Information for 18-GGCTTAGTAT (Motif 36)

A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C G T C G T A C G T A A C T G A G T C A G T C
p-value:1e-2
log p-value:-6.784e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background93.2 +/- 100.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCTTAGTAT
GGATTAGC--
A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTAGTAT
NGGATTAN---
A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTAGTAT
GGGATTANN--
A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTAGTAT
NGGGATTA----
A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGCTTAGTAT
AAGAGGATTAG---
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGCTTAGTAT
AAGGGATTAGAA-
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTAGTAT
NGGATTAN---
A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGCTTAGTAT-
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGCTTAGTAT-
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTAGTAT
CGGATTAN---
A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C G T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T