Information for 22-CGCCGGCGGG (Motif 40)

A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G
Reverse Opposite:
A G T C A T G C A G T C A C T G A G T C A G T C A T C G A C T G A G T C A C T G
p-value:1e-2
log p-value:-5.244e+00
Information Content per bp:1.941
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.0 +/- 65.4bp
Average Position of motif in Background95.0 +/- 39.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCCGGCGGG
GCGCCTGCGCA
A C G T A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

KLF15/MA1513.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGCCGGCGGG--
-GGGGGCGGGGC
A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T
A C G T T A C G T A C G A T C G A T C G C A T G A G T C A T C G A T C G A T C G T A C G T A G C

E2F6/MA0471.2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CGCCGGCGGG----
-GGGGGCGGGAAGG
A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGCCGGCGGG--
--CWGGCGGGAA
A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T
A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGCCGGCGGG---
-BTKGGCGGGAAA
A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T A C G T
A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CGCCGGCGGG--
----GGCGCGCT
A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGCCGGCGGG-----
NAGANTGGCGGGGNGNA
A C G T A C G T A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CGCCGGCGGG--
TGCCCNGGGGCA
A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

EGR1/MA0162.4/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGCCGGCGGG-
GNGCGTGGGCGTGN
A C G T A C G T A C G T A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T
T A C G A C T G T C A G A G T C T A C G A C G T T A C G A T C G T A C G G A T C T C A G A C G T T A C G A C T G

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGCCGGCGGG----
----GGCGGGAAAH
A G T C A C T G A G T C A T G C A C T G A C T G A G T C A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T