Information for 11-GGCAACCCAT (Motif 34)

A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.397e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background133.4 +/- 50.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GGCAACCCAT----
NNNTCCATCCCATAANN
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCAACCCAT-
AGACCACCCASR
A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

RFX7/MA1554.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGCAACCCAT
NTAGCAACG---
A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCAACCCAT-
GGACCACCCACG
A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ZNF528/MA1597.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCAACCCAT---
CCCAGGGAAGCCATTTC
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCAACCCAT
ATCACCCCAT
A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

GLI3/MA1491.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCAACCCAT----
AGACCACCCACGTCG
A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A A C T G T G C A T G A C T G A C G T C A T A G C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

GLI2/MA0734.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCAACCCAT----
AGACCACCCACGTCG
A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCAACCCAT
ATCACCCCAT
A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

RFX1/MA0509.2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGCAACCCAT
TNCCATAGCAACNN--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C C G T A A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G A C G T A C G T