Information for 2-ATATTCTC (Motif 9)

C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A A C G T C G T A A C G T
p-value:1e-4
log p-value:-1.042e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif23.53%
Number of Background Sequences with motif530.3
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets116.5 +/- 40.5bp
Average Position of motif in Background100.4 +/- 64.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ATATTCTC------
AGTATTCTCGGTTGC
A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATATTCTC------
NNAATTCTCGNTNAN
A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATATTCTC
AAGATATCCTT
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ATATTCTC
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------ATATTCTC
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATATTCTC
CTCATTGTC
A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATATTCTC
ATGAATATTC--
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATATTCTC--
TNTTATCTTATCTT
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

RELB/MA1117.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATATTCTC---
GAATTCCCCGG
C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ATATTCTC
ATGMATATDC--
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T