Information for 10-AAAACCCGTAAA (Motif 16)

C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.900e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0048.1_Hoxa13/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAACCCGTAAA----
AAACCTCGTAAAATTT
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Prdm15/MA1616.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAAACCCGTAAA
AGGAAAACCTGGAGC
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAACCCGTAAA-
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAAACCCGTAAA----
AAAGCTCGTAAAATTT
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

GRHL1/MA0647.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAACCCGTAAA
AAAACCGGTTTT
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAAACCCGTAAA--
---GCTCGTAAAAA
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAACCCGTAAA----
TAAAGTCGTAAAATAG
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAACCCGTAAA----
TAAAGTCGTAAAACAT
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AAAACCCGTAAA--
----CYHATAAAAN
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAAACCCGTAAA---
---NGYCATAAAWCH
C G T A C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A