Information for 19-TACTGGTCACTC (Motif 18)

A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T C G T A
p-value:1e-3
log p-value:-8.830e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TACTGGTCACTC--
--NNGGTCACGCTC
A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TACTGGTCACTC
CYWSTGGTCARA-
A C G T A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TACTGGTCACTC
NTTATTCGTCATNC
A C G T A C G T A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TACTGGTCACTC----
NNNCCTGTCACTCANNN
A C G T A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PKNOX1/MA0782.2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TACTGGTCACTC---
NNGCTGTCACTCANN
A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

MSANTD3/MA1523.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TACTGGTCACTC--
----GTACACTCAC
A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

NR1H4/MA1110.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TACTGGTCACTC-
--NAGGTCATTGA
A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T
A C G T A C G T C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TACTGGTCACTC
----AGTCACGC
A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TACTGGTCACTC
---AGGTCA---
A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TACTGGTCACTC
WDNCTGGGCA---
A C G T A C G T C G T A A G T C A C G T A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T