Information for 3-DCTGGTCCAAGT (Motif 3)

C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T A C G T A C T G C T A G G T C A A G T C G T A C C G T A A T C G G C T A
p-value:1e-9
log p-value:-2.216e+01
Information Content per bp:1.788
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif217.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets87.6 +/- 55.5bp
Average Position of motif in Background98.2 +/- 81.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--DCTGGTCCAAGT
CYWSTGGTCARA--
A C G T A C G T C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:DCTGGTCCAAGT---
---AGGTCAAGGTCA
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ZBTB6/MA1581.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:DCTGGTCCAAGT--
-NNGGCTCAAGGNN
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

THRB/MA1574.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:DCTGGTCCAAGT----
-GGGGTCAAAGGTCAT
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A A G C T

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:DCTGGTCCAAGT----
-GAGGTCAAAGGTCAC
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:DCTGGTCCAAGT---
-GGGGTCAAAGGTCA
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

PPARD/MA1550.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:DCTGGTCCAAGT----
AGGGGTCAAAGGTCAA
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T C A

Rxra/MA0512.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:DCTGGTCCAAGT---
-GGGGTCAAAGGTCA
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:DCTGGTCCAAGT--
-----NTCAAGTGG
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

TCF7/MA0769.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:DCTGGTCCAAGT-
--ANATCAAAGNN
C A G T A T G C A C G T A C T G A C T G A C G T A G T C G T A C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A