Information for 4-CGCCTCTGTA (Motif 27)

A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A A C T G C G T A A C T G A C T G A G T C A C T G
p-value:1e-3
log p-value:-8.940e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTCTGTA-
NNGCTTCTGTNN
A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCTCTGTA-
VCCTCTCTGDDY
A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

HAND2/MA1638.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCCTCTGTA
NNCATCTGNN
A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCCTCTGTA
AGGVNCCTTTGT-
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGCCTCTGTA--
-NNCTTTGTTNN
A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCTCTGTA
NNGGCCACGCCTTTN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTCTGTA-
NNAACATCTGTNN
A C G T A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T
C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTCTGTA--
NNCGCCTCAGGCNN
A C G T A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CGCCTCTGTA---
CNNNGCTACTGTANNN
A C G T A C G T A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCCTCTGTA------
AGGACGCTGTAAAGGGA
A C G T A G T C A C T G A G T C A G T C A C G T A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A