Information for 2-ACATACGGCT (Motif 6)

C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGCT
TACATCCGGGT
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

NEUROD2/MA0668.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGCT
ACCATATGGC-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGCT
NACATATGGN-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACATACGGCT
AACATATGTC-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACATACGGCT
ACATATGG--
C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACATACGGCT----
GTACATCCGGATTTTT
A C G T A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

NEUROG1/MA0623.2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGCT
GACATATGTC-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACATACGGCT
AACATATGTT-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACATACGGCT
NGCCATATGGTG
A C G T A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGCT
AACAKATGGY-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G A G T C A C G T
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T