Information for 7-CGTAAAAGAC (Motif 13)

A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C G T A C G T A C G T C G T A A G T C A C T G
p-value:1e-3
log p-value:-8.189e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC9/MA0485.2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGTAAAAGAC
GTCGTAAAAT--
A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CGTAAAAGAC
GGTCGTAAAAA--
A C G T A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CGTAAAAGAC
AGTCGTAAAAA--
A C G T A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGTAAAAGAC
GTCGTAAAAT--
A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
T C A G A G C T A G T C T C A G A C G T G C T A C G T A G T C A G C T A G A C T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CGTAAAAGAC
GGTCGTAAAAT--
A C G T A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T

HOXD10/MA1506.1/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CGTAAAAGAC
GGTCGTAAAAC--
A C G T A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CGTAAAAGAC
TTCAAAWTAAAAGTC
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGTAAAAGAC
GCTCGTAAAAA--
A C G T A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGTAAAAGAC
GGTCGTAAAATT-
A C G T A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGTAAAAGAC
GTCGTAAAAA--
A C G T A C G T A G T C A C T G A C G T C G T A C G T A C G T A C G T A A C T G C G T A A G T C
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T