Information for 1-TGTTTGGACTAA (Motif 1)

A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
Reverse Opposite:
A C G T A C G T C T G A A T C G A C G T A G T C A G T C C G T A C G T A C G T A A T G C C G T A
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.802
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif70.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets102.7 +/- 64.3bp
Average Position of motif in Background92.2 +/- 84.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGACTAA
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTTGGACTAA
NNTTTTGTTTTGATNT-
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGGACTAA
NCTGATTGGNN---
A C G T A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TGTTTGGACTAA
NNGTANTGTTTTNC----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGGACTAA
CBTGTTTAYAWW--
A C G T A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTGGACTAA
NTGTTTAYATWW-
A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T

SOX12/MA1561.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTGGACTAA
NATTGTTCGGT----
A C G T A C G T A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T A C G T A C G T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGGACTAA
NCTGATTGGNN---
A C G T A C G T A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTTTGGACTAA
TGTTTAC-----
A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGTTTGGACTAA
TGTCTAGA----
A C G T A T C G A C G T A C G T C G A T C T A G A C T G T G C A A T G C A G C T G T C A C G T A
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T