Information for 25-CTCTGGTTAT (Motif 33)

A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A G T C A G T C C G T A A C T G C G T A A C T G
p-value:1e-2
log p-value:-6.583e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif148.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background110.4 +/- 141.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTCTGGTTAT
GCTGTGGTTT-
A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTCTGGTTAT
CTGTGGTTTN
A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CTCTGGTTAT----
GAAAACTAGTTAACATC
A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTCTGGTTAT
GTCTGTGGTTT-
A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGGTTAT
NNTGTGGTTT-
A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

SIX1/MA1118.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGGTTAT
TATCAGGTTAC
A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGGTTAT
NNHTGTGGTTWN
A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGGTTAT
VCCTCTCTGDDY--
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCTGGTTAT----
--NTGTTTAYATWW
A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Foxf1/MA1606.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCTGGTTAT--
-NNTGTTTACAN
A G T C A C G T A G T C A C G T A C T G A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T