Information for 2-CCACAAGGTT (Motif 5)

A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
Reverse Opposite:
C G T A G T C A A G T C G T A C G C A T G C A T T A C G G A C T C T A G T A C G
p-value:1e-12
log p-value:-2.837e+01
Information Content per bp:1.540
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif226.3
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets116.3 +/- 57.9bp
Average Position of motif in Background104.8 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGGTT
NWAACCACADNN--
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGGTT
AAACCACAGAN--
A C G T A C G T A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

MXI1/MA1108.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCACAAGGTT
GACACATGGC-
A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGGTT
NAAACCACAG----
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGGTT
AAACCGCAA----
A C G T A C G T A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCACAAGGTT
AAAACCTCAAAT--
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCACAAGGTT
AAACCACANN---
A C G T A C G T A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCACAAGGTT
AAACCACAGC---
A C G T A C G T A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCACAAGGTT--
TTCCCAAGGGACT
A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

EBF3/MA1637.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCACAAGGTT--
TTCCCAAGGGAAT
A C G T A T G C G A T C C T G A A T G C C G T A C G T A C A T G T C A G C A G T G C A T A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T