Information for 23-GCAAGCTAGGAT (Motif 23)

A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C T G A G T C
p-value:1e-5
log p-value:-1.182e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCAAGCTAGGAT------
--CTACTAGGATGTNNTN
A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAAGCTAGGAT
-CAAGCTT----
A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGCTAGGAT--
GTCAACCAAGAATTC
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

Mecom/MA0029.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCAAGCTAGGAT----
--AAGATAAGATAACA
A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAAGCTAGGAT--
RGSMTBCTGGGAAAT
A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

GATA6/MA1104.2/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCAAGCTAGGAT--
-NNAGATAAGATAN
A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

BCL6/MA0463.2/Jaspar

Match Rank:7
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCAAGCTAGGAT--
ATGCTTTCGAGGAATT
A C G T A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
G C T A G A C T C T A G G T A C G C A T A C G T G C A T A G T C A C T G G C T A C T A G A C T G C T G A C G T A G A C T C A G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCAAGCTAGGAT
TBGCACGCAA----
A C G T A C G T A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

PB0115.1_Ehf_2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:GCAAGCTAGGAT------
--AAGATCGGAANTNNNA
A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.48
Offset:7
Orientation:reverse strand
Alignment:GCAAGCTAGGAT---
-------NGGATTAN
A C T G A G T C C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T