Information for 3-GAAAAGAAGT (Motif 11)

A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T
Reverse Opposite:
T C G A G T A C C G A T A C G T A T G C G A C T C A G T G C A T G A C T T G A C
p-value:1e-9
log p-value:-2.161e+01
Information Content per bp:1.590
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif5.30%
Number of Background Sequences with motif692.6
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets86.8 +/- 55.7bp
Average Position of motif in Background101.7 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXN3/MA1489.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAAAGAAGT
GTAAACAA--
A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T
A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAAAGAAGT--
AAACAGAAGCAG
A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T A C G T A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

ETV4/MA0764.2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAAAAGAAGT-
-ACAGGAAGTG
A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T A C G T
A C G T T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G

PB0023.1_Gata6_1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GAAAAGAAGT-
TATAGAGATAAGAATTG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------GAAAAGAAGT----
TTTTTAGAGATAAGAAATAAAG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGAAGT
TGGAACAGMA--
A C G T A C G T A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAAAAGAAGT
----NGAAGC
A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGAAGT
CGGAAGTGAAAC
A C G T A C G T A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GAAAAGAAGT
TACTGGAAAAAAAA-
A C G T A C G T A C G T A C G T A C G T A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAAAGAAGT-
-AGAGGAAGTG
A C T G C T G A C G T A G T C A C T G A T A C G T G C A G C T A C A T G A G C T A C G T
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G