Information for 1-GACATATGCG (Motif 1)

A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GACATATGCG
-ACATATGG-
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

NEUROG1/MA0623.2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GACATATGCG
GACATATGTC
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C

NEUROG2/MA0669.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GACATATGCG
GACATATGTT
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Atoh1/MA0461.2/Jaspar

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GACATATGCG
AACATATGTT
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GACATATGCG
NACATATGGN
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

ATOH7/MA1468.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GACATATGCG
GACATATGTT
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GACATATGCG
GCCATATGGT
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GACATATGCG
ACCATATGTT
A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACATATGCG-
AAACATATGTTT
A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACATATGCG-
NGCCATATGGTG
A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C T G A G T C A C T G A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G