Information for 19-GGTCATGACC (Motif 34)

A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.905e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.5 +/- 0.5bp
Average Position of motif in Background110.0 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:1
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--GGTCATGACC--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
T C A G T C G A C A T G A C T G A C G T A G T C T C G A G A C T T C A G T G C A G T A C G A T C G A C T A G T C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:2
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATGACC--
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:3
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATGACC--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C

RARG(var.3)/MA1553.1/Jaspar

Match Rank:4
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATGACC--
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:GGTCATGACC-
-----TGACCT
A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR2C1/MA1535.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCATGACC
CGAGGTCAC----
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGTCATGACC----
GGGCGATGACCAYTC
A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTCATGACC
GAGGTCAT----
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTCATGACC
AGRGGTCA-----
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------GGTCATGACC
NRBCARRGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G C G T A A G T C A G T C
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T