Information for 3-CTGTCAGAACTA (Motif 6)

A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.112e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGAACTA
SCTGTCARCACC-
A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGTCAGAACTA
NTGTCAN-----
A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGAACTA
GCTGTCAA-----
A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAGAACTA
AATTACCTGTCAATAC--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAGAACTA
AACTAGCTGTCAATAC--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAGAACTA
AACGAGCTGTCAATAC--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCAGAACTA
CCTGTCAA-----
A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGTCAGAACTA
YTGWCADY----
A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CTGTCAGAACTA
AAAGACCTGTCAATAC--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CTGTCAGAACTA
NNNCAGCTGTCAATATN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A A G T C A C G T C G T A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T