Information for 15-GGTCATAACT (Motif 33)

A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.901e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background140.3 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGTCATAACT---
GGAGGTCATTAATTAT
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTCATAACT
AGGTCA-----
A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATAACT--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T
T C A G C T G A C A T G C A T G A C G T A G T C C T G A A G C T T C A G T G C A T G A C G T A C A G C T A G T C

NR2C1/MA1535.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCATAACT
CGAGGTCAC----
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGTCATAACT--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

PH0012.1_Cdx1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCATAACT---
TAAGGTAATAAAATTA
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTCATAACT
GAGGTCAT----
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATAACT
NAGGTCATTGA-
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTCATAACT---
AAAGGTAATAAAATTT
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTCATAACT
AGRGGTCA-----
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T