| p-value: | 1e-3 |
| log p-value: | -7.712e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.14% |
| Number of Background Sequences with motif | 3.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 185.0 +/- 0.0bp |
| Average Position of motif in Background | 88.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0106.1_Arid5a_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GTAAAATACG------ CATACAATACGAAATAA |
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HOXC12/MA0906.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTAAAATACG GGTCGTAAAAA--- |
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|
HOXC9/MA0485.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTAAAATACG GTCGTAAAAT--- |
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HOXD11/MA0908.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTAAAATACG GTCGTAAAAA--- |
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|
|
HOXB9/MA1503.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTAAAATACG GTCGTAAAAT--- |
|
|
|
HOXC13/MA0907.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTAAAATACG GCTCGTAAAAA--- |
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|
|
HOXD10/MA1506.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTAAAATACG GGTCGTAAAAC--- |
|
|
|
HOXC11/MA0651.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTAAAATACG GGTCGTAAAAT--- |
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|
|
PH0077.1_Hoxd12/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------GTAAAATACG CAAGGTCGTAAAATCTT |
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|
HOXD12/MA0873.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTAAAATACG AGTCGTAAAAA--- |
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