Information for 6-YACACTTATAGT (Motif 8)

G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
Reverse Opposite:
C G T A A G T C A G C T T C G A A C G T C G T A C G T A A C T G A C G T T A C G A C G T C T A G
p-value:1e-5
log p-value:-1.372e+01
Information Content per bp:1.743
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif14.81%
Number of Background Sequences with motif113.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets102.4 +/- 40.7bp
Average Position of motif in Background105.0 +/- 63.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-2/MA0122.3/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---YACACTTATAGT
ATAACCACTTAAA--
A C G T A C G T A C G T G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:YACACTTATAGT
ACCACTTAA---
G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:YACACTTATAGT
-GCACTTAA---
G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:YACACTTATAGT
ACCACTTGAA--
G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YACACTTATAGT
-CCACTTGAA--
G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---YACACTTATAGT-
TAAGCCACTTAACATT
A C G T A C G T A C G T G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----YACACTTATAGT-
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-YACACTTATAGT
AAGCACTTAA---
A C G T G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T A C G T

ETV3/MA0763.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:YACACTTATAGT
--CACTTCCGGT
G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T
A C G T A C G T A G T C T C G A A G T C C G A T C A G T G T A C G T A C C T A G C T A G A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----YACACTTATAGT-
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C G T G A C T T C G A A G T C C G T A A G T C A C G T A C G T G T C A A C G T C T G A T A C G A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T