| p-value: | 1e-10 |
| log p-value: | -2.348e+01 |
| Information Content per bp: | 1.906 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 0.83% |
| Number of Background Sequences with motif | 4.7 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 86.3 +/- 62.5bp |
| Average Position of motif in Background | 62.9 +/- 41.3bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATACAGGTCAAG ATCAAGGTCA-- |
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RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 2 |
| Score: | 0.73 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | ATACAGGTCAAG---- ----AGGTCAAGGTCA |
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RORB/MA1150.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATACAGGTCAAG AATTAGGTCAC- |
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|
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATACAGGTCAAG -CAAAGKTCAA- |
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|
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | ATACAGGTCAAG---- ----AGGTCAAGGTCA |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATACAGGTCAAG-- AAWCTAGGTCARDNN |
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|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATACAGGTCAAG ATAAGTAGGTCA-- |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATACAGGTCAAG AAYTAGGTCA-- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATACAGGTCAAG AAYTAGGTCA-- |
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|
|
NR2F1/MA0017.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATACAGGTCAAG-- -CAAAGGTCAAGGG |
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