Information for 10-AGATATAAAGCT (Motif 13)

C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.953e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets152.0 +/- 0.0bp
Average Position of motif in Background166.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGATATAAAGCT
GACAGAGATATCAGTGT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGATATAAAGCT--
NAGATWNBNATCTNN
A C G T C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGATATAAAGCT---
AGATGKDGAGATAAG
C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGATATAAAGCT
NGYCATAAAWCH
C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGATATAAAGCT-
TCTTTATATATAAATA
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AGATATAAAGCT--
-------AAGCTTG
C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

CDX1/MA0878.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGATATAAAGCT
GGCCATAAAAC-
C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGATATAAAGCT-
ANNNGGATATATCCNNN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGATATAAAGCT
AGATAAGANN--
C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T
C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGATATAAAGCT
AGATAASR----
C G T A A C T G C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C A C G T
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T