Information for 7-GCCATGGG (Motif 29)

A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A G C T A T C G A C T G G T A C
p-value:1e-4
log p-value:-1.021e+01
Information Content per bp:1.916
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.12%
Number of Background Sequences with motif690.8
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets120.6 +/- 55.3bp
Average Position of motif in Background100.9 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCATGGG--
NNCATGTGNN
A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C

EBF3/MA1637.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGGG--
NNTCCCTTGGGAN
A C G T A C G T A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

Ebf2/MA1604.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGGG--
NNTCCCTTGGGAN
A C G T A C G T A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCCATGGG--
NGTTGCCATGGCAA
A C G T A C G T A C G T A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

EBF1/MA0154.4/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCCATGGG----
NNTCCCCTGGGGANN
A C G T A C G T A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCCATGGG-
CGGTTGCTATGGCA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCATGGG---
TCCCCTGGGGAC
A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

YY2/MA0748.2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GCCATGGG
CGCCGCCATNN-
A C G T A C G T A C G T A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCCATGGG----
--CSTGGGAAAD
A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCATGGG--
GGTTGCCATGGCAA
A C G T A C G T A C G T A C G T A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A