Information for 1-TGCACGTATA (Motif 24)

A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C C G T A
p-value:1e-3
log p-value:-9.183e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background120.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TGCACGTATA
-GCACGTAY-
A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:TGCACGTATA
BGCACGTA--
A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TGCACGTATA-
-GCACGTACCC
A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A A C G T
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF1A/MA1106.1/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGCACGTATA
NNGCACGTNC-
A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TGCACGTATA
-GCACGTNC-
A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCACGTATA
GGCACGTGTC
A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TGCACGTATA-
TACATGTGCACATAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Mlxip/MA0622.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCACGTATA
-GCACGTGT-
A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T

PB0111.1_Bhlhb2_2/Jaspar

Match Rank:9
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TGCACGTATA------
ACCGCCNTCCACGTGTANNGACA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A T C G A T C C A T G T A G C G A T C G A C T C A G T T G A C G T A C C T G A A G T C T C A G G A C T A C T G A C G T G T C A C T G A G A C T T A C G C T G A G A T C C T G A

HES6/MA1493.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCACGTATA
GGCACGTGTT
A C G T A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T