Information for 3-GGCCGTAA (Motif 38)

A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C T G A C T G A G T C A G T C
p-value:1e-2
log p-value:-5.315e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background92.7 +/- 76.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA9/MA0594.2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGCCGTAA---
-GTCGTAAACG
A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGCCGTAA------
TTAGGTCGTAAAATTTC
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

HOXD10/MA1506.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCCGTAA---
GGTCGTAAAAC
A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCCGTAA---
GGTCGTAAAAA
A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PB0143.1_Klf7_2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GGCCGTAA----
NNNTNGGGCGTATNNTN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGCCGTAA------
CAAGGTCGTAAAATCTT
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCCGTAA
GGCVGTTR
A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PH0065.1_Hoxc10/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGCCGTAA-----
TAAAGTCGTAAAACGT
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCCGTAA------
TAAGGTCGTAAAATCCT
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCCGTAA---
AGTCGTAAAAA
A C T G A C T G A G T C A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A