Homer de novo Motif Results (motif_results/SRR15726020//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1220
Total background sequences = 47821
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A A C T G A C G T A C T G C G T A C T A G A G T C A G T C A G T C A C T G 1e-19-4.591e+010.74%0.00%41.1bp (31.8bp)PB0057.1_Rxra_1/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T A C G T A G T C C G T A T G A C A G T C A G T C C G T A A G T C A C T G A G T C A G T C 1e-19-4.591e+010.74%0.00%41.1bp (30.6bp)Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer(0.765)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C 1e-17-4.004e+010.66%0.00%41.3bp (21.7bp)MEIS1/MA0498.2/Jaspar(0.685)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G A G T C C G T A T G C A C G T A C G T A A C G T C T A G C T A G A G C T A G T C A G T C 1e-16-3.810e+010.82%0.01%47.8bp (55.7bp)PB0137.1_Irf3_2/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
5 A C G T A C T G A G T C A C G T C G A T A C G T A C T G A G T C A G T C A C G T A C T G A C G T 1e-15-3.589e+010.82%0.01%34.8bp (62.9bp)PB0166.1_Sox12_2/Jaspar(0.638)
More Information | Similar Motifs Found
motif file (matrix)
6 A C T G C G T A C T A G C A T G G A T C C G A T T C G A T A G C C G T A A G C T 1e-14-3.374e+012.95%0.56%45.9bp (58.5bp)RUNX3/MA0684.2/Jaspar(0.567)
More Information | Similar Motifs Found
motif file (matrix)
7 A G T C A C T G C G T A A C T G A C T G A C T G C G T A A C G T A G T C C G T A 1e-12-2.865e+010.49%0.00%27.9bp (0.0bp)RHOXF1/MA0719.1/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
8 A G T C C G T A A C T G A C G T A G T C A C G T A C T G A C G T A C T G C G T A A G T C A G T C 1e-12-2.865e+010.49%0.00%16.5bp (7.2bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G C G A T A C T G C G T A C G T A A C G T C G T A A C T G C G T A A C T G A C G T A G C T 1e-10-2.514e+010.82%0.03%42.8bp (49.4bp)PB0203.1_Zfp691_2/Jaspar(0.539)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A C T G A C T G A G T C A G T A C G A T C A G T C C G A T G T C A C G T A C G T A C G T A 1e-10-2.456e+010.74%0.02%54.5bp (41.0bp)PH0064.1_Hoxb9/Jaspar(0.630)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A G T C A C G T A 1e-10-2.451e+010.49%0.00%43.9bp (11.8bp)DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer(0.686)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A C T G A G T C A C G T C G T A C G T A A C T G C G T A A G T C A C T G 1e-10-2.318e+010.41%0.00%30.4bp (1.8bp)GATA6/MA1104.2/Jaspar(0.667)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G 1e-10-2.318e+010.41%0.00%14.1bp (13.1bp)NR1H4/MA1110.1/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C T G G A T C T A C G G T C A A G T C C G T A A T C G A C G T C T A G C G T A 1e-8-2.044e+011.89%0.39%49.8bp (62.4bp)PB0195.1_Zbtb3_2/Jaspar(0.772)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C T G A C T G 1e-8-1.974e+010.41%0.01%14.1bp (35.5bp)PB0044.1_Mtf1_1/Jaspar(0.702)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A C G T G A T C A G C T G A C T A G C T G C A T C G T A A G C T G T A C 1e-8-1.920e+018.70%4.78%58.4bp (56.1bp)TATA-Box(TBP)/Promoter/Homer(0.682)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A C T G C G T A C G T A A C T G A C G T C G T A G T A C A C G T A G T C C G T A A C G T 1e-7-1.790e+010.33%0.00%37.9bp (20.2bp)PH0117.1_Nkx3-1/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A 1e-7-1.790e+010.33%0.00%24.0bp (61.6bp)PB0208.1_Zscan4_2/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A C T G A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T 1e-7-1.773e+010.41%0.01%14.1bp (41.4bp)ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer(0.703)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C A C G T C G T A A T G C C G T A A C G T A T C G A G T C 1e-7-1.725e+013.86%1.56%55.9bp (58.5bp)PH0084.1_Irx3_2/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
21 * A G T C A C T G C G T A C G T A C G T A C G T A A T G C A T C G 1e-6-1.553e+010.98%0.14%55.3bp (51.3bp)PB0034.1_Irf4_1/Jaspar(0.691)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A 1e-6-1.553e+013.28%1.30%59.8bp (54.5bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.695)
More Information | Similar Motifs Found
motif file (matrix)
23 * A G T C A G T C C G T A A C T G C G T A A C G T A C T G A C T G A C G T C G T A A C G T A C T G 1e-6-1.514e+010.33%0.01%52.5bp (48.9bp)PB0193.1_Tcfe2a_2/Jaspar(0.762)
More Information | Similar Motifs Found
motif file (matrix)
24 * G C A T C T A G A C G T T C A G C G A T T A C G C A T G T A C G A C G T T C A G C G A T C A T G 1e-6-1.428e+0112.72%8.55%52.5bp (68.3bp)KLF9/MA1107.2/Jaspar(0.760)
More Information | Similar Motifs Found
motif file (matrix)
25 * G T C A C A T G G T C A C G T A T G A C C T A G A T C G G T C A 1e-5-1.324e+017.05%4.13%54.2bp (57.2bp)PB0137.1_Irf3_2/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A G T C C G T A 1e-5-1.283e+010.25%0.00%39.9bp (0.0bp)MSANTD3/MA1523.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G T C A C G T A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T 1e-5-1.283e+010.25%0.00%47.2bp (0.0bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.662)
More Information | Similar Motifs Found
motif file (matrix)
28 * A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A 1e-5-1.279e+013.69%1.72%53.5bp (56.0bp)ZNF263/MA0528.2/Jaspar(0.845)
More Information | Similar Motifs Found
motif file (matrix)
29 * C A T G C A T G C A G T A G C T A C G T A C G T G A C T A C G T A C G T A G C T G A C T C A G T 1e-5-1.195e+018.61%5.52%50.3bp (52.3bp)ZNF384/MA1125.1/Jaspar(0.880)
More Information | Similar Motifs Found
motif file (matrix)
30 * G C A T T A G C G C A T T A G C G C A T A T G C C G A T G T C A A G C T A T G C 1e-5-1.170e+013.69%1.80%52.2bp (64.8bp)PB0140.1_Irf6_2/Jaspar(0.605)
More Information | Similar Motifs Found
motif file (matrix)
31 * A C T G A C G T C G T A A C T G A C G T A G T C A G T C A C G T C G T A A G T C 1e-5-1.154e+010.33%0.01%45.3bp (34.7bp)PB0114.1_Egr1_2/Jaspar(0.604)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G C T A T C G A C G T C G T A A C G T A G T C C G T A A C T G 1e-4-1.106e+013.77%1.90%55.0bp (59.8bp)DMRT3/MA0610.1/Jaspar(0.820)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G A C T G A C G T C T G A A C T G A C G T A C T G A C T G A G T C C G T A 1e-4-1.056e+010.66%0.09%68.9bp (52.9bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.653)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C G T C G A T A C G T A G T C A C G T C G T A A C T G C G T A 1e-4-9.483e+005.33%3.22%58.5bp (57.4bp)PB0090.1_Zbtb12_1/Jaspar(0.759)
More Information | Similar Motifs Found
motif file (matrix)
35 * A G T C C G T A A T G C A C G T A C T G G T C A A C G T C G T A A C T G A C G T A C T G C G T A 1e-3-8.731e+000.25%0.01%58.6bp (44.1bp)PB0195.1_Zbtb3_2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
36 * A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C G T C T G A A G T C C G T A A C T G 1e-3-8.057e+000.16%0.00%59.5bp (0.0bp)ZBTB32/MA1580.1/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
37 * C G T A A G T C C G T A A G T C A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C T G 1e-3-8.057e+000.16%0.00%46.8bp (0.0bp)KLF4/MA0039.4/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
38 * A C T G A T C G A G C T C A G T A C T G A C T G A G T C A C T G 1e-3-8.025e+002.13%1.00%55.4bp (55.6bp)SP9/MA1564.1/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
39 * A C G T A G T C A G T C A C T G G T C A A T G C C G T A A T C G 1e-3-7.896e+002.21%1.06%54.9bp (58.7bp)PB0138.1_Irf4_2/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
40 * C G T A A G T C C G T A A G T C A C G T A C T G A C G T A C G T A C T G A C G T C T A G C G T A 1e-3-7.552e+000.25%0.01%45.4bp (36.7bp)PB0120.1_Foxj1_2/Jaspar(0.662)
More Information | Similar Motifs Found
motif file (matrix)
41 * C G T A A G T C C G T A A C G T A C T G C G T A A G T C A C T G 1e-3-7.356e+000.49%0.08%35.0bp (55.8bp)Atf1/MA0604.1/Jaspar(0.766)
More Information | Similar Motifs Found
motif file (matrix)
42 * A T G C A G T C A G T C A G T C C G T A A C T G A C T G A C T G A C G T A G T C A G T C A C G T 1e-2-6.688e+000.16%0.00%63.4bp (44.2bp)EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer(0.702)
More Information | Similar Motifs Found
motif file (matrix)
43 * C G A T C T A G A T C G A T G C G T A C C G T A A C T G G A C T G T C A A G T C 1e-2-4.974e+000.41%0.10%50.8bp (63.0bp)Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer(0.670)
More Information | Similar Motifs Found
motif file (matrix)