Information for 8-GTCTTCATTCTC (Motif 13)

A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A A C G T A C T G C G T A C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-9.666e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background124.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCTTCATTCTC--
---TTCTTTCTCTT
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTCTTCATTCTC
--TTTCATTRCC
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C
A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCTTCATTCTC
---CTCATTGTC
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCTTCATTCTC------
---AGTATTCTCGGTTGC
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

POL002.1_INR/Jaspar

Match Rank:5
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTCTTCATTCTC
----TCAGTCTT
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

MAFF/MA0495.3/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCTTCATTCTC--
AAGTCAGCATTTTTTT
A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T
C T G A C G T A T A C G C G A T G T A C C G T A C A T G A G T C C G T A C G A T G C A T G C A T G C A T G C A T G C A T G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTCTTCATTCTC
-GCTTCC-----
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCTTCATTCTC---
NNCATTCATTCATNNN
A C G T A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTCTTCATTCTC------
---NNAATTCTCGNTNAN
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTCTTCATTCTC
--TTTCATKGCC
A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C
A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C