Information for 4-GGTACGATTA (Motif 9)

A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A G T C A C T G A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-9.097e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGTACGATTA-
--ACCGATTAG
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

BARX1/MA0875.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGTACGATTA-
---GCAATTAG
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTACGATTA-
---CGGATTAN
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

BARHL1/MA0877.2/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTACGATTA-
---NCGTTTAN
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G

BSX/MA0876.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGTACGATTA-
---CCAATTAA
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGTACGATTA-
---RGGATTAR
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGTACGATTA--
--GNGGATTAGN
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGTACGATTA--
----GGATTAGC
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTACGATTA-
-AAACMATTAN
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTACGATTA--
--NNGGATTAGN
A C T G A C T G A C G T C G T A A G T C A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C