Information for 11-CGGTGACATA (Motif 22)

A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A C G T A G T C C G T A A G T C A G T C A C T G
p-value:1e-8
log p-value:-1.857e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets145.2 +/- 50.0bp
Average Position of motif in Background92.8 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGGTGACATA---
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGTGACATA
--TTGACAG-
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGTGACATA
ARNTGACA--
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGGTGACATA
--ATGACGTA
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A
A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGTGACATA
--TTGACAGG
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGTGACATA--
--ATGACGTAAC
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T
A C G T A C G T T C G A A G C T A T C G G T C A A G T C C A T G G A C T T G C A C G T A G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGTGACATA-
-VBTGWCAGCB
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

CREB1/MA0018.4/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGTGACATA----
-NATGACATCANNN
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGTGACATA
-RHTGWCAR-
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGTGACATA
VGCTGGCA--
A G T C A C T G A C T G A C G T A C T G C G T A A G T C C G T A A C G T C G T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T