Information for 12-AGAGTATGWCCM (Motif 21)

C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G C G A T A G T C C G T A A C G T C T G A A G T C A C G T A G T C A C G T
p-value:1e-5
log p-value:-1.329e+01
Information Content per bp:1.919
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets67.0 +/- 15.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AGAGTATGWCCM
------TGACCT
C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PAX5/MA0014.3/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAGTATGWCCM-
-GAGCGTGACCCC
C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGTATGWCCM
ATAGTAGGTG--
C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGAGTATGWCCM--
-----NTGACCTCN
C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGAGTATGWCCM---
TTNGGGTACGCCNNANN
A C G T A C G T C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AGAGTATGWCCM------
------TGACCYYTGVYN
C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:AGAGTATGWCCM--
------TGACCYCT
C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAGTATGWCCM-
AAGGTCATGACCTT
A C G T C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAGTATGWCCM------
-NNNNTTGACCCCTNNNN
C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGAGTATGWCCM-
GVACAGNMTGTYCTB
A C G T A C G T C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G