Information for 6-AGCTACGA (Motif 28)

C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T C G T A A C T G A G T C A C G T
p-value:1e-5
log p-value:-1.290e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets98.1 +/- 40.2bp
Average Position of motif in Background108.4 +/- 54.6bp
Strand Bias (log2 ratio + to - strand density)3.8
Multiplicity (# of sites on avg that occur together)2.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGCTACGA
-GCTCCG-
C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCTACGA-----
ACATGCTACCTAATAC
A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AGCTACGA-
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

RFX7/MA1554.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCTACGA
NTAGCAACG-
A C G T A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGCTACGA
CGCAGCTGCG-
A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCTACGA--------
ATTTACGACAAATAGC
C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

GATA6/MA1104.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGCTACGA---
NNAGATAAGATAN
A C G T A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCTACGA-----
ACTTGCTACCTACACC
A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCTACGA
CAGCC----
A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGCTACGA-
TACCATAGCAACGGT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T C G T A A G T C A C T G C G T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T