| p-value: | 1e-5 |
| log p-value: | -1.188e+01 |
| Information Content per bp: | 1.966 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 0.67% |
| Number of Background Sequences with motif | 16.5 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 134.6 +/- 28.7bp |
| Average Position of motif in Background | 104.8 +/- 58.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0134.1_Pbx1/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GCTTGATGGA--- NNNNNATTGATGNGTGN |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GCTTGATGGA--- ---TGATKGATGR |
|
|
|
PBX1/MA0070.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GCTTGATGGA TTTGATTGATGN- |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GCTTGATGGA---- --ATGATKGATGRC |
|
|
|
MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GCTTGATGGA NNTGATTGATGNN |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GCTTGATGGA TGATTGATGA- |
|
|
|
Dux/MA0611.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GCTTGATGGA --TTGATTGN |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GCTTGATGGA- -GTTAATGGCC |
|
|
|
PB0144.1_Lef1_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GCTTGATGGA- NNANTGATTGATNTTN |
|
|
|
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GCTTGATGGA-- --ATGATGCAAT |
|
|
|