Information for 17-GCTTACCTAG (Motif 32)

A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A C T G A C G T C G T A C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.337e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background106.4 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCTTACCTAG
NNACTTACCTN-
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTTACCTAG-
-GTTAACTAGN
A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCTTACCTAG----
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTTACCTAG-----
GANGTTAACTAGTTTNN
A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

GATA2/MA0036.3/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTTACCTAG
TTCTTATCTTT
A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTTACCTAG
YCTTATCTBN
A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTTACCTAG-----
-TTGACCTANTTATN
A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTTACCTAG
NNCTTATCTN-
A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTTACCTAG---
NNANTCTTATCTNNNNN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCTTACCTAG-
AAATTTGCTGACTTAGA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C T G A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C