Information for 20-CTTGTACTGA (Motif 32)

A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A G C T C G T A G T A C C G T A C T G A A C T G
p-value:1e-4
log p-value:-1.052e+01
Information Content per bp:1.942
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif75.1
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets110.2 +/- 43.7bp
Average Position of motif in Background112.0 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTGTACTGA---
TTATGTACTAATAA
A C G T A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTTGTACTGA---
---ATAATGAGGT
A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTACTGA
TGACCTTGACCT--
A C G T A C G T A C G T A C G T A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CTTGTACTGA----
----TGCTGACTCA
A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTGTACTGA------
AAATTTGCTGACTTAGA
A C G T A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

NRL/MA0842.2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTTGTACTGA--
AAAAGTGCTGACG
A C G T A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T A C G T
C T G A C G T A C G T A G C T A C T A G G A C T C T A G T G A C A G C T C A T G C T G A A G T C C T A G

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTTGTACTGA--
--GGYAATGAAA
A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

POL002.1_INR/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTTGTACTGA
--NNNANTGA
A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PB0062.1_Sox12_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTTGTACTGA--
TAATTGTTCTAAAC
A C G T A C G T A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

NKX6-3/MA1530.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTTGTACTGA-
--TTTAATGAN
A G T C A G C T A C G T A C T G A C G T C T G A A G T C A C G T A C T G C G T A A C G T
A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G