Information for 18-ATGAGGGATG (Motif 29)

C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.482e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets87.2 +/- 59.9bp
Average Position of motif in Background93.7 +/- 53.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATGAGGGATG--
ATGATKGATGRC
C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:ATGAGGGATG-
-TGATKGATGR
C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G A C G T
A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

Znf281/MA1630.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATGAGGGATG
GGTGGGGGAGG
A C G T C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G

NFE2/MA0841.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGGGATG
GATGAGTCATN
A C G T C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGGGATG--
NNTGATTGATGNN
A C G T C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G A C G T A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

JDP2/MA0655.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATGAGGGATG
ATGAGTCAT-
C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T

BACH2/MA1101.2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAGGGATG----
NAANGATGAGTCATGNTTN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G T A A G C T T A C G T C G A A G C T C A T G T G C A A T C G A C G T G T A C C T G A A G C T C A T G T A G C G C A T G C A T G C A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGAGGGATG-
-TGATTGATGA
C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

JUNB/MA0490.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGAGGGATG-
NNATGAGTCATNN
A C G T A C G T C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G A C G T
C G T A C G T A T C G A G A C T C A T G G C T A T A C G G C A T G T A C C T G A A G C T G A C T G C A T

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGAGGGATG
TATGCGGGTA-
A C G T C G T A A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T