Information for 22-AGAGTACACATA (Motif 37)

C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.127e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.7 +/- 47.5bp
Average Position of motif in Background101.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAGTACACATA----
AAAGTAAACAAAAATT
C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

FOXA1/MA0148.4/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGAGTACACATA-
-ATGTAAACATGT
C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A A C G T
A C G T C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

ZNF274/MA1592.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGAGTACACATA--
NNCGAGAACTCATACN
A C G T A C G T C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----AGAGTACACATA
NNNVCTGWGYAAACASN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXA2/MA0047.3/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGAGTACACATA
-ATGTAAACATA
C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A
A C G T C T G A C G A T C T A G G C A T G T C A G T C A G C T A A G T C G C T A G C A T C G T A

FOXP1/MA0481.3/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGAGTACACATA
-ATGTAAACATA
C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A
A C G T C G T A C G A T C T A G C G A T G T C A G T C A G C T A A G T C G C T A G C A T G C T A

FOXA3/MA1683.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGAGTACACATA
-ATGTAAACATA
C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A
A C G T C T G A C G A T C T A G G A C T G T C A G T C A G C T A A G T C G C T A C G A T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGAGTACACATA
AAAGTAAACA--
C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGAGTACACATA
AAAGTAAACA--
C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGAGTACACATA---
TACATGTGCACATAAAA
A C G T A C G T C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A