Information for 25-ATGGRTRGRTAG (Motif 34)

G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G
Reverse Opposite:
A G T C A G C T C G T A A G C T A G T C A G C T C G T A A G C T A G T C A G T C C G T A A C G T
p-value:1e-2
log p-value:-5.724e+00
Information Content per bp:1.884
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background92.9 +/- 117.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATGGRTRGRTAG--
GTATTGGGTGGGTAATT
A C G T A C G T A C G T G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G A C G T A C G T
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGGRTRGRTAG-
AGATGKDGAGATAAG
A C G T A C G T G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

KLF17/MA1514.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGRTRGRTAG--
AAGGGGTGCGTGGTG
A C G T G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G A C G T A C G T
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGGRTRGRTAG
TGATKGATGR----
A C G T A C G T G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGRTRGRTAG
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C G T G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ATGGRTRGRTAG
TTTGATTGATGN
G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ATGGRTRGRTAG
ATGATKGATGRC---
A C G T A C G T A C G T G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:ATGGRTRGRTAG
ATGGGGTGAT--
G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ATGGRTRGRTAG-----
-NNNTTAGGTAGCNTNT
G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ATGGRTRGRTAG
NTNATCGATA-----
A C G T A C G T A C G T G T C A A C G T C T A G A C T G C T G A A C G T C T G A A C T G C T G A A C G T C T G A A C T G
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A A C G T A C G T A C G T A C G T A C G T