Information for 9-CCTATTACAA (Motif 31)

A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T C G T A C G T A A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.016e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background52.0 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CCTATTACAA----
CCGTATTATAAACAA
A C G T A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCTATTACAA-----
NCGTATTATAATCNTA
A C G T A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

BSX/MA0876.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCTATTACAA
CCAATTAA--
A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCTATTACAA
AACCAATTAAT-
A C G T A C G T A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTATTACAA-----
NANTATTATAATTNNN
A C G T A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

MSX2/MA0708.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTATTACAA
CCAATTAA--
A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTATTACAA-----
NNTAATTATAATTNNN
A C G T A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTATTACAA
GCAATTAG--
A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T

LHX1/MA1518.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTATTACAA
GCAATTAC--
A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A
A T C G G A T C T G C A G C T A A C G T A G C T C G T A T A G C A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTATTACAA
CCAATTAG--
A G T C A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A C G T A
A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T