Information for 5-ACCAAAGGCATA (Motif 9)

C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C T G A C T G A C G T
p-value:1e-3
log p-value:-8.953e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background145.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACCAAAGGCATA
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ACCAAAGGCATA
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ACCAAAGGCATA
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACCAAAGGCATA
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACCAAAGGCATA
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----ACCAAAGGCATA
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACCAAAGGCATA
AAAGATCAAAGGAA--
A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACCAAAGGCATA
ASATCAAAGG----
A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACCAAAGGCATA
AAAGATCAAAGGGTT-
A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACCAAAGGCATA
RACAAWGG----
C G T A A G T C A G T C C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C G T C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T