Information for 13-GGGTTAGGTA (Motif 28)

A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.836e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 0.0bp
Average Position of motif in Background99.2 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEF/MA0843.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGTTAGGTA---
-NGTTACGTAATN
A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGTTAGGTA
GGATTAGC--
A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

DBP/MA0639.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGTTAGGTA---
-NGTTACGTAATN
A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

PITX1/MA0682.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTAGGTA
NGGATTAN---
A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTAGGTA
GGGATTANN--
A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGGTTAGGTA
AAGGGATTAGAA-
A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTAGGTA
NNGGATTAGN--
A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGTTAGGTA-
---TTACGTAA
A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGGTTAGGTA-
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGGTTAGGTA-
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T C G T A A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A