Information for 4-ACAAGGGGCTCA (Motif 6)

C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C T G A C G T
p-value:1e-4
log p-value:-9.768e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACAAGGGGCTCA
ACAAAGGNBCCT
C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACAAGGGGCTCA
-NRRGGGTCTT-
C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACAAGGGGCTCA
-HAWGRGGCCM-
C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T

CTCFL/MA1102.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACAAGGGGCTCA
AGCAGGGGGCGC-
A C G T C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ACAAGGGGCTCA
NNTNNACAATGGGANNN
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ACAAGGGGCTCA
GAACAATGGN----
A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAAGGGGCTCA
RACAAWGG-----
A C G T C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAAGGGGCTCA
VRRACAAWGG-----
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:ACAAGGGGCTCA-----
----NNGGCTCAAGGNN
C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

SOX4/MA0867.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACAAGGGGCTCA
GAACAAAGGG----
A C G T A C G T C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C T G A G T C A C G T A G T C C G T A
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T A C G T A C G T