Information for 19-AATTAGCTAATT (Motif 21)

C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.929e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.5 +/- 0.5bp
Average Position of motif in Background103.5 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.85
Offset:-6
Orientation:reverse strand
Alignment:------AATTAGCTAATT--
HWWNNTAATTRGCHAATTAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C G A T C G A T C A G T G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A C G A T A G C T C T G A C T A G

PH0060.1_Hoxb5/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AATTAGCTAATT-----
-ATGNGCTAATTANCNT
C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AATTAGCTAATT-----
-NTNNGCTAATTANCNT
C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

PH0045.1_Hoxa1/Jaspar

Match Rank:4
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----AATTAGCTAATT
ACGGTAATTAGCTCAG-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AATTAGCTAATT-----
-NTGNGCTAATTACCNN
C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AATTAGCTAATT
AAGGTAATTAGCTCAT-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------AATTAGCTAATT
GTAACTAATTAACTACT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AATTAGCTAATT
CAGGTAATTACCTCAG-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G A C G T

PH0074.1_Hoxd1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AATTAGCTAATT------
-NNNAGCTAATTAGCTTA
C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A

PH0052.1_Hoxa5/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AATTAGCTAATT
ACGGTAATTAGCTCAG-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T
T C G A T G A C C T A G A C T G G A C T G T C A G T C A A C G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A C T A G A C G T