Information for 13-TAMCATCCTAAC (Motif 16)

A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C T G A A C T G C T A G G T C A C G A T A C T G A C G T A C G T C G T A
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.812
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif34.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets104.5 +/- 51.2bp
Average Position of motif in Background103.3 +/- 45.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAMCATCCTAAC--
GATAACATCCTAGTAG
A C G T A C G T A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

ZNF449/MA1656.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAMCATCCTAAC---
-CCAAGCCCAACCAG
A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T A C G T A C G T
A C G T G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

NR1D2/MA1532.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAMCATCCTAAC--
NTGACCCACTAACCC
A C G T A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAMCATCCTAAC------
-AACACCAAAACAAAGGA
A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

RFX5/MA0510.2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TAMCATCCTAAC-
CGTTGCCATGGCAACG
A C G T A C G T A C G T A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T
A T G C C T A G A G C T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T G C A G A T C T A C G

MAFF/MA0495.3/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TAMCATCCTAAC--
NNNAAAATGCTGACTN
A C G T A C G T A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T A C G T
C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C A T T C A G G T A C G C A T C A T G G C T A A T G C G C A T G A C T

RFX2/MA0600.2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TAMCATCCTAAC-
CGTTGCCATGGCAACG
A C G T A C G T A C G T A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G

RFX3/MA0798.2/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAMCATCCTAAC--
TNCCATAGCAACNN
A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TAMCATCCTAAC-
TTGCCATGGCAACC
A C G T A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TAMCATCCTAAC---
NNNTCCATCCCATAANN
A C G T A C G T A C G T T G C A G T C A T G A C C G T A A C G T A G T C A G T C A G C T C G T A C G T A A G T C A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A