Information for 13-CTTAAAAATGCC (Motif 15)

A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G
p-value:1e-3
log p-value:-8.783e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTTAAAAATGCC---
GAAAAAATTGCAAGG
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Hoxa11/MA0911.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTAAAAATGCC
GGTCGTAAAATT---
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTAAAAATGCC
AGTCGTAAAAA----
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T A C G T A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CTTAAAAATGCC
AAAGCTCGTAAAATTT--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTTAAAAATGCC--------
GTTCCAAAATGGCTGCCTCCG
A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTTAAAAATGCC---
---CAAGATGGCGGC
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTTAAAAATGCC
--NAACAAT---
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

POU4F3/MA0791.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTTAAAAATGCC-
CTCATTAATTATGCAT
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

HOXD10/MA1506.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CTTAAAAATGCC
GGTCGTAAAAC----
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C A C G T A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CTTAAAAATGCC
TTAGGTCGTAAAATTTC-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A C T G A G T C A G T C
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C A C G T