Information for 16-CGAGCAGGCA (Motif 28)

A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C T G
p-value:1e-4
log p-value:-9.570e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.8 +/- 24.0bp
Average Position of motif in Background87.2 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CGAGCAGGCA
CACAGCAGGGG
A C G T A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGAGCAGGCA
--VGCTGGCA
A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A
A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGAGCAGGCA-----
----AAGGCAAGTGT
A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGAGCAGGCA-
CTCACAGCAGGGGG
A C G T A C G T A C G T A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGAGCAGGCA-
TGCGCAGGCGC
A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGAGCAGGCA-
CACAGCAGGGGG
A C G T A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

IKZF1/MA1508.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGAGCAGGCA--
GAAACAGGAAGT
A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T A C G T
T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGAGCAGGCA-
TAYAAAAGBWGGCAG
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

ZNF274/MA1592.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGAGCAGGCA----
NNCGAGAACTCATACN
A C G T A C G T A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGAGCAGGCA-
--GGTTGGCAT
A G T C A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C C G T A A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T