Information for 22-TGGTTAGCCC (Motif 41)

A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C A C G T C G T A C G T A A G T C A G T C C G T A
p-value:1e-3
log p-value:-6.958e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background114.3 +/- 82.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGTTAGCCC
ACTAGTTAAC--
A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTAGCCC---
NTTTTAGTTAACNNAGN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTAGCCC---
NNNTTAGTTAACTNANN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGGTTAGCCC
CTGTGGTTTN---
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTTAGCCC--
ANNNCTAGTTAACNGNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGGTTAGCCC--------
---TTAACCCTTTVNKKN
A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGGTTAGCCC
GCTGTGGTTT----
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGGTTAGCCC
NNTGTGGTTT----
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGGTTAGCCC
CGTGGGTGGTCC
A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGGTTAGCCC
TACCCTAGTTACCGA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A