Information for 15-CCATTCTR (Motif 38)

A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A C T A G C G T A C T G A A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.664e+00
Information Content per bp:1.875
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif6.38%
Number of Background Sequences with motif1833.9
Percentage of Background Sequences with motif3.94%
Average Position of motif in Targets90.9 +/- 57.8bp
Average Position of motif in Background100.9 +/- 60.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCATTCTR-
NNCCATTGTNN
A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----CCATTCTR----
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCATTCTR-
NNCCATTGTNN
A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CCATTCTR-
NNGCACCTTTCTCC
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCATTCTR
GCNGCCATCTTG
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCATTCTR
MRSCACTYAA
A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCATTCTR---
TAACCACTCAAGAA
A C G T A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCATTCTR--
CCATTGTTYB
A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCATTCTR-
NCCATTGTTY
A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

ZFP42/MA1651.1/Jaspar

Match Rank:10
Score:0.66
Offset:-9
Orientation:reverse strand
Alignment:---------CCATTCTR----
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G C T A C G T A G T C A C G T C T A G A C G T A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C