Information for 2-ATCACAATAG (Motif 3)

C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G
Reverse Opposite:
T G A C C G A T C T G A G C A T A C G T T A C G A C G T C T A G C T G A A C G T
p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.839
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif395.6
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets83.4 +/- 50.5bp
Average Position of motif in Background100.9 +/- 60.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX15/MA1152.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATCACAATAG
AAAACAATAG
C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATCACAATAG-
--GACAATGNN
C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

SOX8/MA0868.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCACAATAG
AGAACAATGG
C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

PB0073.1_Sox7_1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ATCACAATAG-------
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATCACAATAG
RNAACAATGG
C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCACAATAG---
CTCACACAATGGCGC
A C G T A C G T C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATCACAATAG--
NNTNANAACAATTNNA
A C G T A C G T A C G T A C G T C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATCACAATAG-
BMRVACAAWGGV
A C G T C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G A C G T
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATCACAATAG----
TAGTGAACAATAGATTT
A C G T A C G T A C G T C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATCACAATAG--
TATAATTATAATATTC
A C G T A C G T A C G T A C G T C G T A A G C T A G T C C G T A A T G C G T C A C G T A G A C T C G T A A C T G A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C