Information for 16-ACTTGATTGACA (Motif 33)

C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T
p-value:1e-3
log p-value:-7.496e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background120.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:ACTTGATTGACA--
--BTGABTGACAGS
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:ACTTGATTGACA--
--NTGATTGACAGN
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PKNOX1/MA0782.2/Jaspar

Match Rank:3
Score:0.76
Offset:1
Orientation:forward strand
Alignment:ACTTGATTGACA----
-TTTGAGTGACAGCTA
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ACTTGATTGACA---
---TGAGTGACAGSC
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:ACTTGATTGACA
--TTGATTGN--
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ACTTGATTGACA-----
GGGTGAGTGACAGGCGG
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACTTGATTGACA-
-TTTGATTGATGN
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ACTTGATTGACA--
--RTGATTKATRGN
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.66
Offset:6
Orientation:forward strand
Alignment:ACTTGATTGACA--
------TTGACAGG
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ACTTGATTGACA-
------TTGACAG
C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G