Information for 3-AGGCAATCGC (Motif 5)

C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G C G T A A C G T A C G T A C T G A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGCAATCGC
AGATGCAATCCC
A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCAATCGC
AGCCAATCGG
C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAATCGC
NACAGGAAAT---
A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGCAATCGC
AAGGCAAGTGT
A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGCAATCGC
ACTAGCCAATCA-
A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGGCAATCGC
AAATGATGCAATCAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGCAATCGC
TTATGCAAT---
A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGCAATCGC-
AGCCAATCAGA
C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGCAATCGC-
AACCAATCAGA
C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PH0009.1_Bsx/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGGCAATCGC---
NTNAGNTAATTACCTN
A C G T A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C T G A G T C A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G