Information for 3-TGCCCATT (Motif 22)

C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T
Reverse Opposite:
C G T A G T C A A C G T A T C G A C T G A C T G A G T C C G T A
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.900
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif1346.2
Percentage of Background Sequences with motif2.79%
Average Position of motif in Targets96.5 +/- 52.2bp
Average Position of motif in Background101.6 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.83
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCATT---
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TGCCCATT
ATGCCCACC
A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCCCATT
CTGCCCGCA
A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCCCATT--
TGCCCAGNHW
C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T A C G T A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGCCCATT
GGTGCCAAGT
A C G T A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGCCCATT-------
TGTTCCCATTGTGTACT
A C G T A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

RBPJ/MA1116.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCATT
NNTTCCCANN
A C G T A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCCCATT---
-GGCCATTAAC
C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T A C G T A C G T A C G T
A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCATT-
TTCCCCCTAC
A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T A C G T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGCCCATT
CGTGCCAAG-
A C G T A C G T C G A T A C T G A G T C A G T C A T G C C G T A A C G T C G A T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T