| p-value: | 1e-11 |
| log p-value: | -2.627e+01 |
| Information Content per bp: | 1.947 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 0.14% |
| Number of Background Sequences with motif | 2.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 77.7 +/- 54.7bp |
| Average Position of motif in Background | 123.6 +/- 41.5bp |
| Strand Bias (log2 ratio + to - strand density) | 3.2 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXC13/MA0907.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.79 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCGTAGAAA GCTCGTAAAAA |
|
|
|
PH0048.1_Hoxa13/Jaspar
| Match Rank: | 2 |
| Score: | 0.77 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTCGTAGAAA-- AAACCTCGTAAAATTT |
|
|
|
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 3 |
| Score: | 0.74 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTCGTAGAAA-- AAAGCTCGTAAAATTT |
|
|
|
HOXD12/MA0873.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCGTAGAAA AGTCGTAAAAA |
|
|
|
HOXC12/MA0906.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCGTAGAAA GGTCGTAAAAA |
|
|
|
HOXD11/MA0908.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTCGTAGAAA GTCGTAAAAA |
|
|
|
HOXD10/MA1506.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCGTAGAAA GGTCGTAAAAC |
|
|
|
HOXC11/MA0651.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCGTAGAAA GGTCGTAAAAT |
|
|
|
HOXC9/MA0485.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTCGTAGAAA GTCGTAAAAT |
|
|
|
Hoxa11/MA0911.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCGTAGAAA- GGTCGTAAAATT |
|
|
|