Information for 14-CAGGGTGAATGG (Motif 15)

A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.075e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYC/MA1644.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAGGGTGAATGG--
---NCTGATTGGNN
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGGGTGAATGG-----
---GGAGAAAGGTGCGA
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAGGGTGAATGG--
---NCTGATTGGNN
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGGGTGAATGG--
----GTTAATGGCC
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

KLF17/MA1514.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGTGAATGG--
AAGGGGTGCGTGGTG
A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CAGGGTGAATGG
NMMNBAAAGGGTTAA---
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T

THRB/MA1574.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGGGTGAATGG----
-GGGGTCAAAGGTCAT
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CAGGGTGAATGG-----
-----TGATTGGCTANN
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CAGGGTGAATGG--
----GTGAGTGNAC
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

PPARD/MA1550.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAGGGTGAATGG----
AGGGGTCAAAGGTCAA
A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T C A