Information for 9-ACACAGCAGCTA (Motif 13)

C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C T G A C G T
p-value:1e-3
log p-value:-9.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACACAGCAGCTA
AAACAGAAGCAG
C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACACAGCAGCTA-
CTCACAGCAGGGGG
A C G T C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

ZNF317/MA1593.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ACACAGCAGCTA
TAACAGCAGACT
C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAGCTA-
CCACACAGCAGGAGA
A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACACAGCAGCTA-
-CACAGCAGGGGG
C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAGCTA--
ATGTACAGTAGCAAAG
A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAGCTA--
ATTTACAGTAGCAAAA
A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

OSR1/MA1542.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACACAGCAGCTA
-NACAGTAGCN-
C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
A C G T G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACACAGCAGCTA
-CACAGCAGGGG
C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A
A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACACAGCAGCTA-
GAGCACAGCAGGACA
A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A