Information for 4-AAATGGATATAG (Motif 4)

C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 28.7bp
Average Position of motif in Background172.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAATGGATATAG-----
ANNNGGATATATCCNNN
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAATGGATATAG
AAAAAATCGATAAT-
A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AAATGGATATAG-
--AAGGATATNTN
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AAATGGATATAG
--ATGMATATDC
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAATGGATATAG
AAAAAATCAATAAT-
A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAATGGATATAG
--ATGAATATTC
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAATGGATATAG
-AATGGAAAAT-
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAATGGATATAG
TAATCGATAA--
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAATGGATATAG
ATATGCAAATT-
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAATGGATATAG-
ATATGCAAATNNN
C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C T G A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A