Information for 11-CGCTATCAAT (Motif 30)

A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A C G T C G T A A C T G A G T C A C T G
p-value:1e-3
log p-value:-7.667e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background65.6 +/- 113.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGCTATCAAT
HNRAATCAAT
A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CGCTATCAAT-
---RRTCAATA
A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CGCTATCAAT---
---TATCGATNAN
A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGCTATCAAT---
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGCTATCAAT
-GCTGTCAA-
A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCTATCAAT------
GAAGATCAATCACTAA
A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGCTATCAAT---
-GCTATAAATAGC
A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGCTATCAAT---
-NCYATMAATCAY
A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGCTATCAAT--
AACTAGCTGTCAATAC
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CGCTATCAAT---
AATAGGGTATCAATATT
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T