Information for 3-CATCGTCA (Motif 24)

A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A
Reverse Opposite:
C G A T A C T G C T G A G A T C C A T G C G T A A G C T A T C G
p-value:1e-5
log p-value:-1.375e+01
Information Content per bp:1.786
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif11.29%
Number of Background Sequences with motif3214.4
Percentage of Background Sequences with motif6.68%
Average Position of motif in Targets100.4 +/- 56.0bp
Average Position of motif in Background100.0 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATCGTCA---
NTTATTCGTCATNC
A C G T A C G T A C G T A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A A C G T A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATCGTCA
CTCATTGTC-
A C G T A C G T A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

SOX18/MA1563.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATCGTCA
GCATTGTN-
A C G T A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A
A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CATCGTCA
--ACGTCA
A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

SOX2/MA0143.4/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATCGTCA
NNCCATTGTNN
A C G T A C G T A C G T A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

SOX13/MA1120.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATCGTCA
NNCCATTGTNN
A C G T A C G T A C G T A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

ESRRA/MA0592.3/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CATCGTCA--
GCTCAAGGTCACA
A C G T A C G T A C G T A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A A C G T A C G T
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

HOXA9/MA0594.2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CATCGTCA---
-GTCGTAAACG
A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A A C G T A C G T A C G T
A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATCGTCA--
TCAAGGTCATA
A C G T A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A A C G T A C G T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATCGTCA---
---AGTCACGC
A T G C T C G A A C G T G A T C C T A G G A C T A G T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G