Information for 12-GACCATAGAT (Motif 30)

A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A A C G T A C T G A C T G A C G T A G T C
p-value:1e-3
log p-value:-7.781e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background96.7 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GACCATAGAT-----
TGACCATATATGGTCA
A C G T A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACCATAGAT--
GGCCATAAATCA
A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACCATAGAT-----
NNCCATAAATCATNN
A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACCATAGAT
NWAACCACADNN
A C G T A C G T A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GACCATAGAT--
--CCATATATGG
A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACCATAGAT
AAACCACAGC-
A C G T A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GACCATAGAT----
----ATTGATTYND
A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GACCATAGAT-
-NTNATCGATA
A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T
A C G T G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

PBX2/MA1113.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GACCATAGAT----
-GTCATAAATCATT
A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCATAGAT
AAACCACAGAN
A C G T A C T G C G T A A G T C A G T C C G T A A C G T C G T A A C T G C G T A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C