Information for 18-AGACACGTGT (Motif 35)

C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A G T C A C G T
p-value:1e-2
log p-value:-6.196e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.5 +/- 44.0bp
Average Position of motif in Background112.0 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:AGACACGTGT-
-AACACGTGTT
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T

HEY2/MA0649.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:forward strand
Alignment:AGACACGTGT-
-GACACGTGCC
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.83
Offset:1
Orientation:forward strand
Alignment:AGACACGTGT
-GCCACGTGT
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

HEY1/MA0823.1/Jaspar

Match Rank:4
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AGACACGTGT-
-GGCACGTGTC
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.82
Offset:1
Orientation:forward strand
Alignment:AGACACGTGT
-GHCACGTG-
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T

HES6/MA1493.1/Jaspar

Match Rank:6
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AGACACGTGT-
-GGCACGTGTT
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AGACACGTGT
-GNCACGTG-
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.80
Offset:3
Orientation:reverse strand
Alignment:AGACACGTGT---
---CACGTGTGCH
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AGACACGTGT-
-NACACGTGCN
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGACACGTGT
-NVCACGTG-
C G T A A C T G C G T A A G T C C G T A A G T C A C T G A C G T A C T G A C G T
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T