| p-value: | 1e-3 |
| log p-value: | -7.689e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.14% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 70.0 +/- 0.0bp |
| Average Position of motif in Background | 94.1 +/- 49.3bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | CATAAAAGATAT--- ----AAGGATATNTN |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CATAAAAGATAT GTCATAAAAN---- |
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|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CATAAAAGATAT KGCCATAAAA----- |
|
|
|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CATAAAAGATAT NGYCATAAAWCH--- |
|
|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CATAAAAGATAT VGCCATAAAA----- |
|
|
|
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CATAAAAGATAT NCYAATAAAA----- |
|
|
|
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CATAAAAGATAT CCYMATAAAA----- |
|
|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CATAAAAGATAT AATGCAATAAAATTTAT |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CATAAAAGATAT GGCCATAAAAC---- |
|
|
|
PH0056.1_Hoxa9/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CATAAAAGATAT ACGGCCATAAAATTAAT |
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