Information for 9-CTTAAAAAATGG (Motif 12)

A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G
p-value:1e-3
log p-value:-8.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTTAAAAAATGG-
---RAACAATGGN
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

ZNF384/MA1125.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTAAAAAATGG
TTTAAAAAAAAA-
A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTTAAAAAATGG----
----CAAGATGGCGGC
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTAAAAAATGG--
---AAACAATGGAA
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CTTAAAAAATGG--
---AAACAATGGCA
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTAAAAAATGG
--VRAACAATGG
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTAAAAAATGG---
CTCACACAATGGCGC
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTTAAAAAATGG
---GAACAATGG
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTTAAAAAATGG
TACTGGAAAAAAAA-
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTAAAAAATGG-
---GAACAATGGN
A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G