| p-value: | 1e-4 |
| log p-value: | -1.113e+01 |
| Information Content per bp: | 1.723 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 1055.2 |
| Percentage of Background Sequences with motif | 0.91% |
| Average Position of motif in Targets | 123.0 +/- 28.9bp |
| Average Position of motif in Background | 100.8 +/- 84.6bp |
| Strand Bias (log2 ratio + to - strand density) | 1.6 |
| Multiplicity (# of sites on avg that occur together) | 1.33 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACAHTAABCAH RGCCATYAATCA- |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GACAHTAABCAH -TCATCAATCA- |
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PH0150.1_Pou4f3/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACAHTAABCAH--- AGTTATTAATGAGGTC |
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|
PH0073.1_Hoxc9/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GACAHTAABCAH GGAGGTCATTAATTAT |
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Lhx3/MA0135.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GACAHTAABCAH-- -AAATTAATTAATC |
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|
|
Sox17/MA0078.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GACAHTAABCAH GACAATGNN--- |
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|
|
MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GACAHTAABCAH- GTCATCAATCATT |
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|
|
PH0118.1_Nkx6-1_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACAHTAABCAH---- GAAAATTAATTACTTCG |
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|
|
PH0019.1_Dbx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACAHTAABCAH--- TTTAATTAATTAATTC |
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|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GACAHTAABCAH GYCATCMATCAT |
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