Information for 1-CGTGTTGTCACA (Motif 1)

A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A
Reverse Opposite:
A C G T A T C G A C G T A C T G C G T A A G T C C G T A G T C A A G T C C G T A A T G C C T A G
p-value:1e-13
log p-value:-3.144e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.0 +/- 37.4bp
Average Position of motif in Background107.5 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.4/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CGTGTTGTCACA
TTATGATGTCATA
A C G T A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A
G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTTGTCACA-
GTNTTGTTGTGANNT
A C G T A C G T A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGTGTTGTCACA-
-ATGACGTCAYYN
A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A A C G T
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTGTTGTCACA-
-RTGACGTCAYCN
A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A A C G T
A C G T T C G A G A C T A C T G C G T A A G T C T C A G G A C T T G A C C T G A A G C T G A T C A T C G

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTTGTCACA---
TNNNNGGTGTCATNTNT
A C G T A C G T A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CGTGTTGTCACA
----NTGTCAN-
A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

CREM/MA0609.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGTGTTGTCACA--
NNNGTGACGTCACNNN
A C G T A C G T A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A A C G T A C G T
T A C G T G A C C T G A T C A G G A C T A T C G C T G A A G T C T C A G G A C T T A G C C T G A A G T C G A C T A C T G A T G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGTGTTGTCACA-
---VBTGWCAGCB
A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CGTGTTGTCACA
---CCTGTCAA-
A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

GATA5/MA0766.2/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGTGTTGTCACA
-NCCTTATCTG-
A G T C T A C G A C G T A C T G A C G T C G A T C T A G A C G T A G T C C G T A A T G C G T C A
A C G T A C G T A G T C T A G C G C A T C G A T C G T A A C G T A G T C C G A T T A C G A C G T