Information for 11-GCCCTGTATC (Motif 29)

A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A G T C C G T A A C T G A C T G A C T G A G T C
p-value:1e-3
log p-value:-6.925e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif46.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background88.4 +/- 185.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCCCTGTATC---
--AATGTATCAAT
A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCCTGTATC--
-GTCTGTTTCTA
A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T
A C G T C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

DMRTA2/MA1478.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCCTGTATC----
--AATGTAACAATT
A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGTATC
TGCCCAGNHW-
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCCTGTATC
--GCTGTG--
A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCCCTGTATC----
--AATGTATCAATT
A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCCCTGTATC---
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCCTGTATC-
GGCCATAAATCA
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

PB0105.1_Arid3a_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCCCTGTATC------
-ACCCGTATCAAATTT
A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGTATC----
TGACCTTTGCCCTAN
A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C