Information for 18-GGCAAATTGT (Motif 32)

A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.015e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif27.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background104.5 +/- 111.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGCAAATTGT------
--AAAATTGTTATGAA
A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGCAAATTGT------
GGAAAAATTGTTAGGAA
A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCAAATTGT-------
AATCAATTGTTCCGCTA
A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCAAATTGT-------
CNNNTATTGTTCNNNNN
A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGCAAATTGT-
-----ATTGTT
A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGCAAATTGT-
--CTCATTGTC
A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GGCAAATTGT--
-----ATTGTTA
A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GGCAAATTGT----
-----ATTGTTTAN
A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGCAAATTGT-----------
GTGCTAATTGTGTGTGTACGCT
A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCAAATTGT------
ANNTCTATTGTTCNNNA
A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A