Information for 3-TCGAATCG (Motif 47)

A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T A C G T A G T C A C T G C G T A
p-value:1e-3
log p-value:-7.030e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background34.0 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TCGAATCG--
-CTAATCGNT
A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGAATCG
ATTTGAATT-
A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCGAATCG---
CGTATCGAAACCAAA
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TCGAATCG--
ATAAACCGAAACCAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

GATA1/MA0035.4/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCGAATCG--
TTCTAATCTAT
A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T
C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCGAATCG-
AGCCAATCGG
A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCGAATCG--
NTTGATTGAATCWGV
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

NFYC/MA1644.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCGAATCG--
AGCCAATCAGA
A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCGAATCG--
AACCAATCAGA
A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCGAATCG-----
CTGATCGAAACCAAAGT
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T