| p-value: | 1e-8 |
| log p-value: | -1.981e+01 |
| Information Content per bp: | 1.785 |
| Number of Target Sequences with motif | 12.0 |
| Percentage of Target Sequences with motif | 3.31% |
| Number of Background Sequences with motif | 152.4 |
| Percentage of Background Sequences with motif | 0.31% |
| Average Position of motif in Targets | 108.6 +/- 58.6bp |
| Average Position of motif in Background | 110.1 +/- 59.0bp |
| Strand Bias (log2 ratio + to - strand density) | 1.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0134.1_Pbx1/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TWACCCATCA------- TCACCCATCAATAAACA |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TWACCCATCA-- --GGCCATTAAC |
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MZF1(var.2)/MA0057.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TWACCCATCA TTCCCCCTAC |
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|
|
NFYC/MA1644.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TWACCCATCA-- -AGCCAATCAGA |
|
|
|
NFYA/MA0060.3/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TWACCCATCA-- -AACCAATCAGA |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TWACCCATCA YCATCMATCA |
|
|
|
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TWACCCATCA---- TTAACCCTTTVNKKN |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TWACCCATCA- GYCATCMATCAT |
|
|
|
Isl1/MA1608.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TWACCCATCA--- --ATCCATTAGCA |
|
|
|
ZNF652/MA1657.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TWACCCATCA NTTAACTCTTTN |
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