Information for 8-TATAGACAGACA (Motif 9)

A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A T G C A C G T A C T G A C G T A G T C C G A T G T C A A C G T C G T A
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.950
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 51.4bp
Average Position of motif in Background125.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TATAGACAGACA---
-----CCAGACRSVB
A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TATAGACAGACA
AGGTGHCAGACA
A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TATAGACAGACA-----
CAAATCCAGACATCACA
A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATAGACAGACA
CGTCTAGACA----
A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TATAGACAGACA-
-----CCAGACAG
A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0198.1_Zfp128_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TATAGACAGACA
NNTATANATATACN
A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TATAGACAGACA-
-----BCAGACWA
A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD5/MA1557.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TATAGACAGACA
TGTCTAGACA----
A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TATAGACAGACA
WWATRTAAACAN---
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATAGACAGACA
TCTAGACA----
A C G T C G T A A C G T C G T A A C T G C G T A A G T C C G T A A T C G C G T A A G T C C G T A
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T