Information for 4-TATATTCGGC (Motif 8)

A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G C G T A C G T A A C G T C G T A A C G T C G T A
p-value:1e-4
log p-value:-9.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0186.1_Tcf3_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TATATTCGGC-
NNTTTNTTTTNGNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TATATTCGGC
GCTATTTTTGGM
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TATATTCGGC-
ATGGGATATATCCGCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATATTCGGC
CTATTTTTGG-
A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATATTCGGC
GCTATTTTTAGC
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATATTCGGC-
TACATCCGGGT
A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TATATTCGGC
KCTATTTTTRGH
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TATATTCGGC
CCATATATGG-
A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TATATTCGGC--
TTCTATTTTTAGNNN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TATATTCGGC
TTTTATKRGG-
A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C T G A C T G A G T C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T