Information for 8-CGCCTACAAA (Motif 29)

A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G A G T C A C T G
p-value:1e-3
log p-value:-8.220e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background103.2 +/- 131.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCCTACAAA
CACCTACTAT
A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCTACAAA
ACGCCCACGCA
A C G T A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTACAAA
YCCGCCCACGCN
A C G T A C G T A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGCCTACAAA
CRCCCACGCA
A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTACAAA--
ATTTGCATACAATGG
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

ZSCAN29/MA1602.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGCCTACAAA--
CGTCTACACGGG
A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGCCTACAAA---
--AAAACAAAGAA
A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

HOXA13/MA0650.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCCTACAAA--
-CCCAATAAAAC
A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T
A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGCCTACAAA-
-CCYMATAAAA
A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C G T
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGCCTACAAA---
-BMRVACAAWGGV
A G T C A C T G A G T C A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A