Information for 3-RWGKGGTAAAGT (Motif 3)

C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T
Reverse Opposite:
C G T A A G T C A C G T C A G T A C G T G T C A T G A C G T A C G T A C A G T C G C A T G A T C
p-value:1e-5
log p-value:-1.263e+01
Information Content per bp:1.646
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif3077.8
Percentage of Background Sequences with motif3.10%
Average Position of motif in Targets133.6 +/- 68.0bp
Average Position of motif in Background97.8 +/- 79.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF75D/MA1601.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:RWGKGGTAAAGT
ATGTGGGAAA--
C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----RWGKGGTAAAGT
TGCGGAGTGGGACTGG
A C G T A C G T A C G T A C G T C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---RWGKGGTAAAGT--
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---RWGKGGTAAAGT--
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---RWGKGGTAAAGT--
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---RWGKGGTAAAGT--
GCTGGGGGGTACCCCTT
A C G T A C G T A C G T C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RWGKGGTAAAGT
GGAGGGGGAA---
A C G T C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RWGKGGTAAAGT
-GGCGGGAARN-
C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T
A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RWGKGGTAAAGT
AGGTGTGAAA--
C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RWGKGGTAAAGT
AGGTGTGAAA--
C T A G C G T A A C T G C A T G A C T G A C T G A C G T G T C A G C T A G T C A T A C G G C A T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T