Information for 19-CCTTAATTTTAG (Motif 27)

A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A C G T A A C G T A C G T C G T A C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.952e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background41.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.4/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTTAATTTTAG--
NNTCTATTTTTAGNN
A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PRRX1/MA0716.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCTTAATTTTAG
--NTAATTAN--
A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G
A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTTAATTTTAG-
-KCTATTTTTRGH
A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Dlx1/MA0879.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTTAATTTTAG
-NNTAATTANN-
A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G
A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCTTAATTTTAG-
-GCTATTTTTAGC
A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTTAATTTTAG-
-TCTATTTATAGN
A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G A C G T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

SHOX/MA0630.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTTAATTTTAG
--TTAATTGG--
A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G
A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTTAATTTTAG
-NNTAATTAGA-
A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G
A C G T A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAATTTTAG
NNTNNCAATATTAG
A C G T A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAATTTTAG
NNTNNCAATATTAG
A C G T A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T C G T A A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G