Information for 4-GAACTCTCCG (Motif 7)

A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C G T A A C T G C G T A A C T G A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.235e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAACTCTCCG
ATGAACTTT---
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTCCG----
NNAATTCTCGNTNAN
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAACTCTCCG----
ACCACTCTCGGTCAC
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

VDR/MA0693.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTCCG
TGAACTCA---
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAACTCTCCG----
AGTATTCTCGGTTGC
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

RELB/MA1117.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAACTCTCCG-
GAATTCCCCGG
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G A C G T
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GAACTCTCCG
----GCTCCG
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAACTCTCCG---
-VCCTCTCTGDDY
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T
A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAACTCTCCG
TTGAMCTTTG--
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GAACTCTCCG---
NNTTCTGGAANNTTCTAGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A