| p-value: | 1e-3 |
| log p-value: | -7.942e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 5.88% |
| Number of Background Sequences with motif | 0.5 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 129.0 +/- 0.0bp |
| Average Position of motif in Background | 149.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTCACGGCCC TTTCATKGCC- |
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|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTCACGGCCC TTTTATGGCB- |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TTCACGGCCC TTTTATGGCM- |
|
|
|
PH0067.1_Hoxc12/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCACGGCCC-- GNNNTTTTACGACCTNA |
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|
|
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTCACGGCCC NTCAAGGTCA |
|
|
|
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TTCACGGCCC -YAACBGCC- |
|
|
|
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTCACGGCCC TTTCATTRCC- |
|
|
|
Nr5a2/MA0505.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TTCACGGCCC-- AAGTTCAAGGTCAGC |
|
|
|
HOXC11/MA0651.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTCACGGCCC NTTTTACGACC- |
|
|
|
PB0076.1_Sp4_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TTCACGGCCC------ GGTCCCGCCCCCTTCTC |
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