| p-value: | 1e-11 |
| log p-value: | -2.618e+01 |
| Information Content per bp: | 1.958 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 0.65% |
| Number of Background Sequences with motif | 2.5 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 94.9 +/- 42.7bp |
| Average Position of motif in Background | 144.2 +/- 32.2bp |
| Strand Bias (log2 ratio + to - strand density) | 1.8 |
| Multiplicity (# of sites on avg that occur together) | 1.33 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCCATCAGTGAT YCATCMATCA----- |
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PH0134.1_Pbx1/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TCCATCAGTGAT-- TCACCCATCAATAAACA |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TCCATCAGTGAT GYCATCMATCAT---- |
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|
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCCATCAGTGAT ATTGCATCAT---- |
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|
|
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCCATCAGTGAT ATTGCATCAK---- |
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|
|
Isl1/MA1608.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCCATCAGTGAT ATCCATTAGCA-- |
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|
NEUROD1/MA1109.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCCATCAGTGAT NNNCCATCTGTNN- |
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|
PB0195.1_Zbtb3_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCCATCAGTGAT-- NNNNTGCCAGTGATTG |
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|
NEUROG2(var.2)/MA1642.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCCATCAGTGAT NNCCATCTGTNNN |
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MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCCATCAGTGAT- GTCATCAATCATT |
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