| p-value: | 1e-3 |
| log p-value: | -7.499e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.67% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 45.0 +/- 0.0bp |
| Average Position of motif in Background | 60.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0130.1_Gm397_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GACTGTGTGCCA-- NNGCGTGTGTGCNGCN |
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PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GACTGTGTGCCA-- NNNNTTGTGTGCTTNN |
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NFIX(var.2)/MA1528.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GACTGTGTGCCA-- GTTGGCACGGTGCCAGG |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACTGTGTGCCA- TGGCAGNCTGCCAG |
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|
NFIC(var.2)/MA1527.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GACTGTGTGCCA-- GTTGGCACGGTGCCAAC |
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|
|
NFIA/MA0670.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GACTGTGTGCCA--- -----GGTGCCAAGT |
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|
NFIX/MA0671.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GACTGTGTGCCA-- -----CGTGCCAAG |
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|
Hic1/MA0739.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 6 |
| Orientation: | forward strand |
| Alignment: | GACTGTGTGCCA--- ------ATGCCAACC |
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|
|
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GACTGTGTGCCA- CTTGGCANNNTGCCAA |
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|
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GACTGTGTGCCA-- ----CTGTTCCTGG |
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