| p-value: | 1e-3 |
| log p-value: | -9.045e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 157.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------TTGATGGTGCTT- ACTYKNATTCGTGNTACTTC |
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PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TTGATGGTGCTT---- -AGATGCTRCTRCCHT |
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PB0135.1_Hoxa3_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTGATGGTGCTT CCTTAATNGNTTTT |
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Dux/MA0611.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTGATGGTGCTT TTGATTGN---- |
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|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.56 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------TTGATGGTGCTT NNNNNATTGATGNGTGN- |
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|
|
PB0144.1_Lef1_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -7 |
| Orientation: | reverse strand |
| Alignment: | -------TTGATGGTGCTT NNANTGATTGATNTTN--- |
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|
|
Arid3a/MA0151.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.54 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTGATGGTGCTT TTTAAT------- |
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|
|
MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.54 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTGATGGTGCTT NNTGATTGATGNN---- |
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|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTGATGGTGCTT GTTAATGGCC--- |
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|
|
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTGATGGTGCTT TTTNATTGCY--- |
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