Information for 10-AAAAACCCTAAA (Motif 15)

G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A
Reverse Opposite:
C A G T C A G T G C A T C G T A C T A G C A T G C A T G A C G T A G C T A G C T C A G T C G A T
p-value:1e-9
log p-value:-2.109e+01
Information Content per bp:1.707
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif168.5
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets97.8 +/- 47.7bp
Average Position of motif in Background103.2 +/- 51.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.86
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAAACCCTAAA--
AAAAACCATTAAGG
G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAAACCCTAAA
AAAAAATCAATAAT
A C G T A C G T G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

BARX2/MA1471.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAAACCCTAAA
AAAAACCATTAC
G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A
C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AAAAACCCTAAA---
---NGYCATAAAWCH
G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

RUNX3/MA0684.2/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AAAAACCCTAAA-
-AAAACCTCAAAT
G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A A C G T
A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------AAAAACCCTAAA
GTTAAAAAAAAAAATTA-
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAAACCCTAAA-----
-AGAGCCATAAAATTCG
G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAAAACCCTAAA
--AAACMATTAN
G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A
A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAAAACCCTAAA-
---VGCCATAAAA
G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A A C G T
A C G T A C G T A C G T T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

Prdm15/MA1616.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAAACCCTAAA-
AGGAAAACCTGGAGC
A C G T A C G T G C T A G T C A C T G A T C G A T G C A G T A C G T A C G A T C G C A T C G T A G T C A G T C A A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C