Information for 11-GATTTATGCG (Motif 22)

A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C G T C G T A C G T A C G T A A C G T A G T C
p-value:1e-3
log p-value:-7.775e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background82.7 +/- 72.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----GATTTATGCG-
AAATGATTTATGGCT
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GATTTATGCG
NNTGATTTATGNN
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GATTTATGCG
NNTGATTGATGNN
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATGCG-
TGATTTATGGCC
A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GATTTATGCG
RTGATTKATRGN
A C G T A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATGCG
TGATTGATGA-
A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATTTATGCG-
-TTTTATKRGG
A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GATTTATGCG-
DGWTTTATGRCN
A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PB0184.1_Tbp_2/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GATTTATGCG---
CCGATTTAAGCGACC
A C G T A C G T A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G A C G T A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

HOXA13/MA0650.2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GATTTATGCG-
GTTTTATTGGN
A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G A C G T
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G