Information for 14-GATCCATTAAAA (Motif 14)

A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T A G T C
p-value:1e-4
log p-value:-9.751e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GATCCATTAAAA---
-AACCAATAAAATTT
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
A C G T C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GATCCATTAAAA---
AGAGCCATAAAATTCG
A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GATCCATTAAAA----
AACCCAATAAAATTCG
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GATCCATTAAAA
-ATCCATTAGCA
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A
A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GATCCATTAAAA
-----ATTAAA-
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GATCCATTAAAA----
CTACCAATAAAATTCT
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GATCCATTAAAA
AAAAACCATTAAGG
A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GATCCATTAAAA-----
AATGCAATAAAATTTAT
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GATCCATTAAAA--
NNCATTCATTCATNNN
A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

NKX6-3/MA1530.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GATCCATTAAAA
--CTCATTAAA-
A C T G C G T A A C G T A G T C A G T C C G T A A C G T A C G T C G T A C G T A C G T A C G T A
A C G T A C G T T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T