Information for 7-CYYMCARMCATM (Motif 9)

A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A
Reverse Opposite:
A C G T C G T A A C G T A C T G A C T G A G C T A C G T A C T G A C G T C T A G C T G A A C T G
p-value:1e-6
log p-value:-1.384e+01
Information Content per bp:1.818
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif94.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets115.7 +/- 22.1bp
Average Position of motif in Background109.7 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CYYMCARMCATM---
CAAATCCAGACATCACA
A C G T A C G T A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CYYMCARMCATM
---BCAGACWA-
A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CYYMCARMCATM
CGCCCCCTGACA--
A C G T A C G T A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CYYMCARMCATM
---CCAATCAA-
A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CYYMCARMCATM
---CCAGACAG-
A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CYYMCARMCATM-
---CCAGACRSVB
A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CYYMCARMCATM-------
--CCNNACCATCTGGCCTN
A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CYYMCARMCATM-----
-----AAACATATGTTT
A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

YY2/MA0748.2/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CYYMCARMCATM-
--CGCCGCCATNN
A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A A C G T
A C G T A C G T A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CYYMCARMCATM
MCTCCCMCRCAB-
A C G T A G T C A G C T A G T C G T C A A G T C C G T A C T G A G T A C A G T C C G T A A C G T G T C A
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T A C G T