Information for 7-GTGTAAGACTGA (Motif 9)

A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.914e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTGTAAGACTGA
AGGTGHCAGACA--
A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTGTAAGACTGA
AGGTGNCAGACAG-
A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTGTAAGACTGA
----NNNANTGA
A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTGTAAGACTGA---
BAGTCATANTGAAAG
A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGTAAGACTGA-----
WNAGTCADAVTGAAACTN
A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTGTAAGACTGA
AAGGTGTGAAA----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T

TBX6/MA1567.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GTGTAAGACTGA
GAGGTGTGAA-----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGTAAGACTGA
AGGTGTGA------
A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGTAAGACTGA
AGGTGTGA------
A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTGTAAGACTGA
AGGTGTGAAA----
A C G T A C G T A C T G A C G T A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C T G C G T A
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T A C G T A C G T A C G T