Information for 5-TDGTHTGBACTC (Motif 6)

A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T T A G C A G T C C G T A C A T G C T G A A T G C G C T A C G T A
p-value:1e-4
log p-value:-1.141e+01
Information Content per bp:1.748
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif142.5
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets139.3 +/- 62.2bp
Average Position of motif in Background99.1 +/- 81.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TDGTHTGBACTC--
----GTACACTCAC
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TDGTHTGBACTC--
----MRSCACTYAA
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

VDR/MA0693.2/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TDGTHTGBACTC-
-----TGAACTCA
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TDGTHTGBACTC-------
--TACGAGACTCCTCTAAC
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TDGTHTGBACTC---
-----RSCACTYRAG
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TDGTHTGBACTC-----
TTCNAAGTACTTNNNNN
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TDGTHTGBACTC--
----AAGCACTTAA
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TDGTHTGBACTC--
----AASCACTCAA
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TDGTHTGBACTC----
-----ACCACTCAAAA
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TDGTHTGBACTC---
----AGCCACTCAAG
A C G T C A G T A T C G A G C T G A T C C G A T C T A G A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G