| p-value: | 1e-4 |
| log p-value: | -9.644e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 169.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nr2f6(var.2)/MA0728.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGTCCTATTCAC--- TGACCTTTTGACCTC |
|
|
|
NR1D1/MA1531.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTCCTATTCAC-- NTGACCTACTGACCC |
|
|
|
Rarg/MA0859.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTCCTATTCAC--- TTGACCTTTTGACCTT |
|
|
|
NR1D2/MA1532.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTCCTATTCAC-- NTGACCCACTAACCC |
|
|
|
Rarb/MA0857.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGTCCTATTCAC---- TGACCTTTTGACCTTT |
|
|
|
RARA/MA0729.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TGTCCTATTCAC--- CATTGACCTTTTGACCTC |
|
|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTCCTATTCAC BTGACCTAVTTW- |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGTCCTATTCAC TGACCTANTTAN |
|
|
|
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGTCCTATTCAC---- TGACCCAGTGACCTAC |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGTCCTATTCAC TGACCTYA---- |
|
|
|