Information for 3-GAAGCAACGA (Motif 25)

A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A C G T A C T G A G T C A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.161e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background121.8 +/- 84.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GAAGCAACGA
NTAGCAACG-
A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCAACGA
NGAAGC-----
A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GAAGCAACGA-
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAAGCAACGA-
TACCATAGCAACGGT
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAAGCAACGA
MTGATGCAAT--
A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAAGCAACGA
ATGATGCAAT--
A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------GAAGCAACGA-----
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

OSR2/MA1646.1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCAACGA
AAACAGAAGCAG---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAAGCAACGA----
--AGAAACGAAAGT
A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAGCAACGA
NATGTTGCAA---
A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A C G T A A G T C A C T G C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T