Information for 6-AAGGAACAARTG (Motif 6)

C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C G T C T A G A C G T A C G T A G T C A G T C A C G T A C G T
p-value:1e-14
log p-value:-3.273e+01
Information Content per bp:1.870
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.8 +/- 43.3bp
Average Position of motif in Background105.1 +/- 55.0bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0093.1_Zfp105_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGGAACAARTG
AACAAACAACAAGAG
A C G T A C G T A C G T C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGGAACAARTG-
AAAAATAACAAACGG
A C G T A C G T C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGGAACAARTG---
NNNNNGAACAATTGANN
A C G T A C G T C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGGAACAARTG-
---GAACAATGGN
C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G A C G T
A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGGAACAARTG
--AAAACAAAGG
C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGGAACAARTG
--RNAACAATGG
C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGGAACAARTG
--GGAACAAAGR
C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G
A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGGAACAARTG----
AATGAACAATGGAATT
C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

SCRT2/MA0744.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGGAACAARTG---
AAAGCAACAGGTGGTT
A C G T C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G A C G T A C G T A C G T
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGGAACAARTG-------
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T C G T A C G T A A C T G C T A G C G T A C G T A A G T C C G T A G T C A C T A G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A