Information for 22-CCAAAATACCTA (Motif 23)

A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.455e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background134.9 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCAAAATACCTA
DCYAAAAATAGM--
A C G T A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAAAATACCTA
KCCAAAAATAGC--
A C G T A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAAAATACCTA
ATGCTAAAAATAGAA-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAAAATACCTA--
TGCCAAAATAAACANN
A C G T A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAAAATACCTA
CCAAAAATAG---
A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAAAATACCTA
GCTAAAAATAGC--
A C G T A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CCAAAATACCTA
TTCTAAAAATAGAAA
A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCAAAATACCTA----
TACTAAGTACTTAAATG
A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CCAAAATACCTA
--NANANAC---
A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCAAAATACCTA
CCCAATAAAAC--
A C G T A G T C A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T C G T A
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C A C G T A C G T