Information for 2-GACAAAGTCG (Motif 7)

A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C A C G T A C G T A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.900e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background74.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GACAAAGTCG
AAAACAAAGAA-
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GACAAAGTCG---
TCCAAAGTCCAGA
A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GACAAAGTCG---
TCCAAAGTCCAAA
A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGTCG
VRRACAAWGG--
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACAAAGTCG-
GATACAAAGTATC
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACAAAGTCG
GAACAAAGGG-
A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGTCG
GGAACAAAGR--
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GACAAAGTCG
AAAACAAAGG--
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GACAAAGTCG
BMRVACAAWGGV-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GACAAAGTCG-
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T