| p-value: | 1e-8 |
| log p-value: | -1.851e+01 |
| Information Content per bp: | 1.806 |
| Number of Target Sequences with motif | 52.0 |
| Percentage of Target Sequences with motif | 6.37% |
| Number of Background Sequences with motif | 1274.9 |
| Percentage of Background Sequences with motif | 2.63% |
| Average Position of motif in Targets | 107.8 +/- 50.4bp |
| Average Position of motif in Background | 101.1 +/- 58.2bp |
| Strand Bias (log2 ratio + to - strand density) | -0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.08 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GCTTAGGC GGATTAGC- |
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TFAP2A/MA0003.4/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GCTTAGGC-- ATTGCCTCAGGCCA |
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TFAP2C(var.2)/MA0814.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GCTTAGGC--- GGGCCTGAGGCGGG |
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TFAP2B(var.2)/MA0812.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GCTTAGGC- AGCCTCAGGCA |
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Crx/MA0467.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----GCTTAGGC AAGAGGATTAG-- |
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|
|
PITX3/MA0714.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCTTAGGC GGGATTANN- |
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|
|
EGR2/MA0472.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GCTTAGGC-- TGCGTGGGCGT |
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|
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BARHL1/MA0877.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCTTAGGC NCGTTTAN-- |
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|
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GSC2/MA0891.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GCTTAGGC GNGGATTAGN- |
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OTX1/MA0711.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCTTAGGC CGGATTAN-- |
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