Information for 1-GTAGTAGCCAAG (Motif 2)

C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G
Reverse Opposite:
G A T C C G A T A C G T A C T G A C T G T A G C A G C T G T C A G T A C A G C T G T C A G A T C
p-value:1e-7
log p-value:-1.618e+01
Information Content per bp:1.690
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif35.29%
Number of Background Sequences with motif725.8
Percentage of Background Sequences with motif1.44%
Average Position of motif in Targets86.7 +/- 42.8bp
Average Position of motif in Background102.1 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXN3/MA1489.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GTAGTAGCCAAG
---GTAAACAA-
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G
A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTAGTAGCCAAG--
--ACTAGCCAATCA
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G A C G T A C G T
A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTAGTAGCCAAG
---BCAGACWA-
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTAGCCAAG-------
NNTNGNNGTAACCAAGNNNNAGN
A C G T A C G T A C G T A C G T C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTAGTAGCCAAG
---GTAAACAA-
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G
A C G T A C G T A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTAGTAGCCAAG
---CGTGCCAAG
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTAGTAGCCAAG
---GTAAACAA-
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G
A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T

FOXK1/MA0852.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTAGTAGCCAAG--
AATGTAAACAAGGC
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G A C G T A C G T
C G T A C T G A C A G T T C A G C G A T T G C A T G C A G T C A A G T C G T C A T C G A T A C G T A C G T G A C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAGTAGCCAAG-
-NDGTAAACARRN
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G A C G T
A C G T G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTAGTAGCCAAG
-AAGTAAACAAA
C A T G C A G T C T G A C A T G A C G T C T G A A C T G T G A C A G T C G T C A C G T A C A T G
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A