Information for 1-ATATGTGCGA (Motif 5)

C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T
p-value:1e-3
log p-value:-9.054e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATATGTGCGA
ACCATATGTT---
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATATGTGCGA
CCATATGT----
A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATATGTGCGA--
NNNNTTGTGTGCTTNN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATATGTGCGA
RTACGTGC--
C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATATGTGCGA--
--AGGTGTGAAM
C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATATGTGCGA----
-AAGGTGTGAAAAT
C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATATGTGCGA
--AGGTGTGA
C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATATGTGCGA-
-AAGGTGTKAA
C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

Atoh1/MA0461.2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATATGTGCGA
ANCATATGTT---
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATATGTGCGA--
--AGGTGTGAAA
C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A