| p-value: | 1e-4 |
| log p-value: | -9.808e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 20.00% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 129.0 +/- 0.0bp |
| Average Position of motif in Background | 148.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NFIC/MA0161.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGGTTGCCAAGT- --NNTGCCAAGNN |
|
|
|
NFIA/MA0670.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.73 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGGTTGCCAAGT --GGTGCCAAGT |
|
|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 3 |
| Score: | 0.72 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGGTTGCCAAGT ---TTGCCAAG- |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGGTTGCCAAGT-- NNCGTTGCTATGGNN |
|
|
|
NFIX/MA0671.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGGTTGCCAAGT --CGTGCCAAG- |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGGTTGCCAAGT-- NCCGTTGCTANGNGN |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.68 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GGGTTGCCAAGT------ NTNNNNNGTTGCTANGGNNCANA |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 8 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGGTTGCCAAGT CTGTTGCTAGGS |
|
|
|
RFX1/MA0509.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGTTGCCAAGT-- CTGTTGCTATGGCA |
|
|
|
RFX3/MA0798.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGTTGCCAAGT-- CGGTTGCTATGGCA |
|
|
|