Information for 9-CCGTGAGAGT (Motif 24)

A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C T G
p-value:1e-3
log p-value:-7.890e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background144.9 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCGTGAGAGT-
NNNACCGAGAGTNNN
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CCGTGAGAGT
NAGNTCTCGCGAGAN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGTGAGAGT--
--GTGAGTGNAC
A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGAGAGT
VTGYGKGGGAGK
A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGAGAGT
GAAAGTGAAAGT
A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCGTGAGAGT--
-CTTGAGTGGCT
A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGTGAGAGT
NCGTGACN--
A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGTGAGAGT-
NGCGTGGGCGGR
A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGAGAGT
TCTCGCGAGAAT
A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CCGTGAGAGT-
GNNACCGAGAATNNN
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T