Information for 8-GCGTACTTTC (Motif 13)

A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C
Reverse Opposite:
A T C G C G T A G T C A C G T A A C T G A G C T C G T A A G T C T C A G A G T C
p-value:1e-3
log p-value:-8.289e+00
Information Content per bp:1.805
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background89.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCGTACTTTC
TGCGTG-----
A C G T A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCGTACTTTC--
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCGTACTTTC-----
TNNNATGATTTCNNCNN
A C G T A C G T A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PH0061.1_Hoxb6/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCGTACTTTC---
TATTGGTAATTACCTT
A C G T A C G T A C G T A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCGTACTTTC---
---TGGTTTCAGT
A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

HOXA5/MA0158.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGTACTTTC
--GTAATTAC
A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C
A C G T A C G T A T C G A C G T G T C A C G T A A C G T A C G T C T G A T A G C

HNF4G/MA0484.2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGTACTTTC--
NNTGGACTTTGNN
A C G T A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C A C G T A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

HOXD8/MA0910.2/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCGTACTTTC
--GTAATTGC
A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C
A C G T A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCGTACTTTC
TTGCGTGCVA--
A C G T A C G T A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGTACTTTC--
NNTGGACTTTGNN
A C G T A C T G A G T C A C T G A C G T C T G A G T A C A C G T A C G T C G A T A T G C A C G T A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A