Information for 9-CCTGGGGCAG (Motif 17)

A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A G T C G T A C A G T C A G T C C G T A T A C G A C T G
p-value:1e-9
log p-value:-2.275e+01
Information Content per bp:1.930
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif99.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets99.7 +/- 39.9bp
Average Position of motif in Background97.5 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGGGCAG-
NNGCCTGAGGCANN
A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCTGGGGCAG-
GGGCCTGAGGCGGG
A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGGGCAG
TGCCTGAGGCN-
A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2E/MA1569.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCTGGGGCAG
NGCCTGAGGCN-
A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGGGCAG
TGCCCTNGGGCA-
A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCTGGGGCAG
TGCCCCAGGGCA-
A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T

Znf281/MA1630.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTGGGGCAG-
GGTGGGGGAGG
A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCTGGGGCAG-
ATTGCCTGAGGCAAT
A C G T A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGGGCAG
TGCCCNGGGGCA-
A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCTGGGGCAG
ATGCCCTGAGGC--
A C G T A C G T A C G T A C G T A G T C A T G C A C G T A C T G A C T G A C T G A C T G A G T C C G T A A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T