| p-value: | 1e-13 |
| log p-value: | -3.100e+01 |
| Information Content per bp: | 1.972 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.72% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 103.9 +/- 45.4bp |
| Average Position of motif in Background | 53.4 +/- 24.6bp |
| Strand Bias (log2 ratio + to - strand density) | 2.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Zic1::Zic2/MA1628.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AGCAGGGTATGA CACAGCAGGGG---- |
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|
Spz1/MA0111.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AGCAGGGTATGA-- ---AGGGTAACAGC |
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|
PH0166.1_Six6_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCAGGGTATGA----- AATAGGGTATCAATATT |
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|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AGCAGGGTATGA CACAGCAGGGGG--- |
|
|
|
PB0059.1_Six6_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCAGGGTATGA----- AATAGGGTATCATATAT |
|
|
|
Zic2/MA1629.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----AGCAGGGTATGA CTCACAGCAGGGGG--- |
|
|
|
Six3/MA0631.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCAGGGTATGA----- GATAGGGTATCACTAAT |
|
|
|
PH0163.1_Six3/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCAGGGTATGA----- GATAGGGTATCACTAAT |
|
|
|
PH0165.1_Six6_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCAGGGTATGA----- AATAGGGTATCAATTAT |
|
|
|
PH0162.1_Six2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGCAGGGTATGA----- AATGGGGTATCACGTTT |
|
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