Information for 2-TGCGATTGAG (Motif 6)

A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A G T C A A C G T G A T C T A C G A G T C C G T A
p-value:1e-13
log p-value:-3.081e+01
Information Content per bp:1.886
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets70.4 +/- 35.7bp
Average Position of motif in Background98.4 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGCGATTGAG
WATGCAAATGAG
A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGCGATTGAG
AATATGCAAATTAG
A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGCGATTGAG----
NNANTGATTGATNNNN
A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGCGATTGAG-
---TATTGAYY
A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G A C G T
A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGCGATTGAG-
TTGTATGCAAATTAGA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TGCGATTGAG-
TTGTATGCAAATTAGA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

Hmx1/MA0896.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCGATTGAG----
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TGCGATTGAG----
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGCGATTGAG
ATATGCAAATNNN
A C G T A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCGATTGAG----
NNANTGATTGATNTTN
A C G T A C G T A C G T A C T G A T G C C T A G C G T A A C G T A C G T C T A G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C