Information for 13-CTCATATGAG (Motif 32)

A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.124e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets98.5 +/- 0.5bp
Average Position of motif in Background110.6 +/- 78.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCATATGAG
ACCATATGTT
A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCATATGAG
-CCATATGT-
A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

TFAP4(var.2)/MA1570.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCATATGAG
AACATATGTT
A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
T C G A G T C A A G T C C T G A A G C T T C G A A C G T A T C G C A G T A G C T

USF2/MA0526.3/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCATATGAG--
NNGTCACATGACNN
A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

MITF/MA0620.3/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTCATATGAG----
NNNNGTCACGTGACNNNN
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A T C A G A G C T T A G C G C T A A G T C T C A G C G A T A T C G T C G A A G T C G A C T G C A T G C A T C G T A

USF1/MA0093.3/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCATATGAG--
TGGTCATGTGACCT
A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G A C G T A C G T
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCATATGAG
AACATATGTT
A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCATATGAG
RTCATGTGAC
A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

NEUROG1/MA0623.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCATATGAG
GACATATGTC
A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCATATGAG
BRGTCACGTGAC
A C G T A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C G T A C T G C G T A A C T G
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C