Information for 3-AAAGMTAWCWTC (Motif 3)

C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
Reverse Opposite:
A T C G C T G A C G T A A C T G C G A T C G A T G T C A A C G T A T G C A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.313e+01
Information Content per bp:1.734
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif585.1
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets118.0 +/- 48.2bp
Average Position of motif in Background93.5 +/- 80.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAAGMTAWCWTC
AAGGATATNTN-
C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAAGMTAWCWTC--
GACAGAGATATCAGTGT
A C G T A C G T A C G T C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAGMTAWCWTC----
NNNNNBAGATAWYATCTVHN
A C G T A C G T A C G T A C G T C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAGMTAWCWTC
--AGATAAGANN
C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

GATA6/MA1104.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAAGMTAWCWTC-
NNAGATAAGATAN
C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C A C G T
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

GATA2/MA0036.3/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAGMTAWCWTC
NNAGATAAGNN-
C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAAGMTAWCWTC
--AGATAASR--
C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGMTAWCWTC
AAACATATGTTT
C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AAAGMTAWCWTC
NNTAAAAACGATGTTNT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T A C G T

GATA3/MA0037.3/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAGMTAWCWTC
--AGATAAGA--
C G T A C G T A G T C A A T C G G T C A A C G T C G T A C G T A T G A C C G A T G A C T A T G C
A C G T A C G T G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A A C G T A C G T