Information for 2-MAAACCCTWAAA (Motif 2)

T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A
Reverse Opposite:
C G A T A G C T A C G T G C A T C G T A C T A G C T A G C T A G G A C T C G A T G A C T A C G T
p-value:1e-14
log p-value:-3.278e+01
Information Content per bp:1.726
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif280.8
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets86.1 +/- 57.4bp
Average Position of motif in Background95.0 +/- 50.5bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:MAAACCCTWAAA----
AGAGCCATAAAATTCG
T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A A C G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:MAAACCCTWAAA
-AAACMATTAN-
T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:MAAACCCTWAAA
--VGCCATAAAA
T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A
A C G T A C G T T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

ZSCAN4/MA1155.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--MAAACCCTWAAA-
TGCACACACTGAAAA
A C G T A C G T T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---MAAACCCTWAAA--
TTGAAAACCGTTAATTT
A C G T A C G T A C G T T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---MAAACCCTWAAA--
ATGGAAACCGTTATTTT
A C G T A C G T A C G T T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MAAACCCTWAAA-
-HDGYAATGAAAN
T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A A C G T
A C G T G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

BARX2/MA1471.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-MAAACCCTWAAA
AAAAACCATTAC-
A C G T T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A
C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:MAAACCCTWAAA
--KGCCATAAAA
T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A
A C G T A C G T C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

MYBL2/MA0777.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MAAACCCTWAAA-----
--AACCGTTAAACGGTC
T G C A C G T A C G T A C T G A G A T C G A T C G A T C C G A T C G T A T G C A T C G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C