Information for 13-TTTTCKRG (Motif 37)

A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G
Reverse Opposite:
A G T C A G T C G T C A A C T G C T G A C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.816e+00
Information Content per bp:1.823
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.80%
Number of Background Sequences with motif1347.1
Percentage of Background Sequences with motif2.78%
Average Position of motif in Targets96.9 +/- 52.9bp
Average Position of motif in Background100.7 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC13/MA0907.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCKRG-
NTTTTACGAGN
A C G T A C G T A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

STAT1/MA0137.3/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTCKRG---
TTTCCTGGAAA
A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T A C G T A C G T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----TTTTCKRG----
ANATTTTACGAGNNNN
A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTTTCKRG-------
TTTCCTGGAAAGNNN
A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TTTTCKRG-
ATTTCCTGTN
A C G T A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

STAT3/MA0144.2/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTCKRG---
TTTCCCAGAAN
A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T A C G T A C G T
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TTTTCKRG---
NNNTTTCCTGGAAA
A C G T A C G T A C G T A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T A C G T A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTTCKRG---
NTTTCCNGGAAA
A C G T A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T A C G T A C G T
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCKRG-
ATTTCCTGTN
A C G T A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTTCKRG----
NATTTCCNGGAAAT
A C G T A C G T A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G A C G T A C G T A C G T A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T