Information for 1-CAGACCTT (Motif 8)

A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G A C G T G T A C C G A T A C T G
p-value:1e-5
log p-value:-1.199e+01
Information Content per bp:1.922
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif2292.4
Percentage of Background Sequences with motif2.74%
Average Position of motif in Targets106.3 +/- 30.3bp
Average Position of motif in Background99.6 +/- 85.4bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F2/MA1111.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCTT--
NNTGACCTTTN
A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CAGACCTT--
NTGACCTTGA
A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAGACCTT--
ATGACCTTGA
A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

NR5A1/MA1540.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAGACCTT---
NTGACCTTGAN
A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

NR4A1/MA1112.2/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCTT---
NNTGACCTTTNN
A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T A C G T
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGACCTT----
GTGACCTTGRVN
A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

ESRRA/MA0592.3/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CAGACCTT----
NNTGACCTTGANN
A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CAGACCTT---
-TGACCTTGAV
A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CAGACCTT---
-TGACCTTGAN
A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGACCTT
TTCACACCTT
A C G T A C G T A G T C C G T A A C T G C G T A A G T C A G T C C G A T A C G T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T