Information for 11-GGCATAGGGC (Motif 31)

A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T C G T A A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.353e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background77.7 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGCATAGGGC-
TAGGGCAAAGGTCA
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

NEUROD2/MA0668.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGCATAGGGC
ACCATATGGC
A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGCATAGGGC-
TGGGGCAAAGGTCA
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGCATAGGGC-
GTAGGGCAAAGGTCA
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCATAGGGC-----
TGCGCATAGGGGAGGAG
A C G T A C G T A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGCATAGGGC--
NTGCCCTTGGGCGN
A C G T A C G T A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

NEUROG1/MA0623.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCATAGGGC
GACATATGTC
A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C
T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGCATAGGGC
GACATATGTT
A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCATAGGGC-
NGCCATATGGTG
A C G T A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GGCATAGGGC-
VNAGGKCAAAGGTCA
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C T G A G T C A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A