Information for 6-TTGBACCTGCAC (Motif 7)

A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
Reverse Opposite:
C T A G C A G T A C T G A G T C G T C A A T C G T C A G C G A T T A C G G T A C G T C A C G T A
p-value:1e-4
log p-value:-9.267e+00
Information Content per bp:1.720
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif393.1
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets108.0 +/- 59.4bp
Average Position of motif in Background101.9 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGBACCTGCAC-
CAGCACCTGCCCC
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF3/MA0522.3/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGBACCTGCAC
-CGCACCTGCCC
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
A C G T T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTGBACCTGCAC
-CGCACCTGCCG
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
A C G T T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

TCF4/MA0830.2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTGBACCTGCAC-
CGGCACCTGCCCC
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGBACCTGCAC
SNGCACCTGCHS
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTGBACCTGCAC
-TRCACCTGCY-
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGBACCTGCAC
-NGCACCTGCN-
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
A C G T G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTGBACCTGCAC
--GTACGTGCCC
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGBACCTGCAC
-CCCACCTGCGC
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C
A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGBACCTGCAC-----
NTNTATGTGCACATNNN
A C G T C A G T A C T G A G T C C G T A A G T C A T G C A C G T A C T G A G T C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A