Information for 19-TAGCCCACTC (Motif 29)

A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G G T C A A C T G A C G T A C T G A T C G A C T G A G T C A C G T C G T A
p-value:1e-3
log p-value:-7.768e+00
Information Content per bp:1.950
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.2 +/- 47.5bp
Average Position of motif in Background93.8 +/- 67.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TAGCCCACTC----
NNAGTCCCACTCNNNN
A C G T A C G T A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAGCCCACTC--
--GTACACTCAC
A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAGCCCACTC-----
-TAACCACTCAAGAA
A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TAGCCCACTC---
-AGACCACCCASR
A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAGCCCACTC-
-CRCCCACGCA
A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGCCCACTC-
YCCGCCCACGCN
A C G T A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

EGR1/MA0162.4/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAGCCCACTC--
CCACGCCCACGCCC
A C G T A C G T A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T A C G T
T G A C A T G C T G C A A G T C C T A G A T G C T A G C A T G C T G C A A T G C T C A G A G T C T G A C A T G C

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAGCCCACTC-
ACGCCCACGCA
A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAGCCCACTC--
--AASCACTCAA
A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

EGR4/MA0733.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAGCCCACTC----
TTACGCCCACGCATTT
A C G T A C G T A C G T C G T A A C T G A G T C A T G C A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T