Information for 9-ACTGAGTGAC (Motif 21)

C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C T G A C G T
p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.955
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets108.7 +/- 42.3bp
Average Position of motif in Background97.1 +/- 49.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.2/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:ACTGAGTGAC-----
TTTGAGTGACAGCTA
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PBX3/MA1114.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ACTGAGTGAC------
GGGTGAGTGACAGGCGG
A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACTGAGTGAC---
-BTGABTGACAGS
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACTGAGTGAC---
-NTGATTGACAGN
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:ACTGAGTGAC----
--TGAGTGACAGSC
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACTGAGTGAC--
-NTGAGTCATCN
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T A C G T
A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

BATF/MA1634.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACTGAGTGAC-
NATGAGTCATN
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T
C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A

BATF::JUN/MA0462.2/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTGAGTGAC-
NATGAGTCATN
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T
C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A

BACH1/MA1633.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACTGAGTGAC-
NTGCTGAGTCATN
A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T
C G A T C G A T A T C G T G A C G A C T C A T G G C T A A T C G A C G T T G A C T C G A A G C T T A G C

BATF3/MA0835.2/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACTGAGTGAC-
NATGAGTCATN
C G T A A G T C A C G T A C T G C G T A A C T G A C G T C T A G C G T A A G T C A C G T
C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A