Information for 22-AGGCTGCCAGAA (Motif 23)

C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C T G A C T G A G T C C G T A A C T G A G T C A G T C A C G T
p-value:1e-5
log p-value:-1.155e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets178.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGGCTGCCAGAA-
---ATGCCAGACN
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGCTGCCAGAA
-VGCTGGCA---
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A
A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGGCTGCCAGAA
TGGCAGNCTGCCAG--
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGCTGCCAGAA
---TTGCCAAG-
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGCTGCCAGAA
---CTGCCCGCA
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGGCTGCCAGAA
--CGTGCCAAG-
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGCTGCCAGAA-----
--TACTCCAGAAAAGAT
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGCTGCCAGAA
-VGCTGWCAVB-
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGCTGCCAGAA-
-AGGTGHCAGACA
C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGCTGCCAGAA-
NGTAGGTTGGCATNNN
A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C T G A G T C A G T C C G T A A C T G C G T A C G T A A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T