Information for 24-CCACGAGAGA (Motif 35)

A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T A G T C A C T G A C G T A C T G A C T G
p-value:1e-2
log p-value:-6.599e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background44.1 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCACGAGAGA
NCCACGTG---
A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCACGAGAGA
KCCACGTGAC-
A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCACGAGAGA-
NAGNTCTCGCGAGAN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

TFEC/MA0871.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCACGAGAGA
CCCACGTGACC
A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
G T A C T A G C A T G C C G T A A G T C C T A G A C G T A T C G T G C A A G T C T G A C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACGAGAGA
GGTCACGTGA--
A C G T A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCACGAGAGA
NCACGTGACN
A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCACGAGAGA---
NNNACCGAGAGTNNN
A C G T A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCACGAGAGA
GCCACGTGT--
A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACGAGAGA---
ATAACCACTTGAAAATT
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCACGAGAGA
NVCACGTG---
A C G T A G T C A G T C C G T A A G T C A C T G C G T A A C T G C G T A A C T G C G T A
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T