Information for 2-SGGGTTTC (Motif 28)

A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C
Reverse Opposite:
A C T G G T C A C G T A C G T A A G T C G T A C A G T C A T C G
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.818
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.37%
Number of Background Sequences with motif945.5
Percentage of Background Sequences with motif1.93%
Average Position of motif in Targets104.9 +/- 52.5bp
Average Position of motif in Background99.1 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:SGGGTTTC---
-TGGTTTCAGT
A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T A C G T A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-SGGGTTTC-
GGGGATTTCC
A C G T A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-SGGGTTTC------
TNTGGTTTCGATACN
A C G T A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-SGGGTTTC-
GGGAATTTCC
A C G T A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MZF1/MA0056.2/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----SGGGTTTC-
NNNTGGGGATTNN
A C G T A C G T A C G T A C G T A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:SGGGTTTC-------
NTGGTTTCGGTTNNN
A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-SGGGTTTC-
GGGGATTTCC
A C G T A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---SGGGTTTC------
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:SGGGTTTC
NGGGATTA
A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:SGGGTTTC----
GGGGATTCCCCC
A T G C A C T G C A T G A C T G C G A T A C G T A C G T G T A C A C G T A C G T A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C