Information for 4-CCRACTAT (Motif 21)

A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T
Reverse Opposite:
C T G A A C G T C G T A A C T G A C G T A G C T C T A G C T A G
p-value:1e-5
log p-value:-1.254e+01
Information Content per bp:1.773
Number of Target Sequences with motif216.0
Percentage of Target Sequences with motif8.13%
Number of Background Sequences with motif2791.2
Percentage of Background Sequences with motif5.95%
Average Position of motif in Targets96.2 +/- 57.5bp
Average Position of motif in Background99.6 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCRACTAT
CACCTACTAT
A C G T A C G T A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCRACTAT----
RGMCCTACTRTGTGC
A C G T A C G T A C G T A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T A C G T A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

LHX2/MA0700.2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCRACTAT-
AACCAATTAAT
A C G T A C G T A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T A C G T
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCRACTAT
CCAATTAA
A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

LHX9/MA0701.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCRACTAT
CTAATTAA
A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T
A G T C A G C T G T C A C G T A A C G T A C G T C T G A T C G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCRACTAT----
CGACCAACTGCCGTG
A C G T A C G T A C G T A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCRACTAT-
ACCAACTGTC
A C G T A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T A C G T
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

Nobox/MA0125.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCRACTAT
ACCAATTA-
A C G T A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T
T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T

PRRX2/MA0075.3/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCRACTAT
CTAATTAA
A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T
A G T C A G C T T G C A C G T A A C G T A C G T T C G A C T G A

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCRACTAT
-NAACAAT
A G T C G A T C T C G A C G T A G T A C A C G T G T C A A G C T
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T