Information for 6-TTGCAAACCG (Motif 27)

A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C C G T A C G T A
p-value:1e-3
log p-value:-8.780e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background66.4 +/- 86.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGCAAACCG
TTTGAAACCG
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0046.1_Mybl1_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTGCAAACCG-------
TTGAAAACCGTTAATTT
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGCAAACCG---
ACTATGCCAACCTACC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTGCAAACCG
NATGTTGCAA----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTGCAAACCG---
---NHAACBGYYV
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTGCAAACCG---
NNTTTGCACACGGCCC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGCAAACCG-------
ATGGAAACCGTTATTTT
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

POU5F1/MA1115.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTGCAAACCG
ATATGCAAATT-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TTGCAAACCG---
-----AACCGANA
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAAACCG
TATGCAAATC-
A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C A C G T