| p-value: | 1e-6 |
| log p-value: | -1.410e+01 |
| Information Content per bp: | 1.923 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 720.2 |
| Percentage of Background Sequences with motif | 1.03% |
| Average Position of motif in Targets | 84.5 +/- 61.7bp |
| Average Position of motif in Background | 99.6 +/- 67.6bp |
| Strand Bias (log2 ratio + to - strand density) | 1.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GAGTGATG TTRAGTGSYK |
|
|
|
MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GAGTGATG-- NNTGATTGATGNN |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GAGTGATG- TGATKGATGR |
|
|
|
PBX1/MA0070.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GAGTGATG- TTTGATTGATGN |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GAGTGATG- TGATTGATGA |
|
|
|
NKX2-5/MA0063.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GAGTGATG NNTTGAGTGNN- |
|
|
|
NKX2-2/MA1645.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GAGTGATG- NNNTTGAGTGGNNN |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 8 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GAGTGATG-- ATGATKGATGRC |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GAGTGATG TTGAGTGSTT |
|
|
|
Nkx2-5(var.2)/MA0503.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GAGTGATG CTTGAGTGGCT |
|
|
|