Information for 1-TCCGAATA (Motif 21)

A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A C G A T A G C T A T G C A C T G A C T G C G T A
p-value:1e-6
log p-value:-1.424e+01
Information Content per bp:1.854
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.12%
Number of Background Sequences with motif288.3
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets109.9 +/- 52.9bp
Average Position of motif in Background103.8 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TCCGAATA---
GTACATCCGGATTTTT
A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCGAATA-
ACCGATTAG
A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A A C G T
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

BSX/MA0876.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCCGAATA-
-CCAATTAA
A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A A C G T
A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

PB0075.1_Sp100_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCCGAATA--
ATTTTCCGNNAAAT
A C G T A C G T A C G T A C G T A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A A C G T A C G T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCCGAATA-
TAATCHGATTAC
A C G T A C G T A C G T A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A A C G T
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

PB0011.1_Ehf_1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCCGAATA--
TNACTTCCGGNTNNN
A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A A C G T A C G T
A G C T G C A T C T G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G T C A G C G A T G T A C T G A C A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCCGAATA-
-GCAATTAG
A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A A C G T
A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCCGAATA
TACATCCGGGT-
A C G T A C G T A C G T A C G T A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCCGAATA
NRYTTCCGGH--
A C G T A C G T A C G T A C G T A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A
A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCCGAATA
NRYTTCCGGY--
A C G T A C G T A C G T A C G T A C G T G T A C A G T C A T C G C T G A C G T A A C G T C G T A
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T