Information for 2-MTGAMAAGAATS (Motif 2)

G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C
Reverse Opposite:
A T C G C G T A C G A T C G A T A G T C G A C T A C G T A C T G A C G T A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.738e+01
Information Content per bp:1.788
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif313.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets99.5 +/- 85.1bp
Average Position of motif in Background93.7 +/- 77.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:MTGAMAAGAATS
TTGACAG-----
G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-MTGAMAAGAATS-
NNTNTCATGAATGT
A C G T G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:MTGAMAAGAATS
TTGACAGG----
G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-MTGAMAAGAATS
RHTGWCAR-----
A C G T G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:MTGAMAAGAATS-
-TGACAGGTGTCA
G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C A C G T
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----MTGAMAAGAATS-
TAAACTGATAAGAAGAT
A C G T A C G T A C G T A C G T G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----MTGAMAAGAATS-
TATAGAGATAAGAATTG
A C G T A C G T A C G T A C G T G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:MTGAMAAGAATS
TTGACAGC----
G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--MTGAMAAGAATS
ARNTGACA------
A C G T A C G T G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-MTGAMAAGAATS
NVAGATAAGR---
A C G T G T A C C G A T A C T G C G T A G T A C C G T A C G T A A C T G C G T A C G T A A C G T A T G C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T