Information for 13-TAGGGTGRTCTC (Motif 18)

A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
Reverse Opposite:
A C T G C G T A A T C G C T G A A G T C A G T C C G T A A G T C A G T C A T G C A C G T C T G A
p-value:1e-10
log p-value:-2.316e+01
Information Content per bp:1.933
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets92.3 +/- 53.3bp
Average Position of motif in Background97.4 +/- 47.5bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)3.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAGGGTGRTCTC
YSTGGGTGGTCT-
A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAGGGTGRTCTC---
NNANTGGTGGTCTTNNN
A C G T A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TAGGGTGRTCTC
CGTGGGTGGTCC-
A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAGGGTGRTCTC
NTCGGTGGTCGC
A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

ZBTB7B/MA0694.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TAGGGTGRTCTC
TTCGGTGGTCGC
A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGTGRTCTC
GTGGGGTGAT---
A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

GLI3/MA1491.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TAGGGTGRTCTC
CGNCGTGGGTGGTCN-
A C G T A C G T A C G T A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAGGGTGRTCTC
ATGGGGTGAT---
A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T A C G T

GLI2/MA0734.2/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TAGGGTGRTCTC
CGNCGTGGGTGGTCN-
A C G T A C G T A C G T A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGGGTGRTCTC
ATGGGGTGAT---
A C G T A G C T C G T A A T C G A C T G A C T G A C G T A C T G C T A G A G C T A T G C A C G T A G T C
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T