Information for 5-AAGTGGTA (Motif 32)

C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C C G T A A G T C A C G T A C G T
p-value:1e-1
log p-value:-3.044e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif835.8
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets81.0 +/- 46.0bp
Average Position of motif in Background102.3 +/- 98.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)10.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGGTA
TTAAGTGGT-
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGTA
NTCAAGTGGN-
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGTA--
NTTAAGTGGTTNN
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AAGTGGTA
TTRAGTGSYK
A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGTA
NTCAAGTGG--
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:6
Score:0.74
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGTA---
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGTA---
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGGTA
CTYRAGTGSY-
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------AAGTGGTA--
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGGTA--
AAATTCAAGTGGNTTN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A