Information for 11-ATCACCTACCTA (Motif 14)

C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G C G T A A C G T
p-value:1e-8
log p-value:-1.902e+01
Information Content per bp:1.945
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.7 +/- 62.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ATCACCTACCTA--
TTGACCTANTTATN
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORC/MA1151.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATCACCTACCTA-
-TGACCTANTTAN
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A A C G T
A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATCACCTACCTA
-TGACCTARTT-
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATCACCTACCTA
-TGACCTARTT-
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCACCTACCTA----
ACATGCTACCTAATAC
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCACCTACCTA
-NNACTTACCTN
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

ZKSCAN5/MA1652.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATCACCTACCTA
NNCTCACCTCCTNN
A C G T A C G T C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

RORB/MA1150.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCACCTACCTA
NTGACCTAATT-
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATCACCTACCTA----
ACTTGCTACCTACACC
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCACCTACCTA
BTGACCTAVTTW
C G T A A C G T T A G C C G T A A G T C A G T C A C G T G T C A A G T C G T A C C G A T C G T A
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T