Information for 10-ATCATCACGC (Motif 20)

C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A C T G C G T A A C G T A C T G C G T A A C G T
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.6 +/- 22.2bp
Average Position of motif in Background123.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:ATCATCACGC-
-----CACGCA
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----ATCATCACGC
TAGTGATCATCATTA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATCATCACGC---
---ATCACCCCAT
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATCATCACGC
--AGTCACGC
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATCATCACGC--
--TBGCACGCAA
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PAX5/MA0014.3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCATCACGC--
NNGGTCACGCTC
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATCATCACGC---
---ATCACCCCAC
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCATCACGC---
-NHRTCACGACDN
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATCATCACGC---
---ATCACCCCAT
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

TFE3/MA0831.2/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ATCATCACGC-
---GTCACGTG
C G T A A C G T A G T C C G T A A C G T A G T C C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G