| p-value: | 1e-5 |
| log p-value: | -1.357e+01 |
| Information Content per bp: | 1.691 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 40.00% |
| Number of Background Sequences with motif | 717.1 |
| Percentage of Background Sequences with motif | 0.89% |
| Average Position of motif in Targets | 103.0 +/- 30.5bp |
| Average Position of motif in Background | 94.8 +/- 68.7bp |
| Strand Bias (log2 ratio + to - strand density) | 1.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCTATCWAMSA RGCAATNAAA-- |
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|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGCTATCWAMSA HDGYAATGAAAN- |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGCTATCWAMSA KGCCATAAAA-- |
|
|
|
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCTATCWAMSA AGGTCTCTAACC |
|
|
|
HOXD9/MA0913.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AGCTATCWAMSA -GCAATAAAAC- |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCTATCWAMSA GGCCATAAAAC- |
|
|
|
CDX4/MA1473.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCTATCWAMSA GGCAATAAAAC- |
|
|
|
TCF7/MA0769.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGCTATCWAMSA- --ANATCAAAGNN |
|
|
|
POL012.1_TATA-Box/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AGCTATCWAMSA----- --GTATAAAAGGCGGGG |
|
|
|
TBP/MA0108.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AGCTATCWAMSA----- --GTATAAAAGGCGGGG |
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