Information for 20-TTATATATTAGG (Motif 23)

A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A C G T A A C G T C G T A A C G T C G T A A C G T C G T A C G T A
p-value:1e-3
log p-value:-8.522e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background123.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTATATATTAGG-
NANTTATATATAANGN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

ZKSCAN1/MA1585.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TTATATATTAGG--
----ATAGTAGGTG
A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

GATA1/MA0035.4/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTATATATTAGG-
--NNAGATTAGAN
A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G A C G T
A C G T A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TTATATATTAGG
NNNNNNCTTTTATAN----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTATATATTAGG
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTATATATTAGG
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TTATATATTAGG
NNNNNNCTTTTATAN----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTATATATTAGG--
NNTTTNTTTTNGNNN
A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

PH0038.1_Hlx/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTATATATTAGG-
TGTAATTAATTATGG
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G A C G T
C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTATATATTAGG
GGTTAAACATTAA-
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C T G A C T G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T