Information for 1-ATTCTCCC (Motif 11)

C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C
Reverse Opposite:
C T A G A C T G C T A G C G T A A C T G C G T A C G T A A C G T
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.882
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif4095.0
Percentage of Background Sequences with motif4.89%
Average Position of motif in Targets109.1 +/- 63.0bp
Average Position of motif in Background102.5 +/- 79.5bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATTCTCCC-
GAATTCCCCGG
A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C A C G T
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ATTCTCCC----
AATCAATTGTTCCGCTA
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCTCCC---
NNTTTATTGTTCTNNN
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCTCCC---
AANTTATTGTTCTNNA
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATTCTCCC
--GCTTCC
C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

SOX8/MA0868.2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTCTCCC
CCATTGTTCT
A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------ATTCTCCC--
ANNTCCATTGTTCNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTCTCCC----
CNNNTATTGTTCNNNNN
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTCTCCC
NCCATTGTTY-
A C G T A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ATTCTCCC---
GTATCTATTGTTCTTTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A