Information for 11-CACTGCGAGT (Motif 33)

A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C A C T G A G T C C G T A A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.853e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets15.0 +/- 0.0bp
Average Position of motif in Background160.6 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CACTGCGAGT--
CAATCACTGGCAGAAT
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CACTGCGAGT-
NNGCNCTGCGCGGC
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACTGCGAGT--
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCGAGT---
NNNACCGAGAGTNNN
A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCGAGT----
NNNNATGCGGGTNNNN
A C G T A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

MSANTD3/MA1523.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CACTGCGAGT----
----GTGAGTGNAC
A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACTGCGAGT
DCTCAGCAGG-
A C G T A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CACTGCGAGT
---TGCGTG-
A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CACTGCGAGT--
CHCAGCRGGRGG
A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T A C G T
T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACTGCGAGT-
-TATGCGGGTA
A G T C C G T A A G T C A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C G T
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A