Information for 3-TTCTTCGCAC (Motif 10)

A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A C T G C G T A C G T A A C T G C G T A C G T A
p-value:1e-3
log p-value:-8.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTCTTCGCAC-
TACTTGGCAGA
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTCTTCGCAC---
---TTMACACCTT
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCTTCGCAC-
-NNTTGGCANN
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Stat5a/MA1624.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTCTTCGCAC
NNTTCTTGGAAN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C
C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTCTTCGCAC---
NTTTTCACACCTT
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX18/MA1565.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTCTTCGCAC----
--NTTCACACCTCC
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTCTTCGCAC-
-HTTTCCCASG
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTCTTCGCAC---
--CTTCACACCTA
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTCTTCGCAC-
-NNTTCCCANN
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T
A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCTTCGCAC---
---TTVACACCTH
A C G T A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C