Information for 20-GAGGTGTAGCTT (Motif 22)

A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A A G T C A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.589e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.0 +/- 0.0bp
Average Position of motif in Background58.1 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGTAGCTT-
GCGGAGGTGTCGCCTC
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

TBX3/MA1566.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGGTGTAGCTT
GAGGTGTGAA--
A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGGTGTAGCTT
-AGGTGTGA---
A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T A C G T

TBX6/MA1567.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGGTGTAGCTT
GAGGTGTGAA--
A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGTAGCTT
RGCAGGTGYA----
A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T A C G T A C G T A C G T

KLF10/MA1511.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGGTGTAGCTT
GGGGGTGTGGC--
A C G T A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
C T A G C A T G C T A G A C T G A T C G G A C T C A T G A G C T C A T G C A T G A G T C A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGTGTAGCTT
-AGGTGTGA---
A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGTAGCTT
AACAGGTGCA----
A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGGTGTAGCTT
-AGGTGTCA---
A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

Rbpjl/MA1621.1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GAGGTGTAGCTT
NNNACAGGTGTNNN--
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G A C G T A C G T