Information for 1-GCCWGAGACMGT (Motif 1)

A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A C T G A C G T A G T C A G C T A G T C C G T A A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.915
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets71.0 +/- 33.4bp
Average Position of motif in Background105.8 +/- 73.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCCWGAGACMGT
NNGCCTGAGGCANN
A C G T A C G T A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCCWGAGACMGT
GGGCCTGAGGCGGG
A C G T A C G T A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCWGAGACMGT
AGCCTCAGGCA--
A C G T A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCWGAGACMGT
ATTGCCTCAGGCAAT
A C G T A C G T A C G T A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCWGAGACMGT-
--NAGAAACAGNN
A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T A C G T
A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCWGAGACMGT
NTNGCCTCAGGCNNN
A C G T A C G T A C G T A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

TFAP2E/MA1569.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCWGAGACMGT
NGCCTGAGGCN--
A C G T A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCWGAGACMGT
SCCTSAGGSCAW
A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PRDM1/MA0508.3/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCCWGAGACMGT-
--NAGAGAAAGNA
A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T A C G T
A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GCCWGAGACMGT
NNNNTGCCAGTGATTG-
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G A T A C T G C T G A A C T G C G T A A G T C G T C A A T C G A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T