Information for 21-TGGGGTTTAATA (Motif 33)

A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A C G T A C G T A A G T C A G T C T G A C A G T C C G T A
p-value:1e-4
log p-value:-9.247e+00
Information Content per bp:1.945
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.7 +/- 56.4bp
Average Position of motif in Background143.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0129.1_Otx1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGGGGTTTAATA---
AGAGGGGATTAATTTAT
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGGGTTTAATA
NNTGTGGTTT----
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGTTTAATA
TTGCGGTTT----
A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGGGGTTTAATA
-----TTTAAT-
A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGGGGTTTAATA---
TGTAGGGATTAATTGTC
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGGGTTTAATA
CTGTGGTTTN---
A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGGGGTTTAATA
NNTTGAGGTTNN---
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGGGGTTTAATA
GTCTGTGGTTT----
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGGGGTTTAATA
GCTGTGGTTT----
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGGGTTTAATA---
TGAAGGGATTAATCATC
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T C G A T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C