Information for 17-TACTAAGGTC (Motif 30)

A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C
Reverse Opposite:
C T A G C T G A A T G C G A T C C G A T A G C T C T G A A T C G G A C T G T C A
p-value:1e-3
log p-value:-8.763e+00
Information Content per bp:1.807
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif162.8
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets92.0 +/- 47.7bp
Average Position of motif in Background98.2 +/- 51.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TACTAAGGTC-
---TRAGGTCA
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

NR2F2/MA1111.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TACTAAGGTC---
--CAAAGGTCAAA
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T A C G T A C G T
A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TACTAAGGTC--
--CAAAGGTCAG
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T A C G T
A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TACTAAGGTC--
--TCAAGGTCAN
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T A C G T
A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TACTAAGGTC-
GKBCARAGGTCA
A C G T A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A

NR2C1/MA1535.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TACTAAGGTC--
---CGAGGTCAC
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T A C G T
A C G T A C G T A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TACTAAGGTC-----
--CAAAGGTCAAGGG
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TACTAAGGTC-
-ATCAAGGTCA
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T
A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TACTAAGGTC--
----AAGGTCAC
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:10
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TACTAAGGTC--
----GAGGTCAT
A C G T C T G A A T G C G A C T T C G A C G T A C T A G A T C G G A C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T