Information for 2-AATGGAAGAT (Motif 3)

C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G C T A C G T A G T C A G T C C G T A A C G T A C G T
p-value:1e-7
log p-value:-1.745e+01
Information Content per bp:1.956
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif19.05%
Number of Background Sequences with motif69.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets78.2 +/- 31.9bp
Average Position of motif in Background100.4 +/- 65.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AATGGAAGAT
AATGGAAAAT
C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC4/MA1525.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATGGAAGAT
AATGGAAAAT
C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATGGAAGAT
AATGGAAAAT
C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATGGAAGAT
NATGGAAAAN
C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATGGAAGAT
NNTGGAAANN
C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AATGGAAGAT
--TGGAAAA-
C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

Isl1/MA1608.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AATGGAAGAT
NNCTAATGGNN---
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AATGGAAGAT
ACTATGAATGAATGAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

SOX2/MA0143.4/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATGGAAGAT
AAACAATGGAA---
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATGGAAGAT
GGYAATGAAA---
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A C T G A A C T G C G T A A C G T
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T