Information for 25-AGCGGGGAGC (Motif 44)

C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T
p-value:1e-2
log p-value:-6.900e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background99.7 +/- 85.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AGCGGGGAGC
----CGGAGC
C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

TFDP1/MA1122.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGCGGGGAGC
GGGCGGGAAGG
A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C
T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGGAGC-
DCHCAGCAGGRGGCC
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGCGGGGAGC-
CACAGCGGGGGGTC
A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGGAGC-
NCGCAGCGGGGGGTC
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGCGGGGAGC
CHCAGCRGGRGG-
A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C
T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGGAGC-
NCNCAGCGGGGGGTC
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC5/MA1584.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGCGGGGAGC--
GCNCAGCGGGGGGTCN
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T
C A T G T G A C C T G A A G T C T C G A T C A G G A T C C T A G A C T G C A T G A C T G A C T G C A T G A G C T T G A C A C T G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCGGGGAGC
GGCGGGAARN
C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F6/MA0471.2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCGGGGAGC
GGGGGCGGGAAGG
A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C T G A C T G A C T G C G T A A C T G A G T C
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G