| p-value: | 1e-4 |
| log p-value: | -1.099e+01 |
| Information Content per bp: | 1.683 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 1063.9 |
| Percentage of Background Sequences with motif | 1.39% |
| Average Position of motif in Targets | 114.2 +/- 55.6bp |
| Average Position of motif in Background | 97.5 +/- 68.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CABGAHTAGHAA- CTCATGAATATTCAT |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CABGAHTAGHAA --GGATTAGC-- |
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|
OTX2/MA0712.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CABGAHTAGHAA AAGGGATTAGAA- |
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|
|
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CABGAHTAGHAA NHRTCACGACDN---- |
|
|
|
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CABGAHTAGHAA -RGGATTAR--- |
|
|
|
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CABGAHTAGHAA VRGGATTARN-- |
|
|
|
GATA1/MA0035.4/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CABGAHTAGHAA NNAGATTAGAN- |
|
|
|
PITX1/MA0682.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CABGAHTAGHAA -NGGATTAN--- |
|
|
|
PB0185.1_Tcf1_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CABGAHTAGHAA TTGCCCGGATTAGG-- |
|
|
|
OTX1/MA0711.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CABGAHTAGHAA -CGGATTAN--- |
|
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