| p-value: | 1e-3 |
| log p-value: | -6.987e+00 |
| Information Content per bp: | 1.872 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 0.19% |
| Number of Background Sequences with motif | 2.5 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 100.6 +/- 42.2bp |
| Average Position of motif in Background | 45.7 +/- 40.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 3.50 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | ACAAGTGATGGA--- -----TGATKGATGR |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | ACAAGTGATGGA---- ----ATGATKGATGRC |
|
|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACAAGTGATGGA--- NNNNNATTGATGNGTGN |
|
|
|
ATF4/MA0833.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACAAGTGATGGA---- --AAATGATGCAATAA |
|
|
|
TFE3/MA0831.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ACAAGTGATGGA -CACGTGAC--- |
|
|
|
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | ACAAGTGATGGA-- ----ATGATGCAAT |
|
|
|
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | ACAAGTGATGGA-- ----MTGATGCAAT |
|
|
|
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ACAAGTGATGGA DGCACACGTG----- |
|
|
|
PB0144.1_Lef1_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ACAAGTGATGGA----- -NNANTGATTGATNTTN |
|
|
|
PB0188.1_Tcf7l2_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ACAAGTGATGGA----- -NNANTGATTGATNNNN |
|
|
|