Information for 16-TKAWCMTGRCCA (Motif 23)

A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G C G A T A C G T G T A C C G T A
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.875
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets82.2 +/- 59.1bp
Average Position of motif in Background106.6 +/- 42.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.88
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TKAWCMTGRCCA----
----TYTGACCASWRG
A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TKAWCMTGRCCA
NAGGTCACNNTGACC-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TKAWCMTGRCCA
TGACCTTGACCT
A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

NR6A1/MA1541.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TKAWCMTGRCCA----
NTGACCTTGAACTTGAN
A C G T A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TKAWCMTGRCCA
------TGACCT
A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TKAWCMTGRCCA--
TTGCCATGGCAACC
A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A A C G T A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

ESRRA/MA0592.3/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TKAWCMTGRCCA
NNTGACCTTGANN-
A C G T A C G T A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C A C G T

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TKAWCMTGRCCA-
-GAGCGTGACCCC
A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TKAWCMTGRCCA
TGACCTTGACCT
A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TKAWCMTGRCCA--
TTGCCATGGCAACN
A C G T A C T G C G T A C G T A A G T C G T C A A C G T A C T G C T A G A G T C A G T C C G T A A C G T A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C