Information for 5-ATATCATTACTG (Motif 8)

C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T C G T A C G T A A C G T A C T G C G T A A C G T C G T A A C G T
p-value:1e-4
log p-value:-9.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATATCATTACTG
NNCTCATTAT--
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATATCATTACTG
--GTCATTAG--
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATATCATTACTG
AAGATATCCTT----
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T

BARX2/MA1471.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATATCATTACTG
AAAAACCATTAC--
A C G T A C G T C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C A C G T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATATCATTACTG
--ATCATTAG--
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATATCATTACTG
--GTCATTAA--
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
A C G T A C G T T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATATCATTACTG
-TTTCATTRCC-
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATATCATTACTG
--ATCATTAG--
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATATCATTACTG
-NTTAATTACN-
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATATCATTACTG
---YCATTAMC-
C G T A A C G T C G T A A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C T G
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T