Information for 21-GACCTAATTTGC (Motif 22)

A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C T G A C G T A G T C
p-value:1e-4
log p-value:-1.112e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GACCTAATTTGC
BTGACCTAVTTW--
A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GACCTAATTTGC
TGACCTARTT---
A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GACCTAATTTGC
TGACCTARTT---
A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

RORC/MA1151.1/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GACCTAATTTGC
TGACCTANTTAN-
A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GACCTAATTTGC
TTGACCTANTTATN
A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORB/MA1150.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GACCTAATTTGC
NTGACCTAATT---
A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T A C G T A C G T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GACCTAATTTGC----
ACCCCTAATTAGCGGTG
A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GACCTAATTTGC
NNHYTGACCTAGWTT--
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T A C G T A C G T

PAX4/MA0068.2/Jaspar

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GACCTAATTTGC
---CTAATTAG-
A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GACCTAATTTGC---
ACNNCTAATTAGNNNN
A C G T A C T G C G T A A G T C A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T