Information for 1-AGCCTATAAT (Motif 6)

G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T
Reverse Opposite:
C T G A A C G T G A C T T C G A G A C T T C G A T C A G C A T G A G T C C G A T
p-value:1e-11
log p-value:-2.541e+01
Information Content per bp:1.532
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif131.6
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets103.7 +/- 53.7bp
Average Position of motif in Background108.6 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF410/MA0752.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCCTATAAT----
TCCATCCCATAATACTC
A C G T A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T A C G T A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTATAAT
BCAGACWA----
A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCCTATAAT--
GTCAACCAAGAATTC
A C G T A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCCTATAAT----
TAAGATTATAATACGG
A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T A C G T A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCCTATAAT
ACTAGCCAATCA-
A C G T A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCTATAAT
CAGCC------
A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCCTATAAT----
NANTATTATAATTNNN
A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AGCCTATAAT-
NNNTCCATCCCATAANN
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AGCCTATAAT
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PH0080.1_Hoxd8/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCCTATAAT------
NAGCCATTAATTANTTA
A C G T G C T A T C A G G T A C A G T C A G C T C T G A A G C T C T G A T G C A G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A