| p-value: | 1e-9 |
| log p-value: | -2.271e+01 |
| Information Content per bp: | 1.945 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 0.85% |
| Number of Background Sequences with motif | 20.9 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 123.7 +/- 59.6bp |
| Average Position of motif in Background | 68.7 +/- 55.8bp |
| Strand Bias (log2 ratio + to - strand density) | 2.2 |
| Multiplicity (# of sites on avg that occur together) | 1.10 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SOX2/MA0143.4/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCCATAGTAC NNCCATTGTNN |
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SOX13/MA1120.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCCATAGTAC NNCCATTGTNN |
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PB0152.1_Nkx3-1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCCATAGTAC------- TTCNAAGTACTTNNNNN |
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PB0194.1_Zbtb12_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCCATAGTAC--- TATCATTAGAACGCT |
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|
SOX9/MA0077.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCCATAGTAC -CCATTGTTC |
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|
|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCCATAGTAC NCCATTGTTC |
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|
|
HNF4G/MA0484.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCCATAGTAC--- TCCAAAGTCCAGA |
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|
|
HNF4A/MA0114.4/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCCATAGTAC--- TCCAAAGTCCAAA |
|
|
|
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCCATAGTAC- -CCATTGTTYB |
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|
|
Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCCATAGTAC--- -CCATTGTTYYBB |
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