Information for 18-TGGTCAATGC (Motif 30)

A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C T G C G T A A G T C A G T C C G T A
p-value:1e-3
log p-value:-7.099e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background65.0 +/- 147.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TGGTCAATGC
-RRTCAATA-
A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C
A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

NFYB/MA0502.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCAATGC-
NTGGCCAATGAG
A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

NR1H4/MA1110.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCAATGC
NAGGTCATTGA
A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGGTCAATGC
CYWSTGGTCARA--
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCAATGC----
GGGGTCAATGACCTN
A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGGTCAATGC
AGGTCA----
A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCAATGC---
NAGGTCANTGACCT
A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCAATGC----
NAGGTCAATGACCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGGTCAATGC
CGAGGTCAC---
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGTCAATGC
--CACAATGC
A C G T A C T G A C T G A C G T A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C