Information for 4-AGTKAGTTGTGV (Motif 4)

C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C
Reverse Opposite:
A C T G G A T C G T C A G A T C C G T A C G T A A G T C G A C T T G A C C G T A G T A C A C G T
p-value:1e-5
log p-value:-1.269e+01
Information Content per bp:1.664
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif1312.9
Percentage of Background Sequences with motif2.13%
Average Position of motif in Targets73.3 +/- 40.5bp
Average Position of motif in Background101.3 +/- 75.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTKAGTTGTGV
-NNCAGTTGNN-
C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C
A C G T C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGTKAGTTGTGV
NNNTTAATTGGTTTTN-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTKAGTTGTGV
TGTCGGTT----
C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGTKAGTTGTGV---
GTNTTGTTGTGANNT
C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGTKAGTTGTGV----
NNCTTTGTTTTGNTNNN
A C G T C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTKAGTTGTGV----
-NNNTGTTGTTGTTNG
C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C A C G T A C G T A C G T A C G T
A C G T C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGTKAGTTGTGV
GNATTAATTAGTTNNC-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGTKAGTTGTGV
GNNTTAATTGGTTGTT-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGTKAGTTGTGV---
NNTTTTGTTTTGATNT
A C G T C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PH0092.1_Lhx2/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------AGTKAGTTGTGV
NNNNNCTAATTAGTTTA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G A T A C G T C G T A A C T G A C G T C G A T C T A G A C G T C T A G T A G C
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A A C G T A C G T