Information for 1-TYMYAYARGKAR (Motif 1)

A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A
Reverse Opposite:
A G C T A C G T T G A C A G T C A G C T A C G T C T A G A C G T C T G A A C G T C T G A C G T A
p-value:1e-6
log p-value:-1.501e+01
Information Content per bp:1.776
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif1561.9
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets135.8 +/- 24.9bp
Average Position of motif in Background101.7 +/- 87.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TYMYAYARGKAR
--NNATAAGGNN
A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A
A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TYMYAYARGKAR
VTTRCATAAY---
A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TYMYAYARGKAR---
ANTATTACATGTANNNN
A C G T A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T A C G T A C G T
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TYMYAYARGKAR---
ANTNNTACATGTANNTN
A C G T A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TYMYAYARGKAR---
ANTTNTACATGTANTTN
A C G T A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TYMYAYARGKAR----
AATATACATGTAATATA
A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TYMYAYARGKAR----
TAAATACATGTAAAATT
A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TYMYAYARGKAR---
NNTTTTACATGTANNNT
A C G T A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TYMYAYARGKAR-
---AACAGGAAGT
A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

SCRT1/MA0743.2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TYMYAYARGKAR--
AATTCAACAGGTGGTT
A C G T A C G T A C G T A G C T G T C A A G C T C G T A A G T C C G T A C T G A C T A G A C G T C G T A C T G A A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T