Information for 5-TTCACCATCTAT (Motif 5)

A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G C G T A A C G T A C T G A C T G A C G T A C T G C G T A C G T A
p-value:1e-4
log p-value:-1.079e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTCACCATCTAT-
---ACCATCTGTT
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTCACCATCTAT--
-NNNCCATCTGTNN
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TTCACCATCTAT---
--NNCCATCTGTNNN
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTCACCATCTAT-
---GCCATCTGTT
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Ptf1a/MA1618.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTCACCATCTAT--
-NNAACATCTGTNN
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCACCATCTAT-
-CGACCATCTGTT
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

SRF/MA0083.3/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCACCATCTAT-----
-TGACCATATATGGTCA
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTCACCATCTAT--
----YCATCMATCA
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCACCATCTAT-
---RCCATMTGTT
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

MAFG/MA0659.2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTCACCATCTAT-
GAGTCAGCATTTTTT
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T A G T C A C G T C G T A A C G T A C G T
C T A G C G T A T A C G C G A T G T A C C G T A A C T G G A T C C G T A C G A T G C A T G C A T G A C T G A C T G C A T