Information for 3-AGASMSCC (Motif 21)

C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C
Reverse Opposite:
C T A G A C T G A T C G A C G T A T G C A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.963e+00
Information Content per bp:1.774
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif861.0
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets81.7 +/- 37.3bp
Average Position of motif in Background97.2 +/- 80.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGASMSCC
CCAGACRSVB
A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AGASMSCC
GGTTAGAGACCT
A C G T A C G T A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGASMSCC
CCAGACAG--
A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGASMSCC-----
TATCGACCCCCCACAG
A C G T A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGASMSCC
TCTAGACA---
A C G T A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGASMSCC------
AGGAGACCCCCAATTTG
A C G T A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGASMSCC-----
CATAAGACCACCATTAC
A C G T A C G T A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AGASMSCC--
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGASMSCC---
-AAGACCCYYN
C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C A C G T A C G T A C G T
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

GLIS1/MA0735.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGASMSCC--------
AGACCCCCCACGAAGC
C G T A C T A G C G T A T A C G G T C A A T G C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C