Information for 23-CTCCAGGCAGGC (Motif 24)

A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.155e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets190.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCCAGGCAGGC-----
--SCAGYCADGCATGAC
A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTCCAGGCAGGC--
---AAGGCAAGTGT
A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTCCAGGCAGGC
NNNCTTTCCAGGAAA--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCAGGCAGGC
--CCAGACAG--
A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCCAGGCAGGC
TTCCNGGAAG--
A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C
G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCCAGGCAGGC--
CAAATCCAGACATCACA
A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCCAGGCAGGC
--CCAGACRSVB
A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCCAGGCAGGC
-TNNGGGCAG--
A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCCAGGCAGGC-
TACTCCAGAAAAGAT
A C G T A C G T A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCCAGGCAGGC---
TCCCAGMCRAGCCCC
A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C