Information for 5-CGGTCCTC (Motif 39)

A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C T G C G T A A G T C A G T C A C T G
p-value:1e-2
log p-value:-5.733e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif50.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background83.1 +/- 106.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGGTCCTC--
CNGTCCTCCC
A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGGTCCTC
TWVGGTCCGC
A C G T A C G T A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

ZNF263/MA0528.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGTCCTC-----
-CCTCCTCCCCNN
A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A T G C A C G T T A G C T G A C C A G T T G A C T A G C A T G C G A T C T A G C A G T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGGTCCTC-----
CGAACAGTGCTCACTAT
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGGTCCTC----
GARTGGTCATCGCCC
A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGTCCTC---
-KGGCCYCWTD
A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T A C G T
A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGGTCCTC--
CAACGTCCGCGG
A C G T A C G T A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C A C G T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CGGTCCTC
NRRGGGTCTT-
A C G T A C G T A C G T A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGTCCTC-
-TGACCTYA
A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C A C G T
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGGTCCTC
AGGTCA--
A G T C A C T G A C T G A C G T A G T C A G T C A C G T A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T