Information for 2-GACCAATCGA (Motif 9)

A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A C G T A C G T A C T G A C T G A C G T A G T C
p-value:1e-3
log p-value:-9.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GACCAATCGA
AGCCAATCGG
A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYA/MA0060.3/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GACCAATCGA-
AACCAATCAGA
A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACCAATCGA
ACTAGCCAATCA-
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GACCAATCGA-
AGCCAATCAGA
A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACCAATCGA
GAACAATGG-
A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

NFYB/MA0502.2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GACCAATCGA
NTGGCCAATGAG
A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GACCAATCGA
--CCAATCAA
A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GACCAATCGA-
CCATCAATCAAA
A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GACCAATCGA---
AATGAACAATGGAATT
A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GACCAATCGA--
NNNNNGAACAATTGANN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C T G C G T A A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T