| p-value: | 1e-9 |
| log p-value: | -2.222e+01 |
| Information Content per bp: | 1.951 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 0.68% |
| Number of Background Sequences with motif | 2.8 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 85.2 +/- 50.4bp |
| Average Position of motif in Background | 9.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 2.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCACCTACCTAC- TTGACCTANTTATN |
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SD0001.1_at_AC_acceptor/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTACCTAC NNACTTACCTN- |
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ZKSCAN5/MA1652.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCACCTACCTAC NNCTCACCTCCTNN- |
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RORC/MA1151.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTACCTAC TGACCTANTTAN |
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|
|
ZKSCAN1/MA1585.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | TCACCTACCTAC--- -----CACCTACTAT |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTACCTAC TGACCTARTT-- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTACCTAC TGACCTARTT-- |
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|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCACCTACCTAC BTGACCTAVTTW- |
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|
|
TCF12(var.2)/MA1648.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCACCTACCTAC CGCACCTGCCG-- |
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|
TCF3/MA0522.3/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCACCTACCTAC CGCACCTGCCC-- |
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