Information for 21-GAAATAATTCCT (Motif 27)

A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-7.694e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background135.4 +/- 44.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GAAATAATTCCT
--AATAATT---
A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAAATAATTCCT---
GATAATTAATCCCTCTT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAAATAATTCCT---
NANANTTAATCCCNNNN
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0020.1_Dlx1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAATAATTCCT
CTGAGGTAATTAAT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

PH0106.1_Msx1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAAATAATTCCT----
NNATTAATTAGTNGNN
A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A

PH0129.1_Otx1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAAATAATTCCT---
NNNAATTAATCCCCNCN
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T

PH0022.1_Dlx3/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAAATAATTCCT---
TCGCGATAATTACCGAC
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAAATAATTCCT--
----GCATTCCAGN
A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAATAATTCCT---
GAAAATTAATTACTTCG
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

PH0062.1_Hoxb7/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAATAATTCCT--
TNNCATTAATTANTNC
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C