Information for 15-TTCTTTAAAGGC (Motif 18)

A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C
Reverse Opposite:
C A T G A G T C A G T C A C G T A G C T C A G T G T C A C G T A C G T A A C T G G T C A T C G A
p-value:1e-3
log p-value:-9.054e+00
Information Content per bp:1.633
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCTTTAAAGGC
GNCTATAAAAGG
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTCTTTAAAGGC-
---TTTAATTGCN
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T
A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTCTTTAAAGGC-
---TTTTATGGCB
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T
A C G T A C G T A C G T G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTCTTTAAAGGC-
---TTTTATGGCM
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T
A C G T A C G T A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C

BCL6/MA0463.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTCTTTAAAGGC---
ATGCTTTCGAGGAATT
A C G T A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T A C G T A C G T
G C T A G A C T C T A G G T A C G C A T A C G T G C A T A G T C A C T G G C T A C T A G A C T G C T G A C G T A G A C T C A G T

TCF7/MA0769.2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTCTTTAAAGGC-
--ANATCAAAGNN
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T
A C G T A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TTCTTTAAAGGC--
----NTCAAGGTCA
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TTCTTTAAAGGC-
TTCAAAWTAAAAGTC
A C G T A C G T A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C

NR5A1/MA1540.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TTCTTTAAAGGC---
----GTCAAGGTCAC
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTCTTTAAAGGC
--ACATCAAAGG
A G C T A C G T T G A C G A C T G A C T A C G T G C T A C T G A T C G A C T A G A C T G G A T C
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G