Information for 22-TGCTATTTCAGG (Motif 22)

A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A G T C C G T A
p-value:1e-5
log p-value:-1.182e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TGCTATTTCAGG-
-GCTATTTTTGGM
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TGCTATTTCAGG
--CTATTTTTGG
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGCTATTTCAGG-
-KCTATTTTTRGH
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGCTATTTCAGG---
TTCTATTTTTAGNNN
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCTATTTCAGG-
-GCTATTTTTAGC
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

ETV2/MA0762.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCTATTTCAGG--
---TATTTCCGGTT
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T

MF0008.1_MADS_class/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCTATTTCAGG
--CCATATATGG
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTATTTCAGG
GTCTGTTTCTA-
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T

MEF2A/MA0052.4/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCTATTTCAGG--
NNTCTATTTTTAGNN
A C G T A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGCTATTTCAGG-
-GCTATTTATAGC
A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C