| p-value: | 1e-13 |
| log p-value: | -3.127e+01 |
| Information Content per bp: | 1.883 |
| Number of Target Sequences with motif | 8.0 |
| Percentage of Target Sequences with motif | 0.88% |
| Number of Background Sequences with motif | 4.7 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 104.0 +/- 45.7bp |
| Average Position of motif in Background | 131.8 +/- 58.2bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GCTCATCAAAAC- AAAGCTCGTAAAATTT |
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HOXC13/MA0907.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GCTCATCAAAAC GCTCGTAAAAA- |
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PH0048.1_Hoxa13/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GCTCATCAAAAC- AAACCTCGTAAAATTT |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GCTCATCAAAAC NCYAATAAAA-- |
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HOXC10/MA0905.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GCTCATCAAAAC -GTCGTAAAAT- |
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|
|
POU6F2/MA0793.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GCTCATCAAAAC AGCTCATTAT--- |
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PB0121.1_Foxj3_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GCTCATCAAAAC------ -AACACCAAAACAAAGGA |
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NKX6-3/MA1530.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GCTCATCAAAAC -CTCATTAAA-- |
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POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GCTCATCAAAAC NNCTCATTAT--- |
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Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GCTCATCAAAAC -CYHATAAAAN- |
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