Information for 8-GAAGCAGGTTAG (Motif 8)

A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C G T A G T C
p-value:1e-13
log p-value:-3.148e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.5 +/- 34.3bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2/MA1105.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAAGCAGGTTAG
AAAACAGGTTTT
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAAGCAGGTTAG
-AAGAGGATTAG
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAAGCAGGTTAG---
----CAGGTAAGTAT
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAAGCAGGTTAG
WAABTAGGTCAV
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCAGGTTAG
NGAAGC-------
A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAGCAGGTTAG
-NNGCAGGTGNN
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAAGCAGGTTAG
--RGCAGGTGYA
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
A C G T A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAAGCAGGTTAG
CACAGCAGGGG--
A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T

TCF3/MA0522.3/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAGCAGGTTAG
-NNGCAGGTGNN
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
A C G T T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

RORB/MA1150.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAGCAGGTTAG
-AATTAGGTCAC
A C T G C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C G T C G T A A C T G
A C G T C G T A G C T A C G A T A C G T C T G A A C T G C T A G A G C T G A T C C T G A G A T C