Information for 5-CGATGGAC (Motif 28)

T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C
Reverse Opposite:
T A C G C A G T G T A C A T G C T C G A C G A T A T G C A C T G
p-value:1e-5
log p-value:-1.161e+01
Information Content per bp:1.711
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif380.0
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets114.8 +/- 53.3bp
Average Position of motif in Background95.4 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.59
Offset:-8
Orientation:reverse strand
Alignment:--------CGATGGAC
NNTTTANNCGACGNA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T

PH0044.1_Homez/Jaspar

Match Rank:2
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------CGATGGAC-
NNTAAAAACGATGTTNT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CGATGGAC
NTNATCGATA---
A C G T A C G T A C G T A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CGATGGAC
CACAATGC--
A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGATGGAC
TAATCGATAA--
A C G T A C G T A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CGATGGAC
TAATCGATAA--
A C G T A C G T A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGATGGAC
NTATYGATCH--
A C G T A C G T A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGATGGAC---
NTGATTGACAGN
A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C A C G T A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGATGGAC---
BTGABTGACAGS
A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C A C G T A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CGATGGAC----
GGGCGATGACCAYTC
A C G T A C G T A C G T T G A C A T C G C G T A A G C T T A C G C A T G G T C A A T G C A C G T A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C