Information for 17-AGAGGCTATTAC (Motif 19)

C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
p-value:1e-3
log p-value:-9.056e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD8/MA0910.2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:forward strand
Alignment:AGAGGCTATTAC
----GCAATTAC
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

HOXA7/MA1498.1/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAGGCTATTAC
----GCAATTAC
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C

HOXB8/MA1502.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGAGGCTATTAC
----GCAATTAC
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

Six3/MA0631.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCTATTAC----
GATAGGGTATCACTAAT
A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCTATTAC----
GATAGGGTATCACTAAT
A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGAGGCTATTAC---
AGATGCTRCTRCCHT
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGAGGCTATTAC
--CGGCTGTTCC
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C
A C G T A C G T G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C

ZNF341/MA1655.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAGGCTATTAC-
-NNGGCTGTTCCN
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C

HOXA6/MA1497.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGAGGCTATTAC-
---GGTAATTAAC
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A C T G A T C G A G C T G T C A T C G A A C G T C G A T C G T A C T G A A T G C

PH0162.1_Six2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCTATTAC----
AATGGGGTATCACGTTT
A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T