Information for 2-TCGGGTTAGC (Motif 8)

A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G C G T A
p-value:1e-3
log p-value:-8.819e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background94.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TCGGGTTAGC
--GGATTAGC
A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

SIX1/MA1118.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCGGGTTAGC
TATCAGGTTAC-
A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGGGTTAGC
-CGGATTAN-
A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCGGGTTAGC--
CGCGCCGGGTCACGTA
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PITX1/MA0682.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGGGTTAGC
-NGGATTAN-
A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGGGTTAGC
NNGGATTAGN
A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCGGGTTAGC----
NNAAGGGATTAACGANT
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

DPRX/MA1480.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCGGGTTAGC-
-NGGATTATCT
A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C G T
A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCGGGTTAGC
GNGGATTAGN
A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCGGGTTAGC
-GGGATTANN
A C G T A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A G T C
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G