Information for 7-CCTAAAGGGC (Motif 27)

A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A G T C A C G T A C G T A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background84.6 +/- 77.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTAAAGGGC-
TGCCCTNAGGGCA
A C G T A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTAAAGGGC--
NBYCAAGGTCAC
A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCTAAAGGGC---
-TTAAAGGTCAAA
A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T
A C G T C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTAAAGGGC
NNCTAATGGNN
A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTAAAGGGC
GCTAAACGGT
A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

BARHL1/MA0877.2/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTAAAGGGC
-CTAAACGG-
A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C
A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCTAAAGGGC-
TGCCCNNAGGGCA
A C G T A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTAAAGGGC-----
TCTCAAAGGTCACGAG
A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCTAAAGGGC-
TGCCCTNAGGGCA
A C G T A C G T A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTAAAGGGC
-CTAATKGV-
A G T C A G T C A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T