Information for 1-TACCTTATATTA (Motif 1)

A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A
Reverse Opposite:
A C G T C G T A C G T A A C G T C G T A A G C T G T C A C G T A A C T G C T A G A C G T C G T A
p-value:1e-5
log p-value:-1.363e+01
Information Content per bp:1.775
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif719.3
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets120.3 +/- 82.1bp
Average Position of motif in Background99.7 +/- 106.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TACCTTATATTA---
NANTATTATAATTNNN
A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TACCTTATATTA
TNTTATCTTATCTT-
A C G T A C G T A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TACCTTATATTA---
TAAGATTATAATACGG
A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TACCTTATATTA---
NNTAATTATAATNANN
A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A A C G T A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

Dmrt1/MA1603.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TACCTTATATTA
GNTACTTTGTATC-
A C G T A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TACCTTATATTA----
TNAATTTTATTACCTN
A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A A C G T A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PB0105.1_Arid3a_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----TACCTTATATTA
ACCCGTATCAAATTT--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TACCTTATATTA----
NTNAATTTTATTGNATT
A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TACCTTATATTA---
NNTAATTATAATTNNN
A C G T A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PH0038.1_Hlx/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TACCTTATATTA---
TGTAATTAATTATGG
A C G T C G T A A G T C G T A C C G A T C A G T C T G A C G A T C G T A C G A T A C G T G T C A A C G T A C G T A C G T
C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G