Information for 23-CCCACTTGTGCT (Motif 28)

A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.694e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background123.2 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCCACTTGTGCT
--CACGTGTGCH
A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCCACTTGTGCT
ACCACTTGAA--
A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCCACTTGTGCT-
TAAGCCACTTGAAATT
A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCACTTGTGCT
-CCACTTGAA--
A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCCACTTGTGCT-
TAAGCCACTTAACATT
A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCCACTTGTGCT-
TAAGCCACTTGAATTT
A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCACTTGTGCT
ACACACCTGTGC-
A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T
T C G A T G A C T C G A T G A C C G T A A T G C T A G C A C G T A C T G A G C T A C T G G A T C A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCACTTGTGCT
GCACACCTGKNC-
A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T
T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCACTTGTGCT-
TAAGCCACTTGAAATT
A C G T A C G T A C G T A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Npas2/MA0626.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCCACTTGTGCT
GGCACGTGTC--
A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C G T
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T