Information for 15-ATCGCCTTTC (Motif 33)

C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C T G A C T G A G T C A C T G C G T A A C G T
p-value:1e-3
log p-value:-7.626e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background42.5 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATCGCCTTTC
GKMTCADRTTWC
A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCGCCTTTC---
-TGACCTTTNCNT
C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCGCCTTTC-
NNTGACCTTTNN
A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATCGCCTTTC---
NNGCACCTTTCTCC
A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCGCCTTTC
GKVTCADRTTWC
A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCGCCTTTC
AAGATATCCTT--
A C G T A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATCGCCTTTC----
---TTCTTTCTCTT
C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ATCGCCTTTC
NNGGCCACGCCTTTN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATCGCCTTTC--
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

SIX2/MA1119.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATCGCCTTTC----
GTATCAGGTTTCAGNN
A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T