Information for 18-CTCCAAGTCG (Motif 24)

A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.292e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB3L4/MA1474.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTCCAAGTCG--
TGCCACGTCACC
A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T
A G C T C A T G G T A C G T A C T C G A A G T C T C A G A G C T T A G C T C G A A G T C A T G C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CTCCAAGTCG
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCCAAGTCG-
-NTCAAGTGGN
A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCCAAGTCG-
ACTACAATTCCC
A C G T A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCCAAGTCG-----
ATGGAAAGTCGTAAAA
A C G T A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

HNF4G/MA0484.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCCAAGTCG---
TCCAAAGTCCAGA
A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCCAAGTCG---
TCCAAAGTCCAAA
A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

TCF7/MA0769.2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAAGTCG
ANATCAAAGNN-
A C G T A C G T A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T

MYCN/MA0104.4/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCCAAGTCG--
GGCCACGTGGCC
A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T
T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTCCAAGTCG
-NTCAAGTGG
A G T C A C G T A G T C A G T C C G T A C G T A A C T G A C G T A G T C A C T G
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G