Information for 3-CAGCCCTT (Motif 23)

A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
Reverse Opposite:
G T C A C T G A C T A G C T A G C T A G A G T C A C G T A C T G
p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.787
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif10.77%
Number of Background Sequences with motif1514.3
Percentage of Background Sequences with motif3.31%
Average Position of motif in Targets109.3 +/- 47.8bp
Average Position of motif in Background101.1 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CAGCCCTT
TCAGTCTT-
A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGCCCTT
CACAGN----
A C G T A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAGCCCTT
CAGCC---
A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCCTT
BCAGACWA-
A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCCTT
CNAGGCCT-
A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGCCCTT
GGGAACAGCCAC-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGCCCTT
CAGCTGTT
A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAGCCCTT
ATGCCAGACN--
A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

MAFG/MA0659.2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAGCCCTT---
GAGTCAGCATTTTTT
A C G T A C G T A C G T A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T A C G T A C G T A C G T
C T A G C G T A T A C G C G A T G T A C C G T A A C T G G A T C C G T A C G A T G C A T G C A T G A C T G A C T G C A T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCCTT-
CCAGCTGTTN
A C G T A G T C C G T A C T A G A G T C A G T C A G T C A G C T A C G T A C G T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A