Information for 10-AAGGTGAAAGTT (Motif 16)

C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
p-value:1e-3
log p-value:-9.067e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets166.0 +/- 0.0bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AAGGTGAAAGTT
GAAAGTGAAAGT-
A C G T C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAGGTGAAAGTT
GAAAGTGAAAGT-
A C G T C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

THRB/MA1574.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGTGAAAGTT---
GGGGTCAAAGGTCAT
C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A A G C T

PPARD/MA1550.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGGTGAAAGTT---
AGGGGTCAAAGGTCAA
A C G T C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T C A

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------AAGGTGAAAGTT---
AAANNGAAAGTGAAAGTAAAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGGTGAAAGTT
GAAACTGAAACT-
A C G T C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGGTGAAAGTT---
GAGGTCAAAGGTCAC
C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGGTGAAAGTT----
AAAGGTCAAAGGTCAAC
A C G T C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGGTGAAAGTT--
VNAGGKCAAAGGTCA
A C G T C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGGTGAAAGTT--
GAGGTCAAAGGTCA
C G T A C G T A A C T G A C T G A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A