| p-value: | 1e-3 |
| log p-value: | -8.802e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 1.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 176.0 +/- 0.0bp |
| Average Position of motif in Background | 139.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0135.1_Hoxa3_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AATGGCTTTTTG CCTTAATNGNTTTT-- |
|
|
|
PH0006.1_Barhl2/Jaspar
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----AATGGCTTTTTG NNNTTAATTGGTTTTT- |
|
|
|
BARX2/MA1471.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGGCTTTTTG NTAATGGTTTTN-- |
|
|
|
Nr2e1/MA0676.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATGGCTTTTTG -TTGACTTTT-- |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AATGGCTTTTTG GTTAATGGCC----- |
|
|
|
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGGCTTTTTG NTAATKGTTT---- |
|
|
|
Isl1/MA1608.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AATGGCTTTTTG NNCTAATGGNN----- |
|
|
|
ONECUT3/MA0757.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGGCTTTTTG NTTATTGATTTTTT |
|
|
|
PH0005.1_Barhl1/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----AATGGCTTTTTG GNNTTAATTGGTTGTT- |
|
|
|
ONECUT2/MA0756.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGGCTTTTTG ATTATCGATTTTTT |
|
|
|