Information for 14-VAGTGTDAACTG (Motif 20)

T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
Reverse Opposite:
A T G C G T C A A T C G C G A T A C G T G A T C C G T A A T G C C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-9.718e+00
Information Content per bp:1.741
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif722.9
Percentage of Background Sequences with motif0.81%
Average Position of motif in Targets113.2 +/- 55.2bp
Average Position of motif in Background102.6 +/- 86.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:VAGTGTDAACTG
AGGTGTGAAM--
T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:VAGTGTDAACTG
AGGTGTTAAT--
T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:VAGTGTDAACTG
AGGTGTGAAA--
T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-VAGTGTDAACTG
AAGGTGTKAA---
A C G T T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-VAGTGTDAACTG
AAGGTGTGAAA--
A C G T T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T

TBX6/MA1567.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-VAGTGTDAACTG
GAGGTGTGAA---
A C G T T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:VAGTGTDAACTG
AGGTGTGAAA--
T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-VAGTGTDAACTG
AAGGTGTGAA---
A C G T T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-VAGTGTDAACTG
TAGGTGTGAAG--
A C G T T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:VAGTGTDAACTG
AGGTGTGA----
T A G C C G T A A C T G A C G T A T C G C G A T C A T G C G T A C G T A A T G C A C G T A T C G
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T