Information for 25-GGGGGTTCBG (Motif 42)

A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G
Reverse Opposite:
A G T C T A C G A C T G C T G A C G T A G T A C A T G C A G T C A G T C A G T C
p-value:1e-2
log p-value:-6.604e+00
Information Content per bp:1.809
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif634.5
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets122.4 +/- 53.1bp
Average Position of motif in Background104.7 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GGGGGTTCBG---
GCTGGGGGGTACCCCTT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGGGGTTCBG
GGGGATTTCC-
A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGGGTTCBG
GGGGATTTCC-
A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGGGTTCBG
GGGAATTTCC-
A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGGTTCBG-
NTNTGGGGGGTCNNNA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGGGTTCBG
NGGGGATTTCCC
A C G T A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MZF1/MA0056.2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGGGGTTCBG
NNNTGGGGATTNN-
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGTTCBG-
NNNATTGGGGGTNTCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGGGTTCBG--
GGGGATTCCCCC
A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

KLF6/MA1517.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGTTCBG
TGGGCGTGGCN
A C G T A C T G A C T G A C T G A T C G A C T G A C G T A G C T A G T C A C G T C T A G
C A G T C A T G A T C G A C T G A G T C C T A G A C G T A C T G A C T G A G T C T A G C