Information for 25-CACATATATATA (Motif 41)

A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C T G
p-value:1e-2
log p-value:-6.259e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background91.6 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CACATATATATA----
NANTTATATATAANGN
A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CACATATATATA----
ANNNGGATATATCCNNN
A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CACATATATATA--
NNTATANATATACN
A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACATATATATA-
YATGCATATRCATRT
A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CACATATATATA
ANTNTTACATGTATNTA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACATATATATA-
NNNNNNCTTTTATAN
A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACATATATATA-
NNNNNNCTTTTATAN
A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CACATATATATA
ANTTNTACATGTANTTN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CACATATATATA
ANTNNTACATGTANNTN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CACATATATATA
NNTATTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C G T A
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T