| p-value: | 1e-6 |
| log p-value: | -1.426e+01 |
| Information Content per bp: | 1.974 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.40% |
| Number of Background Sequences with motif | 0.6 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 117.4 +/- 40.5bp |
| Average Position of motif in Background | 101.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 1.8 |
| Multiplicity (# of sites on avg that occur together) | 3.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGATAGATGGCA TGATKGATGR-- |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGATAGATGGCA ATGATKGATGRC- |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 3 |
| Score: | 0.75 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGATAGATGGCA TGATTRATGGCY |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGATAGATGGCA TGATTGATGA-- |
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NEUROD1/MA1109.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGATAGATGGCA- GGACAGATGGCAG |
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|
TGIF2/MA0797.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGATAGATGGCA TGACAGCTGTCA |
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|
PKNOX2/MA0783.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGATAGATGGCA TGACAGGTGTCA |
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MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TGATAGATGGCA NNTGATTGATGNN- |
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TGIF1/MA0796.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGATAGATGGCA TGACAGCTGTCA |
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|
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer
| Match Rank: | 10 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGATAGATGGCA RTGATTKATRGN- |
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