Information for 5-CACTAATTCATT (Motif 6)

A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.3 +/- 15.4bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF24/MA1124.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CACTAATTCATT-
CATTCATTCATTC
A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C

PH0147.1_Pou3f2/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CACTAATTCATT---
NNNACTAATTAATTANC
A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C

PH0135.1_Phox2a/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CACTAATTCATT---
NNACTAATTAATNNNN
A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CACTAATTCATT-
---TAATTGATTA
A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PH0038.1_Hlx/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CACTAATTCATT---
CCATAATTAATTACA
A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CACTAATTCATT----
AATCAATTCAATAATT
A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PH0008.1_Barx2/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CACTAATTCATT-
NANAANTAATTANTTA
A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T
G A C T C T G A G A C T G T C A T C G A A G T C G A C T G T C A G C T A C A G T C A G T C T G A T G A C A G C T C G A T C G T A

PH0028.1_En1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CACTAATTCATT---
GNATTAATTAGTTNNC
A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0120.1_Nkx6-3/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CACTAATTCATT---
CNNANTAATTAATTNNC
A C G T A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T G A C T C G A T G C A T C G A A C T G G A C T T G C A C G T A G A C T G A C T C T G A G C T A C G A T C G A T C G A T A C G T G A T C

PH0132.1_Pax6/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CACTAATTCATT---
TGATTAATTAATTGAC
A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C