Information for 8-GACAATGGAG (Motif 15)

A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
Reverse Opposite:
A T G C A C G T A G T C A G T C C G T A A C G T C G A T A C T G A C G T A G T C
p-value:1e-7
log p-value:-1.805e+01
Information Content per bp:1.953
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets95.2 +/- 49.3bp
Average Position of motif in Background80.7 +/- 46.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GACAATGGAG
AAACAATGGAA
A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GACAATGGAG
AAACAATGGCA
A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:3
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----GACAATGGAG
VVRRAACAATGG--
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GACAATGGAG
GACAATGNN-
A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGGAG
VRAACAATGG--
A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GACAATGGAG
AAAACAATGG--
A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GACAATGGAG
RACAAWGG--
A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GACAATGGAG
RAACAATGGN-
A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GACAATGGAG
GAACAATGGN-
A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:10
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GACAATGGAG
BMRVACAAWGGV-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C T G A C T G C G T A A T C G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T