Information for 1-GAGCTGGGAT (Motif 3)

C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T
Reverse Opposite:
G T C A A C G T A G T C A G T C A G T C C G T A A C T G A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.236e+01
Information Content per bp:1.905
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif284.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets114.0 +/- 23.7bp
Average Position of motif in Background100.3 +/- 72.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GAGCTGGGAT--
--GCAGTGATTT
C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAGCTGGGAT--
-TGCTGTGATTT
C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGCTGGGAT
NAACAGCTGG---
A C G T A C G T A C G T C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAGCTGGGAT--
--CCTGGGAAAG
C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGCTGGGAT------
TATTATGGGATGGATAA
A C G T C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTGGGAT
NNCAGCTGNN--
A C G T A C G T C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCTGGGAT
-VGCTGGCA-
C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T
A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCTGGGAT
CACAGCAGGGG-
A C G T A C G T C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCTGGGAT
CACAGCAGGGGG
A C G T A C G T C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCTGGGAT
WDNCTGGGCA
C T A G C G T A A C T G A G T C C G A T A C T G A C T G A C T G C G T A A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A