Information for 13-TAACAACAATAA (Motif 9)

C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A
Reverse Opposite:
C G A T A C G T C G T A A C G T A C G T C A T G A C G T A C G T A T C G A C G T A C G T C G T A
p-value:1e-10
log p-value:-2.341e+01
Information Content per bp:1.875
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif67.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets99.9 +/- 41.8bp
Average Position of motif in Background116.9 +/- 52.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TAACAACAATAA
NTTNAGAACAATTA
A C G T A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TAACAACAATAA---
TTAAGAACAATAAATT
A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TAACAACAATAA---
TTTAGAACAATAAAAT
A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TAACAACAATAA--
NNTNANAACAATTNNA
A C G T A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TAACAACAATAA
AACAAACAACAAGAG
A C G T A C G T A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TAACAACAATAA----
TNNAGAACAATANATNN
A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TAACAACAATAA-------
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0172.1_Sox1_2/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TAACAACAATAA
NNNTAACAATTATAN
A C G T A C G T A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0122.1_Foxk1_2/Jaspar

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAACAACAATAA--
CAAACAACAACACCT
A C G T C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TAACAACAATAA
---NAACAAT--
C G A T C G T A C G T A T A G C C G T A C G T A G T A C G T C A C G T A A C G T G T C A C G T A
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T