Information for 2-TTTTCTATTGAC (Motif 2)

A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C
Reverse Opposite:
A T C G A G C T A G T C C G T A C G T A C G A T C G T A A T C G C G T A C G T A G T C A C T G A
p-value:1e-15
log p-value:-3.458e+01
Information Content per bp:1.883
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif19.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets88.7 +/- 43.2bp
Average Position of motif in Background80.7 +/- 48.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTTTCTATTGAC-
-----TATTGAYY
A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

HOXB13/MA0901.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCTATTGAC-
NNATTTTATTGGNN
A C G T A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTTCTATTGAC
ATTTTCCATT---
A C G T A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCTATTGAC-
AGNGTTCTAATGANN
A C G T A C G T A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTTCTATTGAC
ATTTTCCATT---
A C G T A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCTATTGAC--
NNANTTTTATTGGNNN
A C G T A C G T A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXA13/MA0650.2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTTTCTATTGAC
-GTTTTATTGGN
A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C
A C G T C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCTATTGAC--
NNAATTTTATTGGNTN
A C G T A C G T A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCTATTGAC--
NTNAATTTTATTGNATT
A C G T A C G T A C G T A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTTTCTATTGAC
----NTAATGAT
A G C T A C G T A C G T A C G T A T G C A C G T C G T A C G A T A C G T A C T G C T G A A T G C
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T