Information for 10-GAACGATGGG (Motif 15)

A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.289e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GAACGATGGG
GAACAATGGN
A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GAACGATGGG
GAACAATGG-
A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAACGATGGG
VRAACAATGG-
A C G T A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GAACGATGGG
VVRRAACAATGG-
A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T

SOX8/MA0868.2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAACGATGGG
AGAACAATGG-
A C G T A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T

SOX14/MA1562.1/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAACGATGGG
CCGAACAATG--
A C G T A C G T A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAACGATGGG-
AAACAATGGCA
A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAACGATGGG
RAACAATGGN
A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

SOX2/MA0143.4/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAACGATGGG-
AAACAATGGAA
A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAACGATGGG
AAAACAATGG-
A C G T A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C T G A C T G A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T