Information for 9-GTTTTCAAGCCT (Motif 12)

A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C
p-value:1e-4
log p-value:-9.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background140.1 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTCAAGCCT----
NNTTTTCACACCTTNNN
A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTTTTCAAGCCT
--TTTGAAACCG
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTTTTCAAGCCT-
NTTTTCACACCTT
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTTTTCAAGCCT
--TTTCACACCT
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTTTTCAAGCCT
--TTTCACACCT
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GTTTTCAAGCCT
-----CAAGCTT
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTTTTCAAGCCT
-TTTTCCA----
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTTTTCAAGCCT
VDTTTCCCGCCA
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A

TBX18/MA1565.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTTTTCAAGCCT--
--NTTCACACCTCC
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GTTTTCAAGCCT-
---TTCACACCTT
A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T