Information for 2-TCCTACGT (Motif 27)

A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T C G T A A T C G A C T G C G T A
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.961
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif29.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets93.6 +/- 32.6bp
Average Position of motif in Background99.0 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCCTACGT------
NNNTNGTACGTAANNNN
A C G T A C G T A C G T A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TCCTACGT------
NNNTNGTACGTAANNNN
A C G T A C G T A C G T A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

GMEB2/MA0862.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCCTACGT--
--TTACGTAA
A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TCCTACGT---
---TACGTGCV
A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCCTACGT--
GGGTACGTGC
A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCCTACGT---
---TACGTCAT
A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

HIF1A/MA1106.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCCTACGT----
--GTACGTGCCC
A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCTACGT--
--RTACGTGC
A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCTACGT--
--GGACGTGC
A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

ZNF75D/MA1601.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCCTACGT
TTTCCCACAN
A C G T A C G T A C G T A G T C A T G C A C G T C G T A A G T C A C T G A C G T
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T