Information for 2-ACSYGAGTWKAS (Motif 2)

C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T G T A C C G T A C T G A A G T C A C G T A G T C T C A G A T C G A C T G A C G T
p-value:1e-6
log p-value:-1.444e+01
Information Content per bp:1.833
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif44.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets93.5 +/- 24.5bp
Average Position of motif in Background73.7 +/- 102.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ACSYGAGTWKAS
--GTGAGTGNAC
C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACSYGAGTWKAS
---TGAGTTCA-
C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
A C G T A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACSYGAGTWKAS-
-NCNGTGTAGACG
C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G A C G T
A C G T A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

SIX1/MA1118.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACSYGAGTWKAS
GTAACCTGATA----
A C G T A C G T A C G T C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACSYGAGTWKAS
NCACGTGACN----
A C G T A C G T C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----ACSYGAGTWKAS
GGGTACGTGC------
A C G T A C G T A C G T A C G T C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACSYGAGTWKAS
GTCACGTGAN-----
A C G T A C G T A C G T C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:8
Score:0.52
Offset:-9
Orientation:forward strand
Alignment:---------ACSYGAGTWKAS-
GGAAGAGTCACGTGACCAATAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G A C G T
C T A G C T A G G C T A C G T A A C T G C T G A C T A G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A A T G C A G T C G T C A T C G A G A C T C G T A G A T C

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACSYGAGTWKAS
CACGTG-------
A C G T C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ACSYGAGTWKAS
TACGTGCV-----
A C G T C G T A A G T C A T G C A G C T A C T G C G T A A C T G A G C T C G A T A C T G C G T A A T C G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T A C G T