| p-value: | 1e-5 |
| log p-value: | -1.349e+01 |
| Information Content per bp: | 1.746 |
| Number of Target Sequences with motif | 15.0 |
| Percentage of Target Sequences with motif | 5.77% |
| Number of Background Sequences with motif | 573.3 |
| Percentage of Background Sequences with motif | 1.25% |
| Average Position of motif in Targets | 107.9 +/- 47.4bp |
| Average Position of motif in Background | 99.5 +/- 64.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.13 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------TAGGTCTAKT TATAAGTAGGTCAA-- |
|
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|
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAGGTCTAKT -AGGCCTNG- |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAGGTCTAKT -AGGTCA--- |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----TAGGTCTAKT ATAAGTAGGTCA--- |
|
|
|
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAGGTCTAKT -AGGCCTAG- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAGGTCTAKT AAYTAGGTCA--- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAGGTCTAKT AAYTAGGTCA--- |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAGGTCTAKT ATCAAGGTCA--- |
|
|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TAGGTCTAKT WAABTAGGTCAV-- |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TAGGTCTAKT- AAWCTAGGTCARDNN |
|
|
|