Information for 5-RTTCNGTGTTCC (Motif 5)

C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C
Reverse Opposite:
A C T G A C T G T C G A G C T A A T G C G T C A A T G C C A T G C T A G G C T A C G T A A G T C
p-value:1e-3
log p-value:-8.815e+00
Information Content per bp:1.592
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1904.9
Percentage of Background Sequences with motif2.43%
Average Position of motif in Targets85.8 +/- 63.0bp
Average Position of motif in Background99.4 +/- 75.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:RTTCNGTGTTCC---
-----CTGTTCCTGG
C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:RTTCNGTGTTCC-
---TKCTGTTCCA
C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-RTTCNGTGTTCC---
NNNNTTGTGTGCTTNN
A C G T C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-RTTCNGTGTTCC----
CGAACAGTGCTCACTAT
A C G T C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RTTCNGTGTTCC--
GTGCCGTGTGCAAA
C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:RTTCNGTGTTCC-
------TTTTCCA
C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

IRF3/MA1418.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RTTCNGTGTTCC-------
CAGTTTCGGTTTCCNTTTCCN
A C G T A C G T C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T C G A A T C G C G A T C G A T A C G T A G T C T A C G T A C G G C A T G A C T A G C T G A T C T A G C C A T G C G A T G A C T G A C T G A T C A T G C A T G C

ELF2/MA1483.1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RTTCNGTGTTCC
NACTTCCGGGTT--
A C G T A C G T C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C
A G C T C T G A A G T C C G A T A G C T G A T C A G T C C A T G A T C G C A T G C G A T G C A T A C G T A C G T

IRF4/MA1419.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RTTCNGTGTTCC-
TAGTTTCGGTTTCGG
A C G T A C G T C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T
G C A T C T G A A T C G C A G T G C A T A C G T A G T C C T A G T A C G C G A T G C A T C A G T A G T C C T A G C T A G

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RTTCNGTGTTCC---
TNNTTTCGTATTNNANN
A C G T A C G T C T A G C G A T C G A T G A T C G A T C T A C G C A G T T A C G C G A T A C G T T G A C T G A C A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G