Information for 8-GTCAGAGTGC (Motif 18)

A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C
Reverse Opposite:
T A C G A G T C C G T A A G T C G A C T A G T C A C G T C T A G C T G A A G T C
p-value:1e-6
log p-value:-1.524e+01
Information Content per bp:1.840
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif217.2
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets91.3 +/- 63.4bp
Average Position of motif in Background100.2 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-2.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGAGTGC----
GGTCANNGTGACCTN
A C G T A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T A C G T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCAGAGTGC---
AGGTCACCCTGACCT
A C G T A C G T A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

HNF4G/MA0484.2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCAGAGTGC---
TCCAAAGTCCAGA
A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCAGAGTGC-
AGGGGTCAGAGGTCA
A C G T A C G T A C G T A C G T A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTCAGAGTGC--
--TTRAGTGSYK
A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCAGAGTGC---
TCCAAAGTCCAAA
A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTCAGAGTGC-
CANAGNNCAAAGTCCA
A C G T A C G T A C G T A C G T A C G T A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCAGAGTGC-
GAGGTCAAAGGTCA
A C G T A C G T A C G T A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

THRB/MA1574.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCAGAGTGC--
GGGGTCAAAGGTCAT
A C G T A C G T A C G T A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A A G C T

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCAGAGTGC-
VNAGGKCAAAGGTCA
A C G T A C G T A C G T A C G T A C T G G A C T A G T C C G T A T C A G C T G A C T A G A C G T A C T G A T G C A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A