Information for 1-RGWGGMCCMCTC (Motif 1)

C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T C T A G A C T G A C T G A G T C A G T C C G A T A G T C A G C T
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.860
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif23.81%
Number of Background Sequences with motif44.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets104.0 +/- 21.9bp
Average Position of motif in Background88.5 +/- 62.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:RGWGGMCCMCTC----
NNAGTCCCACTCNNNN
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

MAZ/MA1522.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:RGWGGMCCMCTC---
----CGCCCCTCCCC
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T C G A T G C T A G C T A G C T A G C C A G T T G A C T A G C A G T C A G T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RGWGGMCCMCTC---
---GGACCACCCACG
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PLAGL2/MA1548.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RGWGGMCCMCTC
-TGGGCCCCCT-
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C
A C G T A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:RGWGGMCCMCTC--
----AASCACTCAA
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:RGWGGMCCMCTC
--AAGACCCYYN
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RGWGGMCCMCTC-----
---TAACCACTCAAGAA
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGWGGMCCMCTC
TGGGGCCCAC--
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RGWGGMCCMCTC---
---AGACCACCCASR
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

CTCFL/MA1102.2/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RGWGGMCCMCTC--
--GCGCCCCCTGNN
C T G A A C T G C G T A C T A G A C T G G T A C A G T C A G T C G T C A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T