Information for 14-GTGCCAGCTAGC (Motif 25)

A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C T A G A G T C A C G T A C T G C T A G A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.585e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.0 +/- 56.6bp
Average Position of motif in Background88.5 +/- 51.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GTGCCAGCTAGC
-TGCCAGCB---
A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGCCAGCTAGC
-TGTCANYT---
A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTGCCAGCTAGC
ATGCCAACC---
A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTGCCAGCTAGC
VBTGWCAGCB---
A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGCCAGCTAGC
CGTGCCAAG----
A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTGCCAGCTAGC
AGGTGNCAGACAG-
A C G T A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTGCCAGCTAGC
-TGGCAGTTGG-
A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTGCCAGCTAGC
TTGCCAAG----
A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTGCCAGCTAGC-
GTATTGACAGCTNNTT
A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTGCCAGCTAGC-
ACTATGCCAACCTACC
A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C C G T A A C T G A G T C A C G T C G T A C T A G A G T C A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C