Information for 13-TCATTAATGA (Motif 28)

A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A
p-value:1e-3
log p-value:-7.535e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif38.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets72.5 +/- 0.5bp
Average Position of motif in Background94.7 +/- 116.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0150.1_Pou4f3/Jaspar

Match Rank:1
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--TCATTAATGA----
AGTTATTAATGAGGTC
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TCATTAATGA
CTCATTAAA--
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TCATTAATGA----
AGTAATTAATTACTTC
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T C G A T C A G G A C T G C T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A A G T C A C G T G A C T A G T C

PH0019.1_Dbx2/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TCATTAATGA----
TTTAATTAATTAATTC
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TCATTAATGA
TCATCAATCA
A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

HOXB4/MA1499.1/Jaspar

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TCATTAATGA
ATCATTAG---
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A
T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TCATTAATGA
GTAATTAA---
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:8
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TCATTAATGA
GTCATTAA---
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A
T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T A C G T

PH0146.1_Pou3f1/Jaspar

Match Rank:9
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TCATTAATGA---
NANTTAATTAATTANNN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TCATTAATGA-----
NNAATTAATGACCNNN
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C