Information for 2-AGCATATKKYTM (Motif 2)

C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
Reverse Opposite:
A C T G C G T A C T G A G T A C G T C A C G T A A C G T C G T A A C G T C T A G A G T C A C G T
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.866
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif44.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets108.0 +/- 35.9bp
Average Position of motif in Background107.2 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE23/MA0817.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AGCATATKKYTM
NAACATATGTTT-
A C G T C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:2
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:AGCATATKKYTM
ANCATATGGT--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:AGCATATKKYTM
ANCATATGGT--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGCATATKKYTM
AACATATGTT--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGCATATKKYTM
ACCATATGGT--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T A C G T

ATOH7/MA1468.1/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGCATATKKYTM
AACATATGTC--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCATATKKYTM
ANCATATGTT--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:8
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGCATATKKYTM
ACCATATGGC--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T

NEUROG1/MA0623.2/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGCATATKKYTM
GACATATGTC--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGCATATKKYTM
AACATATGTC--
C G T A A C T G A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G C T A C G T G T A C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T