Information for 15-GAGTCGTGAC (Motif 32)

A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.596e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background162.7 +/- 44.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GAGTCGTGAC--
NHGTCGTGAYDN
A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCGTGAC---
GAGGTCATGACCTC
A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGTCGTGAC---
GAGGTCATGACCTC
A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T C A G T C G A C A T G A C T G A C G T A G T C T C G A G A C T T C A G T G C A G T A C G A T C G A C T A G T C

PAX5/MA0014.3/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGTCGTGAC---
-GAGCGTGACCCC
A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAGTCGTGAC-
---NCGTGACN
A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GAGTCGTGAC-
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAGTCGTGAC---
CAAAGGCGTGGCCAG
A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

RARB(var.3)/MA1552.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAGTCGTGAC---
AAGGTCATGACCTT
A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A A C T G C A T G A G C T A G T C C T G A G A C T T C A G T G C A G T A C G A T C A G C T G A C T

HOXA9/MA0594.2/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGTCGTGAC--
--GTCGTAAACG
A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGTCGTGAC--
GTGGCGTGACNG
A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G