Information for 14-CAGCGGCTGCAC (Motif 13)

A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCTGCAC
CAGCAGCTGN--
A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCTGCAC---
CTCAGCAGCTGCTACTG
A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCGGCTGCAC
AGCAGCTGCTNN--
A C G T A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGCGGCTGCAC
SSRGCAGCTGCH-
A C G T A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGCGGCTGCAC
-AGCAGCTGCT-
A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

MYOG/MA0500.2/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCTGCAC
NNGCAGCTGCNN
A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCGGCTGCAC-
--GCGCCTGCGCA
A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C G T
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGCGGCTGCAC
-CGCAGCTGCG-
A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

ASCL1/MA1100.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGCGGCTGCAC
-GGCAGCTGCC-
A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
A C G T T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCGGCTGCAC
CAGCTGNT----
A G T C C G T A A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C C G T A A G T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T