Information for 13-TGAGCTTTGGGG (Motif 17)

A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C G T A G T C C G T A
p-value:1e-4
log p-value:-9.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTTTGGGG
CTGACCTTTG---
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCTTTGGGG
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCTTTGGGG
NNNNTGACCTTTNNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A1/MA1112.2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCTTTGGGG
NNTGACCTTTNN--
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCTTTGGGG
NNTGACCTTTN---
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGAGCTTTGGGG
TTGAMCTTTG---
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T A C G T A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCTTTGGGG--
NTGACCTTTGGACCC
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G C A T A G C T C T A G C T A G G T C A G T A C A G T C A G T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGAGCTTTGGGG
TGACCTTTNCNT
A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR1I3/MA1534.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAGCTTTGGGG
ATGAACTTT----
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGAGCTTTGGGG
NNTGGACTTTGNN-
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A C T G
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A A C G T