Information for 4-CCCTGGGGCTAA (Motif 4)

A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
Reverse Opposite:
C G A T A C G T C T G A A T C G A G T C G T A C G T A C G T A C C G T A A C T G A C T G C T A G
p-value:1e-11
log p-value:-2.626e+01
Information Content per bp:1.761
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif91.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets92.2 +/- 58.4bp
Average Position of motif in Background97.6 +/- 49.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGCTAA
GTCCCCAGGGGA---
A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

EBF1/MA0154.4/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CCCTGGGGCTAA
NNTCCCCTGGGGANN-
A C G T A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T A C G T

EBF3/MA1637.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGCTAA
NNTCCCTTGGGAN--
A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T

Plagl1/MA1615.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CCCTGGGGCTAA-
CCCTGGGGCCAGG
A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A A C G T
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G

Ebf2/MA1604.1/Jaspar

Match Rank:5
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGCTAA
NNTCCCTTGGGAN--
A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGCTAA
ATTGCCTGAGGCGAA
A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGCTAA
ATGCCCTGAGGC---
A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCCTGGGGCTAA
SCCTSAGGSCAW
A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:9
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGGGGCTAA
NTGCCCTAGGGCAA-
A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCCTGGGGCTAA
ATTCCCTGAGGGGAA
A C G T A C G T A C G T A G T C G T A C A G T C G A C T A C T G A C T G A C T G A C T G T A G C G A C T T G C A G C T A
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A