Information for 18-GTTAACTATAGG (Motif 27)

A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G
Reverse Opposite:
G A T C A G T C A C G T C T G A A C G T C G T A A C T G A C G T A C G T C T G A C G T A A G T C
p-value:1e-5
log p-value:-1.312e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.9 +/- 54.5bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GTTAACTATAGG
CCTTAGTTAACTAAAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GTTAACTATAGG
ACTTAGTTAACTAAAAA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GTTAACTATAGG-
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTAACTATAGG
GTTAACTAGN--
A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTTAACTATAGG--
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTTAACTATAGG
NNNNCTGTTAACNNTNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTAACTATAGG---
GGGTTACTANAGGTCA
A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G A C G T A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

MYBL1/MA0776.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTAACTATAGG
ACCGTTAACGGT---
A C G T A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T A C G T A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTAACTATAGG---
TAGTGAACAATAGATTT
A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTTAACTATAGG---
NNGAGGTTACTNNAGGTCA
A C G T A C G T A C G T A C G T A C T G A C G T A G C T G T C A C G T A A G T C A C G T C G T A A G C T C G T A A C T G C A T G A C G T A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A