Information for 24-GCTATCAGGT (Motif 40)

A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A C T G C G T A A C G T C G T A A C T G A G T C
p-value:1e-2
log p-value:-6.885e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background82.5 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GCTATCAGGT---
--TATCAGGTTAC
A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

SIX2/MA1119.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTATCAGGT-------
-GTATCAGGTTTCAGNN
A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCAGGT--
GATGGGGTATCATTTTT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCTATCAGGT--
ACCCGTATCAAATTT
A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTATCAGGT-----
-NNATCAGGTGATNN
A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCAGGT--
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCTATCAGGT----
----VCAGGTRDRY
A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCAGGT--
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCTATCAGGT--
AATAGGGTATCAATATT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCTATCAGGT---
---NNCAGGTGNN
A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G