Information for 21-TATGTGAGTATG (Motif 27)

A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A G T C A C G T A G T C C G T A A G T C C G T A A C G T C G T A
p-value:1e-3
log p-value:-8.355e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background181.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TATGTGAGTATG
TATGTAAATAT-
A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TATGTGAGTATG-
---GTGAGTGNAC
A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

FOXC1/MA0032.2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TATGTGAGTATG
TATGTAAATAT-
A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TATGTGAGTATG
CAGGTAAGTAT-
A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TATGTGAGTATG
TATGCGGGTA--
A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TATGTGAGTATG---
NTTNTATGAATGTGNNC
A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Nkx3-2/MA0122.3/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TATGTGAGTATG
NTTAAGTGGTTNN-
A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T A C G T

KLF9/MA1107.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TATGTGAGTATG----
NGNGTGGGTGTGGCNG
A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C T G T C A G C A T G T C A G C A G T T C A G A C T G T A C G A G C T A T C G A C G T T C A G A C T G A T G C A G C T A C T G

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TATGTGAGTATG-
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TATGTGAGTATG
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C T G
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G