Information for 4-CYCTSWGAGRSK (Motif 4)

A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
Reverse Opposite:
G T A C A T G C A G T C A G T C A C G T A G T C C G A T A T C G C G T A A C T G C T G A A C T G
p-value:1e-11
log p-value:-2.747e+01
Information Content per bp:1.817
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 32.4bp
Average Position of motif in Background109.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CYCTSWGAGRSK-
CTCCCTGGGAGGCCN
A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CYCTSWGAGRSK
VCCTCTCTGDDY--
A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CYCTSWGAGRSK
-CTTGAGTGGCT
A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CYCTSWGAGRSK
-GCTGTG-----
A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CYCTSWGAGRSK
TCCTTTGATGT-
A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CYCTSWGAGRSK
ATGCCCTGAGGC---
A C G T A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CYCTSWGAGRSK
TCCCCTGGGGAC
A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CYCTSWGAGRSK-
---HAWGRGGCCM
A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G A C G T
A C G T A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CYCTSWGAGRSK
WTGSCCTSAGGS---
A C G T A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CYCTSWGAGRSK
NNGCNCTGCGCGGC-
A C G T A C G T A C G T A G T C A G C T A G T C A C G T A T G C C G T A A C T G C G T A A C T G C T A G A T C G A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T