Information for 2-TCTCTSAGKG (Motif 9)

A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G
Reverse Opposite:
A G T C G T A C A T G C C G A T T A C G C G T A A C T G C T G A C T A G G T C A
p-value:1e-4
log p-value:-1.136e+01
Information Content per bp:1.872
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif2598.4
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets105.2 +/- 53.5bp
Average Position of motif in Background103.1 +/- 87.6bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTSAGKG
VCCTCTCTGDDY-
A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTCTSAGKG---
-GCCTCAGGGCAT
A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T A C G T
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCTCTSAGKG--
ACCACTCTCGGTCAC
A C G T A C G T A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTSAGKG
WTGSCCTSAGGS
A C G T A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCTCTSAGKG---
--CTTGAGTGGCT
A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

TFAP2A/MA0003.4/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTCTSAGKG--
ATTGCCTCAGGCCA
A C G T A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCTCTSAGKG----
NNNTTGAGTGGNNN
A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCTCTSAGKG---
---TTGAGTGSTT
A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCTCTSAGKG----
CTCCCTGGGAGGCCN
A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCTCTSAGKG---
---TTRAGTGSYK
A C G T A G T C A G C T A G T C A C G T A T G C C G T A A T C G C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T