Information for 1-GCCCGAAC (Motif 36)

A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C A C T G A C T G A C T G A G T C
p-value:1e-2
log p-value:-6.288e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif19.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background72.9 +/- 70.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX12/MA1561.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCCCGAAC----
-ACCGAACAATG
A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCCCGAAC
CTGCCCGCA-
A C G T A C G T A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCCCGAAC
GAGSCCGAGC
A C G T A C G T A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCCCGAAC--
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGAAC-
TACCCGCATN
A C G T A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

ZNF449/MA1656.1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCCCGAAC--
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

SOX14/MA1562.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCCCGAAC----
--CCGAACAATG
A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCCGAAC-
GGCGGGAAAH
A C G T A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T
T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCCCGAAC--
RCCGGAAGTD
A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

ZBTB12/MA1649.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCCGAAC--
ATCTGGAACCC
A C G T A C T G A G T C A G T C A G T C A C T G C G T A C G T A A G T C A C G T A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C