Information for 4-CCCGTGCC (Motif 33)

T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C
Reverse Opposite:
C A T G C A T G G A T C T G C A G A T C A C T G A T C G A C T G
p-value:1e-5
log p-value:-1.177e+01
Information Content per bp:1.596
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif9.10%
Number of Background Sequences with motif2441.6
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets96.0 +/- 58.7bp
Average Position of motif in Background101.9 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES2/MA0616.2/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTGCC
GGCACGTGCC
A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C
T A C G T C A G A G T C C T G A A G T C C T A G A G C T A C T G G T A C T A G C

HES6/MA1493.1/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTGCC
AACACGTGCC
A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C
C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C

HEY1/MA0823.1/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--CCCGTGCC
GACACGTGCC
A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CCCGTGCC
GGCACGTGNC
A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

HES5/MA0821.1/Jaspar

Match Rank:5
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CCCGTGCC-
CGGCACGTGCCA
A C G T A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C A C G T
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:6
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCCGTGCC-
KCACGTGMCN
A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C A C G T
C A T G T G A C C G T A A G T C T A C G G C A T A C T G G T C A A T G C A G T C

BHLHE40/MA0464.2/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCCGTGCC
ATCACGTGAC
A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C

HES1/MA1099.2/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CCCGTGCC
GGCACGTGGC
A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C
A C T G C A T G G T A C C T G A A G T C C T A G G A C T C A T G A T C G A T G C

HES7/MA0822.1/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CCCGTGCC-
TGGCACGTGCCA
A C G T A C G T A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C A C G T
G A C T T C A G T C A G G A T C T C G A A G T C C T A G G A C T T C A G G A T C A G T C C T G A

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CCCGTGCC-
NCACGTGACN
A C G T T A G C T A G C T G A C C A T G A C G T C T A G G T A C G T A C A C G T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C