Information for 11-ATGGGAACGA (Motif 23)

C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A C G T A G T C A G T C A G T C C G T A A C G T
p-value:1e-3
log p-value:-7.598e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background148.3 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ATGGGAACGA
CCTGGGAAAG-
A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAACGA
CSTGGGAAAD-
A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

RFX7/MA1554.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATGGGAACGA
NTAGCAACG-
C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATGGGAACGA---
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

RFX3/MA0798.2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGGGAACGA
TNCCATAGCAACNN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

RFX2/MA0600.2/Jaspar

Match Rank:6
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ATGGGAACGA
CGTTGCCATGGCAACG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A T G C C T A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A A G T C T A C G A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGGGAACGA
NATGGAAAAN-
A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGGAACGA
TTGCCATGGCAACN-
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T

RFX1/MA0509.2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGGGAACGA
TNCCATAGCAACNN
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

RFX5/MA0510.2/Jaspar

Match Rank:10
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------ATGGGAACGA
NGTTGCCATGGCAACG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A C G T A A G T C A C T G C G T A
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G A C G T