Information for 8-AGTTCCAACT (Motif 18)

C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T
Reverse Opposite:
C G T A C T A G A C G T A C G T A C T G A T C G C T G A G T C A A G T C C G A T
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.786
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif262.8
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets105.8 +/- 65.6bp
Average Position of motif in Background98.3 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGTTCCAACT
CAAAGKTCAA---
A C G T A C G T A C G T C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCCAACT
AAAGTTCAT---
A C G T A C G T C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGTTCCAACT
TGAGTTCA----
A C G T A C G T C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGTTCCAACT---
---ACCAACTGTC
C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTTCCAACT
NATTCAAAT-
C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCCAACT---
AGNGTTCTAATGANN
A C G T A C G T C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGTTCCAACT------
-CGACCAACTGCCGTG
C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTTCCAACT
GGTGCCAAGT
C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGTTCCAACT
-ATGCCAACC
C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGTTCCAACT-------
-CGACCAACTGCCATGC
C G T A A C T G C A G T G A C T A T G C G T A C G T C A C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C