Information for 8-GAAGAGGGCACC (Motif 8)

A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAAGAGGGCACC
--NGTGGGCAT-
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GAAGAGGGCACC----
GCCASCAGGGGGCGCYVNNG
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCFL/MA1102.2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAGAGGGCACC
AGCAGGGGGCGC-
A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAAGAGGGCACC--
TCTCAAAGGTCACCTG
A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGAGGGCACC
--AGRGGTCA--
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGAGGGCACC
--TRAGGTCA--
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAAGAGGGCACC
---AAGGTCAC-
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAAGAGGGCACC
CAAGATGGCGGC
A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAGGGCACC---
NNNNTTGGGCACNNCN
A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGAGGGCACC
NNAGGGACAAGGGCNC-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C T G A C T G A G T C C G T A A G T C A G T C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T