Information for 9-AGAGGCAGGTGC (Motif 9)

C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A G T C A C G T A C T G A G T C A G T C A G C T A G T C A C G T
p-value:1e-11
log p-value:-2.731e+01
Information Content per bp:1.969
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets107.3 +/- 56.3bp
Average Position of motif in Background109.8 +/- 53.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:1
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:AGAGGCAGGTGC--
-NNGGCAGGTGCNN
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF4/MA0830.2/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:AGAGGCAGGTGC--
-NNGGCAGGTGCNN
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:AGAGGCAGGTGC--
--SDGCAGGTGCNS
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI1/MA1558.1/Jaspar

Match Rank:4
Score:0.78
Offset:3
Orientation:forward strand
Alignment:AGAGGCAGGTGC-
---GGCAGGTGCA
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:AGAGGCAGGTGC-
--NNGCAGGTGNN
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:AGAGGCAGGTGC-
--NNGCAGGTGNN
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:7
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:AGAGGCAGGTGC-
---RGCAGGTGYA
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

ZEB1/MA0103.3/Jaspar

Match Rank:8
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:AGAGGCAGGTGC-
--NNGCAGGTGNN
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AGAGGCAGGTGC-
-SSRGCAGCTGCH
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:AGAGGCAGGTGC-
---NNCAGGTGNN
C G T A A C T G C T G A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G