Information for 17-TTTTAGGGTTTT (Motif 19)

C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
Reverse Opposite:
C T G A G C T A C T G A T C G A T A G C G A T C G A T C G C A T C G T A G C T A T G C A G C T A
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.716
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif221.3
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets99.7 +/- 56.1bp
Average Position of motif in Background99.7 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)2.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAGGGTTTT
NGANTTTTATGGCTCN
A C G T A C G T A C G T A C G T C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTAGGGTTTT
TTTTATGGCB--
C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTTAGGGTTTT
DGWTTTATGRCN--
A C G T A C G T C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTTTAGGGTTTT
TTTTATGGCM--
C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAGGGTTTT
NNATTTTATTGGNN-
A C G T A C G T A C G T C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAGGGTTTT-
NNGTTTTACGACTTTA
A C G T A C G T A C G T C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

RUNX3/MA0684.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTTTAGGGTTTT
NNTTGAGGTTNN
C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTTTAGGGTTTT--
NNGTANTGTTTTNC
C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTAGGGTTTT
NTNAATTTTATTGNATT
A C G T A C G T A C G T A C G T A C G T C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAGGGTTTT-
NNNTTTTACGACNTTN
A C G T A C G T A C G T C G A T A C G T C G A T C G A T C G T A C T A G C T A G A T C G A G C T G A C T C A G T G A C T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A