Information for 22-CTGACCCAGTGT (Motif 32)

A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C G T A C T G C T A G A C T G A C G T A G T C C G T A A C T G
p-value:1e-2
log p-value:-6.649e+00
Information Content per bp:1.972
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.7 +/- 53.3bp
Average Position of motif in Background138.1 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGACCCAGTGT-----
-TGACCCAGTGACCTAC
A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGACCCAGTGT
BTGACCTAVTTW
A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCCAGTGT
NNHYTGACCTAGWTT
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCCAGTGT-
NNNNTGACCCGGCGCG
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGACCCAGTGT--
TTGACCTANTTATN
A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGACCCAGTGT
-TGACCTARTT-
A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTGACCCAGTGT
-TGACCTARTT-
A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

MAFK/MA0496.3/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTGACCCAGTGT-
TGCTGACTCAGCAAT
A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T
G C A T T A C G T G A C G C A T A C T G T G C A A T G C G C A T G T A C C G T A A C T G T A G C G T C A G C T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTGACCCAGTGT
-TGACCT-----
A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

NR1D1/MA1531.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGACCCAGTGT---
NTGACCTACTGACCC
A G T C A C G T A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C