Information for 3-GCGGCGTC (Motif 40)

A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C T G A G T C A G T C A C T G A G T C
p-value:1e-2
log p-value:-6.193e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background95.7 +/- 87.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0131.1_Gmeb1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCGGCGTC-----
TGGGCGACGTCGTTAA
A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGGCGTC--
--GGCGCGCT
A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCGGCGTC----
NTNTGGGGGGTCNNNA
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCGGCGTC-----
AGAGCGGGGTCAAGTA
A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCGGCGTC
NANTGCSGCA--
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C
G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A A C G T A C G T

ZFP57/MA1583.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCGGCGTC--
NNTGCGGCAANNN
A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C

NHLH2/MA1529.1/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------GCGGCGTC--
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCGGCGTC------
AGCTCGGCGCCAAAAGC
A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

YY2/MA0748.2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCGGCGTC
AGATGGCGGCG--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G A C G T A C G T

BACH1/MA1633.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCGGCGTC---
NTGCTGAGTCATN
A C G T A C G T A C T G A G T C A C T G A C T G A G T C A C T G A C G T A G T C A C G T A C G T A C G T
C G A T C G A T A T C G T G A C G A C T C A T G G C T A A T C G A C G T T G A C T C G A A G C T T A G C