Information for 11-GCCCTGGACA (Motif 29)

A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.003e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background111.3 +/- 47.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCCTGGACA
WDNCTGGGCA
A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGGACA
TGACCTTGAN-
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

EBF1/MA0154.4/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTGGACA--
NNTCCCCTGGGGANN
A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C G T
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCCTGGACA
--TCTAGACA
A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCCTGGACA-
-CCAGGAACAG
A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGGACA-
TGACCTTGACCT
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

REST/MA0138.2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GCCCTGGACA-----
TTCAGCACCATGGACAGCGCC
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCCCTGGACA--
CYWSTGGTCARA
A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGGACA
TGACCTTGAV-
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GCCCTGGACA-----
TCAGCACCATGGACAGCTCC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C