Information for 11-ACTAGACAATAA (Motif 14)

C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T
p-value:1e-3
log p-value:-8.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background134.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACTAGACAATAA
TCTAGACA----
C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACTAGACAATAA-
----GACAATGNN
C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACTAGACAATAA
AATAAACAATN-
C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTAGACAATAA---
TCACGGAACAATAGGTG
A C G T A C G T C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SOX15/MA1152.1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTAGACAATAA
--AAAACAATAG
C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
A C G T A C G T C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACTAGACAATAA
-GTAAACAAT--
C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACTAGACAATAA
CGTCTAGACA----
A C G T A C G T C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ACTAGACAATAA
-BCAGACWA---
C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACTAGACAATAA
TGTCTAGACA----
A C G T A C G T C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACTAGACAATAA-
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A