Information for 3-TAAGCGGG (Motif 38)

A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C T G A G T C A C G T A C G T C G T A
p-value:1e-2
log p-value:-5.567e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif29.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background101.3 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TAAGCGGG--
TATGCGGGTA
A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

BARHL1/MA0877.2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TAAGCGGG
CTAAACGG-
A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAAGCGGG
TTAAGTGGT
A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TAAGCGGG-----
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGCGGG----
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

CENPB/MA0637.1/Jaspar

Match Rank:6
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TAAGCGGG
TTCGTNNNANGCGGG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TAAGCGGG---
CATGCGGGTAC
A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAAGCGGG----
--GGCGGGAARN
A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

Nkx3-2/MA0122.3/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAAGCGGG---
NTTAAGTGGTTNN
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGCGGG----
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G