Information for 4-ATCGAGCG (Motif 41)

C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A G T C A C T G C G T A A C G T
p-value:1e-2
log p-value:-6.193e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background114.9 +/- 47.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATCGAGCG----
TTGACCGAGAATTCC
A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCGAGCG
NTATYGATCH
A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATCGAGCG
---CAGCC
C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCGAGCG-
TATCGATNAN
A C G T C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G A C G T
A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCGAGCG--
BTBRAGTGSN
C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G A C G T A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATCGAGCG
GRTGMTRGAGCC
A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATCGAGCG----
NNNACCGAGAGTNNN
A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCGAGCG
TATTGAYY-
A C G T C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G
G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCGAGCG---
-TTGAGTGSTT
C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

CUX1/MA0754.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ATCGAGCG
NTATCGATTA
A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C T G A G T C A C T G
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A