Information for 16-GATCATACAT (Motif 35)

A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C G T A G T C
p-value:1e-2
log p-value:-6.849e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background126.1 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GATCATACAT-
NTTGATACATT
A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GATCATACAT
GAATATTCAT
A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GATCATACAT
--TCACACCT
A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

PBX2/MA1113.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATCATACAT----
-GTCATAAATCATT
A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

DPRX/MA1480.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATCATACAT
AGATAATCCC-
A C G T A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GATCATACAT-----
NNCCATAAATCATNN
A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATCATACAT
TGAATTATGCAT
A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GATCATACAT
--TCACACCT
A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GATCATACAT
GHATATKCAT
A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GATCATACAT
NGGATTAN----
A C G T A C G T A C T G C G T A A C G T A G T C C G T A A C G T C G T A A G T C C G T A A C G T
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T