Information for 16-GCATACAAAAAG (Motif 18)

A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A G T C
p-value:1e-4
log p-value:-9.805e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCATACAAAAAG
ATTTGCATACAATGG-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCATACAAAAAG
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0093.1_Zfp105_1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCATACAAAAAG--
AACAAACAACAAGAG
A C G T A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCATACAAAAAG----
AAACAGACAAAGGAAT
A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCATACAAAAAG-
AAAGTAAACAAAAATT
A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

SOX15/MA1152.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCATACAAAAAG
-AAAACAATAG-
A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G
A C G T C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCATACAAAAAG
ATATGCAAATT-
A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCATACAAAAAG
BMRVACAAWGGV
A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCATACAAAAAG-----
--GTATAAAAGGCGGGG
A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCATACAAAAAG-----
--GTATAAAAGGCGGGG
A C T G A G T C C G T A A C G T C G T A A G T C C G T A C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G