Information for 10-RCCATGTCAKSC (Motif 10)

C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
Reverse Opposite:
A C T G A T C G G T A C C G A T A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G C T
p-value:1e-4
log p-value:-9.395e+00
Information Content per bp:1.718
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2119.8
Percentage of Background Sequences with motif1.63%
Average Position of motif in Targets107.5 +/- 54.7bp
Average Position of motif in Background100.5 +/- 90.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ATF6/MA1466.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--RCCATGTCAKSC
NTGCCACGTCATCA
A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
T A G C G A C T C A T G G T A C G A T C C T G A A G T C C T A G G A C T G T A C C T G A A G C T T G A C T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--RCCATGTCAKSC
ATGCCACGTCATCA
A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

CREB3L4/MA1474.1/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-RCCATGTCAKSC
TGCCACGTCACC-
A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
A G C T C A T G G T A C G T A C T C G A A G T C T C A G A G C T T A G C T C G A A G T C A T G C A C G T

XBP1/MA0844.1/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---RCCATGTCAKSC
AATGCCACGTCATC-
A C G T A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C A C G T

CREB3/MA0638.1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--RCCATGTCAKSC
GTGCCACGTCATCA
A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

NFIC/MA0161.2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---RCCATGTCAKSC
NNTGCCAAGNN----
A C G T A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--RCCATGTCAKSC
TTGCCATGGCAACN
A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RCCATGTCAKSC
TTGCCATGGCAACC
A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---RCCATGTCAKSC
CGTGCCAAG------
A C G T A C G T A C G T C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:RCCATGTCAKSC
KCCACGTGAC--
C T G A A G T C A G T C C G T A G A C T C T A G G A C T T G A C C G T A A C T G A T G C T A G C
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T