| p-value: | 1e-3 |
| log p-value: | -7.602e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.67% |
| Number of Background Sequences with motif | 2.4 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 32.0 +/- 0.0bp |
| Average Position of motif in Background | 106.0 +/- 17.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0117.1_Nkx3-1/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTAAGTATTCAA--- TACTAAGTACTTAAATG |
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PH0112.1_Nkx2-3/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTAAGTATTCAA-- CNTTAAGTACTTAANG |
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PH0116.1_Nkx2-9/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTAAGTATTCAA--- TTTTAAGTACTTAAATT |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTAAGTATTCAA --GAATATTCAT |
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PH0039.1_Mnx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----CTAAGTATTCAA NNNCACTAATTANTNN- |
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|
|
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTAAGTATTCAA TTAAGTGCTT-- |
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|
|
PH0132.1_Pax6/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----CTAAGTATTCAA GNNAATTAATTAATCA- |
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|
|
POU4F2/MA0683.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CTAAGTATTCAA CTCATTAATTATGCAT |
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|
LIN54/MA0619.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | CTAAGTATTCAA-- -----NATTCAAAT |
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POU4F1/MA0790.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTAAGTATTCAA CATTAATTATTCAT |
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