Information for 8-GAACCGTCTG (Motif 27)

A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.238e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background118.7 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GAACCGTCTG-
---CTGTCTGG
A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAACCGTCTG-
-VBSYGTCTGG
A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GAACCGTCTG
-AACCGANA-
A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAACCGTCTG----
-NNCCATCTGTNNN
A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAACCGTCTG--
--ACCATCTGTT
A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NEUROD1/MA1109.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAACCGTCTG---
NNNCCATCTGTNN
A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAACCGTCTG-----
CCNNACCATCTGGCCTN
A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAACCGTCTG------
NNTNNTGTCTGGNNTNG
A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAACCGTCTG--
--GCCATCTGTT
A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAACCGTCTG---
VAGRACAKNCTGTBC
A C G T A C G T A C T G C G T A C G T A A G T C A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C