| p-value: | 1e-4 |
| log p-value: | -1.039e+01 |
| Information Content per bp: | 1.819 |
| Number of Target Sequences with motif | 35.0 |
| Percentage of Target Sequences with motif | 13.46% |
| Number of Background Sequences with motif | 2940.5 |
| Percentage of Background Sequences with motif | 6.42% |
| Average Position of motif in Targets | 81.7 +/- 56.1bp |
| Average Position of motif in Background | 99.5 +/- 59.2bp |
| Strand Bias (log2 ratio + to - strand density) | 0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.21 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTAGGGT- DGWTTTATGRCN |
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|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTAGGGT- TTTTATGGCB |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TTTAGGGT- TTTTATGGCM |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTAGGGT- GTTTTATGGCC |
|
|
|
BARHL2/MA0635.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTTAGGGT ANCGTTTANN-- |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTAGGGT NTTTTATDRG |
|
|
|
BARHL1/MA0877.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTAGGGT NCGTTTAN--- |
|
|
|
NKX2-5/MA0063.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTAGGGT- NNTTGAGTGNN |
|
|
|
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTAGGGT- TTTCATKGCC |
|
|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTAGGGT NTTTTATGAC |
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|
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