Information for 17-CTTGGGCAGACT (Motif 27)

A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A C G T A C T G A G T C A G T C A G T C C G T A C G T A A C T G
p-value:1e-6
log p-value:-1.457e+01
Information Content per bp:1.972
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 29.8bp
Average Position of motif in Background128.8 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTGGGCAGACT-
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTTGGGCAGACT-
-----BCAGACWA
A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CTTGGGCAGACT---
-----CCAGACRSVB
A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CTTGGGCAGACT-
-----CCAGACAG
A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTGGGCAGACT
NGTGGGCAT---
A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTGGGCAGACT
WDNCTGGGCA----
A C G T A C G T A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

EBF3/MA1637.1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGGCAGACT
NNTCCCTTGGGAN----
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T A C G T A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGGCAGACT
NNTCCCTTGGGAN----
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTGGGCAGACT
TNNGGGCAG---
A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTTGGGCAGACT
GTCCTTGAGCCCG--
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A C T G A G T C G T C A A C T G C G T A A G T C A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G A C G T A C G T