Information for 7-AVTGCMKH (Motif 26)

C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T
Reverse Opposite:
C G T A G T A C A C T G C A T G A T G C C G T A A T G C C G A T
p-value:1e-4
log p-value:-9.977e+00
Information Content per bp:1.567
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.74%
Number of Background Sequences with motif1122.0
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets104.9 +/- 52.5bp
Average Position of motif in Background100.8 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AVTGCMKH
NNNANTGA---
A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AVTGCMKH
TTRAGTGSYK-
A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------AVTGCMKH---
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AVTGCMKH
BTBRAGTGSN--
A C G T A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AVTGCMKH-
CGACCAACTGCCGTG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AVTGCMKH
TTGAGTGSTT-
A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AVTGCMKH-
NANTGCSGCA
A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T A C G T
G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AVTGCMKH
TTAAGTGC---
A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AVTGCMKH--
CGACCAACTGCCATGC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AVTGCMKH
CTYRAGTGSY--
A C G T A C G T A C G T A C G T C G T A T A C G C G A T A T C G G T A C T G A C C A T G G C A T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T