Information for 12-TGCTGCTGCT (Motif 24)

G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T
Reverse Opposite:
C T G A T A C G G T A C T C G A T A C G A T G C T C G A A T C G T G A C C G T A
p-value:1e-5
log p-value:-1.227e+01
Information Content per bp:1.593
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif2.90%
Number of Background Sequences with motif497.3
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets103.5 +/- 52.4bp
Average Position of motif in Background101.8 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTGCT-----
AGATGCTRCTRCCHT
G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTGCT
AGCAGCTGCT
G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTGCT--
DGCAGCTGCYSS
G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T A C G T A C G T
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCTGCTGCT
NNAGCAGCTGCT
A C G T A C G T G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTGCTGCT-
GTCTGTTTCTA
G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T A C G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCTGCTGCT----
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

ASCL1/MA1100.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCTGCTGCT
GGCAGCTGCC
G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T
T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C

MYOG/MA0500.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCTGCTGCT-
CAGCAGCTGCTG
A C G T G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

OSR2/MA1646.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTGCT-
NNGCTTCTGTNN
A C G T G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTGCT
NNCCTGCTGNG
A C G T G C A T A C T G T A G C A G C T T A C G A T G C A G C T C A T G A T G C G A C T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G