Information for 3-TGGCAACGCT (Motif 7)

A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C T G A C G T A C G T A C T G A G T C A G T C C G T A
p-value:1e-10
log p-value:-2.461e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets152.0 +/- 22.8bp
Average Position of motif in Background114.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TGGCAACGCT
NTAGCAACG--
A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TGGCAACGCT
TACCATAGCAACGGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TGGCAACGCT
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACGCT
CTTGGCAA----
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCAACGCT
TNCCATAGCAACNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G A C G T

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCAACGCT
TNCCATAGCAACNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAACGCT
NTTGGCANN---
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAACGCT
VGCTGGCA-----
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAACGCT
NNTTGGCANN---
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGGCAACGCT
SCCTAGCAACAG-
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A C T G A G T C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T