Information for 3-NCTKTNGCTGGG (Motif 3)

A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A T A C G A G T C A G T C C G T A G T A C C T G A A C T G A C T G
p-value:1e-5
log p-value:-1.251e+01
Information Content per bp:1.715
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif902.5
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets123.2 +/- 28.9bp
Average Position of motif in Background98.2 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:NCTKTNGCTGGG--
----WDNCTGGGCA
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF449/MA1656.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:NCTKTNGCTGGG-----
---NNGGTTGGGCTTNN
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

KLF4/MA0039.4/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:NCTKTNGCTGGG---
---NNGGGTGGGGNN
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G C A T G C T A G A T C G T A C G G A C T C A T G C A T G C T A G C T A G T A G C A T C G

RBPJ/MA1116.1/Jaspar

Match Rank:4
Score:0.63
Offset:6
Orientation:forward strand
Alignment:NCTKTNGCTGGG----
------CCTGGGAAAG
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:NCTKTNGCTGGG-----
GTATTGGGTGGGTAATT
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:NCTKTNGCTGGG-
-CTGTTGCTAGGS
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--NCTKTNGCTGGG-
GGGGCTYGKCTGGGA
A C G T A C G T A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:NCTKTNGCTGGG--
--YSTGGGTGGTCT
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:NCTKTNGCTGGG--
----TGCGTGGGYG
A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

GLI3/MA1491.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-NCTKTNGCTGGG--
CGNCGTGGGTGGTCN
A C G T A G T C T G A C A G C T A C T G A C G T A C T G C T A G A T G C A C G T A C T G A C T G A C T G A C G T A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T