Information for 5-GAGAGAGAGGGG (Motif 6)

T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G
Reverse Opposite:
T G A C G A T C G A T C G T A C A G C T A G T C A C G T A G T C C G A T A G T C A C G T A G T C
p-value:1e-9
log p-value:-2.247e+01
Information Content per bp:1.770
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif239.0
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets118.3 +/- 45.4bp
Average Position of motif in Background103.1 +/- 69.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAGGGG
NAGAGAAAGNA-
T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGAGAGAGGGG
RHHCAGAGAGGB-
A C G T T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGAGAGGGG-
NNNACCGAGAGTNNN
A C G T A C G T T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAGAGAGAGGGG-
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGAGAGGGG
GAAAGTGAAAGT--
A C G T A C G T T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

ZNF148/MA1653.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGAGAGAGGGG--
--GGGGGAGGGGNG
T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G A C G T A C G T
A C G T A C G T T A C G T A C G C T A G T C A G T A C G G T C A A T C G A T C G T A C G T A C G T A C G T C A G

PKNOX1/MA0782.2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAGAGAGAGGGG
TTTGAGTGACAGCTA
A C G T A C G T A C G T T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

MAZ/MA1522.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGAGAGAGGGG--
---GGGGAGGGGNN
T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAGGGG
GTGGGGGAGGGG
T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGAGAGAGGGG----
NATNGGGNGGGGANAN
T C A G C G T A T C A G C G T A A C T G C G T A C T A G C T G A A C T G C T A G C T A G A C T G A C G T A C G T A C G T A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G