Information for 24-GGTCTATGCA (Motif 34)

A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C C G T A A C G T C G T A A C T G C G T A A G T C A G T C
p-value:1e-2
log p-value:-5.119e+00
Information Content per bp:1.965
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.1 +/- 50.9bp
Average Position of motif in Background80.5 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGTCTATGCA--
CGTCTACACGGG
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTCTATGCA-
-GHATATKCAT
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A A C G T
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGTCTATGCA----
----TATGCAAATC
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGTCTATGCA
CGTCTAGACA
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

SMAD5/MA1557.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGTCTATGCA
TGTCTAGACA
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTCTATGCA
RRTCAATA--
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGTCTATGCA-----
--AATATGCAAATAA
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGTCTATGCA---
----TATGCAAAT
A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

HNF4G/MA0484.2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGTCTATGCA
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGTCTATGCA
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A