Information for 12-GCCCTCTGCG (Motif 29)

A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G C G T A A C T G A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.735e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets156.0 +/- 0.0bp
Average Position of motif in Background114.1 +/- 43.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTGCG
GCGCCCCCTGNN
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTGCG-
NNNCCATCTGTNN
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTGCG--
NNCCATCTGTNNN
A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCCTCTGCG
GCCATCTGTT
A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCCCTCTGCG
CTGACCTTTG--
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GCCCTCTGCG---
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCCTCTGCG
NNCATCTGNN
A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCTGCG--
TGCCCTGAGGGCA
A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTGCG---
TGACCTTTGCCCTA
A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTCTGCG-
VCCTCTCTGDDY
A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C A C T G A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C