Information for 10-CGGCAGCCAGAG (Motif 18)

A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C T G A C T G A G T C A C G T A C T G A G T C A G T C A C T G
p-value:1e-3
log p-value:-9.017e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF460/MA1596.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGCCAGAG--
CTCGGGAGGCTGAGGC
A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A G T C A G C T A G T C T C A G T A C G T A C G G T C A T A C G T C A G G A T C A C G T T A C G T C G A T A C G T A C G A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGCAGCCAGAG-
---ATGCCAGACN
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGGCAGCCAGAG
--BCAGACWA--
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

ZFP57/MA1583.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGGCAGCCAGAG
NNTGCGGCAANNN---
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGGCAGCCAGAG
---CAGCC----
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGGCAGCCAGAG-
---GAGSCCGAGC
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGGCAGCCAGAG
--CCAGACAG--
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CGGCAGCCAGAG------
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CGGCAGCCAGAG-----
---GGGCCTGAGGCGGG
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

TFAP2A/MA0003.4/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGGCAGCCAGAG-----
---NNGCCTGAGGCANN
A G T C A C T G A C T G A G T C C G T A A C T G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T