Information for 18-AATCATCTTTAT (Motif 22)

C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A C G T A A C T G C G T A A C G T A C T G C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.774e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif154.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets104.0 +/- 72.0bp
Average Position of motif in Background95.1 +/- 74.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATCATCTTTAT
CTAATCCTCTT---
A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AATCATCTTTAT
TAGTGATCATCATTA-
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATCATCTTTAT
CCAATCAA------
A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AATCATCTTTAT
AAGGCGAAATCATCGCA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATCATCTTTAT----
AAAACATCGTTTTTAAG
A C G T C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

Ptf1a/MA1618.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AATCATCTTTAT
NNAACATCTGTNN
A C G T C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

FOXL1/MA0033.2/Jaspar

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AATCATCTTTAT
-----TGTTTAC
C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AATCATCTTTAT
--NVWTGTTTAC
C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AATCATCTTTAT----
----NTGTTTAYATWW
C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:AATCATCTTTAT--
-----TGTTTATTT
C G T A C G T A A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T