Information for 22-AGGCAAGCTCCC (Motif 23)

C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C T G A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.125e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAGCTCCC
AAGGCAAGTGT--
A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:6
Orientation:forward strand
Alignment:AGGCAAGCTCCC
------GCTCCG
C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZNF682/MA1599.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGCAAGCTCCC--
CGGGCCAAGCCCCTAT
A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGCAAGCTCCC-
CTGGCAGNCTGCCA
A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCAAGCTCCC-
-GGGAAATCCCCN
C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGGCAAGCTCCC
---CAAGCTT--
C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGGCAAGCTCCC
--GGAAATTCCC
C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGGCAAGCTCCC
-GGAAATCCCC-
C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGGCAAGCTCCC---
TAAGCCACGCCCCCTTT
A C G T A C G T C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGCAAGCTCCC
--GGAAATTCCC
C G T A A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C G T A G T C A G T C A G T C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C