Information for 18-CATGGTTCACCT (Motif 19)

A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C G T A C T G
p-value:1e-4
log p-value:-9.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CATGGTTCACCT-
TGCCTGCGYCMCCTT
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATGGTTCACCT
CATTGTTCGG--
A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G A C G T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CATGGTTCACCT----
----GCACACCTGKNC
A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CATGGTTCACCT--
----RYHYACCTGB
A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

FOS/MA0476.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CATGGTTCACCT
NATGAGTCANN-
A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T
T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATGGTTCACCT
NCCATTGTTC----
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATGGTTCACCT
CCATTGTTC----
A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.3/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CATGGTTCACCT
-ATGAGTCATC-
A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T
A C G T T C G A G A C T C A T G G T C A T A C G C G A T G T A C C G T A A G C T T G A C A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CATGGTTCACCT---
-----TGCACCTGTT
A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T

SOX8/MA0868.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATGGTTCACCT
CCATTGTTCT---
A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A G T C A C G T
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T A C G T A C G T