| p-value: | 1e-10 |
| log p-value: | -2.423e+01 |
| Information Content per bp: | 1.723 |
| Number of Target Sequences with motif | 36.0 |
| Percentage of Target Sequences with motif | 3.42% |
| Number of Background Sequences with motif | 430.2 |
| Percentage of Background Sequences with motif | 0.90% |
| Average Position of motif in Targets | 99.8 +/- 54.0bp |
| Average Position of motif in Background | 98.3 +/- 57.7bp |
| Strand Bias (log2 ratio + to - strand density) | -1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.09 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0001.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGGTAGGTGA CAGGTAAGTAT |
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RORC/MA1151.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AGGTAGGTGA ATAAGTAGGTCA |
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RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AGGTAGGTGA- TATAAGTAGGTCAA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGGTAGGTGA AAYTAGGTCA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGGTAGGTGA AAYTAGGTCA |
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|
|
ZKSCAN5/MA1652.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGGTAGGTGA--- GGAGGAGGTGAGAA |
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|
RORB/MA1150.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGGTAGGTGA- AATTAGGTCAC |
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|
|
ASCL1(var.2)/MA1631.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AGGTAGGTGA-- NNGGCAGGTGCNN |
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|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGGTAGGTGA- WAABTAGGTCAV |
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TCF12(var.2)/MA1648.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGGTAGGTGA- NNGCAGGTGNN |
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