Information for 2-TTGAACTGAC (Motif 5)

A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G A C G T A C G T A G T C C G T A G T C A
p-value:1e-6
log p-value:-1.386e+01
Information Content per bp:1.926
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif376.6
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets98.8 +/- 74.7bp
Average Position of motif in Background97.1 +/- 73.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTGAACTGAC
-TGAACTCA-
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C
A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTGAACTGAC
ATGAACTTT-
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGAACTGAC
TTGAMCTTTG
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTGAACTGAC-
---AACCGANA
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C A C G T
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

MYB/MA0100.3/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGAACTGAC
ACCAACTGTC
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAACTGAC
TGACCTTGACCT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGAACTGAC-
-CCAACTGCCA
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C A C G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTGAACTGAC----
CGACCAACTGCCATGC
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGAACTGAC-
-NHAACBGYYV
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGAACTGAC
-TGACCTYA-
A C G T A C G T A C T G C G T A C G T A A G T C C G A T A C T G G T C A G T A C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T