Information for 21-TTAATCTTAAAC (Motif 21)

A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C G T C G T A C G T A
p-value:1e-3
log p-value:-9.057e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets153.0 +/- 0.0bp
Average Position of motif in Background150.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTAATCTTAAAC-
TTAATGTTTAACC
A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

HNF1B/MA0153.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTAATCTTAAAC
GTTAATNATTAAC
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTAATCTTAAAC
TTAATNATTAAC
A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

HNF1A/MA0046.2/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTAATCTTAAAC-
AGTTAATGATTAACT
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTAATCTTAAAC
YTAATCCY----
A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTAATCTTAAAC
TTCTAATCTAT---
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTAATCTTAAAC
NYTAATCCYB---
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTAATCTTAAAC---
-CAAACGTAAACAAT
A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTAATCTTAAAC
TTAATCCG----
A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTAATCTTAAAC
TTTAAT-------
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T C G T A C G T A C G T A A G T C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T