Information for 13-CCTGTCTSMATC (Motif 16)

G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
Reverse Opposite:
C T A G C G T A G C A T C A G T A T C G C G T A A C T G C G T A A T G C C G T A C T A G C A T G
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.712
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif4.33%
Number of Background Sequences with motif501.7
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets108.9 +/- 54.9bp
Average Position of motif in Background101.7 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCTGTCTSMATC
VCCTCTCTGDDY-
A C G T G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCTGTCTSMATC
-CTGTCTGG---
G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTGTCTSMATC
VBSYGTCTGG---
A C G T G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTGTCTSMATC
TTCTTTCTCTT--
A C G T G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTGTCTSMATC--
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTGTCTSMATC
-TWGTCTGV---
G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGTCTSMATC
NNGCACCTTTCTCC---
A C G T A C G T A C G T A C G T A C G T G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTGTCTSMATC--
-CTGTCTGTCACCT
G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C A C G T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PRDM4/MA1647.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTGTCTSMATC
GTCTGTTTCTA--
A C G T G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTGTCTSMATC
--TGTCTAGA--
G T A C A G T C C G A T T A C G A C G T A G T C A C G T T A G C G T C A C G T A C G A T A G T C
A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T