Information for 11-TCTTTTGATTAC (Motif 13)

A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A C G T A A C T G C G T A
p-value:1e-4
log p-value:-9.622e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TCTTTTGATTAC--
--NTTTCATTRCHD
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T
A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

HOXA10/MA0899.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TCTTTTGATTAC-
--NTTTTATTACN
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C

FOXN3/MA1489.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TCTTTTGATTAC
----TTGTTTAC
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TCTTTTGATTAC-
---TTTCATTRCC
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T
A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTTGATTAC---
TNAATTTTATTACCTN
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCTTTTGATTAC---
NNNNTTTGTTTACNNT
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

HOXD9/MA0913.2/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCTTTTGATTAC
--NTTTTATTGC
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C
A C G T A C G T C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C

Foxj3/MA0851.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCTTTTGATTAC-----
NNNTTTGTTTACNTTNN
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCTTTTGATTAC-----
NNNTTTGTTTACNTTNN
A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PHOX2B/MA0681.2/Jaspar

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCTTTTGATTAC-
NNATAATTTGATTANN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A G T C A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A