Information for 2-CTACAATTCG (Motif 6)

A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C G T A C G T A C T G A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.953e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTACAATTCG-
ACTACAATTCCC
A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CTACAATTCG---
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTACAATTCG
NNCNNAACAATTNT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

THAP11/MA1573.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTACAATTCG-----
AGGACTACATTTCCCAGCA
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C G A T C A G C T A G T G C A A G T C G A C T G T C A A G T C T C G A G C A T A G C T A G C T G A T C A G T C A G T C C T G A C T A G T G A C T C G A

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CTACAATTCG--
NNNNNGAACAATTGANN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTACAATTCG
-AACAAT---
A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTACAATTCG
RNAACAATGG-
A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTACAATTCG--------
AACTACAATTCCCAGAATGC
A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTACAATTCG--------
RACTACAACTCCCAGVAKGC
A C G T A C G T A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTACAATTCG
NAACAAT---
A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C G T A G T C A C T G
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T