Information for 18-GTAGAGTGCC (Motif 26)

A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A G T C C G A T A G T C A C G T C G T A A G T C
p-value:1e-4
log p-value:-1.145e+01
Information Content per bp:1.957
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets71.3 +/- 52.0bp
Average Position of motif in Background133.3 +/- 54.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTAGAGTGCC
BTBRAGTGSN
A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTAGAGTGCC---
NNNNTTGTGTGCTTNN
A C G T A C G T A C G T A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

NKX2-5/MA0063.2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAGAGTGCC
NNTTGAGTGNN
A C G T A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTAGAGTGCC-
CTTGAGTGGCT
A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTAGAGTGCC
CTYRAGTGSY
A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTAGAGTGCC-
-TTGAGTGSTT
A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTAGAGTGCC-
-TTRAGTGSYK
A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTAGAGTGCC----
-----ATGCCCACC
A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0147.1_Max_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTAGAGTGCC--
NNGTCGCGTGNCAC
A C G T A C G T A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTAGAGTGCC-------
-GGGTGTGCCCAAAAGG
A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G