Information for 6-TTGATGGGAAGC (Motif 9)

A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A G T C A G T C A G T C C G T A A C G T A G T C C G T A C G T A
p-value:1e-4
log p-value:-9.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background155.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TTGATGGGAAGC
--CCTGGGAAAG
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PH0134.1_Pbx1/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------TTGATGGGAAGC
NNNNNATTGATGNGTGN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T

STAT3/MA0144.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTGATGGGAAGC
CTTCTGGGAAA-
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:TTGATGGGAAGC
------NGAAGC
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGATGGGAAGC----
TATTATGGGATGGATAA
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGATGGGAAGC
TTTNATTGCY---
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C A C G T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGATGGGAAGC
TTTGGCGGGAAA-
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGATGGGAAGC
--CSTGGGAAAD
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
A C G T A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGATGGGAAGC--
TTTCCAGGAAATGG
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGATGGGAAGC
-GGAGGGGGAA-
A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C T G C G T A C G T A A C T G A G T C
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T