Information for 13-TTGACATCGC (Motif 35)

A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G C G T A A C G T A C T G A C G T A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.853e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background43.3 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTGACATCGC
TTGACAGG--
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T

CREB1/MA0018.4/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TTGACATCGC--
NATGACATCANNN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTGACATCGC
YTGWCADY--
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTGACATCGC
TTGACAG---
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTGACATCGC
TTGACAGC--
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGACATCGC
ARNTGACA----
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGACATCGC---
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGACATCGC
VBTGWCAGCB-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTGACATCGC---
ATAAATGACACCTATCA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGACATCGC---
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T