Information for 3-GCTGGAYATAAG (Motif 3)

A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
Reverse Opposite:
A T G C G A C T A C G T C T G A C A G T C T G A A C G T A G T C A G T C C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.205e+01
Information Content per bp:1.698
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif54.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets106.7 +/- 45.7bp
Average Position of motif in Background100.6 +/- 100.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGAYATAAG
NGCTN--------
A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTGGAYATAAG
NNCAGCTGNN------
A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGAYATAAG
NAHCAGCTGD-------
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCTGGAYATAAG
NAACAGCTGG-------
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGGAYATAAG
CAGCAGCTGN-------
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTGGAYATAAG
GCTGTG------
A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

MYOG/MA0500.2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGGAYATAAG
NNGCAGCTGCNN-----
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCTGGAYATAAG
AACAGCTG--------
A C G T A C G T A C G T A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGAYATAAG
CAGCTGNT------
A C G T A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCTGGAYATAAG
TGCTGACTCA---
A C G T A C T G A G T C C G A T A C T G T A C G G T C A A G C T G T C A A G C T T G C A C G T A A T C G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T