Information for 1-AAGCTTSC (Motif 5)

C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C
Reverse Opposite:
A C T G A T C G C G T A C G T A A C T G A G T C C G A T A C G T
p-value:1e-5
log p-value:-1.259e+01
Information Content per bp:1.879
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif46.15%
Number of Background Sequences with motif1905.4
Percentage of Background Sequences with motif3.68%
Average Position of motif in Targets99.1 +/- 40.5bp
Average Position of motif in Background98.4 +/- 67.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:AAGCTTSC
AAGCTTG-
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AAGCTTSC
--GCTTCC
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAGCTTSC
-NGCTN--
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAGCTTSC------
TTCTAGAANNTTCCAGAANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

Elf4(ETS)/BMDM-Elf4-ChIP-Seq(GSE88699)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGCTTSC----
--ACTTCCKGKT
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A G T C C G A T A G C T A T G C G T A C A C G T A T C G C A G T G C A T

ETV4/MA0764.2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGCTTSC---
-NNCTTCCTGN
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C A C G T A C G T A C G T
A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AAGCTTSC---
---CTTCCGGT
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGCTTSC----
--ACTTCCGGNT
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T

PAX6/MA0069.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGCTTSC---
TTCACGCATGAGTT
A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C A C G T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AAGCTTSC----
--ACTTCCTGBT
C G T A C G T A A C T G A G T C C G A T A C G T A T G C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T