Information for 3-AHGAGTVACTTG (Motif 3)

C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
Reverse Opposite:
A T G C C T G A G T C A A C T G A C G T A C T G G T C A A G T C A C G T A G T C C A T G C G A T
p-value:1e-4
log p-value:-1.099e+01
Information Content per bp:1.692
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1716.8
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets139.8 +/- 30.7bp
Average Position of motif in Background97.8 +/- 106.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BATF3/MA0835.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AHGAGTVACTTG
NATGAGTCATN--
A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A A C G T A C G T

BATF::JUN/MA0462.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AHGAGTVACTTG
NATGAGTCATN--
A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AHGAGTVACTTG
AAAAGTCAA---
C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

BATF/MA1634.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AHGAGTVACTTG
NATGAGTCATN--
A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A A C G T A C G T

FOSL1/MA0477.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AHGAGTVACTTG
NNATGAGTCATNN-
A C G T A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
C T A G C T A G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AHGAGTVACTTG
NTNNNAGGAGTCTCNTN
A C G T A C G T A C G T A C G T A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

JUND/MA0491.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AHGAGTVACTTG
NNATGAGTCATNN-
A C G T A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
C T A G C A T G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A A C G T

JUNB/MA0490.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AHGAGTVACTTG
NNATGAGTCATNN-
A C G T A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
C G T A C G T A T C G A G A C T C A T G G C T A T A C G G C A T G T A C C T G A A G C T G A C T G C A T A C G T

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AHGAGTVACTTG
NNATGAGTCATNNN
A C G T A C G T C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AHGAGTVACTTG
TTGAGTGSTT--
C G T A G A T C C T A G C G T A A C T G A C G T T A G C G T C A G T A C A C G T A G C T A T C G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T