Information for 15-AGCAAGCTTGGC (Motif 19)

C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:AGCAAGCTTGGC
--CAAGCTT---
C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AGCAAGCTTGGC---
----TACTTGGCAGA
C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:AGCAAGCTTGGC---
------NTTGGCANN
C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGCAAGCTTGGC---
-----NNTTGGCANN
C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAGCTTGGC
TCAGNGAGCGTGAC
A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGCAAGCTTGGC--
------CTTGGCAA
C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

ZFP42/MA1651.1/Jaspar

Match Rank:7
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------AGCAAGCTTGGC--
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCAAGCTTGGC-----
-NGTAGGTTGGCATNNN
C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCAAGCTTGGC---
GTCATGCHTGRCTGS
C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ETV4/MA0764.2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGCTTGGC
ACAGGAAGTG----
A C G T A C G T C G T A A C T G A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C T G A C T G A G T C
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T A C G T A C G T