Information for 2-TATACGTGGTAT (Motif 2)

A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A G T C C G T A A G T C C T A G A G C T C G T A A C G T C G T A
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.942
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 44.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TATACGTGGTAT-
-NNHTGTGGTTWN
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TATACGTGGTAT
-RTACGTGC---
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TATACGTGGTAT-
NTTAAGTGGTTNN
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TATACGTGGTAT
-GGACGTGC---
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TATACGTGGTAT
NACACGTGCN--
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TATACGTGGTAT
-TTAAGTGGT--
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TATACGTGGTAT
--TGCGTG----
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TATACGTGGTAT
--NNTGTGGTTT
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TATACGTGGTAT
GGGTACGTGC---
A C G T A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TATACGTGGTAT
--CACGTGGN--
A C G T C G T A A C G T C T G A A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T A C G T