Information for 22-TGGCCAKTAC (Motif 43)

C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
Reverse Opposite:
C T A G A C G T C T G A T G A C G A C T A C T G T A C G A T G C A G T C C G T A
p-value:1e-2
log p-value:-4.974e+00
Information Content per bp:1.753
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif46.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets90.9 +/- 50.8bp
Average Position of motif in Background100.2 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGGCCAKTAC
TYTGACCASWRG
A C G T A C G T C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGCCAKTAC-
-GGCCATTAAC
C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C A C G T
A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

HOXD8/MA0910.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TGGCCAKTAC
--GCAATTAC
C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
A C G T A C G T T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

NFYB/MA0502.2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGGCCAKTAC
CTCATTGGCCAG---
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G A C G T A C G T A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGGCCAKTAC
--GCAATTAC
C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
A C G T A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCCAKTAC-
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HOXA7/MA1498.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGGCCAKTAC
--GCAATTAC
C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
A C G T A C G T A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCAKTAC
NTTGGCANN---
A C G T A C G T C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCAKTAC
TGATTGGCTANN--
A C G T A C G T A C G T A C G T C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCCAKTAC--
TGGAATGTACCA
C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C A C G T A C G T
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A