Information for 16-TGTCTATGYG (Motif 25)

C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
Reverse Opposite:
T A G C C T A G T G A C T C G A C G A T C G T A A C T G G T C A A T G C C G T A
p-value:1e-7
log p-value:-1.734e+01
Information Content per bp:1.698
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif439.9
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets116.6 +/- 49.7bp
Average Position of motif in Background101.8 +/- 67.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXG1/MA0613.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTATGYG
TTGTTTAC---
A C G T C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T

Foxf1/MA1606.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTATGYG
NNTGTTTACAN-
A C G T A C G T C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTATGYG
TTGTTTAC---
A C G T C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGTCTATGYG
TGTTTAC---
C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGTCTATGYG
TWGTCTGV---
A C G T C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTCTATGYG
TGTTTAC---
C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGTCTATGYG
ATGMATATDC-
A C G T C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGTCTATGYG--
CGTCTACACGGG
C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTATGYG-
NTGTTTAYATWW
A C G T C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

FOXK2/MA1103.2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTATGYG
NNTGTTTACNN-
A C G T A C G T C G A T A T C G A C G T G T A C C G A T C G T A A G C T A C T G G A T C A T C G
A G T C G C A T C G A T C T A G G A C T C A G T C G A T G C T A G A T C G C T A G C A T A C G T