Information for 11-GACAGTCACTGA (Motif 21)

A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.476e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background189.2 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX3/MA1114.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GACAGTCACTGA---
NNNCCTGTCACTCANNN
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GACAGTCACTGA------
--CAATCACTGGCAGAAT
A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACAGTCACTGA
GSCTGTCACTCA
A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PKNOX1/MA0782.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACAGTCACTGA--
NNGCTGTCACTCANN
A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GACAGTCACTGA
---AGTCACGC-
A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GACAGTCACTGA
SCTGTCAVTCAV---
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GACAGTCACTGA-
-NCTGTCAATCAN
A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

MSANTD3/MA1523.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GACAGTCACTGA
GTACACTCAC---
A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACAGTCACTGA----
-AAGGTCANTGACCTT
A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GACAGTCACTGA
NNATTGACAGGTGCTT-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C T G C G T A
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T A C G T