Information for 13-GGTGTATCCC (Motif 33)

A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C G T C G T A A G T C C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.852e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.0 +/- 0.0bp
Average Position of motif in Background113.5 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFKB2/MA0778.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTATCCC--
AGGGGAATCCCCT
A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTGTATCCC
GGGGGTGTGTCC-
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGTGTATCCC--
AGGGGATTCCCCT
A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGTGTATCCC-
AATGTATCAAT
A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTGTATCCC-
GGGGGAATCCCC
A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGTGTATCCC-
TGGTACATTCCA
A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGTGTATCCC----
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGTGTATCCC-----
NNNNGGTACCCCCCANN
A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTGTATCCC----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTGTATCCC----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T