Information for 3-MYKCCTAKRTGA (Motif 5)

G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
Reverse Opposite:
A C G T A T G C G T C A A G T C G T C A A C G T C G T A A C T G A C T G G T C A C T A G A C G T
p-value:1e-5
log p-value:-1.170e+01
Information Content per bp:1.809
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif320.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets111.0 +/- 58.0bp
Average Position of motif in Background94.5 +/- 70.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----MYKCCTAKRTGA
GATAACATCCTAGTAG-
A C G T A C G T A C G T A C G T A C G T G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

TBXT/MA0009.2/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--MYKCCTAKRTGA--
TCACACCTAGGTGTGA
A C G T A C G T G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A A C G T A C G T
G A C T T G A C C T G A A G T C C T G A G A T C T G A C G C A T C T G A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----MYKCCTAKRTGA-
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A C G T G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---MYKCCTAKRTGA
RGMCCTACTRTGTGC
A C G T A C G T A C G T G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:MYKCCTAKRTGA
--GGGTACGTGC
G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------MYKCCTAKRTGA
NNGGCCACGCCTTTN---
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--MYKCCTAKRTGA
NNCTTCCTGN----
A C G T A C G T G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:MYKCCTAKRTGA
----CTAATKGV
G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

TBX19/MA0804.1/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----MYKCCTAKRTGA----
TTTCACACCTAGGTGTGAAN
A C G T A C G T A C G T A C G T G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A A C G T A C G T A C G T A C G T
C G A T C G A T G A C T T G A C C T G A G A T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T T C A G G A C T A C T G C T G A G T C A G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:MYKCCTAKRTGA
AGGCCTAG----
G T C A G A C T A C G T G T A C A G T C A C G T C G T A A C G T C T A G A C G T A T C G G T C A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T