Information for 5-GGCACCAG (Motif 36)

A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C G T A C T G A G T C A G T C
p-value:1e-2
log p-value:-4.654e+00
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif9197.9
Percentage of Background Sequences with motif12.01%
Average Position of motif in Targets144.1 +/- 26.6bp
Average Position of motif in Background100.7 +/- 72.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GGCACCAG--
NNTGGCCCCAGNN
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

TCF4/MA0830.2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGCACCAG----
CGGCACCTGCCCC
A C G T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

ZBTB6/MA1581.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGCACCAG---
NNGGCTCAAGGNN
A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCACCAG---
SNGCACCTGCHS
A C G T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

SNAI2/MA0745.2/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCACCAG----
ATGCACCTGTCAT
A C G T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GGCACCAG--
NNCACCTGNN
A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCACCAG----
CAGCACCTGCCCC
A C G T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

SNAI1/MA1558.1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGCACCAG--
NGCACCTGCN
A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T
G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGCACCAG---
CCCACCTGCGC
A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T
A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGCACCAG
NGTGGGCAT---
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C C G T A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T