Information for 3-TCGATGAT (Motif 40)

A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T A G T C A C T G C G T A
p-value:1e-2
log p-value:-5.716e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif104.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background101.3 +/- 103.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX2/MA0755.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TCGATGAT
TTATCGATTA-
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TCGATGAT
NTATCGATTA-
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A A C G T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCGATGAT
TATCGATNAN
A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCGATGAT--------
TNNNATGATTTCNNCNN
A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PH0017.1_Cux1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCGATGAT-----
TAATGATGATCACTA
A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TCGATGAT--
NNTAAAAACGATGTTNT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCGATGAT
DGATCRATAN-
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T

DPRX/MA1480.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCGATGAT---
-AGATAATCCC
A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

PAX7/MA0680.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCGATGAT
TAATCGATTA-
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TCGATGAT
AAAAAATCGATAAT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T