Information for 22-ACTATGGCTTGT (Motif 30)

C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C T G A G T C A G T C C G T A A C G T C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.807e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets105.0 +/- 0.0bp
Average Position of motif in Background143.7 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX13/MA1120.1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTATGGCTTGT
AAACAATGGCA---
A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACTATGGCTTGT-
GANTATTATGGGATGGA
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTATGGCTTGT
AAACAATGGAA---
A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACTATGGCTTGT
VRAACAATGG-----
A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ACTATGGCTTGT
VVRRAACAATGG-----
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACTATGGCTTGT
GAACAATGG-----
A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACTATGGCTTGT----
TATTATGGGATGGATAA
A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTATGGCTTGT
GAACAATGGN----
A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACTATGGCTTGT
GTCTGTGGTTT--
A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACTATGGCTTGT
RAACAATGGN----
A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C T G A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T