Information for 7-AGCTATGGAGAC (Motif 7)

C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C
Reverse Opposite:
A T C G A C G T G A T C C G A T T A G C G T A C C T G A C G A T C G T A C T A G G T A C A G C T
p-value:1e-13
log p-value:-3.101e+01
Information Content per bp:1.767
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif39.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets88.4 +/- 56.0bp
Average Position of motif in Background105.8 +/- 55.2bp
Strand Bias (log2 ratio + to - strand density)-1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCTATGGAGAC-
-NCNGTGTAGACG
C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A C G T A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

RFX4/MA0799.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCTATGGAGAC-
CGTTGCCATGGCAACG
A C G T A C G T A C G T C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A T G C C T A G G C A T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A T C G A G A T C T A C G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTATGGAGAC-
TTGCCATGGCAACN
A C G T C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCTATGGAGAC-
-GCTAARTAAACA
C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A C G T A T C G G A T C G C A T T C G A G C T A T C G A G C A T G T C A C G T A G T C A G A T C G C T A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCTATGGAGAC-----
CTACTTGGATACGGAAT
C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

NFATC4/MA1525.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGCTATGGAGAC-
---AATGGAAAAT
C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A C G T A C G T A C G T T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

POU5F1/MA1115.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCTATGGAGAC-
--ATATGCAAATT
C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCTATGGAGAC-
TTGCCATGGCAACC
A C G T C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGCTATGGAGAC
---TATGCAAAT
C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGCTATGGAGAC-
---AATGGAAAAT
C T G A A C T G G A T C C G A T C G T A A G C T A C T G A T C G C G T A C A T G C G T A A T G C A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T