| p-value: | 1e-2 |
| log p-value: | -4.821e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 25.00% |
| Number of Background Sequences with motif | 479.2 |
| Percentage of Background Sequences with motif | 0.20% |
| Average Position of motif in Targets | 24.0 +/- 0.0bp |
| Average Position of motif in Background | 94.9 +/- 116.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCTAAC TGACCT--- |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCTAAC TGACCTYA- |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GACCTAAC---- TTGACCTANTTATN |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCTAAC- TGACCTARTT |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCTAAC- TGACCTARTT |
|
|
|
FOSL1::JUND(var.2)/MA1143.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GACCTAAC ATGACGTAAC |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GACCTAAC NTGACCTN-- |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GACCTAAC- NTGACCTAATT |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GACCTAAC NTGACCTCN- |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCTAAC--- TGACCTANTTAN |
|
|
|