Information for 11-TGCCTTCGCA (Motif 26)

A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G C G T A C G T A A C T G A C T G A G T C C G T A
p-value:1e-3
log p-value:-7.890e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets127.0 +/- 0.0bp
Average Position of motif in Background62.7 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCCTTCGCA--
-TACTTGGCAGA
A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

RBPJ/MA1116.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCCTTCGCA--
--NNTTCCCANN
A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCTTCGCA
GCGCCTGCGCA
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTTCGCA
NNACTTGCCTT----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCCTTCGCA--
--NNTTGGCANN
A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

EGR2/MA0472.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCCTTCGCA
ACGCCCACGCA
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

RFX1/MA0509.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCTTCGCA----
TNCCATAGCAACNN
A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

RFX3/MA0798.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCTTCGCA----
TNCCATAGCAACNN
A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

EGR3/MA0732.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCCTTCGCA--
CTACGCCCACGCACT
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCCTTCGCA
--GCTTCC--
A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A G T C C G T A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T