Information for 12-CCAGTTTCTCAT (Motif 12)

G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G C G T A A C T G C G T A C T G A C G T A A G T C A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.402e+01
Information Content per bp:1.947
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.2 +/- 37.0bp
Average Position of motif in Background76.4 +/- 88.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCAGTTTCTCAT
GTCTGTTTCTA--
A C G T G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCAGTTTCTCAT
-TTCTTTCTCTT
G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T
A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

Prdm15/MA1616.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTTTCTCAT
NNTCCAGGTTTTCCN
A C G T A C G T A C G T G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T
C T A G A G T C A C G T G A T C G A T C C T G A A C T G T C A G G A C T G A C T A G C T A G C T T G A C G A T C G A C T

SPIB/MA0081.2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCAGTTTCTCAT--
TTTCACTTCCTCTTTT
A C G T A C G T G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T A C G T A C G T
G A C T G A C T A G C T A T G C C G T A A T G C G C A T A C G T G A T C G A T C A G C T A G T C G C A T G A C T G A C T A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCAGTTTCTCAT-
---HTTTCCCASG
G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T A C G T
A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCAGTTTCTCAT--
NNNCCTGTCACTCANNN
A C G T A C G T A C G T G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCTCAT--
--ACTTTCACTTTC
G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGTTTCTCAT
-CACTTCCTCT-
G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T
A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCAGTTTCTCAT-
-CACTTCCYCTTT
G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T A C G T
A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCAGTTTCTCAT--
--AGTTTCAGTTTC
G T A C A G T C C G T A A C T G A C G T A G C T A C G T A G T C A C G T A G T C C G T A A G C T A C G T A C G T
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C