Information for 10-CAGCCGGATT (Motif 28)

A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A G T C A C T G A C T G A G T C A C G T A C T G
p-value:1e-3
log p-value:-7.696e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background134.8 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0077.1_Spdef_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CAGCCGGATT---
GTACATCCGGATTTTT
A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CAGCCGGATT--
-ACCCGGATGTA
A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAGCCGGATT---
TTGCCCGGATTAGG
A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGCCGGATT
CACAGCAGGGG-
A C G T A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CAGCCGGATT--
----CGGATTAN
A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGCCGGATT-
-ANCAGGATGT
A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGCCGGATT------
TGAACCGGATTAATGAA
A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGCCGGATT------
TGAACCGGATTAATGAA
A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0126.1_Obox6/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGCCGGATT----
AAAAACGGATTATTG
A C G T A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGCCGGATT
AAACCGGTTT
A G T C C G T A A C T G A G T C A G T C A C T G A C T G C G T A A C G T A C G T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T