Information for 1-AGCTACACKGGG (Motif 1)

C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G
Reverse Opposite:
G T A C G T A C G A T C G T A C A C T G C G A T A C T G A C G T G T C A A C T G A G T C A C G T
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.713
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif295.4
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets97.3 +/- 54.4bp
Average Position of motif in Background103.7 +/- 73.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYC/MA0147.3/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGCTACACKGGG--
--NNGCACGTGGNN
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T A C G T
A C G T A C G T T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:AGCTACACKGGG-
-----CACGTGGN
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCTACACKGGG--------
TGTCATTACACGTGGAAGGCGGT
A C G T A C G T A C G T C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T A T G C C T A G G A C T C A G T T G C A G T A C C T G A A G T C T C A G G A C T A C T G A C T G G T C A C T G A C T A G A T C G G T A C C T A G C T A G G C A T

Npas2/MA0626.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGCTACACKGGG-
---NACACGTGCN
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T
A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

MYCN/MA0104.4/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGCTACACKGGG--
--GGCCACGTGGCC
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T A C G T
A C G T A C G T T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCTACACKGGG-
---GTCACGTGGM
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGCTACACKGGG--
----CCACGTGGNN
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGCTACACKGGG--
----CCACGTGGNN
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AGCTACACKGGG-
-----CACGTGBN
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGCTACACKGGG-
----ACACGTGGC
C G T A A C T G T A G C A C G T C G T A A G T C C G T A G T A C C A T G C A T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C