| p-value: | 1e-3 |
| log p-value: | -8.231e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 5.88% |
| Number of Background Sequences with motif | 0.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 35.0 +/- 0.0bp |
| Average Position of motif in Background | 70.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Msx3/MA0709.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATTAGTCG CCAATTAA--- |
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LHX2/MA0700.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CAATTAGTCG AACCAATTAAT-- |
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|
MSX1/MA0666.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATTAGTCG CCAATTAG--- |
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|
MSX2/MA0708.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATTAGTCG CCAATTAA--- |
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|
|
TLX2/MA1577.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.75 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATTAGTCG CTAATTAG--- |
|
|
|
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 6 |
| Score: | 0.75 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAATTAGTCG BCMATTAG--- |
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|
|
GBX2/MA0890.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.75 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAATTAGTCG ACCAATTAGC-- |
|
|
|
PH0089.1_Isx/Jaspar
| Match Rank: | 8 |
| Score: | 0.74 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CAATTAGTCG- ACTCCTAATTAGTCGT |
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|
|
BARX1/MA0875.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATTAGTCG GCAATTAG--- |
|
|
|
EN1/MA0027.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATTAGTCG CTAATTAG--- |
|
|
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