Information for 19-GAGTATAATA (Motif 34)

A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A A C G T C G T A A G T C A C G T A G T C
p-value:1e-2
log p-value:-6.634e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background109.6 +/- 78.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GAGTATAATA---
TAAGATTATAATACGG
A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---GAGTATAATA---
TATAATTATAATATTC
A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GAGTATAATA---
TTTAATTATAATTAAG
A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GAGTATAATA---
GCTAATTATAATTATC
A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0187.1_Tcf7_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GAGTATAATA---
NNNTTTNTAATACNG
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGTATAATA-------
--GTATAAAAGGCGGGG
A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GAGTATAATA-------
--GTATAAAAGGCGGGG
A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAGTATAATA---
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAGTATAATA---
GATGGGGTATCATTTTT
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGTATAATA---
ACCCGTATCAAATTT
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T