Information for 18-GGGGAGCTTA (Motif 39)

A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.197e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background73.2 +/- 94.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GGGGAGCTTA
-CGGAGC---
A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGGAGCTTA-----
TGAGGGGGATTAACTAT
A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GGGGAGCTTA
---AAGCTTG
A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGGGAGCTTA
ATTTTNGGGGGGCNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A
T C G A C A G T G C A T C G A T C G A T C G A T C A T G C T A G A C T G A C T G A C T G A T C G A G T C G A C T G A C T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGGAGCTTA-----
TGAGGGGGATTAACTAT
A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

Znf281/MA1630.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGGGAGCTTA
GGTGGGGGAGG---
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G A C G T A C G T A C G T

Wt1/MA1627.1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGAGCTTA
GNGTGGGGGAGGNG-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A
T C A G A C G T T A C G G A C T T A C G C A T G T C A G T C A G T A C G G T C A A T C G C A T G T C A G C T A G A C G T

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGGAGCTTA-
AAGAGGATTAG
A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGGAGCTTA------
AGGGGGATTAGCTGCC
A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

ZNF682/MA1599.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAGCTTA-----
NNAGGGGCTTGGCCNN
A C G T A C T G A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G