Information for 3-GTAANCTYTGAG (Motif 3)

C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G
Reverse Opposite:
A T G C G C A T A G T C C T G A C T G A C T G A A C T G A G T C C G A T A C G T G T C A A G T C
p-value:1e-5
log p-value:-1.276e+01
Information Content per bp:1.678
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2003.3
Percentage of Background Sequences with motif2.63%
Average Position of motif in Targets91.0 +/- 67.5bp
Average Position of motif in Background100.0 +/- 70.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAANCTYTGAG-
NNNGTGACCTTTGNNN
A C G T A C G T A C G T C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTAANCTYTGAG-
NNNNCAACCTTCGNGA
A C G T A C G T A C G T C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

Nr2f6/MA0677.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAANCTYTGAG---
-TGACCTTTGACCTN
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAANCTYTGAG---
-TGACCTTTGACCTC
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T A C G T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

PPARD/MA1550.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTAANCTYTGAG----
NTGACCTTTGACCCCN
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T A C G T A C G T
C A G T G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G A T C A G T C A G T C C G A T

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTAANCTYTGAG---
NTGACCTTTGACCTN
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXRG/MA0856.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAANCTYTGAG---
-TGACCTTTGACCCC
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

TCF7/MA0769.2/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTAANCTYTGAG--
---TCCTTTGATGT
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

THRB/MA1574.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTAANCTYTGAG---
NTGACCTTTGACCCC
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T A C G T
T C G A G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTAANCTYTGAG---
-TGACCTTTGACCCC
C T A G A C G T G T C A C G T A A C T G G T A C A G C T A G C T A G C T A C T G C G T A A T C G A C G T A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C