Information for 18-AAAAGCACCATG (Motif 19)

C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.455e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAAGCACCATG---------
-GAAGTANCACGAATNMRAGT
C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

SOX18/MA1563.1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAAAGCACCATG-
-----CACAATGC
C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAAAGCACCATG---------
-TCAGCACCATGGACAGCTCC
C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AAAAGCACCATG---
----AAACAATGGCA
C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:-10
Orientation:reverse strand
Alignment:----------AAAAGCACCATG---
CACAAGGGARWARGRCACCATGAGG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T
T A G C T G C A G T A C C T G A C T G A T A C G C T A G C T A G C T G A T C A G C G A T T C G A C T G A C T A G T C A G A G T C C G T A A G T C G T A C C T G A C G A T A C T G C T G A C T A G A T C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAAAGCACCATG--
CATAAGACCACCATTAC
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

SCRT2/MA0744.2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAAAGCACCATG-----
-AAAGCAACAGGTGGTT
C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAAAGCACCATG---------
TTCAGCACCATGGACAGCGCC
C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

ZNF341/MA1655.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AAAAGCACCATG
GGGAACAGCCAC---
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AAAAGCACCATG---
----AAACAATGGAA
C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A