Information for 3-ATGCAGAT (Motif 27)

C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T
Reverse Opposite:
C G T A A C G T A T G C A C G T A C T G A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.004e+01
Information Content per bp:1.951
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif60.00%
Number of Background Sequences with motif6316.5
Percentage of Background Sequences with motif1.65%
Average Position of motif in Targets87.8 +/- 32.9bp
Average Position of motif in Background103.6 +/- 157.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGAT---
ATATGCAAATNNN
A C G T A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU5F1/MA1115.1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGAT-
ATATGCAAATT
A C G T A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

POU2F3/MA0627.2/Jaspar

Match Rank:3
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---ATGCAGAT--
AATATGCAAATAA
A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAGAT
TTATGCAAAT
A C G T A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--ATGCAGAT
ATATGCAAAT
A C G T A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-ATGCAGAT-
TATGCAAATC
A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----ATGCAGAT----
TTGTATGCAAATTAGA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----ATGCAGAT----
TTGTATGCAAATTAGA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGAT---
WATGCAAATGAG
A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T A C G T A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-ATGCAGAT
TATGCAAAT
A C G T C G T A A C G T A C T G A G T C C G T A A T C G C G T A A C G T
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T