Information for 3-AGTGGWGCCC (Motif 6)

G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
Reverse Opposite:
A C T G C A T G T C A G A G T C C G A T A G T C A T G C C G T A A G T C A C G T
p-value:1e-10
log p-value:-2.340e+01
Information Content per bp:1.810
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif89.6
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets89.5 +/- 54.8bp
Average Position of motif in Background94.1 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTGGWGCCC
-GTGGAT---
G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGTGGWGCCC-
-GTGGGCCCCA
G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C A C G T
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTGGWGCCC
TTRAGTGSYK---
A C G T A C G T A C G T G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTGGWGCCC------
GGGTGTGCCCAAAAGG
G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGWGCCC
NTCAAGTGGN----
A C G T A C G T A C G T A C G T G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGWGCCC
TTAAGTGGT----
A C G T A C G T A C G T G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGWGCCC
NTCAAGTGG-----
A C G T A C G T A C G T A C G T G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGTGGWGCCC
NNNTTGAGTGGNNN--
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGTGGWGCCC
BTBRAGTGSN----
A C G T A C G T A C G T A C G T G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGWGCCC
CTYRAGTGSY----
A C G T A C G T A C G T A C G T G T C A A C T G C G A T A T C G C T A G C G T A A C T G A G T C G T A C A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T