Information for 12-GCCTATAAGC (Motif 32)

A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G T A A C G T C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.036e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background72.8 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTATAAGC
AGCCAATCGG-
A C G T A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

NFYA/MA0060.3/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCTATAAGC
AACCAATCAGA
A C G T A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYB/MA0502.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCTATAAGC
NTGGCCAATGAG-
A C G T A C G T A C G T A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCTATAAGC-
CCCAATAAAAC
A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C A C G T
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

NFYC/MA1644.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTATAAGC
AGCCAATCAGA
A C G T A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCTATAAGC--
NTGCCCTTGGGCGN
A C G T A C G T A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

HOXA13/MA0650.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCTATAAGC-
CCCAATAAAAC
A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C A C G T
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCCTATAAGC-
-CAGATAAGGN
A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C A C G T
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCCTATAAGC
GNCTATAAAAGG
A C G T A C G T A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCTATAAGC
AGGTCTCTAACC
A C G T A C G T A C T G A G T C A G T C A C G T C G T A A C G T C G T A C G T A A C T G A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C