Information for 19-CAGATTGGATAC (Motif 25)

A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.938e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CAGATTGGATAC
NCTGATTGGNN--
A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGATTGGATAC
NCTGATTGGNN--
A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAGATTGGATAC-----
CTACTTGGATACGGAAT
A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGATTGGATAC
CCGATTGGCT--
A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGATTGGATAC----
-NNATNTGATANNNNN
A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGATTGGATAC-
-TGATTGGCTANN
A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

GATA1/MA0035.4/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGATTGGATAC
NNAGATTAGAN--
A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAGATTGGATAC
GGAACAGATGGCA---
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAGATTGGATAC-------
ACTGACCCTTGGTTACCACAAAG
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

NEUROD1/MA1109.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGATTGGATAC
GGACAGATGGCAG--
A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G A C G T A C G T