Information for 11-TAGCCTGA (Motif 35)

A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T G T A C G T C A A C T G A C T G A T G C A C G T C G T A
p-value:1e-4
log p-value:-1.088e+01
Information Content per bp:1.925
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif395.3
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets102.1 +/- 53.2bp
Average Position of motif in Background101.9 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TAGCCTGA--
GTAACCTGATA
A C G T A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAGCCTGA------
NNGCCTGAGGCANN
A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAGCCTGA------
GGGCCTGAGGCGGG
A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TAGCCTGA
NNACTTGCCTT-
A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAGCCTGA---
WTGSCCTSAGGS
A C G T A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAGCCTGA------
NTNGCCTCAGGCNNN
A C G T A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

SIX2/MA1119.1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAGCCTGA---
AACTGAAACCTGATAC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAGCCTGA
TWGTCTGV
A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAGCCTGA----
-TGCCTGAGGCN
A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAGCCTGA---
ATGCCCTGAGGC
A C G T A C G T C G T A A T C G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C