Information for 13-TAGGGCAAGGTT (Motif 19)

A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TAGGGCAAGGTT-
-AGGTCAAGGTCA
A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAGGGCAAGGTT-
-AGGTCAAGGTCA
A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGGGCAAGGTT--
TAGGGCAAAGGTCA
A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGGGCAAGGTT--
GTAGGGCAAAGGTCA
A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAGGGCAAGGTT---
ATGTAGGTCAAAGGTCAT
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G C A T T C A G A C G T T C G A C A T G C T A G A C G T A G T C C T G A C T G A C T G A T C A G C A T G A C G T A G T C C T G A A C G T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGGGCAAGGTT--
VNAGGKCAAAGGTCA
A C G T A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAGGGCAAGGTT--
TGGGGCAAAGGTCA
A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAGGGCAAGGTT
-AAGGCAAGTGT
A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

KLF3/MA1516.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGGGCAAGGTT
-NGGGCGTGGTC
A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T
A C G T C G A T C T A G A C T G A C T G G A T C C A T G A G C T C T A G A T C G A G C T G A T C

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TAGGGCAAGGTT--
---GTCAAGGTCAC
A C G T C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C