Information for 16-TCATAATGCC (Motif 34)

A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A
p-value:1e-3
log p-value:-7.105e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background111.5 +/- 101.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX2/MA1547.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCATAATGCC
--ATAATCCC
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C
A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCATAATGCC-
---TAATCCCN
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCATAATGCC-
-GCTAATCCCC
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCATAATGCC
-CTTAATCCC
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

OTX2/MA0712.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCATAATGCC--
NNCTAATCCCNN
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C A C G T A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCATAATGCC-
-CCTAATCCGC
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

NKX6-3/MA1530.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCATAATGCC
-TTTAATGAN
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C
A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCATAATGCC
--CTAATCCC
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCATAATGCC-
TAAGATTATAATACGG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TCATAATGCC----
-----ATGCCCACC
A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C