Information for 19-GGGATWAGAC (Motif 32)

A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A G T C A A G C T A G T C A G T C A G T C
p-value:1e-6
log p-value:-1.408e+01
Information Content per bp:1.890
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif74.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets135.9 +/- 35.8bp
Average Position of motif in Background81.6 +/- 52.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGGATWAGAC
AAGGGATTAGAA
A C G T A C G T A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGATWAGAC
NGGATTAN--
A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGATWAGAC
GGGATTAN--
A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GGGATWAGAC-
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GGGATWAGAC
GGGATTANN-
A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGATWAGAC
NNGGATTAGN-
A C G T A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGATWAGAC
RGGATTAR--
A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGATWAGAC
-GGATTAGC-
A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGATWAGAC
GNGGATTAGN-
A C G T A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGATWAGAC
VRGGATTARN-
A C G T A C T G A C T G A C T G C T G A A C G T G C A T C G T A A C T G C G T A A G T C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T