Information for 25-GCGCTCCACACA (Motif 35)

A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C
p-value:1e-1
log p-value:-4.094e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.0 +/- 60.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCGCTCCACACA
---ATCCAC---
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCGCTCCACACA--
--GCTCCGCCCMCY
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCGCTCCACACA
--GCTCCG----
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCGCTCCACACA-----
-AGCGGCACACACGCAA
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

KLF4/MA0039.4/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGCTCCACACA-
-CGCCCCACCCCC
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGCTCCACACA----
--TAACCACTCAAGAA
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

ZBTB26/MA1579.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCGCTCCACACA----
-TACTCCAGAAAAGAT
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCGCTCCACACA
----TCTAGACA
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCGCTCCACACA---
NRGCCCCRCCCHBNN
A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGCTCCACACA
NSCACTYVAV---
A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C C G T A A G T C C G T A A G T C C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T