Information for 23-ACCTGCTGCG (Motif 42)

C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C T G A C T G A C G T
p-value:1e-3
log p-value:-7.273e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background141.7 +/- 47.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-ACCTGCTGCG
NNCCTGCTGNG
A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCTGCG---
TCNCCTGCTGNGNNN
A C G T A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCTGCG---
TNTCCTGCTGTGNNG
A C G T A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCTGCG--
CCCCCTGCTGTGNN
A C G T A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCTGCG---
NNTCCTGCTGTGNNN
A C G T A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCTGCG
CCCCCTGCTGTG
A C G T A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----ACCTGCTGCG-
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ACCTGCTGCG-
-CCTGCTGAGH
C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:9
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--ACCTGCTGCG
CCYCCYGCTGDG
A C G T A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-ACCTGCTGCG
CACCTGTTGC-
A C G T C G T A A G T C A G T C A C G T A C T G A G T C A C G T A C T G A G T C A C T G
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C A C G T