Information for 10-AGTCCCACGA (Motif 31)

C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A C T G A C T G A C T G C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.455e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background77.3 +/- 46.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGTCCCACGA-
-GTCACATGAY
C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A A C G T
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCCACGA----
NNAGTCCCACTCNNNN
A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTCCCACGA
HTTTCCCASG-
A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTCCCACGA
TTTCCCACAN
C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

RBPJ/MA1116.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTCCCACGA
NNTTCCCANN-
A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTCCCACGA---
-NHRTCACGACDN
C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T
A C G T T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTCCCACGA----
ATTTCCCAGVAKSCY
A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGTCCCACGA--
MCTCCCMCRCAB
C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTCCCACGA--------
GAAGTANCACGAATNMRAGT
A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

USF2/MA0526.3/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGTCCCACGA---
NNGTCACATGACNN
A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A