Information for 2-AGAAACGTAT (Motif 10)

C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C T G A C G T A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.407e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGAAACGTAT--
AGAAACGAAAGT
C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGAAACGTAT
NTAGCAACG---
A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGAAACGTAT----
--AAACATATGTTT
C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PRDM4/MA1647.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAAACGTAT
NAGAAACAGNN
A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AGAAACGTAT
CCGCATAGCAACGGA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGAAACGTAT---
---AACATATGTT
C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AGAAACGTAT
CAAAATCGAAACTAA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAAACGTAT--
GGAGAAAGGTGCGA
A C G T A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGAAACGTAT-----
AAAAACGGATTATTG
C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGAAACGTAT------
TNNTTTCGTATTNNANN
A C G T C G T A A C T G C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G