Information for 3-BCTCTDCTTGGD (Motif 3)

A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T
Reverse Opposite:
G C T A A T G C A G T C C T G A C T G A C A T G G C T A C G T A A C T G C T G A T A C G T C G A
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.679
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif26.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets113.5 +/- 56.5bp
Average Position of motif in Background101.6 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF1/MA0473.3/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-BCTCTDCTTGGD-
NNCACTTCCTGNNN
A C G T A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T
A T G C A G T C A G T C G C T A A G T C G C A T A C G T G A T C T A G C A C G T A T C G A C G T G A C T G A C T

ETV4/MA0764.2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:BCTCTDCTTGGD
-NNCTTCCTGN-
A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T
A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:BCTCTDCTTGGD-
--NCTGATTGGNN
A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

ELF3/MA0640.2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--BCTCTDCTTGGD
TTCCACTTCCTGGT
A C G T A C G T A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T
G A C T A G C T A G T C G A T C C G T A A G T C G A C T A C G T G A T C A G T C A C G T A T C G A T C G G C A T

PH0089.1_Isx/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-BCTCTDCTTGGD---
ACNNCTAATTAGNNNN
A C G T A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

NFYC/MA1644.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:BCTCTDCTTGGD-
--NCTGATTGGNN
A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

PH0107.1_Msx2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-BCTCTDCTTGGD----
ANCGCTAATTGGTCTNN
A C G T A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T A C G T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PH0033.1_Gbx1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-BCTCTDCTTGGD----
TNCACTAATTAGTNNNN
A C G T A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T A C G T A C G T A C G T
C G A T T G C A T G A C T G C A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A G C T A C T G T A C G G A T C C G T A

GABPA/MA0062.3/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-BCTCTDCTTGGD-
CCCACTTCCTGTTT
A C G T A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T
A G T C A G T C G A T C C T G A A G T C G C A T A C G T G A T C G T A C C A G T A T C G A G C T A G C T G A C T

PH0039.1_Mnx1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--BCTCTDCTTGGD--
NNNCACTAATTANTNN
A C G T A C G T A G C T A G T C A G C T A G T C C G A T C G A T G T A C A G C T A G C T C T A G A T C G C A G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C