Information for 1-AGATTCGATA (Motif 3)

C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A G T C A C T G C G T A C G T A A C G T A G T C A C G T
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGATTCGATA-----
NNATNTGATANNNNN
C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PB0034.1_Irf4_1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGATTCGATA--
TNTGGTTTCGATACN
A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

ONECUT2/MA0756.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGATTCGATA--
AAAAAATCGATAAT
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

IRF6/MA1509.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGATTCGATA
AGTTTCGGT-
C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A
C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGATTCGATA---
NTGGTTTCGGTTNNN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

GATA1/MA0035.4/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGATTCGATA
NNAGATTAGAN-
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGATTCGATA---
TNAGTTTCGATTTTN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGATTCGATA--
AAAAAATCAATAAT
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGATTCGATA---
AAGATAAGATAACA
A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T
C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGATTCGATA---
BCWGATTCAATCAAN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T A G T C A C T G C G T A A C G T C G T A A C G T A C G T A C G T
A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A