Information for 17-AAACTTAATGAG (Motif 20)

C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.118e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAACTTAATGAG-----
GACGATAATGAGCTTGC
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAACTTAATGAG-----
AAACATAATGAGGTTGC
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:AAACTTAATGAG--
----NTAATGAGCT
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:4
Score:0.74
Offset:4
Orientation:forward strand
Alignment:AAACTTAATGAG--
----ATAATGAGGT
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AAACTTAATGAG
---TTTAATGAN
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

NKX6-1/MA0674.1/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:AAACTTAATGAG
----TTAATTAN
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

HOXC4/MA1504.1/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AAACTTAATGAG
----NTAATGAN
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AAACTTAATGAG
----TTAATTAN
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

POU4F2/MA0683.1/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AAACTTAATGAG
ATGCATAATTAATGAG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

HOXD4/MA1507.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AAACTTAATGAG
----NTAATGAN
C G T A C G T A C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T