Information for 17-GGTCAGTACA (Motif 27)

C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
Reverse Opposite:
C A G T C T A G A C G T C G T A A T G C A C G T T C A G C G T A G A T C G T A C
p-value:1e-6
log p-value:-1.455e+01
Information Content per bp:1.864
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif51.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets93.4 +/- 49.3bp
Average Position of motif in Background98.0 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTCAGTACA---
TTATTAGTACATAN
A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

NR1H4/MA1110.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGTACA
NAGGTCATTGA-
A C G T A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGTACA
AGGTCA-----
A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTACA
CGAGGTCAC----
A C G T A C G T A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTACA
AGRGGTCA-----
A C G T A C G T A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAGTACA
NRBCARRGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTCAGTACA
RRTCAATA--
C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGTACA
GAGGTCAT----
A C G T A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGTCAGTACA---
NCTANGTCAGCAAATTT
A C G T A C G T A C G T A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGTACA
CAGGTAAGTAT-
A C G T A C G T C A T G C T A G A C G T A G T C C G T A A T C G C G A T T G C A A G T C G T C A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T