Information for 9-CGTGCGTTGGGA (Motif 12)

A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A A G T C A C T G
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets142.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ebf2/MA1604.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGTGCGTTGGGA-
NNTCCCTTGGGAN
A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A A C G T
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

EBF3/MA1637.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTGCGTTGGGA-
NNTCCCTTGGGAN
A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A A C G T
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

ZNF282/MA1154.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGTGCGTTGGGA---
NTCGTGTTGTGGGAAAG
A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
T A C G G A C T G T A C T A C G C A G T T A C G C G A T G C A T C T A G C A G T T A C G C T A G A T C G G C T A G C T A C G T A T A C G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGTGCGTTGGGA
RTACGTGC-------
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGTGCGTTGGGA
GTACGTGCCC-----
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C A C G T A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGTGCGTTGGGA
GGACGTGC-------
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB14/MA1650.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGTGCGTTGGGA
GNGTGCGCGGGN-
A C G T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A
T A C G A T C G T A C G A C G T A T C G A T G C T A C G A T G C T A C G A T C G T A C G A T C G A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGTGCGTTGGGA
TACGTGCV------
A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGTGCGTTGGGA-
----GGTTGGCAT
A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGTGCGTTGGGA---
-----CCTGGGAAAG
A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G