| p-value: | 1e-7 |
| log p-value: | -1.646e+01 |
| Information Content per bp: | 1.786 |
| Number of Target Sequences with motif | 21.0 |
| Percentage of Target Sequences with motif | 2.28% |
| Number of Background Sequences with motif | 262.8 |
| Percentage of Background Sequences with motif | 0.54% |
| Average Position of motif in Targets | 105.8 +/- 65.6bp |
| Average Position of motif in Background | 98.3 +/- 60.7bp |
| Strand Bias (log2 ratio + to - strand density) | 1.1 |
| Multiplicity (# of sites on avg that occur together) | 1.25 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AGTTCCAACT CAAAGKTCAA--- |
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NR1I3/MA1534.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AGTTCCAACT AAAGTTCAT--- |
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|
VDR/MA0693.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AGTTCCAACT TGAGTTCA---- |
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MYB/MA0100.3/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AGTTCCAACT--- ---ACCAACTGTC |
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|
|
LIN54/MA0619.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGTTCCAACT NATTCAAAT- |
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|
|
PB0194.1_Zbtb12_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AGTTCCAACT--- AGNGTTCTAATGANN |
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|
|
PB0150.1_Mybl1_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AGTTCCAACT------ -CGACCAACTGCCGTG |
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|
|
NFIA/MA0670.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGTTCCAACT GGTGCCAAGT |
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|
|
Hic1/MA0739.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AGTTCCAACT -ATGCCAACC |
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|
|
PB0149.1_Myb_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AGTTCCAACT------- -CGACCAACTGCCATGC |
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