| p-value: | 1e-12 |
| log p-value: | -2.803e+01 |
| Information Content per bp: | 1.629 |
| Number of Target Sequences with motif | 8.0 |
| Percentage of Target Sequences with motif | 0.86% |
| Number of Background Sequences with motif | 6.8 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 101.4 +/- 51.0bp |
| Average Position of motif in Background | 105.6 +/- 67.7bp |
| Strand Bias (log2 ratio + to - strand density) | 2.5 |
| Multiplicity (# of sites on avg that occur together) | 1.62 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0053.1_Hoxa6/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTGGTCAKTAC--- NTNAGGTAATTACCTT |
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PH0049.1_Hoxa2/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTGGTCAKTAC--- NTGAGCTAATTACCNT |
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PH0060.1_Hoxb5/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTGGTCAKTAC--- ATGNGCTAATTANCNT |
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PH0081.1_Pdx1/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTGGTCAKTAC--- NTGNGCTAATTACCNN |
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|
PH0103.1_Meox1/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTGGTCAKTAC--- CTGAGGTAATTACCNC |
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|
|
PH0079.1_Hoxd3/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGTGGTCAKTAC--- TTGAGTTAATTAACCT |
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|
|
HOXA4/MA1496.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TGTGGTCAKTAC ----GTCATTAG |
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|
|
HOXB4/MA1499.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TGTGGTCAKTAC ----ATCATTAG |
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|
|
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TGTGGTCAKTAC NNHTGTGGTTWN--- |
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PH0052.1_Hoxa5/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGTGGTCAKTAC--- NTGAGCTAATTACCNT |
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