Information for 3-GAGAAACTTTCA (Motif 5)

A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A A C T G A C G T A C G T A C G T A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAGAAACTTTCA-----
-----ACTTTCACTTTC
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGAAACTTTCA
NAGAGAAAGNA---
A C G T A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGAAACTTTCA---
GAAAAAATTGCAAGG
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAGAAACTTTCA--
----TGGTTTCAGT
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGAAACTTTCA
-ATGAACTTT--
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A
A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGAAACTTTCA
NAGAAACAGNN-
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GAGAAACTTTCA-----
-----ACTTTCACTTTC
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

PH0170.1_Tgif2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGAAACTTTCA----
AACTAGCTGTCAATAC
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGAAACTTTCA----
AACGAGCTGTCAATAC
A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGAAACTTTCA---
CGACCAACTGCCATGC
A C G T A C T G C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C