Information for 2-AGCTAAGKCG (Motif 3)

C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
Reverse Opposite:
A G T C C T A G G T A C A G T C C G A T A C G T C G T A T A C G A G T C G C A T
p-value:1e-15
log p-value:-3.506e+01
Information Content per bp:1.798
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.2 +/- 64.7bp
Average Position of motif in Background84.6 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCTAAGKCG
CAGATAAGGN-
A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T

GATA4/MA0482.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCTAAGKCG
NNAGATAAGGNN
A C G T A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGCTAAGKCG
NVAGATAAGR--
A C G T A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGCTAAGKCG
NNAGATAAGNN-
A C G T A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCTAAGKCG
NAGATAAGNN-
A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGCTAAGKCG-
--TTAAGTGGT
C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCTAAGKCG-----
NTNNTTAAGTGGNTNAN
A C G T A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCTAAGKCG-----
---TAAGGCGTCTTG
C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGCTAAGKCG
NBWGATAAGR--
A C G T A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCTAAGKCG
CAGGTAAGTAT
A C G T C G T A C T A G A G T C A C G T C G T A C G T A C T A G A C T G A G T C A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T