Information for 14-GGGTTGCCAAGT (Motif 16)

A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C
p-value:1e-4
log p-value:-9.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background148.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GGGTTGCCAAGT-
--NNTGCCAAGNN
A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGGTTGCCAAGT
--GGTGCCAAGT
A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GGGTTGCCAAGT
---TTGCCAAG-
A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTGCCAAGT--
NNCGTTGCTATGGNN
A C G T A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGGTTGCCAAGT
--CGTGCCAAG-
A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTGCCAAGT--
NCCGTTGCTANGNGN
A C G T A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GGGTTGCCAAGT------
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGTTGCCAAGT
CTGTTGCTAGGS
A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

RFX1/MA0509.2/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGGTTGCCAAGT--
CTGTTGCTATGGCA
A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

RFX3/MA0798.2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGTTGCCAAGT--
CGGTTGCTATGGCA
A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A