Information for 6-ATCAATCCAA (Motif 13)

C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C T A G C G T A A C G T A C G T A C T G G T C A A C G T
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.953
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif40.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets86.0 +/- 44.3bp
Average Position of motif in Background117.4 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--ATCAATCCAA
CCATCAATCAAA
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATCAATCCAA
HNRAATCAAT----
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATCAATCCAA
GTCATCAATCATT
A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATCAATCCAA-----
AATCAATTCAATAATT
A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATCAATCCAA--
GAAGATCAATCACTTA
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATCAATCCAA
YCATCMATCA--
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATCAATCCAA
DGATCRATAN--
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATCAATCCAA
RRTCAATA---
A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATCAATCCAA--
GAAGATCAATCACTAA
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATCAATCCAA--
ATAAACAATTAAACA
A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A