Information for 7-AAACTTATTGTT (Motif 9)

C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
p-value:1e-4
log p-value:-9.453e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background133.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAACTTATTGTT-----
ANNTCTATTGTTCNNNA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AAACTTATTGTT-----
-AANTTATTGTTCTNNA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AAACTTATTGTT-----
-NNTTTATTGTTCTNNN
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

PB0073.1_Sox7_1/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AAACTTATTGTT-------
TNNANNTCTATTGTTNTNNANN
A C G T A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.70
Offset:6
Orientation:forward strand
Alignment:AAACTTATTGTT-
------ATTGTTA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AAACTTATTGTT------
----TAATTGTTCTAAAC
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAACTTATTGTT-----
GTATCTATTGTTCTTTA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AAACTTATTGTT------
-CNNNTATTGTTCNNNNN
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PB0173.1_Sox21_2/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAACTTATTGTT------
-AATCAATTGTTCCGCTA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.68
Offset:6
Orientation:forward strand
Alignment:AAACTTATTGTT
------ATTGTT
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T