Information for 17-AATGGATACAAA (Motif 30)

C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T
p-value:1e-3
log p-value:-7.783e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background33.5 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRTC2/MA1479.1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATGGATACAAA
AATTGATACATT
C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATGGATACAAA---
AAAATGTAAACAAACAG
A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AATGGATACAAA
-NTTGATACATT
C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AATGGATACAAA
AATTGTTACATT
C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATGGATACAAA---
TAAATGTAAACAAAGGT
A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATGGATACAAA--
ATTTGCATACAATGG
A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Dmrt1/MA1603.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AATGGATACAAA-----
----GATACAAAGTATC
C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATGGATACAAA
AATGGAAAAT--
C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AATGGATACAAA---
AAAAAGTAAACAAAGAC
A C G T A C G T C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATGGATACAAA----
AAAGTAAACAAAAATT
C G T A C G T A A C G T A C T G A C T G C G T A A C G T C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T