Information for 8-GGATGGATGG (Motif 17)

C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G
Reverse Opposite:
G T A C G T A C G C T A G A C T A G T C G T A C G C T A G C A T T A G C G T A C
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.656
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif1824.9
Percentage of Background Sequences with motif3.83%
Average Position of motif in Targets91.0 +/- 52.6bp
Average Position of motif in Background99.4 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:GGATGGATGG
TGATKGATGR
C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGATGGATGG-
ATGATKGATGRC
A C G T C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGATGG-
NNTGATTGATGNN
A C G T A C G T C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGATGGATGG--
TGATTRATGGCY
C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G A C G T A C G T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGATGG
TTTGATTGATGN
A C G T A C G T C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGATGGATGG
TGATTGATGA
C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GGATGGATGG
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GGATGGATGG
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGATGGATGG------
GTATTGGGTGGGTAATT
A C G T C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

KLF17/MA1514.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGATGGATGG--
AAGGGGTGCGTGGTG
A C G T A C G T A C G T C A T G A T C G C G T A C G A T C A T G T C A G C T G A C G A T C A T G C A T G A C G T A C G T
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G