Information for 9-CCCTCTCTCTCA (Motif 12)

A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A
Reverse Opposite:
C G A T A C T G C T G A A C T G C G T A A T C G C T G A C T A G C T G A C T A G C T A G C T A G
p-value:1e-8
log p-value:-1.902e+01
Information Content per bp:1.741
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif6.61%
Number of Background Sequences with motif769.5
Percentage of Background Sequences with motif1.56%
Average Position of motif in Targets127.8 +/- 54.5bp
Average Position of motif in Background99.8 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCCTCTCTCTCA
TTCTTTCTCTT-
A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTCTCTCA---
NNNCCTGTCACTCANNN
A C G T A C G T A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

GATA4/MA0482.2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCCTCTCTCTCA
TTCCTTATCTTT--
A C G T A C G T A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCTCTCTCTCA--
--VCCTCTCTGDDY
A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A A C G T A C G T
A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCTCTCTCTCA-
-NCTGTCAATCAN
A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PKNOX1/MA0782.2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCTCTCTCA--
NNGCTGTCACTCANN
A C G T A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

ZNF148/MA1653.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCTCTCTCTCA
CCCCCCTCCCCC---
A C G T A C G T A C G T A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A
A G T C A T G C A T G C A T G C A T G C T A G C C A G T A T G C A G T C G A T C A T G C A T G C A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCTCTCTCTCA
GSCTGTCACTCA
A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCCTCTCTCTCA
CCCCTCCCCCAC-
A C G T A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTCTCTCTCA--
ANTCCTTTGTCTNNNN
A C G T A C G T A G T C G A T C G A T C G A C T G A T C G A C T A T G C A C G T G T A C G A C T T G A C G C T A A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T