Information for 8-CGTCTTACTC (Motif 29)

A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C T G
p-value:1e-3
log p-value:-8.475e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif16.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background119.8 +/- 126.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGTCTTACTC--
-TTCTTTCTCTT
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T
A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGTCTTACTC
TAAGGCGTCTTG---
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTCTTACTC--
TGTCTGDCACCT
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

BATF3/MA0835.2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGTCTTACTC---
--TATGACTCATA
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G C A T C A T G G C T A A T G C C G A T G T A C C G T A C G A T G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGTCTTACTC--
CTGTCTGTCACCT
A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

BATF::JUN/MA0462.2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGTCTTACTC---
--TATGACTCATA
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T T G C A G C A T C A T G C T G A A T G C C G A T G T A C C G T A C A G T G C T A

BATF/MA1634.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGTCTTACTC---
--TATGACTCATA
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C G A T T G C A G C A T C A T G C G T A A T G C C G A T G T A C C G T A C A G T G C T A

ETV4/MA0764.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGTCTTACTC-
-NNCTTCCTGN
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T
A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CGTCTTACTC
NTTATTCGTCATNC--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T

FOS/MA0476.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGTCTTACTC---
--TGTGACTCATT
A G T C A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T