Information for 10-GCAGCCTAAG (Motif 29)

A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.250e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif19.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background133.2 +/- 68.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCAGCCTAAG
BCAGACWA--
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCAGCCTAAG---
--AGCCTCAGGCA
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAGCCTAAG
-CAGCC----
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGCCTAAG----
ATTGCCTCAGGCCA
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAGCCTAAG----
NNCGCCTCAGGCNN
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAGCCTAAG-----
GGCACCCAGGGGTGC
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCAGCCTAAG-----
---GCCTCAGGGCAT
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCAGCCTAAG-----
---SCCTSAGGSCAW
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

ZNF449/MA1656.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCTAAG---
CCAAGCCCAACCAG
A C G T A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

TFAP2E/MA1569.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCAGCCTAAG---
--NGCCTGAGGCN
A C T G A G T C C G T A A C T G A G T C A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G