Information for 1-TTACGACG (Motif 39)

A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C T G A C G T C G T A C G T A
p-value:1e-2
log p-value:-6.814e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif33.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background74.5 +/- 115.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA9/MA0594.2/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---TTACGACG
NNTTTACGAC-
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:2
Score:0.83
Offset:-6
Orientation:reverse strand
Alignment:------TTACGACG---
NNNATTTTACGACNNTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G A C G T A C G T A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

HOXC9/MA0485.2/Jaspar

Match Rank:3
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---TTACGACG
NTTTTACGAC-
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:4
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TTACGACG
NTTTTACGAC-
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:5
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------TTACGACG---
ANNATTTTACGACNTNA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------TTACGACG---
GNNNTTTTACGACCTNA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----TTACGACG---
ANNTTTTACGACNTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----TTACGACG---
NNNTTTTACGACNTTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---TTACGACG
NTTTTACGAC-
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T

HOXD10/MA1506.1/Jaspar

Match Rank:10
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TTACGACG
NTTTTACGACC
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A G T C A C T G
C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C