Information for 18-ATGAAAGGCTTC (Motif 25)

C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.464e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background140.1 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATGAAAGGCTTC
ASATCAAAGG----
A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAAAGGCTTC
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAGGCTTC
AAAGATCAAAGGAA--
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAGGCTTC
AAAGATCAAAGGGTT-
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAAAGGCTTC
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.61
Offset:7
Orientation:forward strand
Alignment:ATGAAAGGCTTC-
-------GCTTCC
C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

TCF7/MA0769.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATGAAAGGCTTC
ANATCAAAGNN---
A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAGGCTTC
GGYAATGAAA------
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATGAAAGGCTTC
ACATCAAAGG----
A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAGGCTTC
GGCMATGAAA------
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C G T A C G T A G T C
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T