Information for 10-HACWCKRGTC (Motif 22)

G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
Reverse Opposite:
T C A G G T C A A G T C A G C T T G A C C T A G C G A T A C T G G A C T C T G A
p-value:1e-6
log p-value:-1.463e+01
Information Content per bp:1.589
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif34.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets94.5 +/- 48.9bp
Average Position of motif in Background97.1 +/- 67.8bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CLOCK/MA0819.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:HACWCKRGTC
AACACGTGTT
G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-HACWCKRGTC------
GAAAACTAGTTAACATC
A C G T G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--HACWCKRGTC
DGCACACGTG--
A C G T A C G T G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:HACWCKRGTC
-ACACGTGGC
G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C

HES6/MA1493.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:HACWCKRGTC
AACACGTGCC
G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-HACWCKRGTC
GAACAATGG--
A C G T G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:HACWCKRGTC
NACACGTGCN
G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

SOX2/MA0143.4/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-HACWCKRGTC
AAACAATGGAA
A C G T G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-HACWCKRGTC-----
GAGCCCTTGTCCCTAA
A C G T G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----HACWCKRGTC
VVRRAACAATGG--
A C G T A C G T A C G T A C G T G A C T C T G A T G A C G C T A G A T C A C T G C T G A T C A G C A G T A G T C
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T