Information for 7-CCAABHTCABCC (Motif 10)

A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
Reverse Opposite:
A C T G C T A G T C A G A C G T A C T G C G T A C G A T T C A G A C G T A C G T C T A G A T C G
p-value:1e-6
log p-value:-1.545e+01
Information Content per bp:1.715
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1025.8
Percentage of Background Sequences with motif2.16%
Average Position of motif in Targets108.9 +/- 71.4bp
Average Position of motif in Background97.7 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.67
Offset:6
Orientation:forward strand
Alignment:CCAABHTCABCC--
------TCAGTCTT
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCAABHTCABCC
--AAGGTCAC--
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCAABHTCABCC
AAAACCTCAAAT
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

ESRRA/MA0592.3/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCAABHTCABCC
GCTCAAGGTCACA-
A C G T A C G T A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAABHTCABCC
TCAAGGTCAN--
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCAABHTCABCC--
TATTCAAGGTCATGCGA
A C G T A C G T A C G T A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

NR1I3/MA1534.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCAABHTCABCC
-AAAGTTCAT--
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCAABHTCABCC
CAAAGGTCAG--
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAABHTCABCC
TCAAGGTCAT--
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCAABHTCABCC
ATGACGTCATCN
A T G C A G T C G T C A C G T A A G T C G C T A C G A T A G T C C G T A A G T C A G T C G T A C
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C