Information for 1-CTATGTGGGTAG (Motif 1)

A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G
Reverse Opposite:
A T G C A C G T C G T A A G T C G T A C A G T C C G T A A G T C C G T A A C G T C G T A C T A G
p-value:1e-19
log p-value:-4.592e+01
Information Content per bp:1.917
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.5 +/- 61.9bp
Average Position of motif in Background135.5 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTATGTGGGTAG
-TATGCGGGTA-
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T

GCM1/MA0646.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTATGTGGGTAG
-CATGCGGGTAC
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTGGGTAG--
NNNNATGCGGGTNNNN
A C G T A C G T A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTATGTGGGTAG
NNHTGTGGTTWN
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTATGTGGGTAG
GTCTGTGGTTT-
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTATGTGGGTAG
-NNTGTGGTTT-
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTATGTGGGTAG-
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

GLI2/MA0734.2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTATGTGGGTAG---
CGNCGTGGGTGGTCN
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTATGTGGGTAG
--CTGTGGTTTN
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

GLI3/MA1491.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTATGTGGGTAG---
CGNCGTGGGTGGTCN
A G T C C G A T C G T A A C G T A C T G A C G T A C T G A C T G A C T G A C G T C G T A A T C G A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T