Information for 4-AGASAGWC (Motif 28)

C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
Reverse Opposite:
A C T G G C A T T G A C A C G T T A C G A C G T A G T C C G A T
p-value:1e-4
log p-value:-1.130e+01
Information Content per bp:1.773
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif25.56%
Number of Background Sequences with motif9249.7
Percentage of Background Sequences with motif19.26%
Average Position of motif in Targets106.6 +/- 55.1bp
Average Position of motif in Background101.0 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AGASAGWC
NAGAAACAGNN
A C G T A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGASAGWC
NAGAGAAAGNA
A C G T A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

Stat2/MA1623.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGASAGWC---
AGAAACAGAAACT
A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C A C G T A C G T A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGASAGWC
AAAACAAAGAA
A C G T A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGASAGWC
-CACAGN-
C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGASAGWC
CCAGACAG--
A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGASAGWC
CCAAAAATAG--
A C G T A C G T A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGASAGWC
GTAAACAG--
A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGASAGWC
RHHCAGAGAGGB
A C G T A C G T A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------AGASAGWC
ATGCTAAAAATAGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C A G C G T A A T G C C G T A A C T G C G T A G T A C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A