Information for 3-STCTGTATATGA (Motif 3)

A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A
Reverse Opposite:
A C G T G A T C G T C A C A G T G C T A A G C T C G T A A G T C C G T A C T A G C T G A T A G C
p-value:1e-14
log p-value:-3.452e+01
Information Content per bp:1.631
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.7 +/- 25.5bp
Average Position of motif in Background129.9 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0144.1_Pou2f2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--STCTGTATATGA--
TTGTATGCAAATTAGA
A C G T A C G T A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--STCTGTATATGA--
TTGTATGCAAATTAGA
A C G T A C G T A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:STCTGTATATGA
-TATGCAAAT--
A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A
A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:STCTGTATATGA
-TATGCAAAT--
A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---STCTGTATATGA-
NNNNTTTGTTTACNNT
A C G T A C G T A C G T A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:STCTGTATATGA
--ATGMATATDC
A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:STCTGTATATGA-
-WATGCAAATGAG
A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU3F1/MA0786.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:STCTGTATATGA
TTATGCAAATTA
A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU1F1/MA0784.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-STCTGTATATGA-
AATATGCAAATTAG
A C G T A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:STCTGTATATGA
TTATGCAAATTA
A T C G G A C T G A T C G A C T C T A G C G A T T C G A C G A T G T C A C A G T C T A G G T C A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A