Information for 5-CCTTTKWT (Motif 28)

A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T
Reverse Opposite:
G T C A G C A T G T A C C G T A C G T A C G T A A T C G A T C G
p-value:1e-4
log p-value:-1.010e+01
Information Content per bp:1.765
Number of Target Sequences with motif188.0
Percentage of Target Sequences with motif22.60%
Number of Background Sequences with motif8280.1
Percentage of Background Sequences with motif17.20%
Average Position of motif in Targets89.8 +/- 55.7bp
Average Position of motif in Background100.7 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0040.1_Lef1_1/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----CCTTTKWT-----
AATCCCTTTGATCTATC
A C G T A C G T A C G T A C G T A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----CCTTTKWT-----
ATTTCCTTTGATCTATA
A C G T A C G T A C G T A C G T A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CCTTTKWT
CCWTTGTY
A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CCTTTKWT--
CCTTTGATST
A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTKWT-----
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CCTTTKWT-
NCCATTGTTC
A C G T A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SOX4/MA0867.2/Jaspar

Match Rank:7
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTKWT-
NCCTTTGTTC
A C G T A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTKWT-----
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----CCTTTKWT-----
NNTTCCTTTGATCTANA
A C G T A C G T A C G T A C G T A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CCTTTKWT--
YCTTTGTTCC
A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C