Information for 20-AACCAGATAC (Motif 40)

C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C G T A C G T
p-value:1e-3
log p-value:-7.218e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 0.0bp
Average Position of motif in Background102.0 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AACCAGATAC
GTAACCTGATA-
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T

SIX2/MA1119.1/Jaspar

Match Rank:2
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AACCAGATAC
AACTGAAACCTGATAC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AACCAGATAC
ATGCCAGACN-
A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AACCAGATAC--
TGWAAYCTGABACCB
A C G T A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACCAGATAC
AAACCACANN-
A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AACCAGATAC
AAACCGGTTT-
A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACCAGATAC-
AGAAACAGAAACT
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACCAGATAC
GWAAYHTGAKMC
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACCAGATAC
NWAACCACADNN
A C G T A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

HAND2/MA1638.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AACCAGATAC-
-ACCAGATGGC
C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C G T C G T A A G T C A C G T
A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C