Information for 8-AAGTCAAGAGTG (Motif 9)

C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGTCAAGAGTG
AAAAGTCAA-----
A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

PAX6/MA0069.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGTCAAGAGTG--
AANTCATGCGTGAA
C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGTCAAGAGTG
CAAAGGTCAAGGG--
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTCAAGAGTG---
NGCANTCATGCGTGACG
A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGTCAAGAGTG
AAGGCAAGTGT-
C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGTCAAGAGTG---
TGCAGTCATGCGTGACG
A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGTCAAGAGTG
NCWRWGTAAACANSV
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCAAGAGTG
WAAGTAAAYA---
A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAAGAGTG
AAAGTAAACA---
A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGTCAAGAGTG
AAAGTAAACA---
A C G T C G T A C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T