Information for 3-TCCAAGTTAACT (Motif 3)

C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T
Reverse Opposite:
C G T A A C T G A C G T C G A T G T C A C G T A A G T C G A C T C G A T T C A G A T C G C G T A
p-value:1e-6
log p-value:-1.392e+01
Information Content per bp:1.654
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif721.3
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets115.4 +/- 58.2bp
Average Position of motif in Background96.8 +/- 82.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0167.1_Tcf1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TCCAAGTTAACT-----
CCTTAGTTAACTAAAAT
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TCCAAGTTAACT-----
ACTTAGTTAACTAAAAA
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T A C G T A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TCCAAGTTAACT------
-AGCTGTTAACTAGCCGT
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:TCCAAGTTAACT---
-----GTTAACTAGN
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:TCCAAGTTAACT
----TGTTTACH
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCCAAGTTAACT--
--CNTGTTTACATA
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T A C G T
A C G T A C G T A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXA3/MA1683.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCCAAGTTAACT-
--NNTGTTTACNN
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T
A C G T A C G T G C A T G C T A C G A T T C A G C G A T C A G T C A G T C T G A G A T C G C T A G A C T

FOXA1/MA0148.4/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCCAAGTTAACT-
-NNATGTTTACAT
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T
A C G T G C T A G T A C G C T A C G A T C T A G G C A T C A G T A C G T C T G A G A T C G C T A G C A T

FOXP1/MA0481.3/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCCAAGTTAACT-
--NNTGTTTACNN
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T
A C G T A C G T C G A T C G T A C G A T T C A G C G A T C A G T C A G T G C T A G A T C G C T A G C A T

PB0109.1_Bbx_2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCAAGTTAACT-----
TGATTGTTAACAGTTGG
C G A T T A G C A G T C G C T A C G T A A C T G G A C T A C G T C G T A C G T A G T A C C G A T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G