Information for 3-AGTAGGCCGG (Motif 6)

C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A G T C A G T C A C G T C G T A A G T C A C G T
p-value:1e-4
log p-value:-1.057e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets181.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGTAGGCCGG
ATAGTAGGTG--
A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTAGGCCGG
-CTAGGCCT-
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G
A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AGTAGGCCGG
GCACAYAGTAGGKCY-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGTAGGCCGG-
---AGGCCTNG
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGTAGGCCGG------
--CAGGCCNNGGCCNN
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

SP2/MA0516.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTAGGCCGG------
AAGTGGGCGGGGCTTAN
A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T A G A C G T C T A G T A C G C T A G A G T C T A C G A C T G A C T G C T A G A T G C C A G T C G A T T C G A A C T G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGTAGGCCGG---
-BTKGGCGGGAAA
C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

RORC/MA1151.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTAGGCCGG
ATAAGTAGGTCA-
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTAGGCCGG
CACAGCAGGGG--
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T

NR1D1/MA1531.1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AGTAGGCCGG
GGGTCAGTAGGTCAG
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A G T C A G T C A C T G A C T G
T C A G C A T G C T A G A C G T A G T C C G T A T A C G A C G T T C G A A C T G C T A G A C G T A G T C C T G A C T A G