| p-value: | 1e-3 |
| log p-value: | -8.550e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 45.0 +/- 0.0bp |
| Average Position of motif in Background | 45.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.82 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGATGATGGATG-- --ATGATKGATGRC |
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HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 2 |
| Score: | 0.79 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AGATGATGGATG- ---TGATKGATGR |
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MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.72 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AGATGATGGATG-- -NNTGATTGATGNN |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | AGATGATGGATG- ---TGATTGATGA |
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PBX1/MA0070.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AGATGATGGATG- -TTTGATTGATGN |
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|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AGATGATGGATG--- ---TGATTRATGGCY |
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PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AGATGATGGATG-- --RTGATTKATRGN |
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PB0144.1_Lef1_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AGATGATGGATG--- NNANTGATTGATNTTN |
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PH0134.1_Pbx1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AGATGATGGATG- NNNNNATTGATGNGTGN |
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MEIS2(var.2)/MA1640.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AGATGATGGATG--- AAATGATTTATGGCT |
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