Information for 24-CATCCCTCACTG (Motif 35)

A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C T G C G T A A C T G A C T G A C T G C G T A A C G T A C T G
p-value:1e-1
log p-value:-4.066e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.8 +/- 59.2bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf281/MA1630.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CATCCCTCACTG
CCTCCCCCACC-
A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
A G T C G T A C C A G T T G A C T A G C A T G C A T G C A T G C T C G A A T G C G A T C A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CATCCCTCACTG
YCATCMATCA---
A C G T A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATCCCTCACTG-
GTCATGCHTGRCTGS
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CATCCCTCACTG---
---VCCTCTCTGDDY
A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CATCCCTCACTG
GYCATCMATCAT--
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T

Wt1/MA1627.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATCCCTCACTG
CCCCTCCCCCACAC
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
G A T C A G T C G T A C T A G C C A G T A T G C A G T C A G T C G T A C A T G C C T G A A T G C T G C A A G T C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATCCCTCACTG
CCCCTCCCCCAC--
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATCCCTCACTG
MCTCCCMCRCAB
A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATCCCTCACTG-------
---CAATCACTGGCAGAAT
A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CATCCCTCACTG
GTCATCAATCATT-
A C G T A C G T A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G
C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T A C G T