Information for 4-AACATGATCTGT (Motif 6)

C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A A G C T A G T C C G T A A C G T A C T G A C G T A C G T
p-value:1e-12
log p-value:-2.814e+01
Information Content per bp:1.952
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets133.3 +/- 35.1bp
Average Position of motif in Background65.4 +/- 51.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AACATGATCTGT
GTAACCTGATA---
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AACATGATCTGT
GWAAYHTGABMC--
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T

SIX2/MA1119.1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AACATGATCTGT
AACTGAAACCTGATAC--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AACATGATCTGT--
-NNAACATCTGTNN
C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T A C G T A C G T
A C G T C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AACATGATCTGT
---ATGAACTTT
C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
A C G T A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

GRHL2/MA1105.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AACATGATCTGT
NAAACCTGTTTN--
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AACATGATCTGT
ANCAGGATGT--
C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AACATGATCTGT
NNTTTTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AACATGATCTGT
GWAAYHTGAKMC--
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T

DPRX/MA1480.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AACATGATCTGT
-AGATAATCCC-
C G T A C G T A A G T C C G T A A C G T C T A G C T G A A C G T A G T C C G A T A C T G A C G T
A C G T T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C A C G T