Information for 1-CATTTGTCDCAC (Motif 1)

A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
Reverse Opposite:
A T C G A G C T A C T G G A C T C T A G C G T A A G T C G T C A C G T A C G T A A C G T C T A G
p-value:1e-7
log p-value:-1.818e+01
Information Content per bp:1.778
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif182.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets117.8 +/- 51.8bp
Average Position of motif in Background101.8 +/- 80.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CATTTGTCDCAC-
NNAATTAGTCACGGT
A C G T A C G T A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CATTTGTCDCAC
CCATTGTTNY--
A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATTTGTCDCAC
CCTTTGTTTT--
A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATTTGTCDCAC
CCWTTGTY----
A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATTTGTCDCAC--
GNNATTTGTCGTAANN
A C G T A C G T A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CATTTGTCDCAC-
ANTCCTTTGTCTNNNN
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CATTTGTCDCAC
CGCCATATGTCC---
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
A T G C T C A G A T G C A T G C C T G A G C A T C G T A A G C T A T C G A C G T A G T C T A G C A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGTCDCAC
NCCTTTGTTC---
A C G T A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CATTTGTCDCAC
GACATATGTT----
A C G T A C G T A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATTTGTCDCAC
NNCTTTGTTNN--
A C G T A G T C C G T A A C G T A C G T A C G T C T A G A C G T A G T C C G T A G T A C C T G A A T G C
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T