Information for 4-GTGCGTGCCA (Motif 4)

A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A A G T C A C T G A G T C C G T A A G T C
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GTGCGTGCCA
TTGCGTGCVA
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTGCGTGCCA
-TGCGTG---
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTGCGTGCCA--
NNGCGTGTGTGCNGCN
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTGCGTGCCA
GGACGTGC--
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GTGCGTGCCA--
---CGTGCCAAG
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGCGTGCCA
-TACGTGCV-
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTGCGTGCCA
RTACGTGC--
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTGCGTGCCA---
---GGTGCCAAGT
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GTGCGTGCCA---
----ATGCCAACC
A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTGCGTGCCA-
RGTTAGTGCCCY
A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T