Information for 6-TCCTCTGCTATT (Motif 12)

A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A C T G A C T G C G T A
p-value:1e-4
log p-value:-9.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317/MA1593.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCCTCTGCTATT-
-NNTCTGCTGTNA
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C G T C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCTCTGCTATT---
NCNTTTGTTATTTNN
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

TCF7L1/MA1421.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCCTCTGCTATT-
-CCTTTGATCTTT
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCTGCTATT-
AACCCTTTGATCTTT
A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T

PB0106.1_Arid5a_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCCTCTGCTATT-----
TNNTTTCGTATTNNANN
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

HAND2/MA1638.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCTGCTATT
NNCATCTGNN---
A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:TCCTCTGCTATT-----
-------CTATTTTTGG
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCCTCTGCTATT--------
-----TTCTATTTTTAGNNN
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCCTCTGCTATT------
------KCTATTTTTRGH
A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCCTCTGCTATT----
NTCNTCCCCTATNNGNN
A C G T A C G T A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A