Information for 5-CCTGCKYTACAT (Motif 5)

A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
Reverse Opposite:
C G T A C A G T T A C G A C G T C G T A C T G A G T A C C A T G A G T C C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.017e+01
Information Content per bp:1.672
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif1873.1
Percentage of Background Sequences with motif2.12%
Average Position of motif in Targets62.6 +/- 45.8bp
Average Position of motif in Background100.6 +/- 81.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCTGCKYTACAT-
TGCCTGCGYCMCCTT
A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCKYTACAT--
GYCTGGYYTNTGTCA
A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCTGCKYTACAT
TRCACCTGCY------
A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCTGCKYTACAT
CGCACCTGCCG-----
A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CCTGCKYTACAT
NAAACCTGTTTN----
A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGCKYTACAT
RYHYACCTGB-------
A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCTGCKYTACAT
CCCACCTGCGC-----
A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.3/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCTGCKYTACAT
CGCACCTGCCC-----
A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C A C G T A C G T A C G T A C G T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCTGCKYTACAT
NGCACCTGCN------
A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTGCKYTACAT
NNCACCTGNN------
A C G T A C G T A C G T A C G T A G T C G T A C C G A T C T A G G A T C A C T G A G C T G A C T G T C A A G T C G C T A A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T