Information for 13-ACTATAGTCACA (Motif 11)

C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T
p-value:1e-4
log p-value:-9.516e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ACTATAGTCACA----
------GTCACATGAY
C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----ACTATAGTCACA
NCGTATTATAATCNTA
A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

USF2/MA0526.3/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:ACTATAGTCACA------
----NNGTCACATGACNN
C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

DMRTA2/MA1478.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACTATAGTCACA--
--AATTGTTACATT
C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

USF1/MA0093.3/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACTATAGTCACA------
----NNGTCACATGACNN
C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACTATAGTCACA-
-----AGTCACGC
C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTATAGTCACA
--AAAAGTCAA-
C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:ACTATAGTCACA---
-------TCACACCT
C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACTATAGTCACA
GAACAATGG-----
A C G T A C G T C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACTATAGTCACA-
TNCCATAGCAACNN
A C G T C G T A A G T C A C G T C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G