Information for 21-GGCTGAATTG (Motif 39)

A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.152e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background78.0 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCTGAATTG-----
GGACTGAATTCATGCC
A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCTGAATTG-------
GGAAAAATTGTTAGGAA
A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCTGAATTG-------
---AAAATTGTTATGAA
A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCTGAATTG---
NNNTATTGAATTGNNN
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

ZNF140/MA1589.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCTGAATTG-------
TAGGAGTGGAATTGCTGGGTC
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A C A T G C T A G T C G A C T A G A G C T C T A G C A T G C G T A T C G A A G C T C G A T T C A G G A T C G C A T C T A G C T A G C T A G A G C T G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTGAATTG
NGCTN-----
A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGCTGAATTG-
---NTAATTGG
A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCTGAATTG-----
NNATNAATTGTTTNN
A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGAATTG-----
ANNCATTAATTGCTNGN
A C G T A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCTGAATTG-----
ANNCATTAATTGCTNGN
A C G T A C G T A C T G A C T G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T