Information for 4-GACCWACTGA (Motif 4)

A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A G C T C G T A A C T G A C T G A C G T A G T C
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.904
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif6.00%
Number of Background Sequences with motif78.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets120.5 +/- 64.1bp
Average Position of motif in Background80.0 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1D1/MA1531.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GACCWACTGA---
NTGACCTACTGACCC
A C G T A C G T A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

NR1D2/MA1532.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GACCWACTGA---
NTGACCCACTAACCC
A C G T A C G T A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T A C G T A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GACCWACTGA--
--CCTGCTGAGH
A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GACCWACTGA-
NNCCTGCTGNG
A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GACCWACTGA-----
TGACCCAGTGACCTAC
A C G T A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GACCWACTGA
CACCTACTAT
A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACCWACTGA----
CGACCAACTGCCGTG
A C G T A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

TFAP4/MA0691.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GACCWACTGA-
-AACAGCTGAT
A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T
A C G T T G C A G C T A A G T C G T C A A T C G T A G C G A C T A T C G C G T A A G C T

MYB/MA0100.3/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GACCWACTGA-
-ACCAACTGTC
A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A A C G T
A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GACCWACTGA
-ANCAGCTG-
A C T G C G T A A G T C A G T C C G A T C T G A A G T C A C G T C T A G C G T A
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T