| p-value: | 1e-4 |
| log p-value: | -9.622e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 0.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 29.0 +/- 0.0bp |
| Average Position of motif in Background | 33.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TCTTTTGATTAC-- --NTTTCATTRCHD |
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HOXA10/MA0899.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TCTTTTGATTAC- --NTTTTATTACN |
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FOXN3/MA1489.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | TCTTTTGATTAC ----TTGTTTAC |
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|
|
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TCTTTTGATTAC- ---TTTCATTRCC |
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|
|
PH0046.1_Hoxa10/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCTTTTGATTAC--- TNAATTTTATTACCTN |
|
|
|
PB0016.1_Foxj1_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCTTTTGATTAC--- NNNNTTTGTTTACNNT |
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|
|
HOXD9/MA0913.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TCTTTTGATTAC --NTTTTATTGC |
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|
|
Foxj3/MA0851.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCTTTTGATTAC----- NNNTTTGTTTACNTTNN |
|
|
|
PB0017.1_Foxj3_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCTTTTGATTAC----- NNNTTTGTTTACNTTNN |
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|
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PHOX2B/MA0681.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCTTTTGATTAC- NNATAATTTGATTANN |
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