Information for 11-CCGACTGGAG (Motif 23)

A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C C G T A A C T G A C G T A G T C A C T G A C T G
p-value:1e-3
log p-value:-8.137e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background133.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGACTGGAG
CTGTCTGG--
A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGACTGGAG
VBSYGTCTGG--
A C G T A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGACTGGAG
ACCAACTGTC-
A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCGACTGGAG--
CGACCAACTGCCGTG
A C G T A C G T A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGACTGGAG---
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

ZBTB26/MA1579.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGACTGGAG--
NNNNTTTCTGGAGNN
A C G T A C G T A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C G T A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGACTGGAG
-TGTCTAGA-
A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCGACTGGAG
CACCTACTAT--
A C G T A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCGACTGGAG
CCGATTGGCT
A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCGACTGGAG
NCTGATTGGNN
A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T