Information for 3-CCTCTCACTGAT (Motif 3)

A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A T C G A C G T A C T G C G T A A C T G C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.222e+01
Information Content per bp:1.948
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif60.00%
Number of Background Sequences with motif108.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets103.3 +/- 68.8bp
Average Position of motif in Background110.1 +/- 147.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX3/MA1114.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTCACTGAT--
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTCTCACTGAT
GSCTGTCACTCA-
A C G T A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTCACTGAT-
NNGCTGTCACTCANN
A C G T A C G T A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTCTCACTGAT-
-VCCTCTCTGDDY
A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T A C G T
A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTCTCACTGAT
NCTGTCAATCAN
A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTCTCACTGAT-----
-CAATCACTGGCAGAAT
A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTCTCACTGAT
TAACCACTCAAGAA-
A C G T A C G T A C G T A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTCTCACTGAT
ACTTTCACTTTC
A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCACTGAT
GTACACTCAC----
A C G T A C G T A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTCTCACTGAT
MCTCCCMCRCAB
A G T C A G T C C G A T A G T C A C G T A G T C G T C A A T G C A C G T A C T G C G T A A C G T
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T