| p-value: | 1e-3 |
| log p-value: | -7.997e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 5.3 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 117.0 +/- 0.0bp |
| Average Position of motif in Background | 107.8 +/- 39.8bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGGTAGTCAA CGTGGGTGGTCC- |
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Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGGTAGTCAA YSTGGGTGGTCT- |
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PH0067.1_Hoxc12/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGGTAGTCAA----- TTAGGTCGTAAAATTTC |
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Nr2e1/MA0676.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAGTCAA -AAAAGTCAA |
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PH0168.1_Hnf1b/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGGTAGTCAA----- ANNNCTAGTTAACNGNN |
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|
|
HOXC12/MA0906.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAGTCAA-- -GGTCGTAAAAA |
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|
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PH0012.1_Cdx1/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGGTAGTCAA---- TAAGGTAATAAAATTA |
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HOXC11/MA0651.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAGTCAA-- -GGTCGTAAAAT |
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|
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FOXN3/MA1489.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGGTAGTCAA --GTAAACAA |
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Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAGTCAA- -GGYAATGAAA |
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