Information for 5-TGTACTCTCG (Motif 19)

A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G C G T A A C T G A C G T C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.271e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.0 +/- 0.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGTACTCTCG-----
NNAATTCTCGNTNAN
A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TGTACTCTCG-----
ACCACTCTCGGTCAC
A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGTACTCTCG-----
AGTATTCTCGGTTGC
A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

NR1I3/MA1534.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTACTCTCG
ATGAACTTT--
A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGTACTCTCG--
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

VDR/MA0693.2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTACTCTCG
TGAACTCA--
A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGTACTCTCG
GTACACTCAC-
A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TGTACTCTCG-
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

ZBTB32/MA1580.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGTACTCTCG
ATACTGTACA----
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G
G C T A G A C T C T G A T G A C G C A T A T C G A C G T G C T A G A T C C G T A A C G T A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGTACTCTCG
TTGAMCTTTG-
A C G T A C G T A C T G A C G T C G T A A G T C A C G T A G T C A C G T A G T C A C T G
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T