Information for 4-ATAGTGCG (Motif 36)

C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A G T C A C G T C G T A A C G T
p-value:1e-2
log p-value:-5.319e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif30.5
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background100.1 +/- 82.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX14/MA1562.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATAGTGCG-
CATTGTTCGG
A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATAGTGCG--
ATAGTAGGTG
C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATAGTGCG-----
AAACATAATGAGGTTGC
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATAGTGCG------
CGAACAGTGCTCACTAT
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

SOX12/MA1561.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATAGTGCG--
NATTGTTCGGT
A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

NR1I3/MA1534.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATAGTGCG-
AAAGTTCAT
C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

Arid5a/MA0602.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATAGTGCG---
CTAATATTGCTAAA
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATAGTGCG---
CTAATATTGCTAAA
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATAGTGCG--
ATAATGAGGT
C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ATAGTGCG--
NNNCCATTGTGTNAN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G