Information for 7-WRAAYATGATMC (Motif 7)

C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A G T C C G T A A C G T T C A G A C G T A C G T G A C T C G A T
p-value:1e-6
log p-value:-1.457e+01
Information Content per bp:1.860
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif73.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets80.0 +/- 56.6bp
Average Position of motif in Background99.5 +/- 80.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:WRAAYATGATMC
GWAAYHTGABMC
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0105.1_Arid3a_2/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:WRAAYATGATMC----
-NNATNTGATANNNNN
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PH0161.1_Six1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:WRAAYATGATMC------
-ANNNATGATACCCCATC
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:WRAAYATGATMC------
-ANANNTGATACCCNATN
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:WRAAYATGATMC------
-AATNTTGATACCCTATN
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WRAAYATGATMC--
TGWAAYCTGABACCB
A C G T C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:WRAAYATGATMC------
-ANANGTGATACCCCATT
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:WRAAYATGATMC------
-ANANNTGATACCCTATN
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

SIX2/MA1119.1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----WRAAYATGATMC
AACTGAAACCTGATAC
A C G T A C G T A C G T A C G T C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

SIX1/MA1118.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:WRAAYATGATMC
GTAACCTGATA-
C G T A C T A G C G T A C G T A A G C T C G T A A C G T A C T G C G T A A C G T G T C A A G T C
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T