Information for 12-TCTGAACTCG (Motif 25)

A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A
p-value:1e-3
log p-value:-7.538e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background118.3 +/- 42.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TCTGAACTCG
--TGAACTCA
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G
A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCTGAACTCG
-ATGAACTTT
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G
A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCTGAACTCG-
-TTGAMCTTTG
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G A C G T
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCTGAACTCG-
-CTGACCTTTG
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTGAACTCG
--TGACCTYA
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAACTCG----
NNTTTGCACACGGCCC
A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCTGAACTCG
-NTGACCTN-
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G
A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTGAACTCG
--TGACCYCT
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTGAACTCG--
--TGACCTTGAT
A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0115.1_Ehf_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAACTCG--
AAGATCGGAANTNNNA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C T G A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A