Information for 7-CGTGATAGCT (Motif 28)

A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T C G T A A C G T A G T C C G T A A G T C A C T G
p-value:1e-3
log p-value:-9.050e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background111.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATAGCT----
ANNNATGATACCCCATC
A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTGATAGCT-----
NNNCTGATATCTCNNNN
A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATAGCT----
ANANGTGATACCCCATT
A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CGTGATAGCT
NHGTCGTGAYDN--
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGTGATAGCT----
GATATTGACAGCTGCGT
A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGTGATAGCT----
GTATTGACAGCTNNTT
A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

TFE3/MA0831.2/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGTGATAGCT
CACGTGAC----
A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T
A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATAGCT----
ANANNTGATACCCNATN
A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

MLX/MA0663.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGATAGCT
ATCACGTGAT----
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGTGATAGCT
NCGTGACN---
A C G T A G T C A C T G A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T