Information for 19-GGGCAATCAC (Motif 25)

A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A C G T A C G T A C T G A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.783e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background68.7 +/- 47.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GGGCAATCAC
--CCAATCAA
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGCAATCAC-
AGCCAATCAGA
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGGCAATCAC----
AAGGCGAAATCATCGCA
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGGCAATCAC-
AACCAATCAGA
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

GFI1/MA0038.2/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGCAATCAC----
--CAAATCACTGCA
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

LHX1/MA1518.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGCAATCAC
--GCAATTAC
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C
A C G T A C G T A T C G G A T C T G C A G C T A A C G T A G C T C G T A T A G C

MSANTD3/MA1523.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGCAATCAC
GTACACTCAC
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGCAATCAC-
-RGCAATNAAA
A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A C G T
A C G T C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGCAATCAC-
GGGGGAATCCCC
A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

RELB/MA1117.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAATCAC
NNGGGGAATNC-
A C G T A C G T A C T G A C T G A C T G A G T C C G T A C G T A A C G T A G T C C G T A A G T C
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T