Information for 5-GGATGGCCTA (Motif 14)

C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A
Reverse Opposite:
C A G T C T G A C T A G C T A G T A G C A G T C C G T A A C G T A T G C A G T C
p-value:1e-9
log p-value:-2.079e+01
Information Content per bp:1.835
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif226.3
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets109.2 +/- 46.0bp
Average Position of motif in Background102.8 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GGATGGCCTA--
NGTAGGTTGGCATNNN
A C G T A C G T A C G T A C G T C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGATGGCCTA
YSTGGGTGGTCT-
A C G T A C G T A C G T C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGATGGCCTA-
---AGGCCTAG
C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGATGGCCTA----
NNHYTGACCTAGWTT
A C G T C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGATGGCCTA---
---TGACCTARTT
C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GGATGGCCTA---
---TGACCTARTT
C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORC/MA1151.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGATGGCCTA-----
---TGACCTANTTAN
C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORB/MA1150.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGATGGCCTA---
--NTGACCTAATT
C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T A C G T A C G T
A C G T A C G T C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T

ZNF449/MA1656.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGATGGCCTA--
NNGGTTGGGCTTNN
A C G T A C G T C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A A C G T A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGATGGCCTA
GGTTGGCAT-
C T A G T A C G T G C A A C G T A C T G A T C G A G T C A G T C A G C T G T C A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T