Information for 21-CATTGTCATCAT (Motif 22)

A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.119e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CATTGTCATCAT
CTCATTGTC-----
A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

CREB1/MA0018.4/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CATTGTCATCAT--
-NATGACATCANNN
A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T
A C G T C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATTGTCATCAT
NNCCATTGTNN----
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATTGTCATCAT
NNCCATTGTNN----
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCATCAT
CCATTGTTTT---
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CATTGTCATCAT
--YTGWCADY--
A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CATTGTCATCAT---
--ATGACATCATCNN
A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCATCAT-
TAATTGTTCTAAAC
A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CATTGTCATCAT
--NTGTCAN---
A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

ATF2/MA1632.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATTGTCATCAT--
-NATGACNTCATNN
A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T
A C G T C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T