Information for 16-ATCAGAACAAGC (Motif 18)

C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C T G C G T A A C G T
p-value:1e-3
log p-value:-8.932e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.0 +/- 0.0bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATCAGAACAAGC-
ATGTCACAACAACAC
A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0062.1_Sox12_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCAGAACAAGC-
NTTNAGAACAATTA
A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCAGAACAAGC--
ATATCAAAACAAAACA
A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATCAGAACAAGC--
AACACCAAAACAAAGGA
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SOX12/MA1561.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCAGAACAAGC
-ACCGAACAATG
C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C
A C G T G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATCAGAACAAGC
CAAACAACAACACCT
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATCAGAACAAGC
AAATAAGAAAAAAC
A C G T A C G T C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

SOX8/MA0868.2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATCAGAACAAGC-
---AGAACAATGG
C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

SOX14/MA1562.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATCAGAACAAGC
--CCGAACAATG
C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C
A C G T A C G T T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATCAGAACAAGC----
TTTAGAACAATAAAAT
C G T A A C G T A G T C C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T