Information for 6-GGCCAAACAGAT (Motif 9)

A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-9.120e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background27.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGCCAAACAGAT
AACCAATCAGA-
A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCCAAACAGAT
AGCCAATCAGA-
A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCCAAACAGAT
AGCCAATCGG--
A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GGCCAAACAGAT---
-----AACAGATGGT
A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAAACAGAT
NTGGCCAATGAG--
A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAACAGAT--
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGCCAAACAGAT
ACTAGCCAATCA---
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGCCAAACAGAT-----
----AAACAGATGTTTA
A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGCCAAACAGAT---
-----AACAGATGGC
A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCCAAACAGAT----
---GGAACAGATGGCA
A C T G A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A