Information for 14-GAGTTCATGCTA (Motif 20)

A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.295e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background123.1 +/- 0.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAGTTCATGCTA
TGAGTTCA-----
A C G T A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAGTTCATGCTA
AAAGTTCAT----
A C G T A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGTTCATGCTA
CAAAGKTCAA----
A C G T A C G T A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGTTCATGCTA--
ACATTCATGACACG
A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGTTCATGCTA
-ACTTCCTGNT-
A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGTTCATGCTA
TRAGGTCA-----
A C G T A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAGTTCATGCTA
GAGGTCAT----
A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGTTCATGCTA
AGRGGTCA-----
A C G T A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGTTCATGCTA
-ACATCCTGNT-
A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGTTCATGCTA-----
-----TATGCWAATBAV
A C T G C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G