Information for 19-GTGAGTAGACAT (Motif 29)

A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T
Reverse Opposite:
G T C A A C G T A C T G A C G T A G T C A C G T C G T A A G T C A C G T A G T C C G T A A G T C
p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.954
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.5 +/- 48.2bp
Average Position of motif in Background60.4 +/- 41.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GTGAGTAGACAT
GTGAGTGNAC--
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T

FOXA1/MA0148.4/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTGAGTAGACAT--
--ATGTAAACATGT
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

ZSCAN29/MA1602.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTGAGTAGACAT
NCNGTGTAGACG-
A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGAGTAGACAT
-AAAGTAAACA-
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTGAGTAGACAT-
-TATGTAAACANG
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T A C G T
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGAGTAGACAT
-AAAGTAAACA-
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA2/MA0047.3/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTGAGTAGACAT-
--ATGTAAACATA
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T A C G T
A C G T A C G T C T G A C G A T C T A G G C A T G T C A G T C A G C T A A G T C G C T A G C A T C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTGAGTAGACAT-
NNNVCTGWGYAAACASN
A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

FOXA3/MA1683.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGAGTAGACAT-
--ATGTAAACATA
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T A C G T
A C G T A C G T C T G A C G A T C T A G G A C T G T C A G T C A G C T A A G T C G C T A C G A T C G T A

FOXP1/MA0481.3/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGAGTAGACAT-
--ATGTAAACATA
A C T G A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A T G A C G T C A A C G T A C G T
A C G T A C G T C G T A C G A T C T A G C G A T G T C A G T C A G C T A A G T C G C T A G C A T G C T A