Information for 4-AATGAGCACAAC (Motif 4)

C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATGAGCACAAC
ATAATGAGGT----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AATGAGCACAAC--
NNGTATGTGCACATNNN
A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AATGAGCACAAC--
NTNTATGTGCACATNNN
A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATGAGCACAAC---
NNNNTGAGCACTGTNNG
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATGAGCACAAC
NTAATGAGCT----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AATGAGCACAAC---
-CCAAGCCCAACCAG
C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

PH0081.1_Pdx1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATGAGCACAAC
AAGGTAATTAGCTCAT-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AATGAGCACAAC
GACGATAATGAGCTTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGCACAAC
AAATTAGCATAAT
A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGCACAAC
TAATTTGCATAA-
A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T