Information for 13-TGAACTACCC (Motif 34)

A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T C G T A A C T G A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.111e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background137.9 +/- 36.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGAACTACCC
ATGAACTTT--
A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAACTACCC
TGAACTCA--
A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGAACTACCC--
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGAACTACCC
GGAAATTCCC
A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGAACTACCC
GGAAATCCCC
A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAACTACCC---
-GGACCACCCACG
A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

RELB/MA1117.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAACTACCC--
-GAATTCCCCGG
A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C A C G T A C G T
A C G T C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGAACTACCC
TTGAMCTTTG-
A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGAACTACCC
AGATGCAATCCC-
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGAACTACCC--
NNNNCAACCTTCGNGA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T C G T A A G T C A G T C A G T C A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A