Information for 5-AAACGAGTAA (Motif 9)

G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A
Reverse Opposite:
G C A T A C G T C T G A A G T C A C G T A G T C A C T G A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.816e+01
Information Content per bp:1.902
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets75.3 +/- 54.4bp
Average Position of motif in Background95.7 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AAACGAGTAA--
NNTAAAAACGATGTTNT
A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAACGAGTAA---
TTGACCGAGAATTCC
A C G T A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAACGAGTAA
-ACCGATTAG
G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAACGAGTAA--
AAAAACCATTAAGG
A C G T A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAACGAGTAA
CTAAACGG----
A C G T A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T A C G T A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAACGAGTAA
TAATCGATTA-
A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A
C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAACGAGTAA
AAACMATTAN
G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

SPIC/MA0687.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAACGAGTAA---
AAAAAGAGGAAGTA
A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A A C G T A C G T A C G T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAACGAGTAA----
ATTTACGACAAATAGC
A C G T A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PH0006.1_Barhl2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAACGAGTAA---
AAAAACCAATTAAGAA
A C G T A C G T A C G T G T C A C G T A C G T A A G T C A C T G C G T A A C T G A G C T C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A