Information for 14-GAGGTCCTGTCT (Motif 15)

A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A C T G A C T G C G T A A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-9.606e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGGTCCTGTCT
-ACTTCCTGTT-
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T
A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGGTCCTGTCT-------
--NNTNNTGTCTGGNNTNG
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAGGTCCTGTCT--
------CTGTCTGG
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGGTCCTGTCT--
NNGCACCTTTCTCC
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGTCCTGTCT--
AAGGTCATGACCTT
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
C T G A T C G A A C T G C A T G A G C T A G T C C T G A G A C T T C A G T G C A G T A C G A T C A G C T G A C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTCCTGTCT
AGGGAAGTCATTTCT
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

ETV1/MA0761.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTCCTGTCT
NNCACTTCCTGTNN
A C G T A C G T A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T
A G C T A G C T G A T C C T G A A G T C C G A T A C G T G T A C T G A C A C G T A T C G A G C T A G C T G A C T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGGTCCTGTCT--
GAGGTCATGACCTC
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGTCCTGTCT--
GAGGTCATGACCTC
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C G T
T C A G T C G A C A T G A C T G A C G T A G T C T C G A G A C T T C A G T G C A G T A C G A T C G A C T A G T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAGGTCCTGTCT
-ATTTCCTGTN-
A C T G C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C T G A C G T A G T C A C G T
A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T