| p-value: | 1e-3 |
| log p-value: | -8.769e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 2.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 87.0 +/- 0.0bp |
| Average Position of motif in Background | 154.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NKX6-3/MA1530.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | CAAAATAATGAC ---TTTAATGAN |
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|
|
HOXA4/MA1496.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | CAAAATAATGAC ----NTAATGAC |
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|
|
POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CAAAATAATGAC-- ----ATAATGAGGT |
|
|
|
PH0118.1_Nkx6-1_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAAAATAATGAC---- GAAAATTAATTACTTCG |
|
|
|
PH0073.1_Hoxc9/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAAAATAATGAC---- NNAATTAATGACCNNN |
|
|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | CAAAATAATGAC ----NTAATGAN |
|
|
|
HOXB4/MA1499.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | CAAAATAATGAC ----NTAATGAT |
|
|
|
HOXD4/MA1507.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | CAAAATAATGAC ----NTAATGAN |
|
|
|
PH0152.1_Pou6f1_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAAAATAATGAC----- AAACATAATGAGGTTGC |
|
|
|
PH0120.1_Nkx6-3/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAAAATAATGAC---- GAAAATTAATTACTTTG |
|
|
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