Information for 12-CCAATGGAGT (Motif 28)

A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.101e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif34.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background100.0 +/- 117.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCAATGGAGT
NTGGCCAATGAG--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCAATGGAGT
TTCCCAAGGGACT
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCAATGGAGT
AGCCAATCGG--
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

EBF3/MA1637.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCAATGGAGT
TTCCCAAGGGAAT
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

Isl1/MA1608.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCAATGGAGT
NNCTAATGGNN-
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCAATGGAGT
AAACAATGGAA-
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCAATGGAGT
AAACAATGGCA-
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCAATGGAGT
VRAACAATGG---
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCAATGGAGT
ACTAGCCAATCA---
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCAATGGAGT
GAACAATGG---
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C T G C G T A A C T G A C G T
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T