Information for 18-TGACCCAGCAGG (Motif 26)

C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G
Reverse Opposite:
A G T C A G T C C A G T A T C G G A T C A C G T C A T G C T A G A T C G G A C T A T G C G C T A
p-value:1e-6
log p-value:-1.410e+01
Information Content per bp:1.759
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif228.8
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets119.5 +/- 53.9bp
Average Position of motif in Background101.3 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:TGACCCAGCAGG--
---CACAGCAGGGG
C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G A C G T A C G T
A C G T A C G T A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.80
Offset:3
Orientation:forward strand
Alignment:TGACCCAGCAGG---
---CACAGCAGGGGG
C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:TGACCCAGCAGG---
CCACACAGCAGGAGA
C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TGACCCAGCAGG---
-CTCACAGCAGGGGG
C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G A C G T A C G T A C G T
A C G T T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TGACCCAGCAGG---
CCACACAGCAGGAGA
C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:6
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGACCCAGCAGG
ATGACTCAGCAD-
A C G T C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TGACCCAGCAGG-----
--DCHCAGCAGGRGGCC
C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:8
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TGACCCAGCAGG
AGGATGACTCAGCAC-
A C G T A C G T A C G T A C G T C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G
C T G A A T C G T A C G T C G A G C A T A C T G C G T A A T G C C A G T T G A C C T G A A T C G A G T C C G T A A T G C A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:9
Score:0.77
Offset:3
Orientation:forward strand
Alignment:TGACCCAGCAGG---
---CHCAGCRGGRGG
C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGACCCAGCAGG
GATGACTCAGCA--
A C G T A C G T C A G T T A C G C T G A A T G C A G T C G A T C C G T A C A T G T A G C G C T A C T A G C T A G
T A C G T C G A C A G T A C T G G C T A A T G C C G A T G T A C C G T A A C T G T A G C C G T A A C G T A C G T