Information for 5-CCTKACAACCTG (Motif 6)

A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G
Reverse Opposite:
G A T C C G T A C T A G T C A G A G C T C G A T T A C G A C G T G T C A C G T A C T A G T C A G
p-value:1e-4
log p-value:-1.017e+01
Information Content per bp:1.680
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif1631.9
Percentage of Background Sequences with motif1.90%
Average Position of motif in Targets117.2 +/- 59.2bp
Average Position of motif in Background100.5 +/- 76.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTKACAACCTG
NNCNNAACAATTNT
A C G T A C G T A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTKACAACCTG---
TNCNNAACAATTTTTNC
A C G T A C G T A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Smad4/MA1153.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCTKACAACCTG
TCTAGACA-----
A C G T A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCTKACAACCTG
-TTGACAG----
A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCTKACAACCTG
TATCATTAGAACGCT
A C G T A C G T A C G T A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCTKACAACCTG
-TTGACAGC---
A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CCTKACAACCTG----
----NAAACCTGTTTN
A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

Prdm15/MA1616.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTKACAACCTG----
-AGGAAAACCTGGAGC
A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G A C G T A C G T A C G T A C G T
A C G T C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCTKACAACCTG
CCAGACAG----
A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCTKACAACCTG--
TCNCTTTACAGCGNNNT
A C G T A C G T A C G T A G T C A G T C G C A T C A G T C G T A A G T C C G T A C T G A A G T C A G T C A C G T C A T G A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T