Information for 3-GCGAATAC (Motif 35)

A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C G T A C G T A G T C A C T G A G T C
p-value:1e-2
log p-value:-5.424e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets172.0 +/- 0.0bp
Average Position of motif in Background79.7 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCGAATAC
NNGGGGAATNC
A C G T A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGAATAC-------
CATACAATACGAAATAA
A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PB0138.1_Irf4_2/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCGAATAC-
GNNACCGAGAATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGAATAC----
GCGCATGCGCAC
A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCGAATAC
WAAGTAAAYA-
A C G T A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCGAATAC-----
-SSAATCCACANN
A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGAATAC
TTATGCAAAT--
A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:8
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------GCGAATAC--
NNNTNGGGCGTATNNTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGAATAC
GCAATTAC
A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C
T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGAATAC----
GNNAGCTAATCCCCCN
A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T