Information for 12-AAGTCTCTGTCC (Motif 18)

C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAGTCTCTGTCC
VCCTCTCTGDDY
C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

IRF6/MA1509.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGTCTCTGTCC
-AGTTTCGGT--
C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C
A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGTCTCTGTCC-
NNAATTCTCGNTNAN
A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AAGTCTCTGTCC-
---YCTTTGTTCC
C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTCTCTGTCC--
AAGGTCACTGACCTT
A C G T C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C C T G A A T G C A G C T T C A G T G C A G T A C G T A C A G C T G A C T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTCTCTGTCC--
AAGGTCATTGACCTT
A C G T C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T
C T G A C T G A A C T G C T A G A C G T A G T C T C G A A C G T A G C T T C A G G T C A A G T C T G A C G A C T G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCTCTGTCC-
NAGGTCANTGACCT
A C G T C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAGTCTCTGTCC
AGGTCTCTAACC
C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGTCTCTGTCC-
ACCACTCTCGGTCAC
A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAGTCTCTGTCC-
AGTATTCTCGGTTGC
A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C