Information for 7-CAACACTAAGAC (Motif 8)

T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
Reverse Opposite:
A C T G A G C T G T A C C G A T A C G T G C T A T A C G C A G T C T A G G A C T A G C T A C T G
p-value:1e-5
log p-value:-1.300e+01
Information Content per bp:1.577
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif4170.8
Percentage of Background Sequences with motif8.81%
Average Position of motif in Targets101.6 +/- 45.6bp
Average Position of motif in Background99.7 +/- 67.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0141.1_Isgf3g_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAACACTAAGAC
GCAAAACATTACTA-
A C G T A C G T A C G T T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAACACTAAGAC--
TGAACCCGATGACCC
A C G T T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

IKZF1/MA1508.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAACACTAAGAC
GAAACAGGAAGT-
A C G T T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAACACTAAGAC
-AAAACAAAGAA
T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Stat2/MA1623.1/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CAACACTAAGAC
AGAAACAGAAACT-
A C G T A C G T T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAACACTAAGAC
-AAAACAAAGG-
T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAACACTAAGAC
AAGCACTTAA--
T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAACACTAAGAC
NAACAAT-----
T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAACACTAAGAC
-AACCGANA---
T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CAACACTAAGAC
GGTTAAACATTAA---
A C G T A C G T A C G T A C G T T G A C C T G A C G T A G A T C G T C A A T G C C A G T C G T A C G T A C A T G C T G A T A G C
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T A C G T