Information for 11-GCAGGCCTGGAT (Motif 12)

A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.006e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets166.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GCAGGCCTGGAT
--AGGCCTNG--
A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GCAGGCCTGGAT
--AGGCCTAG--
A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCAGGCCTGGAT---
-CAGGCCNNGGCCNN
A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAGGCCTGGAT--
GTCATGCHTGRCTGS
A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Prdm15/MA1616.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCAGGCCTGGAT-
AGGAAAACCTGGAGC
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCAGGCCTGGAT---
GCTGACCTTGAACTN
A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GCAGGCCTGGAT-
---GGTCTGGCAT
A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCAGGCCTGGAT----
--TTGCCCGGATTAGG
A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCAGGCCTGGAT
CACAGCAGGGG-----
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCCTGGAT--
NGTCACGCTTGGCTGC
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C