Information for 11-GATGGTACTC (Motif 21)

A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T C G T A A G T C A G T C C G T A A C G T A G T C
p-value:1e-3
log p-value:-8.106e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background86.0 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GATGGTACTC----
AGATGCTRCTRCCHT
A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATGGTACTC-----
TTCNAAGTACTTNNNNN
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GATGGTACTC-
GCTGTTACCCT
A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGGTACTC---
NAGATWNBNATCTNN
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

NEUROD1/MA1109.1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GATGGTACTC
GGACAGATGGCAG--
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GATGGTACTC
GGAACAGATGGCA---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GATGGTACTC
AACAGATGGT----
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GATGGTACTC------
TTNGGGTACGCCNNANN
A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GATGGTACTC
GGTTGGCAT--
A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GATGGTACTC----
ANANNTGATACCCNATN
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T