Information for 17-GAGAGTCAAC (Motif 29)

A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G C G T A A G T C A C G T A G T C A C G T A G T C
p-value:1e-2
log p-value:-6.721e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif129.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background117.3 +/- 150.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAGAGTCAAC
AAAAGTCAA-
A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAGAGTCAAC---
-TATGTAAACANG
A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGTCAAC--
NNATGAGTCATNNN
A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T
A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGAGTCAAC-
NTGAGTCATCN
A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

ZNF652/MA1657.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAGAGTCAAC
GAAAGAGTTAAA
A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGAGTCAAC-
-TGAGTCAGCA
A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

FOS::JUND/MA1141.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGAGTCAAC-
GGATGAGTCATCG
A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T
A C T G C A T G T C G A A G C T A C T G G T C A T C A G A C G T G T A C C G T A A G C T T G A C T A C G

BATF/MA1634.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGTCAAC
NATGAGTCATN
A C G T A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C
C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A

BATF::JUN/MA0462.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGTCAAC
NATGAGTCATN
A C G T A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C
C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAGAGTCAAC----
NCWRWGTAAACANSV
A C G T A C T G C G T A A C T G C G T A A C T G A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G