Information for 4-TGCCGAGGGT (Motif 6)

A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A G T C A C T G A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.828e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGAGGGT
NNTGCCAAGNN-
A C G T A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCCGAGGGT
TGCCCAGNHW
A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCCGAGGGT
GGTGCCAAGT--
A C G T A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCCGAGGGT-
CTTCGCGGGGGGTC
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

EBF1/MA0154.4/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGCCGAGGGT---
AGTCCCCAGGGGACT
A C G T A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

EBF3/MA1637.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCGAGGGT--
TTCCCAAGGGAAT
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGAGGGT---
ANTGCCTGAGGCAAN
A C G T A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCCGAGGGT---
NNNACCGAGAGTNNN
A C G T A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCGAGGGT--
TTCCCAAGGGACT
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGCCGAGGGT
TTGCCAAG---
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C T G A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T