Information for 1-GGACCGTTATTA (Motif 1)

C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T G T C A C G T A G T A C A C T G A C T G A C G T A G T C A G T C
p-value:1e-14
log p-value:-3.361e+01
Information Content per bp:1.947
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets127.2 +/- 40.5bp
Average Position of motif in Background27.0 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OVOL1/MA1544.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GGACCGTTATTA-
AAAACCGTTATTTG
A C G T C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T
C G T A C T G A C G T A G C T A A G T C A G T C C A T G A C G T A C G T G T C A A G C T A G C T G A C T A T C G

OVOL2/MA1545.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGACCGTTATTA-
GTACCGTTATGTG
C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

PB0045.1_Myb_1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGACCGTTATTA-
ATGGAAACCGTTATTTT
A C G T A C G T A C G T A C G T C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGACCGTTATTA-
TTGAAAACCGTTAATTT
A C G T A C G T A C G T A C G T C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGACCGTTATTA
-GGCVGTTR---
C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGACCGTTATTA------
--ACNNTAATTACNNCAN
C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

HOXA6/MA1497.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGACCGTTATTA--
----GGTAATTAAC
C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A T C G A G C T G T C A T C G A A C G T C G A T C G T A C T G A A T G C

EVX2/MA0888.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGACCGTTATTA--
----GGTAATTAGC
C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

HOXA2/MA0900.2/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGACCGTTATTA-
-----GTAATTAG
C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T T G C A C G T A A C G T A C G T C T G A T A C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGACCGTTATTA
BRRCVGTTDN--
C T A G A C T G C G T A A G T C A G T C A C T G A C G T A C G T C G T A A C G T A C G T C G T A
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T