Information for 6-CATAGCATCTAC (Motif 6)

A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G C G T A A C G T A C T G A T G C A C G T C T G A A C G T A C T G
p-value:1e-7
log p-value:-1.758e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif460.7
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets94.2 +/- 30.6bp
Average Position of motif in Background100.5 +/- 84.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX1/MA0509.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CATAGCATCTAC
TNCCATAGCAACNN-
A C G T A C G T A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATAGCATCTAC
TACCATAGCAACGGT
A C G T A C G T A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

RFX3/MA0798.2/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATAGCATCTAC
TNCCATAGCAACNN-
A C G T A C G T A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CATAGCATCTAC----
NNNNNCGATANNATCTNNNNAN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C A G T C G T A C G T A T A C G A G C T G A T C C T A G T C G A A G C T C T G A T G C A C G T A C T G A C A G T G A T C C G A T T C G A A G T C G C T A C G T A T G C A C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATAGCATCTAC
CCGCATAGCAACGGA
A C G T A C G T A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CATAGCATCTAC----
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CATAGCATCTAC
SCCTAGCAACAG-
A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CATAGCATCTAC-
NNNNNBAGATAWYATCTVHN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CATAGCATCTAC-
---NNCATCTGNN
A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

Ptf1a/MA1618.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATAGCATCTAC--
-NNAACATCTGTNN
A G T C G T C A A G C T C G T A A T C G A G T C G T C A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
A C G T C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T