Information for 3-GTCTTAGGCMAG (Motif 3)

A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G
Reverse Opposite:
T A G C C G A T A C T G T A C G A T G C T G A C C G A T T G C A C G T A T A C G C G T A T A G C
p-value:1e-5
log p-value:-1.200e+01
Information Content per bp:1.635
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif1949.5
Percentage of Background Sequences with motif2.46%
Average Position of motif in Targets89.8 +/- 59.2bp
Average Position of motif in Background100.1 +/- 74.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLF/MA0043.3/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GTCTTAGGCMAG--
TTGTTATGCAACAA
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G A C G T A C G T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

NFIL3/MA0025.2/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCTTAGGCMAG--
-TATTATGCAATAT
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G A C G T A C G T
A C G T C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTCTTAGGCMAG
--RTTATGYAAB
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G
A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTCTTAGGCMAG
NNNNNRTTACGTAAB
A C G T A C G T A C G T A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G
A G C T T G C A T C G A G A T C C A G T T C G A A C G T A C G T C T G A A G T C C T A G G A C T G T C A C G T A A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTCTTAGGCMAG---
----AAGGCAAGTGT
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCTTAGGCMAG
---TTATGCAAT
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G
A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCTTAGGCMAG
--MTGATGCAAT
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GTCTTAGGCMAG
--ATGATGCAAT
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCTTAGGCMAG
-NATGTTGCAA-
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GTCTTAGGCMAG---
AAATGATGCAATCAT
A C T G C G A T A G T C A C G T A C G T C G T A A C T G A T C G A G T C T G A C C G T A A C T G A C G T A C G T A C G T
C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T