Information for 18-GCCAAAAGTA (Motif 31)

A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-6.915e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif18.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background66.8 +/- 69.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCAAAAGTA--
GCTAAAAATAGC
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCCAAAAGTA---
ATGCTAAAAATAGAA
A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCAAAAGTA--
KCCAAAAATAGC
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCAAAAGTA--
DCYAAAAATAGM
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAGTA
CGTGCCAAG----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCAAAAGTA
GGTGCCAAGT---
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCAAAAGTA----
TTCTAAAAATAGAAA
A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCAAAAGTA-
-CCAAAAATAG
A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCAAAAGTA-----
TGCCAAAATAAACANN
A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

E2F4/MA0470.2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GCCAAAAGTA
NAATGGCGCCAAAA---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T C G T A
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A A C G T A C G T A C G T