Information for 2-CAAAGATAMACG (Motif 2)

A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T A C G T C G T A A C G T T A G C A C G T A C G T A C G T C T A G
p-value:1e-7
log p-value:-1.841e+01
Information Content per bp:1.894
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.0 +/- 40.6bp
Average Position of motif in Background99.1 +/- 83.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:CAAAGATAMACG--
----GCTAAACGGT
A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

TCF7L1/MA1421.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAAGATAMACG-
-AAAGATCAAAGG
A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G A C G T
A C G T G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAAAGATAMACG
ATGCTAAAAATAGAA-
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAAAGATAMACG
DCYAAAAATAGM--
A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAAAGATAMACG-
-----CTAAACGG
A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

Stat2/MA1623.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAAGATAMACG
AGAAACAGAAACT
A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

MEF2A/MA0052.4/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAAAGATAMACG
TTCTAAAAATAGAAA
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

FOXF2/MA0030.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAAGATAMACG--
CAAACGTAAACAAT
A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

LEF1/MA0768.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAAAGATAMACG----
-AAAGATCAAAGGGTT
A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAAAGATAMACG-
-WWATRTAAACAN
A G T C C G T A C G T A C G T A A C T G C G T A A C G T C G T A G T A C C G T A A G T C A C T G A C G T
A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A