Information for 6-CTCTGAACGTAT (Motif 9)

A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C T G
p-value:1e-4
log p-value:-9.805e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTCTGAACGTAT
---TGAACTCA-
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGAACGTAT
VCCTCTCTGDDY----
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCTGAACGTAT
---BGCACGTA-
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCTGAACGTAT---
ACTATGAATGAATGAT
A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

HIF1A/MA1106.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCTGAACGTAT
--NNGCACGTNC
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCTGAACGTAT
----GCACGTAY
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

BARHL1/MA0877.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTGAACGTAT
--CTAAACGG--
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCTGAACGTAT--
----GCACGTACCC
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

TCF7/MA0769.2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCTGAACGTAT
TCCTTTGATGT---
A C G T A C G T A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTCTGAACGTAT
--ATGAACTTT-
A G T C A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T