| p-value: | 1e-3 |
| log p-value: | -9.110e+00 |
| Information Content per bp: | 1.634 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 40.00% |
| Number of Background Sequences with motif | 2297.4 |
| Percentage of Background Sequences with motif | 2.79% |
| Average Position of motif in Targets | 108.6 +/- 60.0bp |
| Average Position of motif in Background | 100.8 +/- 83.0bp |
| Strand Bias (log2 ratio + to - strand density) | 2.0 |
| Multiplicity (# of sites on avg that occur together) | 1.25 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GMAGAGCCATGC-- ----GGCCATTAAC |
|
|
|
YY2/MA0748.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GMAGAGCCATGC -CGCCGCCATNN |
|
|
|
ZFP42/MA1651.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GMAGAGCCATGC------ NNNNGGCAGCCATTTTGNNNN |
|
|
|
HOXD8/MA0910.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GMAGAGCCATGC- -----GCAATTAC |
|
|
|
HOXB8/MA1502.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GMAGAGCCATGC- -----GCAATTAC |
|
|
|
Isl1/MA1608.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GMAGAGCCATGC--- ----ATCCATTAGCA |
|
|
|
HOXA7/MA1498.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GMAGAGCCATGC- -----GCAATTAC |
|
|
|
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GMAGAGCCATGC-- ----RGCAATNAAA |
|
|
|
NFE2/MA0841.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GMAGAGCCATGC GATGAGTCATN- |
|
|
|
YY1/MA0095.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GMAGAGCCATGC-- --GCNGCCATCTTG |
|
|
|