Information for 22-GAACTCTGGCAC (Motif 24)

A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.899e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GAACTCTGGCAC--
--TGTCTGDCACCT
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAACTCTGGCAC
---VGCTGGCA-
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C
A C G T A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAACTCTGGCAC
ATGAACTTT-----
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GAACTCTGGCAC-
----NTTGGCANN
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZBTB12/MA1649.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GAACTCTGGCAC--
---ATCTGGAACCC
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAACTCTGGCAC
--GGTCTGGCAT
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAACTCTGGCAC--
-CTGTCTGTCACCT
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAACTCTGGCAC
----CTTGGCAA
A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGGCAC---
TGGACTTTGNNCTNTG
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

VDR/MA0693.2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAACTCTGGCAC
TGAACTCA-----
A C G T A C T G C G T A C G T A A G T C A C G T A G T C A C G T A C T G A C T G A G T C C G T A A G T C
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T