Information for 15-AAACTTACAGAC (Motif 15)

C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A C G T
p-value:1e-3
log p-value:-9.153e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background176.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAACTTACAGAC--
--GGTTAGAGACCT
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AAACTTACAGAC----
------CCAGACRSVB
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAACTTACAGAC-
-AGGTGHCAGACA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AAACTTACAGAC--
------CCAGACAG
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAACTTACAGAC-----
AAATTTGCTGACTTAGA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAACTTACAGAC
CAAGCTT------
A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAACTTACAGAC------
-CAAATCCAGACATCACA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAACTTACAGAC--
AAAAATAACAAACGG
A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AAACTTACAGAC--
------BCAGACWA
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AAACTTACAGAC--
-AGGTGNCAGACAG
C G T A C G T A C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G