| p-value: | 1e-3 |
| log p-value: | -8.994e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 10.00% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 41.0 +/- 0.0bp |
| Average Position of motif in Background | 62.3 +/- 43.6bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Atf1/MA0604.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGACGTAGAT ATGACGTA--- |
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MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGACGTAGAT TGACGT---- |
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PB0131.1_Gmeb1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AGACGTAGAT-- TGGGCGACGTCGTTAA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGACGTAGAT TGACCTARTT |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGACGTAGAT TGACCTARTT |
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|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AGACGTAGAT--- TTGACCTANTTATN |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AGACGTAGAT CCAGACRSVB-- |
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GMEB2/MA0862.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGACGTAGAT TTACGTAA-- |
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|
|
PH0066.1_Hoxc11/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AGACGTAGAT--- TAAAGTCGTAAAATAG |
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RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AGACGTAGAT- NNHYTGACCTAGWTT |
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