Information for 2-ACCTCGTA (Motif 20)

C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C T G G T C A A T C G A C T G A C G T
p-value:1e-11
log p-value:-2.587e+01
Information Content per bp:1.941
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets98.1 +/- 57.4bp
Average Position of motif in Background102.6 +/- 47.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACCTCGTA------
AAACCTCGTAAAATTT
A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACCTCGTA----
-GCTCGTAAAAA
C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ACCTCGTA------
AAAGCTCGTAAAATTT
A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

HOXA9/MA0594.2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ACCTCGTA----
--GTCGTAAACG
C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ACCTCGTA---
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACCTCGTA-------
CAAGGTCGTAAAATCTT
A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

Dmrt1/MA1603.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACCTCGTA--
GNTACTTTGTATC
A C G T A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

PH0067.1_Hoxc12/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCTCGTA-------
TTAGGTCGTAAAATTTC
A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCTCGTA------
TAAAGTCGTAAAATAG
A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCTCGTA-------
TAAGGTCGTAAAATCCT
A C G T A C G T C G T A A G T C A T G C A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T