Information for 18-CTGAATTGGTGC (Motif 29)

A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-8.289e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background138.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGAATTGGTGC-
GGACTGAATTCATGCC
A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTGAATTGGTGC
NNNTATTGAATTGNNN-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGAATTGGTGC--
NNNTTAATTGGTTTTT
A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PH0127.1_Nobox/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGAATTGGTGC-
GNTNNCTAATTAGNNCG
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T
T A C G C T G A C G A T C G T A T G A C A G T C G A C T C T G A C G T A G C A T A G C T C T G A T C A G A G T C A T C G T A G C A T C G

PH0005.1_Barhl1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGAATTGGTGC--
GNNTTAATTGGTTGTT
A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

Hmx1/MA0896.1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGAATTGGTGC-
ANNCATTAATTGCTNGN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGAATTGGTGC-
ANNCATTAATTGCTNGN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGAATTGGTGC
-NTAATTGG---
A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGAATTGGTGC--
NNNTTAATTGGTTTTN
A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

LHX2/MA0700.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGAATTGGTGC
NNTAATTGGNN-
A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C T G A G T C
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T A C G T