Information for 23-AGGTCACAGTCA (Motif 38)

C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.410e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.8 +/- 30.6bp
Average Position of motif in Background141.3 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGGTCACAGTCA
AGGTCAAGGTCA
C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AGGTCACAGTCA
AAGGTCAC-----
A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGGTCACAGTCA
AGGTCAAGGTCA
C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

NR2F2/MA1111.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGGTCACAGTCA
CAAAGGTCAAA----
A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACAGTCA
TRAGGTCA------
A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGGTCACAGTCA
AGGTCA------
C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AGGTCACAGTCA--
NAGGTCACNNTGACC
A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR1/MA0112.3/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCACAGTCA----
CAGGTCACCGTGACCTT
A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACAGTCA
CGAGGTCAC-----
A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCACAGTCA
TCAAGGTCAN-----
A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T