Information for 19-TCTGGTTCATTG (Motif 23)

A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.360e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCTGGTTCATTG-
--NAGGTCATTGA
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T
A C G T A C G T C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

HOXD13/MA0909.2/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCTGGTTCATTG--
---GTTTTATTGGG
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCTGGTTCATTG--
----TTTNATTGCY
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TCTGGTTCATTG--
----TTTCATTRCC
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCTGGTTCATTG
GTCTGTTTCTA--
A C G T A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TCTGGTTCATTG--
----TTTCATKGCC
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCTGGTTCATTG
TGTGACTCATT-
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTGGTTCATTG-----
--NANTTCATTGAATTA
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

HOXA13/MA0650.2/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCTGGTTCATTG--
---GTTTTATTGGN
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCTGGTTCATTG---
---NTTTCATTRCHD
A C G T A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T