Information for 21-TGAGGCAGACTA (Motif 24)

A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A G T C A C G T A C T G A G T C A G T C A C G T A G T C C G T A
p-value:1e-4
log p-value:-9.538e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background100.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGAGGCAGACTA
----BCAGACWA
A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGAGGCAGACTA
AGGTGHCAGACA-
A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

BATF3/MA0835.2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGCAGACTA
NATGAGTCATN---
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A A C G T A C G T A C G T

BATF::JUN/MA0462.2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGCAGACTA
NATGAGTCATN---
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A A C G T A C G T A C G T

BATF/MA1634.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGCAGACTA
NATGAGTCATN---
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGAGGCAGACTA--
----CCAGACRSVB
A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

TFAP2A/MA0003.4/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGGCAGACTA
NNGCCTGAGGCANN---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T A C G T A C G T

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGCAGACTA
NNATGAGTCATNNN-
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGAGGCAGACTA----
CGAAGCACACAAAATA
A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGAGGCAGACTA
NATGASTCABNN--
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A G T C C G T A A C T G C G T A A G T C A C G T C G T A
C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C A C G T A C G T