Information for 5-TAGGCTCG (Motif 38)

A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A G T C A G T C A C G T C G T A
p-value:1e-2
log p-value:-5.074e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif114.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background107.2 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TAGGCTCG
--NGCTN-
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TAGGCTCG--
--GGCGCGCT
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAGGCTCG
TWGTCTGV
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ZBTB6/MA1581.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGGCTCG-----
NNGGCTCAAGGNN
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

POL001.1_MTE/Jaspar

Match Rank:5
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------TAGGCTCG---
NCGACCGCTCCGCTCGAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TAGGCTCG-----
---GCTCGGSCTC
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TAGGCTCG----
ATAAAGGCGCGCGAT
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGGCTCG-
---GCTCCG
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZNF449/MA1656.1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TAGGCTCG-
NNGGTTGGGCTTNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

HES2/MA0616.2/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGGCTCG----
--GGCACGTGCC
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C A T G T G A C C T G A A G T C A C T G A G C T T C A G A G T C A T G C