Information for 4-CAAGTTGCCG (Motif 8)

A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G C T A G A G T C C G T A C G T A A G T C A C G T A C G T A C T G
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets127.8 +/- 58.7bp
Average Position of motif in Background138.6 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CAAGTTGCCG--
CAAGATGGCGGC
A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

ZFP57/MA1583.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAGTTGCCG----
-GCATTGCCGCAGT
A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAAGTTGCCG--
CAAGATGGCGGC
A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTTGCCG
NTCAAGTGGN--
A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

SIX1/MA1118.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAAGTTGCCG
TATCAGGTTAC--
A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTTGCCG-----
GNNATTTGTCGTAANN
A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGTTGCCG-
AANTTCAAGTGGCTTN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAGTTGCCG----
GCGGAGGTGTCGCCTC
A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

RFX7/MA1554.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAAGTTGCCG-
--CGTTGCTAT
A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G A C G T
A C G T A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTTGCCG
NTCAAGTGG---
A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T