Information for 2-GACGTGCG (Motif 23)

A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C T G A A G T C A C T G C G A T A T G C
p-value:1e-6
log p-value:-1.603e+01
Information Content per bp:1.909
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif39.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets93.0 +/- 34.2bp
Average Position of motif in Background80.3 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCG-
GTACGTGCCC
A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G A C G T
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCG
GGACGTGC-
A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GACGTGCG
TACGTGCV
A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GACGTGCG
RTACGTGC-
A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGCG
GGGTACGTGC-
A C G T A C G T A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

SOHLH2/MA1560.1/Jaspar

Match Rank:6
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GACGTGCG
CGCACGTGCA
A C G T A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGCG
ACACGTGC-
A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGCG
NGKCACGTGM-
A C G T A C G T A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GACGTGCG
CACGTG--
A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:10
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGCG
NGKCACGTGM-
A C G T A C G T A C G T A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G
T C A G T A C G C A G T T G A C C G T A A G T C T C A G G C A T A C T G G T A C A C G T