Information for 1-CTACAATT (Motif 20)

A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T
Reverse Opposite:
C G T A C T G A A C G T A C G T A C T G C G A T G T C A A C T G
p-value:1e-6
log p-value:-1.558e+01
Information Content per bp:1.918
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif4.02%
Number of Background Sequences with motif823.0
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets84.7 +/- 54.3bp
Average Position of motif in Background101.9 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CTACAATT-----
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CTACAATT---
ACTACAATTCCC
A C G T A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CTACAATT--
NNCNNAACAATTNT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Msx3/MA0709.1/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CTACAATT--
--CCAATTAA
A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

MSX1/MA0666.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTACAATT--
--CCAATTAG
A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTACAATT--
--CCAATTAA
A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

LHX2/MA0700.2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTACAATT---
AACCAATTAAT
A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

ALX3/MA0634.1/Jaspar

Match Rank:8
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTACAATT---
-TCTAATTAAA
A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T A C G T
A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

DLX5/MA1476.1/Jaspar

Match Rank:9
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTACAATT--
--GCAATTAC
A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C

Dlx2/MA0885.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTACAATT--
--GCAATTAA
A G T C A C G T C G T A A G T C C G T A C G T A A G C T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A