Information for 22-CTCACCTTGTTC (Motif 26)

A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.574e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets184.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTCACCTTGTTC
NNACTTACCTN----
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCACCTTGTTC
-TGACCTTGAT-
A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:CTCACCTTGTTC--
----CATTGTTCGG
A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

ESRRA/MA0592.3/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCACCTTGTTC
NNTGACCTTGANN
A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCACCTTGTTC
NTGACCTTGA--
A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTCACCTTGTTC-
---YCTTTGTTCC
A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTCACCTTGTTC----
GAGCCCTTGTCCCTAA
A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCACCTTGTTC
BNTGDCCTTG---
A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCACCTTGTTC--
GCTGACCTTGAACTN
A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

SOX4/MA0867.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCACCTTGTTC
--NCCTTTGTTC
A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C G T A G T C
A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C