Information for 19-GGGGATTTTTAA (Motif 27)

A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C G T A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-8.430e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.0 +/- 0.0bp
Average Position of motif in Background125.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----GGGGATTTTTAA
NNNTGGGGATTNN---
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGGATTTTTAA
NNGGGGAATNC---
A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTTTAA--
AGAGGGGATTAATTTAT
A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTTTTAA-
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTTTAA--
TGAAGGGATTAATCATC
A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTTTTAA-
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGGGATTTTTAA-
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGGATTTTTAA--
TGTAGGGATTAATTGTC
A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGGATTTTTAA
NGGGGATTTCCC-
A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

PITX2/MA1547.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGGATTTTTAA
-GGGATTAN---
A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T C G T A C G T A
A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T