Information for 6-GATGGAGAGAGT (Motif 4)

A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
Reverse Opposite:
C G T A A T G C C G A T G A T C G A C T G T A C C G A T G A T C A G T C C G T A C G A T G T A C
p-value:1e-11
log p-value:-2.722e+01
Information Content per bp:1.725
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif136.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets102.1 +/- 49.9bp
Average Position of motif in Background97.2 +/- 65.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GATGGAGAGAGT
AATGGAAAAT--
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GATGGAGAGAGT-
--NAGAGAAAGNA
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T A C G T
A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATGGAGAGAGT
-ATGGGGTGAT-
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATGGAGAGAGT-------
NANTGGAAAAANTGAGTCAN
A C G T A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GATGGAGAGAGT
GAAAGTGAAAGT
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

NFATC4/MA1525.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GATGGAGAGAGT
AATGGAAAAT--
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GATGGAGAGAGT
AATGGAAAAT--
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GATGGAGAGAGT
TGATKGATGR---
A C G T A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GATGGAGAGAGT
NNTGGAAANN--
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GATGGAGAGAGT
NATGGAAAAN--
A C T G G C T A C G A T C T A G C T A G C G T A C A T G C T G A C A T G G C T A A T C G C G A T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T