Information for 1-WMCAWCACAYAR (Motif 1)

G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T C T A G A C G T A C T G A C G T A C T G C G T A A C G T A C T G A C T G C G T A
p-value:1e-8
log p-value:-1.879e+01
Information Content per bp:1.839
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif124.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets123.8 +/- 46.9bp
Average Position of motif in Background117.3 +/- 77.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---WMCAWCACAYAR--
NNNTCCATCCCATAANN
A C G T A C G T A C G T G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:WMCAWCACAYAR----
CGAAGCACACAAAATA
G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---WMCAWCACAYAR--
AACACCAAAACAAAGGA
A C G T A C G T A C G T G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

ZNF410/MA0752.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:WMCAWCACAYAR-----
TCCATCCCATAATACTC
G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WMCAWCACAYAR----
AGCGGCACACACGCAA
G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:WMCAWCACAYAR
NWAACCACADNN
G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---WMCAWCACAYAR--
TCACCCATCAATAAACA
A C G T A C G T A C G T G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

NKX2-5/MA0063.2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:WMCAWCACAYAR--
---ACCACTCAAAA
G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

ZNF317/MA1593.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WMCAWCACAYAR
TAACAGCAGACT-
A C G T G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:WMCAWCACAYAR
-AAACCACAGC-
G C A T G T A C A G T C C G T A C G A T A G T C C G T A A G T C C G T A A G T C C G T A C T G A
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T