Information for 12-AMCATGCGAT (Motif 23)

C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
Reverse Opposite:
C G T A C G A T A G T C A C T G G A T C G T C A A C G T A C T G C A G T A C G T
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.792
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets71.4 +/- 52.5bp
Average Position of motif in Background101.3 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OLIG1/MA0826.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AMCATGCGAT
AACATATGTT
C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

TFAP4(var.2)/MA1570.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AMCATGCGAT
AACATATGTT
C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
T C G A G T C A A T G C C G T A A G C T T C G A A G C T A C T G C A G T A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AMCATGCGAT
ACCATATGGT
C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AMCATGCGAT
CGACCATCTGTT
A C G T A C G T C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T

BHLHE23/MA0817.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AMCATGCGAT-
AAACATATGTTT
A C G T C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AMCATGCGAT
ACCATATGTT
C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AMCATGCGAT
ACCATATGTT
C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

ATOH7/MA1468.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AMCATGCGAT
GACATATGTT
C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T
C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AMCATGCGAT-
NGCCATATGGTG
A C G T C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AMCATGCGAT----
NNNTCCATCCCATAANN
A C G T A C G T A C G T C G T A G T C A A G T C G T C A A C G T C T A G A G T C A C T G G C T A C G A T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A