Information for 15-RTGGRGRGTRCT (Motif 27)

C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A G T C A G T C C G T A A G T C
p-value:1e-5
log p-value:-1.336e+01
Information Content per bp:1.875
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.6 +/- 51.5bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-RTGGRGRGTRCT----
GCTGGGGGGTACCCCTT
A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PB0025.1_Glis2_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--RTGGRGRGTRCT--
NTNTGGGGGGTCNNNA
A C G T A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

VEZF1/MA1578.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--RTGGRGRGTRCT
NNGTGGGGGG----
A C G T A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T
C G T A G C T A T C A G C A G T C A T G C A T G A C T G A C T G A C T G A T C G A C G T A C G T A C G T A C G T

GLIS3/MA0737.1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----RTGGRGRGTRCT
CTTCGTGGGGGGTC--
A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T A C G T

ZNF740/MA0753.2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RTGGRGRGTRCT-
GTGGGGGGGGCGG
C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T A C G T
C T A G C A G T A C T G T A C G A C T G C A T G C A T G C A T G A C T G C A T G A G T C C T A G C A T G

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----RTGGRGRGTRCT
CTTCGCGGGGGGTC--
A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RTGGRGRGTRCT------
-TTCNAAGTACTTNNNNN
C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----RTGGRGRGTRCT
GCTTCGTGGGGGGTCT-
A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T A C G T

MZF1/MA0056.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--RTGGRGRGTRCT
NNNTGGGGATTNN-
A C G T A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RTGGRGRGTRCT
CGTGGGTGGTCC-
A C G T C T A G A C G T A C T G A C T G C T A G A C T G C T A G A C T G A C G T C T A G A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T