Information for 3-GAACTCTGCCCA (Motif 5)

A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G A G T C C G T A A C T G C G T A A C T G A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.606e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGCCCA-
TGACCTTTGCCCTA
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGCCCA--
TGACCTTTGMCCTNB
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGCCCA--
TGACCTTTGCCCTAN
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAACTCTGCCCA-
TGACCTTTGCCCCA
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGCCCA--
TGACCTCTGACCCCN
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGCCCA---
TGGACTTTGNNCTNTG
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NR1I3/MA1534.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAACTCTGCCCA
ATGAACTTT-----
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGCCCA-
TGACCTTTGACCTC
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GAACTCTGCCCA--
-----CTGCCCGCA
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GAACTCTGCCCA--
-----ATGCCCACC
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C