Information for 9-GTCTGTCGTA (Motif 19)

A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.496e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background86.8 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GTCTGTCGTA---
GNNATTTGTCGTAANN
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCTGTCGTA
VBSYGTCTGG----
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

HOXC9/MA0485.2/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTCTGTCGTA----
----GTCGTAAAAT
A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTCGTA
CTGTCTGG----
A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCTGTCGTA
GGTCTGGCAT-
A C G T A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

HOXA9/MA0594.2/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTCTGTCGTA----
----GTCGTAAACG
A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

HOXB9/MA1503.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTCTGTCGTA----
----GTCGTAAAAT
A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A G T C T C A G A C G T G C T A C G T A G T C A G C T A G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCTGTCGTA
TWGTCTGV----
A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTGTCGTA--
NNHTGTGGTTWN
A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCTGTCGTA
---TGACGT-
A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G A C G T C G T A
A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T