Information for 3-CACCATAGCG (Motif 9)

A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T C G T A A C G T A C T G A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.118e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background182.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACCATAGCG
AAACCACAGC-
A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

OSR1/MA1542.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CACCATAGCG
NACAGTAGCN
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACCATAGCG--
CACCATATGGCG
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T A C G T
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACCATAGCG-
CTCACACAATGGCGC
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CACCATAGCG-----
TACCATAGCAACGGT
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACCATAGCG----
TNCCATAGCAACNN
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACCATAGCG
NWAACCACADNN
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RFX1/MA0509.2/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CACCATAGCG----
TNCCATAGCAACNN
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

YY2/MA0748.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CACCATAGCG---
--AGATGGCGGCG
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACCATAGCG--
CAAGATGGCGGC
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C