Information for 20-CCATTCAGCC (Motif 34)

A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G A T C T A G C G T A C G T A A C G T A C T G A C T G
p-value:1e-1
log p-value:-4.323e+00
Information Content per bp:1.943
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif47.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets75.2 +/- 29.6bp
Average Position of motif in Background102.9 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCATTCAGCC
AACCAATCAGA-
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCATTCAGCC
AGCCAATCAGA-
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCATTCAGCC--
GTCCTTGAGCCCG
A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCATTCAGCC
ANCGTTTANN-
A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCATTCAGCC
ACTAGCCAATCA---
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCATTCAGCC
GGCCATTAAC--
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T

BARHL1/MA0877.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCATTCAGCC
NCGTTTAN--
A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCATTCAGCC
AGCCAATCGG--
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCATTCAGCC---
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCATTCAGCC-
NNCATTCATTCATNNN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T