Information for 23-CCATCACCTAGG (Motif 37)

A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C T G C G T A A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.595e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCATCACCTAGG-
NNGGCGACACCTCNNN
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCATCACCTAGG
GGCCATTAAC----
A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCATCACCTAGG---
NNNNATGACCTTGANTN
A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCATCACCTAGG
TGACCTTGACCT---
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCATCACCTAGG
TGACCTTGACCT---
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCATCACCTAGG-
NNNTCCATCCCATAANN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCATCACCTAGG
-TGACACCT---
A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCATCACCTAGG-
--CCCACCTGCGC
A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G A C G T
A C G T A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

FIGLA/MA0820.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCATCACCTAGG
--ACCACCTGTT
A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G
A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCATCACCTAGG
--ATGACCTTGA
A G T C A G T C C G T A A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C T G A C T G
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A