Information for 2-ATGGAGMRSYRT (Motif 2)

C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
Reverse Opposite:
C G T A A G C T C T G A A T G C A G T C C A G T A G T C A C G T A G T C A G T C C G T A A C G T
p-value:1e-6
log p-value:-1.460e+01
Information Content per bp:1.832
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif149.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets117.0 +/- 54.8bp
Average Position of motif in Background99.1 +/- 69.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGGAGMRSYRT
-GGGAGGACNG-
C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGGAGMRSYRT
GRTGMTRGAGCC----
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATGGAGMRSYRT---
NNNNTGAGCACTGTNNG
A C G T A C G T C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATGGAGMRSYRT
-CGGAGC-----
C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGGAGMRSYRT
BTBRAGTGSN--
C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

YY2/MA0748.2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGGAGMRSYRT
AGATGGCGGCG---
A C G T A C G T C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATGGAGMRSYRT
-TGGAACAGMA-
C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATGGAGMRSYRT
-TTGAGTGSTT-
C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGGAGMRSYRT
GTGGAT------
C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGGAGMRSYRT
CTYRAGTGSY--
C G T A A C G T A C T G C T A G C G T A A C T G G T A C C T A G A T C G A G C T C T G A A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T