Information for 3-AAAATCGGGT (Motif 11)

C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-9.056e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background151.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAAATCGGGT--
AAAACCGGTTTT
C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAAATCGGGT-----
AAAACCTGGANHGGR
C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

Prdm15/MA1616.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAAATCGGGT--
AGGAAAACCTGGAGC
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

TFCP2/MA0145.3/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAATCGGGT-
-AAACCGGTTT
C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AAAATCGGGT--
NNTNNACAATGGGANNN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAATCGGGT
CCAAAAATAG---
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAAATCGGGT
CGACCATCTGTT
A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAAATCGGGT-
TACATCCGGGT
C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAATCGGGT---
-WAABTAGGTCAV
C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

PB0136.1_IRC900814_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAATCGGGT--
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C G T A G T C A C T G A C T G A C T G A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A