Information for 21-GCATAAGTGAGA (Motif 28)

A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.102e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background42.9 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCATAAGTGAGA-
TATCATAATTAAGGA
A C G T A C G T A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCATAAGTGAGA--
----AGGTGTGAAM
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCATAAGTGAGA
--TTAAGTGGT-
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCATAAGTGAGA
--TTAAGTGC--
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCATAAGTGAGA-
-CGGAAGTGAAAC
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C G T
A C G T T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCATAAGTGAGA--
-NTTAAGTGGTTNN
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C G T A C G T
A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GCATAAGTGAGA
AAAATATGCATAATAAA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCATAAGTGAGA--
--GAAAGTGAAAGT
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCATAAGTGAGA--
----AGGTGTGAAA
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCATAAGTGAGA
----AGGTGTGA
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A