| p-value: | 1e-3 |
| log p-value: | -7.403e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 87.6 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 166.0 +/- 0.0bp |
| Average Position of motif in Background | 89.2 +/- 125.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NKX6-3/MA1530.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.80 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GCCATTAAAC CTCATTAAA- |
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|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
| Match Rank: | 2 |
| Score: | 0.80 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GCCATTAAAC NGCAATTAAA- |
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|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 3 |
| Score: | 0.78 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GCCATTAAAC GGCCATTAAC- |
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|
|
HOXD9/MA0913.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.78 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GCCATTAAAC GCAATAAAAC |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.78 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GCCATTAAAC GGCCATAAAAC |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GCCATTAAAC KGCCATAAAA- |
|
|
|
PH0056.1_Hoxa9/Jaspar
| Match Rank: | 7 |
| Score: | 0.76 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GCCATTAAAC---- ACGGCCATAAAATTAAT |
|
|
|
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 8 |
| Score: | 0.76 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GCCATTAAAC--- AGAGCCATAAAATTCG |
|
|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.75 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GCCATTAAAC VGCCATAAAA- |
|
|
|
Arid3a/MA0151.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.74 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GCCATTAAAC ---ATTAAA- |
|
|
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