| p-value: | 1e-4 |
| log p-value: | -1.079e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 25.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 182.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Dux/MA0611.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TGCAATCAACCT -CCAATCAA--- |
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Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGCAATCAACCT RGCAATNAAA-- |
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|
PH0026.1_Duxbl/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TGCAATCAACCT-- CGACCCAATCAACGGTG |
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|
CDX2/MA0465.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGCAATCAACCT AAGCAATAAAAA- |
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|
|
PH0037.1_Hdx/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TGCAATCAACCT- AAGGCGAAATCATCGCA |
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|
|
HOXD13/MA0909.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGCAATCAACCT CCCAATAAAAC- |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGCAATCAACCT GGCCATTAAC-- |
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|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGCAATCAACCT GGCCATAAAAC- |
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|
|
HOXD9/MA0913.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TGCAATCAACCT -GCAATAAAAC- |
|
|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGCAATCAACCT HDGYAATGAAAN- |
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