Information for 11-GACAGTAG (Motif 28)

A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A C G T A C T G A G C T A G T C
p-value:1e-2
log p-value:-6.445e+00
Information Content per bp:1.914
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.24%
Number of Background Sequences with motif810.2
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets91.1 +/- 54.7bp
Average Position of motif in Background100.5 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---GACAGTAG-----
ATTTACAGTAGCAAAA
A C G T A C G T A C G T A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

OSR1/MA1542.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GACAGTAG--
NACAGTAGCN
A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GACAGTAG---
-ATAGTAGGTG
A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GACAGTAG-----
ATGTACAGTAGCAAAG
A C G T A C G T A C G T A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

OSR2/MA1646.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACAGTAG---
AAACAGAAGCAG
A C G T A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

MYB/MA0100.3/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GACAGTAG--
NNCAGTTGNN
A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

ZNF317/MA1593.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACAGTAG---
TAACAGCAGACT
A C G T A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T A C G T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACAGTAG
TTGACAG---
A C G T A C G T A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GACAGTAG----
GCACAYAGTAGGKCY
A C G T A C G T A C G T A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GACAGTAG-
GACAATGNN
A C T G C T G A G T A C C G T A C T A G A C G T C G T A A C T G A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G