Information for 20-CAGCCTGAGGGT (Motif 22)

A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.376e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background133.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CAGCCTGAGGGT--
NNGCCTGAGGCANN
A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CAGCCTGAGGGT--
GGGCCTGAGGCGGG
A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGAGGGT
-TGCCTGAGGCN
A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CAGCCTGAGGGT--
--GCCTCAGGGCAT
A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CAGCCTGAGGGT--
--SCCTSAGGSCAW
A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTGAGGGT--
ATTGCCTGAGGCAAT
A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2E/MA1569.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGAGGGT
-NGCCTGAGGCN
A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T
A C G T G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CAGCCTGAGGGT-
-TGCCCNGGGGCA
A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTGAGGGT--
ATTGCCTGAGGCGAA
A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGCCTGAGGGT--
ATTCCCTGAGGGGAA
A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A