWWTCAM----
GATAGGGTATCACTAAT
A C G T G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

NFYC/MA1644.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:MTWKYSWWTCAM-
--AGCCAATCAGA
G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C A C G T
A C G T A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-MTWKYSWWTCAM---
NNCATTCATTCATNNN
A C G T G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:MTWKYSWWTCAM
NCTGTCAATCAN
G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:MTWKYSWWTCAM-----
CGACCCAATCAACGGTG
G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:MTWKYSWWTCAM-
--AACCAATCAGA
G T A C A C G T C G T A A C T G A G T C A T G C C G T A C G T A A C G T A G T C C G T A G T A C A C G T
A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A