Information for 10-CAGCCACATGSA (Motif 11)

T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
Reverse Opposite:
C G A T T A C G A T G C G T C A C G A T A C T G A C G T C T A G C T A G A T G C A C G T A C T G
p-value:1e-3
log p-value:-9.168e+00
Information Content per bp:1.601
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif2728.1
Percentage of Background Sequences with motif5.23%
Average Position of motif in Targets86.7 +/- 35.7bp
Average Position of motif in Background98.7 +/- 74.0bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CAGCCACATGSA
--GACACATGGC
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

MSGN1/MA1524.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAGCCACATGSA-
-CGCCATATGTCC
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A A C G T
A C G T A T G C T C A G A T G C A T G C C T G A G C A T C G T A A G C T A T C G A C G T A G T C T A G C

NEUROD2/MA0668.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCCACATGSA
--GCCATATGGT
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAGCCACATGSA-
GGAACAGATGGCA
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGCCACATGSA
-NNCCACGTGG-
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T

USF2/MA0526.3/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGCCACATGSA--
NNGTCACATGACNN
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGCCACATGSA
--GTCACGTGGM
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

HAND2/MA1638.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCCACATGSA
--ACCAGATGGC
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAGCCACATGSA
--DMCAGATGKS
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
A C G T A C G T C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCCACATGSA
--ACCATATGTT
T A G C T C G A T A C G G A T C A G T C T C G A T G A C G C T A A C G T A T C G A T G C G C T A
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T