Information for 1-TAAAATGAGG (Motif 4)

A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G
Reverse Opposite:
A G T C A T G C A C G T A G T C C G T A G A C T A C G T C G A T A C G T C G T A
p-value:1e-7
log p-value:-1.759e+01
Information Content per bp:1.919
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif243.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets125.8 +/- 51.2bp
Average Position of motif in Background94.0 +/- 89.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TAAAATGAGG----
AAACATAATGAGGTTGC
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAAAATGAGG-
-ATAATGAGGT
A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T
A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAAAATGAGG-
-NTAATGAGCT
A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TAAAATGAGG----
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TAAAATGAGG
TTTAATGAN-
A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TAAAATGAGG---
NNTNNACAATGGGANNN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

JUND(var.2)/MA0492.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAAATGAGG-----
AAAGATGATGTCATC
A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

JUN/MA0488.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAAAATGAGG----
-AAGATGATGTCAT
A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

ATF2/MA1632.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAAAATGAGG-----
--AAATGAGGTCATT
A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TAAAATGAGG
AATGCAATAAAATTTAT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C T G A A C G T A C T G C G T A A T C G A C T G
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T