Information for 7-GTGTCAGACATG (Motif 14)

A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A C G T A G T C A C G T A C T G C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.879e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background187.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GTGTCAGACATG
AGGTGHCAGACA--
A C G T A C G T A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCAGACATG
AGGTGNCAGACAG-
A C G T A C G T A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GTGTCAGACATG
TNNNNGGTGTCATNTNT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCAGACATG
VBTGWCAGCB---
A C G T A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTCAGACATG
NTGTCAN-----
A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTGTCAGACATG---
CAAATCCAGACATCACA
A C G T A C G T A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGTCAGACATG
SCTGTCAVTCAV-
A C G T A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGTCAGACATG
NCTGTCAATCAN-
A C G T A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTGTCAGACATG
---BCAGACWA-
A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTGTCAGACATG-
---CCAGACRSVB
A C T G A C G T A C T G A C G T A G T C C G T A A C T G C G T A A G T C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C