| p-value: | 1e-5 |
| log p-value: | -1.270e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 0.27% |
| Number of Background Sequences with motif | 3.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 140.5 +/- 24.7bp |
| Average Position of motif in Background | 107.8 +/- 39.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 2.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RFX1/MA0509.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.88 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCATAGCAACCA TNCCATAGCAACNN |
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RFX3/MA0798.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.87 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCATAGCAACCA TNCCATAGCAACNN |
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PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.87 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCATAGCAACCA- TACCATAGCAACGGT |
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PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.84 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CCATAGCAACCA----- TGTGACCCTTAGCAACCGATTAA |
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PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.82 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCATAGCAACCA- CCGCATAGCAACGGA |
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|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 6 |
| Score: | 0.78 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCATAGCAACCA SCCTAGCAACAG |
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|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 7 |
| Score: | 0.74 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CCATAGCAACCA TTGCCATGGCAACC- |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 8 |
| Score: | 0.74 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CCATAGCAACCA TTGCCATGGCAACN- |
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|
RFX7/MA1554.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CCATAGCAACCA --NTAGCAACG- |
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RFX5/MA0510.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CCATAGCAACCA CGTTGCCATGGCAACG- |
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