Information for 4-GAGASKATTCTC (Motif 4)

A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C
Reverse Opposite:
A C T G C G T A C T A G G T C A C G T A A C G T G T C A T A G C A C G T A G T C A C G T A T G C
p-value:1e-14
log p-value:-3.335e+01
Information Content per bp:1.820
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif19.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets98.7 +/- 60.8bp
Average Position of motif in Background120.8 +/- 35.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GAGASKATTCTC------
---AGTATTCTCGGTTGC
A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GAGASKATTCTC------
---NNAATTCTCGNTNAN
A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GAGASKATTCTC
NNCNNAACAATTNT-
A C G T A C G T A C G T A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGASKATTCTC---
NTNNNAGGAGTCTCNTN
A C G T A C G T A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

DPRX/MA1480.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GAGASKATTCTC-
---NGGATTATCT
A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C A C G T
A C G T A C G T A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGASKATTCTC
---CTCATTGTC
A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C
A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:GAGASKATTCTC--
----CTATTTTTGG
A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GAGASKATTCTC---
TAGAANVTTCTAGAA
A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C A C G T A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GAGASKATTCTC--------
YTKGATAHAGTATTCTWGGTNGGCA
A C G T A C G T A C G T A C G T A C G T A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G C A T A C T G C T A G C T G A A G C T G C T A G C T A C T G A T C A G G C A T T G C A A C G T A C G T G A T C G A C T G C A T C T A G T A C G G A C T C T A G C A T G C T A G G T A C T C G A

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GAGASKATTCTC
AAGAGGATTAG-
A T C G C G T A C T A G C G T A A T C G A C G T G T C A A C G T A C G T A G T C A C G T G T A C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T