| p-value: | 1e-7 |
| log p-value: | -1.656e+01 |
| Information Content per bp: | 1.783 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 1.32% |
| Number of Background Sequences with motif | 60.6 |
| Percentage of Background Sequences with motif | 0.13% |
| Average Position of motif in Targets | 103.9 +/- 52.1bp |
| Average Position of motif in Background | 97.6 +/- 58.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.60 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA---- AGAGCCATAAAATTCG |
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Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA --VGCCATAAAA |
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HOXD12/MA0873.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA- --AGTCGTAAAAA |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ARAACCCTAAAA --KGCCATAAAA |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA-- --NGYCATAAAWCH |
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|
|
RUNX3/MA0684.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA- -AAAACCTCAAAT |
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|
|
PH0056.1_Hoxa9/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA----- ACGGCCATAAAATTAAT |
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|
|
PH0047.1_Hoxa11/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ARAACCCTAAAA--- TAAAGTCGTAAAACAT |
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|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA- ---GTCATAAAAN |
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|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ARAACCCTAAAA----- AATGCAATAAAATTTAT |
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