Information for 13-GTCAATCTGT (Motif 23)

A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A G T C
p-value:1e-9
log p-value:-2.202e+01
Information Content per bp:1.530
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.7 +/- 37.8bp
Average Position of motif in Background110.1 +/- 55.0bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCAATCTGT--
NNNCCATCTGTNN
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTCAATCTGT---
NNCCATCTGTNNN
A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTCAATCTGT
RRTCAATA---
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTCAATCTGT-
-RCCATMTGTT
A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T A C G T
A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTCAATCTGT-
-ACCATCTGTT
A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T A C G T
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTCAATCTGT
SCTGTCAVTCAV-
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCAATCTGT
NCTGTCAATCAN-
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCAATCTGT-
-GCCATCTGTT
A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T A C G T
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCAATCTGT--
GAAGATCAATCACTAA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PKNOX1/MA0782.2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAATCTGT
NNGCTGTCACTCANN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A