Information for 14-AACCACTTTTTA (Motif 16)

C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C T G A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.425e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.3 +/- 24.6bp
Average Position of motif in Background69.6 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-2/MA0122.3/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AACCACTTTTTA
ATAACCACTTAAA-
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AACCACTTTTTA
-ACCACTTAA--
C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AACCACTTTTTA
NAAACCGGTTTT--
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AACCACTTTTTA--
CATAACCACTTAACAAC
A C G T A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACCACTTTTTA--
TAAGCCACTTAACATT
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACCACTTTTTA
MRSCACTYAA--
C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACCACTTTTTA
-ACCACTTGAA-
C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A
A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACCACTTTTTA
NAAACCTGTTTN--
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A
G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACCACTTTTTA---
ATAACCACTTGAAAATT
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACCACTTTTTA--
CTTAACCACTTAAGGAT
A C G T A C G T A C G T C G T A C G T A A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T