Information for 3-CCGTGACTTT (Motif 8)

A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C G T A G T C C G T A A G T C A C T G A C T G
p-value:1e-3
log p-value:-9.049e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCGTGACTTT
NCGTGACN--
A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCGTGACTTT-
--TTGACTTTT
A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CCGTGACTTT
--GTGACCTT
A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

NR2F2/MA1111.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGTGACTTT--
-NNTGACCTTTN
A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCGTGACTTT--
--NTGACCTTGA
A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGACTTT-----
NNNGTGACCTTTGNNN
A C G T A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

NR4A1/MA1112.2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGTGACTTT---
-NNTGACCTTTNN
A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGTGACTTT
NHGTCGTGAYDN-
A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGTGACTTT----
--GTGACCTTGRVN
A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

GFI1/MA0038.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGACTTT
TGCAGTGATTTN
A C G T A C G T A G T C A G T C A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G