Information for 18-CCGGCAAGGC (Motif 35)

A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C T G A C T G
p-value:1e-3
log p-value:-7.324e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background94.2 +/- 82.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFP57/MA1583.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCAAGGC
NNTGCGGCAANNN
A C G T A C G T A C G T A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGGCAAGGC-
AAGGCAAGTGT
A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

NR5A1/MA1540.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGGCAAGGC---
--GTCAAGGTCAC
A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCGGCAAGGC----
----CAAGGHCANV
A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCGGCAAGGC--
--NTCAAGGTCA
A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCGGCAAGGC--
--BTCAAGGTCA
A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGGCAAGGC-
TGCCCTGAGGGCA
A C G T A C G T A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCAAGGC
TGCSGCANTN-
A C G T A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C
A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCGGCAAGGC--
----CTAGGCCT
A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCAAGGC
RCCGGAARYN-
A C G T A G T C A G T C A C T G A C T G A G T C C G T A C G T A A C T G A C T G A G T C
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T