Information for 1-CAAACATACACG (Motif 1)

A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAAACATACACG
AAACAAACATTC---
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAAACATACACG
AAAGTAAACAAAAATT
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAAACATACACG---
AGCGGCACACACGCAA
A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

FOXA1/MA0148.4/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAAACATACACG
ATGTAAACATGT---
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAAACATACACG--
AGCAACAGCCGCACC
A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CAAACATACACG
AAATAAACA------
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAAACATACACG
GTAAACA------
A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

POL007.1_BREd/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAACATACACG
--NANANAC---
A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

FOXE1/MA1487.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAAACATACACG
CCTTAAATAAACAAT
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAAACATACACG
ATGCTAAAAATAGAA-
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C T G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T