Information for 14-CACAAAGTAGAT (Motif 18)

A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.802e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACAAAGTAGAT--
GCACAYAGTAGGKCY
A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

Dmrt1/MA1603.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CACAAAGTAGAT
GATACAAAGTATC-
A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C A C G T

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CACAAAGTAGAT
AAAACAAAGAA---
A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAGTAGAT
AAACAGACAAAGGAAT-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAGTAGAT
VRRACAAWGG----
A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CACAAAGTAGAT
GAACAAAGGG---
A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CACAAAGTAGAT-
---ATAGTAGGTG
A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACAAAGTAGAT
BMRVACAAWGGV---
A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACAAAGTAGAT-
TCCAAAGTCCAAA
A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACAAAGTAGAT-
TCCAAAGTCCAGA
A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G C G T A A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A