Information for 9-TGCTCTAKGACA (Motif 9)

C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A
Reverse Opposite:
A C G T T C A G A C G T A G T C G T A C A C G T C G T A T A C G C T G A A T C G G A T C C G T A
p-value:1e-3
log p-value:-8.297e+00
Information Content per bp:1.635
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif17.65%
Number of Background Sequences with motif351.3
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets92.7 +/- 52.1bp
Average Position of motif in Background103.7 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGCTCTAKGACA
GGCTCYAKCAYC
C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCTCTAKGACA----
NNGATCTAGAACCTNNN
A C G T C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCTCTAKGACA---
NGNTCTAGAACCNGV
C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCTCTAKGACA
DGWTTTATGRCN
C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCTCTAKGACA
NGCTN-------
C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCTAKGACA
NNGGCTCAAGGNN-
A C G T A C G T C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCTCTAKGACA---
ANNTTTTACGACNTNN
A C G T C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PBX2/MA1113.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCTAKGACA
NNTGATTTATGNN-
A C G T A C G T C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C A C G T

HOXC9/MA0485.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGCTCTAKGACA
-NTTTTACGAC-
C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A
A C G T C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T

Stat6/MA0520.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCTAKGACA-
ANTTCTCAGGAANNN
A C G T A C G T C G A T C A T G A T G C A G C T A T G C C G A T T C G A C A T G C T A G T G C A A G T C T G C A A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G