Information for 23-CCACTACACCTA (Motif 41)

A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T T A C G A C G T C G T A C T A G C G A T A C T G A T C G
p-value:1e-4
log p-value:-9.228e+00
Information Content per bp:1.889
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.7 +/- 46.7bp
Average Position of motif in Background73.7 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)3.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX20/MA0689.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCACTACACCTA
-CTTCACACCTA
A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCACTACACCTA
NSCACTYVAV---
A C G T A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACTACACCTA
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C G T A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCACTACACCTA---
NNGGCGACACCTCNNN
A C G T A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCACTACACCTA
---TCACACCT-
A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACTACACCTA
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C G T A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCACTACACCTA
---TCACACCT-
A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T

TBX6/MA1567.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCACTACACCTA
--TTCACACCTN
A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A
A C G T A C G T G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCACTACACCTA--
----TRCACCTGCY
A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T

SNAI3/MA1559.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCACTACACCTA--
----TGCACCTGTT
A T G C A G T C C G T A A G T C A C G T C G T A A G T C C G T A A G T C G T A C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T