Information for 4-GAGAATCWGTTC (Motif 5)

A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
Reverse Opposite:
A C T G C G T A G C T A G T A C G C T A C T A G G T C A A C G T A C G T T A G C G A C T G T A C
p-value:1e-5
log p-value:-1.266e+01
Information Content per bp:1.655
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif1989.1
Percentage of Background Sequences with motif2.39%
Average Position of motif in Targets60.6 +/- 46.7bp
Average Position of motif in Background99.4 +/- 81.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2/MA1105.2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGAATCWGTTC-
-NAAACCTGTTTN
A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C A C G T
A C G T G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAGAATCWGTTC
NAGAAACAGNN-
A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGAATCWGTTC
CGACCATCTGTT-
A C G T A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGAATCWGTTC
---TGTCGGTT-
A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
A C G T A C G T A C G T C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------GAGAATCWGTTC
TTGACCGAGAATTCC---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGAATCWGTTC
-ACCATCTGTT-
A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAGAATCWGTTC--
--WAABTAGGTCAV
A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C A C G T A C G T
A C G T A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

TFCP2/MA0145.3/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGAATCWGTTC
--AAACCGGTTT
A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GAGAATCWGTTC
GNNACCGAGAATNNN---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGAATCWGTTC
-RCCATMTGTT-
A C T G C G T A A T C G G T C A G T C A C A G T A G T C C G A T A C T G C A G T A C G T T A G C
A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T