Information for 12-GGAGGCCTTGAG (Motif 12)

A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A C G T A A C T G A C T G A G T C A G T C A C G T A G T C A G T C
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets13.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGAGGCCTTGAG
--AGGCCTNG--
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGAGGCCTTGAG
--TGACCTTGAN
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGAGGCCTTGAG
--AGGCCTAG--
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCTTGAG---
GCTGACCTTGAACTN
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NR5A1/MA1540.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGAGGCCTTGAG
-NTGACCTTGAN
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
A C G T C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAGGCCTTGAG
--TGACCTTGAV
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGAGGCCTTGAG----
---GTCCTTGAGCCCG
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCTTGAG
BNTGDCCTTG--
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

ESRRA/MA0592.3/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCTTGAG-
NNTGACCTTGANN
A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G A C G T
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGAGGCCTTGAG
HAWGRGGCCM----
A C G T A C G T A C T G A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C T G C G T A A C T G
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T A C G T