Information for 11-CCAATAGTAG (Motif 21)

A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.288e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background72.4 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CCAATAGTAG---
---ATAGTAGGTG
A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCAATAGTAG
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCAATAGTAG
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCAATAGTAG
ATCCATTAGCA-
A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCAATAGTAG----
GCACAYAGTAGGKCY
A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAATAGTAG
CCAAAAATAG
A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAATAGTAG-
KCCAAAAATAGC
A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

OSR1/MA1542.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCAATAGTAG--
--NACAGTAGCN
A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C G T A C G T G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAATAGTAG--
ATGCTAAAAATAGAA
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCAATAGTAG
AGCCAATCGG--
A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A A C T G A C G T C G T A A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T