Information for 2-CAAAAAGCACAG (Motif 5)

A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C T G
p-value:1e-4
log p-value:-9.625e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background137.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CAAAAAGCACAG-
---AAACCACAGC
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAAAAAGCACAG--
---AAATCACAGCA
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAAAAAGCACAG--
---AAACCACAGAN
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAAAAAGCACAG-
---AAACCACANN
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAAAAAGCACAG
--NAAACCACAG
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAAAAAGCACAG--
--NWAACCACADNN
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CAAAAAGCACAG-
-------CACAGN
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

GFI1/MA0038.2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAAAAAGCACAG--
--CAAATCACTGCA
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

TCF7L1/MA1421.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAAAAAGCACAG-
-AAAGATCAAAGG
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G A C G T
A C G T G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAAAAAGCACAG
--CCAGGAACAG
A G T C C G T A C G T A C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C T G
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G