| p-value: | 1e-4 |
| log p-value: | -9.937e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 6.0 +/- 0.0bp |
| Average Position of motif in Background | 84.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AGGTCAAGCAGC TRAGGTCA------ |
|
|
|
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AGGTCAAGCAGC CAAAGKTCAA----- |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGGTCAAGCAGC AGGTCA------ |
|
|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AGGTCAAGCAGC CAAAGGTCAAA---- |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AGGTCAAGCAGC ATCAAGGTCA------ |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGGTCAAGCAGC GAGGTCAT----- |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AGGTCAAGCAGC CGAGGTCAC----- |
|
|
|
NR4A2/MA0160.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGGTCAAGCAGC AAGGTCAC----- |
|
|
|
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------AGGTCAAGCAGC GKBCARAGGTCA------ |
|
|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------AGGTCAAGCAGC NRBCARRGGTCA------ |
|
|
|