Information for 15-AGCAGGTGTGCA (Motif 22)

C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
Reverse Opposite:
A C G T A C T G T G A C C G T A A T G C G C T A A G T C A G T C A G C T A C T G G A T C A G C T
p-value:1e-9
log p-value:-2.189e+01
Information Content per bp:1.776
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif8.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets134.5 +/- 39.8bp
Average Position of motif in Background69.5 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)2.4
Multiplicity (# of sites on avg that occur together)2.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGGTGTGCA
NNACAGGTGTNN-
A C G T C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AGCAGGTGTGCA
GNMCAGGTGTGC-
A C G T C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C A C G T

Rbpjl/MA1621.1/Jaspar

Match Rank:3
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--AGCAGGTGTGCA
NNNACAGGTGTNNN
A C G T A C G T C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:4
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AGCAGGTGTGCA
RGCAGGTGYA--
C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:5
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGCAGGTGTGCA
GGCAGGTGCA--
C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGCAGGTGTGCA
NNCAGGTGNN--
C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AGCAGGTGTGCA
AACAGGTGNT--
C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGGTGTGCA
SDGCAGGTGCNS-
A C G T C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:9
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGGTGTGCA
NNGCAGGTGNN--
A C G T C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGCAGGTGTGCA
AACAGGTGCA--
C T G A C T A G A G T C C T G A A C T G C T A G C G A T A T C G A C G T A C T G T A G C T C G A
C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T A C G T