Information for 4-MSCRCAMRRGGS (Motif 4)

T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G
Reverse Opposite:
A T G C G T A C A G T C A G T C A G T C C A T G A C G T A C T G A G C T A C T G A T C G A C T G
p-value:1e-4
log p-value:-9.913e+00
Information Content per bp:1.763
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif91.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets107.0 +/- 35.4bp
Average Position of motif in Background105.5 +/- 71.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYC/MA0147.3/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:MSCRCAMRRGGS-
-NNGCACGTGGNN
T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G A C G T
A C G T T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---MSCRCAMRRGGS
NWAACCACADNN---
A C G T A C G T A C G T T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-MSCRCAMRRGGS
BMRVACAAWGGV-
A C G T T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:MSCRCAMRRGGS--
CTCACAGCAGGGGG
T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G A C G T A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--MSCRCAMRRGGS
AAACCGCAA-----
A C G T A C G T T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--MSCRCAMRRGGS
AAACCACAGAN---
A C G T A C G T T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:MSCRCAMRRGGS--
--CHCAGCRGGRGG
T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G A C G T A C G T
A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MSCRCAMRRGGS--
----HAWGRGGCCM
T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MSCRCAMRRGGS----
--CACAGCGGGGGGTC
T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:MSCRCAMRRGGS-
TGCCCNNAGGGCA
T G A C T A C G A G T C C T G A A G T C C G T A G T A C C T A G C T A G A C T G A C T G A T C G A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A