Information for 2-TCACGACTGG (Motif 10)

A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A
p-value:1e-3
log p-value:-8.500e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TCACGACTGG
NHRTCACGACDN-
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C A C G T

HOXA9/MA0594.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCACGACTGG
NNTTTACGAC---
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C A C G T A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCACGACTGG
NTTTTACGACT--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCACGACTGG----
TTTTACGACTTTCCAT
A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCACGACTGG
NTTTTACGACC--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCACGACTGG-----
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCACGACTGG
NTTTTACGACC--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCACGACTGG
NTTTTACGAC---
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T A C G T A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TCACGACTGG-
ANNATTTTACGACNTNA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC9/MA0485.2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCACGACTGG
NTTTTACGAC---
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A C T G A C T G
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T A C G T A C G T