Information for 22-CATTATATTTCT (Motif 39)

A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.305e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background109.8 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CATTATATTTCT-
NANTATTATAATTNNN
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CATTATATTTCT-
NNTAATTATAATTNNN
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CATTATATTTCT-
NNTAATTATAATNANN
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CATTATATTTCT-
NCGTATTATAATCNTA
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTATATTTCT
CTCATTAAA-----
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CATTATATTTCT-----
--TTCTATTTTTAGNNN
A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CATTATATTTCT
NNCTCATTAT------
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATTATATTTCT----
-NNTCTATTTTTAGNN
A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATTATATTTCT--
TNAATTTTATTACCTN
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------CATTATATTTCT
GCAACCTCATTATNNNN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C G T A G T C A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T A C G T A C G T