Information for 15-GCAAAGTCCC (Motif 34)

A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C T G A G T C
p-value:1e-2
log p-value:-6.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background149.6 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.2/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCAAAGTCCC--
TCCAAAGTCCAGA
A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCAAAGTCCC--
TCCAAAGTCCAAA
A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCAAAGTCCC
GGAAATTCCC
A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCAAAGTCCC
GGAAATTCCC
A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ZNF682/MA1599.1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GCAAAGTCCC---
CGGGCCAAGCCCCTAT
A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GCAAAGTCCC----
GGCAAAAGTCCAATAA
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GCAAAGTCCC
CANAGNNCAAAGTCCA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCAAAGTCCC
GGAAATCCCC
A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCAAAGTCCC
GGAAANCCCC
A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCAAAGTCCC-
GGGAAATCCCCN
A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C G T A G T C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T