Information for 11-GACCAGTTAA (Motif 33)

A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C T G A C G T A G T C
p-value:1e-3
log p-value:-7.298e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background82.8 +/- 49.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GACCAGTTAA
-ACCACTTAA
A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A
A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GACCAGTTAA----
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GACCAGTTAA----
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACCAGTTAA----
CATAACCACTTAACAAC
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Nkx3-2/MA0122.3/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GACCAGTTAA-
ATAACCACTTAAA
A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACCAGTTAA---
AAAAACCAATTAAGAA
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0168.1_Hnf1b/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACCAGTTAA-----
ANNNCTAGTTAACNGNN
A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GACCAGTTAA---
AACAACCAATTAATTC
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GACCAGTTAA-
-ACTAGTTAAC
A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GACCAGTTAA
--CTAATTAA
A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C G T C G T A C G T A
A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A