Information for 25-CTGAAACTCAAG (Motif 27)

A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-8.713e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background135.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF6/MA1509.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGAAACTCAAG
ACCGAAACT----
A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTGAAACTCAAG
ACTGAAACCA---
A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGAAACTCAAG-
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

NKX2-5/MA0063.2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTGAAACTCAAG-
--ACCACTCAAAA
A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C G T
A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

PKNOX1/MA0782.2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGAAACTCAAG
NNGCTGTCACTCANN
A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTGAAACTCAAG
GSCTGTCACTCA--
A C G T A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTGAAACTCAAG
NCTGTCAATCAN-
A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGAAACTCAAG
SCTGTCAVTCAV-
A C G T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGAAACTCAAG-
-AAAACCTCAAAT
A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G A C G T
A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGAAACTCAAG
--AAAAGTCAA-
A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C C G T A C G T A A C T G
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T