Information for 1-GTCTATAC (Motif 21)

A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C
Reverse Opposite:
A C T G A C G T C T G A A C G T C G T A A C T G T C G A A G T C
p-value:1e-3
log p-value:-8.191e+00
Information Content per bp:1.901
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif587.1
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets99.6 +/- 66.1bp
Average Position of motif in Background99.3 +/- 82.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GTCTATAC---
CGTCTACACGGG
A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C A C G T A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATAC-
TGTCTAGACG
A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C A C G T
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATAC-
TGTCTAGACA
A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C A C G T
C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTCTATAC-
-TCTAGACA
A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C A C G T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATAC
RRTCAATA-
A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCTATAC
TWGTCTGV--
A C G T A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GTCTATAC-----
ANNNGGATATATCCNNN
A C G T A C G T A C G T A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCTATAC--
NTGTTTAYATWW
A C G T A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCTATAC--
AGGTCTCTAACC
A C G T A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------GTCTATAC
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C A C G T C G T A A G C T C G T A A G T C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C