| p-value: | 1e-10 |
| log p-value: | -2.379e+01 |
| Information Content per bp: | 1.666 |
| Number of Target Sequences with motif | 34.0 |
| Percentage of Target Sequences with motif | 4.66% |
| Number of Background Sequences with motif | 577.2 |
| Percentage of Background Sequences with motif | 1.20% |
| Average Position of motif in Targets | 92.6 +/- 52.4bp |
| Average Position of motif in Background | 99.6 +/- 57.3bp |
| Strand Bias (log2 ratio + to - strand density) | -0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.03 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORB/MA1150.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATTCAGGTCAMA AATTAGGTCAC- |
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|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTCAGGTCAMA-- AAWCTAGGTCARDNN |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATTCAGGTCAMA AAYTAGGTCA-- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATTCAGGTCAMA AAYTAGGTCA-- |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATTCAGGTCAMA ATCAAGGTCA-- |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATTCAGGTCAMA TATAAGTAGGTCAA- |
|
|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 7 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTCAGGTCAMA WAABTAGGTCAV- |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATTCAGGTCAMA ATAAGTAGGTCA-- |
|
|
|
PB0178.1_Sox8_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATTCAGGTCAMA ACATTCATGACACG |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATTCAGGTCAMA --TRAGGTCA-- |
|
|
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