Information for 4-CTGACCCGTC (Motif 27)

A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C T G A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-4
log p-value:-9.398e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets153.0 +/- 0.0bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCCGTC---
NNNNTGACCCGGCGCG
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGACCCGTC
-TGACCT---
A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCCGTC---
NNCNTGACCCCGCTCT
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGACCCGTC
-TGACCYCT-
A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C
A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CTGACCCGTC---
NNNNTTGACCCCTNNNN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

NR2C1/MA1535.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGACCCGTC
NTGACCTCN-
A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C
C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGACCCGTC---
-TGACCYYTGVYN
A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGACCCGTC
NTGACCTN--
A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C
C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTGACCCGTC---
TGTCGTGACCCCTTAAT
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGACCCGTC---
NNANTTGACCCCTNNNN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G