Information for 15-GGGACGTTCC (Motif 23)

A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A C G T A A G T C A C T G A G C T A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.009e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets103.8 +/- 58.0bp
Average Position of motif in Background111.1 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)2.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGGACGTTCC
GGGGATTTCC
A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGGACGTTCC
GGGAATTTCC
A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGGACGTTCC
GGGGATTTCC
A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGACGTTCC
GGGAATTTCC
A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGACGTTCC-
NGGGGATTTCCC
A C G T A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

HES7/MA0822.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGACGTTCC-
TGGCACGTGCCA
A C G T A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGACGTTCC-
TGGCACGTGCCG
A C G T A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

PB0094.1_Zfp128_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGACGTTCC----
TCTTTGGCGTACCCTAA
A C G T A C G T A C G T A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

HIF1A/MA1106.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGGACGTTCC-
-GTACGTGCCC
A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C A C G T
A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGACGTTCC-
TGGTACATTCCA
A C G T A C T G A C T G A C T G T C G A A G T C A C T G A C G T A C G T A G T C A G T C A C G T
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A