Information for 2-AGTTTCCATA (Motif 3)

C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C G T
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif54.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets106.3 +/- 68.9bp
Average Position of motif in Background103.0 +/- 90.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC4/MA1525.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AGTTTCCATA
ATTTTCCATN
C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A
C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGTTTCCATA
ATTTTCCATT
C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGTTTCCATA
ATTTTCCATT
C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AGTTTCCATA
ATTTTCCATT
C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGTTTCCATA
ATTTTCCATT
C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTCCATA--
TNTGGTTTCGATACN
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCCATA---
CAGTTTCGNTTCTN
A C G T C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGTTTCCATA--
AATTTGCATANT
C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGTTTCCATA
-TTTTCCA--
C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCCATA-
TAATTTGCATAA
A C G T C G T A A C T G A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A