Information for 8-GCTCSAATCC (Motif 16)

A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G G T C A A C G T A C G T A T G C A C T G C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.962e+01
Information Content per bp:1.909
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets108.8 +/- 41.7bp
Average Position of motif in Background101.1 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTCSAATCC
NGCTN------
A C G T A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCTCSAATCC---
-NNCTAATCCCNN
A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C A C G T A C G T A C G T
A C G T G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

PITX1/MA0682.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCTCSAATCC-
---CTAATCCC
A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C A C G T
A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTCSAATCC
GCTCCG----
A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTCSAATCC-
GGCTCYAKCAYC
A C G T A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTCSAATCC
--GCTAATCC
A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCTCSAATCC
NNGGCTCAAGGNN
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCTCSAATCC----
---CTAATCCTCTT
A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTCSAATCC--
----TAATCCCN
A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCTCSAATCC--
--NYTAATCCYB
A C T G A G T C A C G T A G T C A T C G C G T A C G T A A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T