Information for 17-GTCTAAGGGAAG (Motif 21)

A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.552e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background194.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTCTAAGGGAAG
--CTAATKGV--
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTCTAAGGGAAG
---TNNGGGCAG
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G
A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTCTAAGGGAAG---
----AAGGCAAGTGT
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCTAAGGGAAG
NNCTAATGGNN-
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCTAAGGGAAG----
SMCAGTCWGAKGGAGGAGGC
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:GTCTAAGGGAAG-
-------NGAAGC
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

ZNF528/MA1597.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCTAAGGGAAG-------
--CCCAGGGAAGCCATTTC
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTCTAAGGGAAG
----ACCGGAAG
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCTAAGGGAAG
GCCTCAGGGCAT
A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTCTAAGGGAAG
GAGGTCAAAGGTCAC
A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C T G A C T G A C T G C G T A C G T A A C T G
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C