Information for 2-CATCATVBAC (Motif 11)

A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
Reverse Opposite:
A T C G C G A T T C A G A G C T C T G A C G A T T C A G C T G A A C G T A C T G
p-value:1e-3
log p-value:-8.319e+00
Information Content per bp:1.715
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1425.2
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets117.4 +/- 42.5bp
Average Position of motif in Background99.8 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CATCATVBAC
ATTGCATCAT----
A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CATCATVBAC
ATTGCATCAK----
A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

ATF4/MA0833.2/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CATCATVBAC
NNATTGCATCATNN--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T A C G T A C G T

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CATCATVBAC
ATGACATCATCNN-
A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T A C G T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------CATCATVBAC
NNGATTGCATCATNN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
C T G A C G A T C A T G T C G A G C A T C A G T C A T G G A T C C T G A G A C T G T A C G C T A A G C T G C A T G C A T A C G T A C G T

CREB1/MA0018.4/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CATCATVBAC
NATGACATCANNN--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATCATVBAC--
TATCATAATTAAGGA
A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

POL002.1_INR/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATCATVBAC
TCAGTCTT---
A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CATCATVBAC--
TCACCCATCAATAAACA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CATCATVBAC
GYCATCMATCAT----
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G C T A G T C C G T A A G C T T C G A A G T C C G T A A T G C
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T A C G T