| p-value: | 1e-3 |
| log p-value: | -8.289e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.69% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 106.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Sox17/MA0078.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TAGACAATATAG --GACAATGNN- |
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Mecom/MA0029.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TAGACAATATAG-- AAGATAAGATAACA |
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|
SRY/MA0084.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TAGACAATATAG GTAAACAAT---- |
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PB0168.1_Sox14_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAGACAATATAG- CTCACACAATGGCGC |
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|
Foxq1/MA0040.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAGACAATATAG AATAAACAATN--- |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAGACAATATAG BCAGACWA----- |
|
|
|
PB0183.1_Sry_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TAGACAATATAG- TCACGGAACAATAGGTG |
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|
|
SOX15/MA1152.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TAGACAATATAG AAAACAATAG-- |
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|
|
Smad4/MA1153.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAGACAATATAG TCTAGACA------ |
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|
|
PB0065.1_Sox15_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAGACAATATAG-- TAGTGAACAATAGATTT |
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