Information for 20-TATAAGGACACC (Motif 30)

A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
Reverse Opposite:
C T A G A C T G A C G T A C T G A C G T A G T C A G T C C A G T A C G T C G T A A G C T C T G A
p-value:1e-4
log p-value:-9.479e+00
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets65.0 +/- 43.2bp
Average Position of motif in Background103.4 +/- 56.4bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:TATAAGGACACC
---AAGGTCAC-
A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TATAAGGACACC
--TRAGGTCA--
A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TATAAGGACACC
--CAAGGHCANV
A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TATAAGGACACC-----
ATAAATGACACCTATCA
A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

SRF/MA0083.3/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TATAAGGACACC
TGACCATATATGGTCA--
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TATAAGGACACC--
TCTCAAAGGTCACCTG
A C G T A C G T A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0198.1_Zfp128_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TATAAGGACACC
NNTATANATATACN
A C G T A C G T A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TATAAGGACACC-
GAGAACCGAAACTG
A C G T A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TATAAGGACACC
NBYCAAGGTCAC-
A C G T A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TATAAGGACACC
GTCAAGGTCAC-
A G C T C T G A A C G T C G T A G T C A A C T G A C T G C G T A A G T C C G T A A G T C A G T C
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T