Information for 2-AGCCATGTTCAA (Motif 2)

C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets16.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFP42/MA1651.1/Jaspar

Match Rank:1
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------AGCCATGTTCAA--
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGCCATGTTCAA
GCNGCCATCTTG--
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

NR6A1/MA1541.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGCCATGTTCAA------
-GTCAAGTTCAAGGTCAA
C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGCCATGTTCAA
GCCGCCATCTTG--
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCCATGTTCAA
--CAAAGKTCAA
C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A
A C G T A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

MTF1/MA0863.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCCATGTTCAA-
GTGCCGTGTGCAAA
A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

VDR/MA0693.2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGCCATGTTCAA
---TGAGTTCA-
C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A
A C G T A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T

MXI1/MA1108.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCCATGTTCAA
-NNCATGTGNN-
C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A
A C G T T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGCCATGTTCAA---
GGGCCGTGTGCAAAAA
A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCCATGTTCAA--
AATATACATGTAAAATT
A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T