Information for 1-TTAGACGGTC (Motif 13)

A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C T G A C G T A G T C A C G T C G T A C G T A
p-value:1e-3
log p-value:-8.295e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets133.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TTAGACGGTC
AACCGTTAAACGGTC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTAGACGGTC
GCTAAACGGT-
A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGACGGTC
NCNGTGTAGACG---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G A C G T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTAGACGGTC-----
NNNNTAACGGTTNNNAN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAGACGGTC
CCAGACRSVB
A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAGACGGTC
CCAGACAG--
A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTAGACGGTC--
TTCGGTGGTCGC
A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C A C G T A C G T
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

NR1D2/MA1532.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTAGACGGTC--
GGGTTAGTGGGTCAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C A C G T A C G T
T C A G C A T G C A T G A C G T G A C T C G T A A T C G A C G T C T A G C A T G C T A G C A G T A G T C C T G A C A G T

NR1D1/MA1531.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TTAGACGGTC--
GGGTCAGTAGGTCAG
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C A C G T A C G T
T C A G C A T G C T A G A C G T A G T C C G T A T A C G A C G T T C G A A C T G C T A G A C G T A G T C C T G A C T A G

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTAGACGGTC
TCTAGACA---
A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C T G A C G T A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T