Information for 1-ATAATACA (Motif 3)

G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C G T A C G T G T C A A C G T
p-value:1e-6
log p-value:-1.582e+01
Information Content per bp:1.884
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif62.50%
Number of Background Sequences with motif3967.1
Percentage of Background Sequences with motif8.79%
Average Position of motif in Targets119.5 +/- 47.0bp
Average Position of motif in Background100.1 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ATAATACA-
NNNTTTNTAATACNG
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATAATACA--
GTCATAAATCATT
A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A A C G T A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

HOXD13/MA0909.2/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATAATACA
CCCAATAAAAC-
A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATAATACA
ATGCATAATTCA
A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

HOXA13/MA0650.2/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATAATACA
CCCAATAAAAC-
A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C A C G T

CDX4/MA1473.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATAATACA
GGCAATAAAAC-
A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A
C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C A C G T

CDX1/MA0878.2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATAATACA
GGCCATAAAAC-
A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ATAATACA---
NNCCATAAATCATNN
A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATAATACA--
NTTGATACATT
A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATAATACA---
AAAAATAACAAACGG
A C G T A C G T A C G T A C G T G T C A A C G T C G T A C G T A C G A T C G T A A G T C C G T A A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G