Information for 2-GGGTTTTTGTGT (Motif 2)

C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A A G T C C G T A C T G A C G T A C G T A C T G A A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.370e+01
Information Content per bp:1.939
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif1332.5
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets93.6 +/- 46.3bp
Average Position of motif in Background95.2 +/- 105.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1D2/MA1532.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGTTTTTGTGT---
GGGTTAGTGGGTCAT
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
T C A G C A T G C A T G A C G T G A C T C G T A A T C G A C G T C T A G C A T G C T A G C A G T A G T C C T G A C A G T

Stat2/MA1623.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGTTTTTGTGT--
-NNTTTCTGTTTCT
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGTTTTTGTGT--
--BCCWTTGTBYKV
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTTGTGT---
GTNTTGTTGTGANNT
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGGTTTTTGTGT---
NNNCCATTGTGTNAN
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGGTTTTTGTGT------
--NNNNTTGTGTGCTTNN
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

SOX15/MA1152.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGTTTTTGTGT-
---CTATTGTTTT
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTTTTGTGT-
NNNTGTTGTTGTTNG
A C G T A C G T C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

ZNF384/MA1125.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGGTTTTTGTGT--
--TTTTTTTTTANN
C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGTTTTTGTGT
AGGVNCCTTTGT--
A C G T A C G T C T A G A C T G A C T G A G C T A C G T A C G T A G C T A C G T A C T G A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T