Information for 5-GACAGGTC (Motif 41)

A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C G T A C T G A C G T A G T C
p-value:1e-1
log p-value:-3.256e+00
Information Content per bp:1.931
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif337.0
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets108.5 +/- 63.7bp
Average Position of motif in Background106.8 +/- 81.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.82
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTC---
GGATTGACAGGTCNTT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTC---
NTATTGACAGGTNNTN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTC---
NTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTC---
GTATTGACAGGTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGGTC---
NNATTGACAGGTGCTT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MYOD1/MA0499.2/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GACAGGTC---
NNGACAGGTGCNN
A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G

SNAI2/MA0745.2/Jaspar

Match Rank:7
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GACAGGTC---
NNGACAGGTGCNN
A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GACAGGTC
TTGACAGG--
A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GACAGGTC
TTGACAGC--
A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GACAGGTC---
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C T A G C T A G A C G T A G T C A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T