Information for 23-GTTCTTTGCACT (Motif 30)

A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G C G T A C G T A A G T C
p-value:1e-3
log p-value:-8.385e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background177.3 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTCTTTGCACT---
TGGACTTTGNNCTNTG
A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTCTTTGCACT-
NTGACCTTTGGACCC
A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G C A T A G C T C T A G C T A G G T C A G T A C A G T C A G T C

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTCTTTGCACT
-TACTTGGCAGA
A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTCTTTGCACT
--CCTTTGATGT
A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTCTTTGCACT--
TNCCTTTGATCTTN
A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTCTTTGCACT---
NNTTCCTTTGATCTNNA
A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTTCTTTGCACT
--CCTTTGATST
A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T
A C G T A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

TCF7/MA0769.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTTCTTTGCACT
-TCCTTTGATGT
A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T
A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTCTTTGCACT--
ANATTTTTGCAANTN
A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTCTTTGCACT--
TGACCTTTGMCCTNB
A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G