Information for 8-GCCCAAAGCG (Motif 29)

A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C G T A C G T A C T G A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.145e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background119.2 +/- 82.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCCAAAGCG
AGCCTCAGGCA
A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCCCAAAGCG
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZNF449/MA1656.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCCCAAAGCG
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAAAGCG--
TGCCCTNAGGGCA
A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCCAAAGCG
NTGGCCAATGAG
A C G T A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCCAAAGCG
CTGCCCGCA---
A C G T A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCCAAAGCG-
GCCGCGCAGTGCGT
A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCAAAGCG
AAAACAAAGAA
A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCCAAAGCG-----
-ACGAAAGCGAAAGT
A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAAAGCG
GGAACAAAGR-
A C G T A C T G A G T C A G T C A G T C C G T A C G T A C G T A A C T G A G T C A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T