Information for 6-CTTTAATC (Motif 19)

A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C G T A C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.335e+01
Information Content per bp:1.530
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif292.7
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets112.2 +/- 48.1bp
Average Position of motif in Background98.5 +/- 52.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CTTTAATC
-TTTAAT-
A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CTTTAATC--
--TTAATCCG
A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----CTTTAATC----
AATCCCTTTGATCTATC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CTTTAATC--
--YTAATCCY
A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CTTTAATC----
ATTTCCTTTGATCTATA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CTTTAATC---
-NYTAATCCYB
A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTTTAATC---
-CCTAATCCGC
A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTAATC----
NNTTCCTTTGATCTANA
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---CTTTAATC---
TNCCTTTGATCTTN
A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----CTTTAATC---
AACCCTTTGATCTTT
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T