Information for 6-CCTGGGTGCT (Motif 7)

T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A T G C G T A C G T A C C G T A C T A G A C T G
p-value:1e-12
log p-value:-2.775e+01
Information Content per bp:1.852
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif6.18%
Number of Background Sequences with motif235.4
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets98.3 +/- 60.4bp
Average Position of motif in Background96.1 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CCTGGGTGCT--
CGTGGGTGGTCC
T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTGGGTGCT--
YSTGGGTGGTCT
T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T A C G T A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

GLI2/MA0734.2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGGTGCT--
CGNCGTGGGTGGTCN
A C G T A C G T A C G T T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T

GLI3/MA1491.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGGTGCT--
CGNCGTGGGTGGTCN
A C G T A C G T A C G T T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------CCTGGGTGCT---
GGCGCTGTCCATGGTGCTGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.60
Offset:-8
Orientation:forward strand
Alignment:--------CCTGGGTGCT--
GGAGCTGTCCATGGTGCTGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCTGGGTGCT
WDNCTGGGCA--
A C G T A C G T T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGGTGCT
GCACCCCTGGGTGCC
A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

EBF1/MA0154.4/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CCTGGGTGCT
NNTCCCCTGGGGANN
A C G T A C G T A C G T A C G T A C G T T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T
C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTGGGTGCT-
CTTGAGTGGCT
T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T