Information for 8-AGGTCACGCT (Motif 21)

C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C T G A C G T A C T G C G T A A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.376e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background137.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCACGCT-
NNGGTCACGCTC
A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-AGGTCACGCT
AAGGTCAC---
A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACGCT
TRAGGTCA----
A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGGTCACGCT
AGGTCA----
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGGTCACGCT
CGAGGTCAC---
A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------AGGTCACGCT
TCTCAAAGGTCACCTG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR2F2/MA1111.1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGGTCACGCT
CAAAGGTCAAA--
A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCACGCT
TCAAGGTCAN---
A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGGTCACGCT-----
AGGTCACCCTGACCT
C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGGTCACGCT
ATCAAGGTCA----
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C T G A G T C A C G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T