Information for 1-BGBCTATTCTTV (Motif 1)

A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A
Reverse Opposite:
A C G T C G T A C G T A A T C G C G T A C G T A A G C T C G T A A C T G T C G A G T A C T A G C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.748
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif497.7
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets146.0 +/- 48.2bp
Average Position of motif in Background96.9 +/- 66.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.2/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:BGBCTATTCTTV-
---CCATTGTTCT
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T
A C G T A C G T A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:BGBCTATTCTTV-----
CNNNTATTGTTCNNNNN
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-BGBCTATTCTTV----
ANNTCTATTGTTCNNNA
A C G T A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:BGBCTATTCTTV-----
AATCAATTGTTCCGCTA
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:BGBCTATTCTTV----
-TTCTATTTTTAGNNN
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

MEF2A/MA0052.4/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:BGBCTATTCTTV---
NNTCTATTTTTAGNN
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----BGBCTATTCTTV------
TNNANNTCTATTGTTNTNNANN
A C G T A C G T A C G T A C G T A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.72
Offset:5
Orientation:forward strand
Alignment:BGBCTATTCTTV
-----ATTGTTA
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0072.1_Sox5_1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:BGBCTATTCTTV----
NNTTTATTGTTCTNNN
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

SOX15/MA1152.1/Jaspar

Match Rank:10
Score:0.71
Offset:3
Orientation:forward strand
Alignment:BGBCTATTCTTV-
---CTATTGTTTT
A C T G A C T G A C G T G T A C A C G T C T G A A C G T A C G T A T G C A C G T A C G T T C G A A C G T
A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T