Information for 23-CACACAGTCA (Motif 31)

A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A
Reverse Opposite:
C G A T C T A G C G T A A G T C A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-6
log p-value:-1.538e+01
Information Content per bp:1.947
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif154.2
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets119.0 +/- 52.7bp
Average Position of motif in Background100.4 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)-2.9
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CACACAGTCA-
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CACACAGTCA
--CACAGN--
A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACACAGTCA-
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZSCAN4/MA1155.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACACAGTCA---
TGCACACACTGAAAA
A C G T A C G T A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACACAGTCA
CACGCA----
A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CACACAGTCA-
--AAAAGTCAA
A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

Dmrt1/MA1603.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACACAGTCA-
GATACAAAGTATC
A C G T A C G T A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACACAGTCA
CCAGACAG---
A C G T A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACACAGTCA
AAAACAAAGAA-
A C G T A C G T A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CACACAGTCA-
---CCAATCAA
A G T C C G T A A G T C G T C A A G T C C G T A A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A