Information for 4-CATCCCTCTC (Motif 11)

A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C
Reverse Opposite:
A C T G C G T A T A C G C T G A A C T G A C T G A T C G C G T A C G A T A T C G
p-value:1e-8
log p-value:-2.003e+01
Information Content per bp:1.831
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.27%
Number of Background Sequences with motif344.3
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets123.2 +/- 52.2bp
Average Position of motif in Background99.8 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CATCCCTCTC----
NNAGTCCCACTCNNNN
A C G T A C G T A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCTCTC
YCATCMATCA-
A C G T A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CATCCCTCTC
ACATTCCA---
A C G T A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C
C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T A C G T A C G T

Znf281/MA1630.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CATCCCTCTC-
CCTCCCCCACC
A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C A C G T
A G T C G T A C C A G T T G A C T A G C A T G C A T G C A T G C T C G A A T G C G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATCCCTCTC
GYCATCMATCAT
A C G T A C G T A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATCCCTCTC--
MCTCCCMCRCAB
A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C A C G T A C G T
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATCCCTCTC------
-ACCACTCTCGGTCAC
A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Wt1/MA1627.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATCCCTCTC--
CCCCTCCCCCACAC
A C G T A C G T A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C A C G T A C G T
G A T C A G T C G T A C T A G C C A G T A T G C A G T C A G T C G T A C A T G C C T G A A T G C T G C A A G T C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATCCCTCTC-
-TTCCCCCTAC
A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C A C G T
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

PH0137.1_Pitx1/Jaspar

Match Rank:10
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CATCCCTCTC-
NTTGTTAATCCCTCTNN
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T T A G C G T A C G T A C A G C T A T G C C G A T A G T C A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A