Information for 1-MGWTSTMWWATK (Motif 1)

G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G
Reverse Opposite:
G T A C C G T A A C G T C G T A C G T A A C T G C G T A T A C G C G T A C G A T A G T C A C G T
p-value:1e-8
log p-value:-1.866e+01
Information Content per bp:1.783
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif100.00%
Number of Background Sequences with motif425.3
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets128.7 +/- 62.2bp
Average Position of motif in Background101.6 +/- 105.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:MGWTSTMWWATK--
--ATGCATAATTCA
G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-MGWTSTMWWATK-
NNTTTTTCTTATNT
A C G T G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----MGWTSTMWWATK
GACAGAGATATCAGTGT
A C G T A C G T A C G T A C G T A C G T G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--MGWTSTMWWATK-
AGNGTTCTAATGANN
A C G T A C G T G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:MGWTSTMWWATK------
----CTAATATTGCTAAA
G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:MGWTSTMWWATK------
----CTAATATTGCTAAA
G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----MGWTSTMWWATK-
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----MGWTSTMWWATK-
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----MGWTSTMWWATK-
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:MGWTSTMWWATK
-GTTGCGCAAT-
G T C A A C T G C G T A A C G T A T C G A C G T G T A C C G A T C G A T C G T A A C G T A C T G
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T