Information for 14-AAATTCATGCTT (Motif 19)

C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.053e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAATTCATGCTT--
ACATTCATGACACG
C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AAATTCATGCTT
GGACTGAATTCATGCC-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C A C G T

PAX6/MA0069.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAATTCATGCTT---
-AANTCATGCGTGAA
C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

ZNF136/MA1588.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAATTCATGCTT---
GAATTCTTGGTTGAC
C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C A G C G T A T C G A C G A T A G C T G A T C A G C T C A G T C T A G C T A G G A C T C A G T C T A G C T G A G T A C

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAATTCATGCTT-
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AAATTCATGCTT
-----CAAGCTT
C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAATTCATGCTT
GAATATTCAT----
A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAATTCATGCTT
AAAGTTCAT----
A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAATTCATGCTT
GHATATKCAT----
A C G T A C G T C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAATTCATGCTT--
-CATTCATTCATTC
C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C