Information for 25-AGACACAGAAGT (Motif 27)

C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C T G A C G T A G T C A C G T
p-value:1e-4
log p-value:-9.756e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background125.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGACACAGAAGT
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGACACAGAAGT--
--AAACAGAAGCAG
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

PRDM4/MA1647.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGACACAGAAGT
NAGAAACAGNN--
A C G T C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGACACAGAAGT
AGAAACGAAAGT
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Stat2/MA1623.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGACACAGAAGT-
AGAAACAGAAACT
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGACACAGAAGT
--ACVAGGAAGT
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T
A C G T A C G T G C T A A G T C T A C G T G C A A T C G T C A G G C T A T C G A T C A G A G C T

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGACACAGAAGT---
--AAACAGATGTTTA
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

ELF4/MA0641.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGACACAGAAGT-
-AACCCGGAAGTG
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T
A C G T C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G

ELF2/MA1483.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGACACAGAAGT-
-AACCCGGAAGTA
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T
A C G T C G T A G C T A G T A C T A G C G T A C A C T G C T A G T C G A G C T A T C A G G A C T T C G A

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGACACAGAAGT-
--ACCCGGAAGTA
C G T A A C T G C G T A A G T C C G T A A G T C C G T A A C T G C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A