Information for 9-TGCCAACGCAAC (Motif 14)

A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C T G A C T G A G T C C G T A
p-value:1e-4
log p-value:-9.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGCCAACGCAAC--
TNCCATAGCAACNN
A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAACGCAAC-
TTGCCATGGCAACN
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCCAACGCAAC
ATGCCAACC----
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCCAACGCAAC--
TNCCATAGCAACNN
A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAACGCAAC-
TTGCCATGGCAACC
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGCCAACGCAAC
GGTGCCAAGT----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

RFX5/MA0510.2/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGCCAACGCAAC-
NGTTGCCATGGCAACG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C A C G T
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGCCAACGCAAC
CGTGCCAAG-----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCCAACGCAAC
TGCCAGCB----
A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAACGCAAC--
GTTGCCATGGCAACCG
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C T G A G T C C G T A C G T A A G T C A C G T A C G T
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G