Information for 6-TAGCACATATCC (Motif 8)

A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A
p-value:1e-4
log p-value:-9.768e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets14.0 +/- 0.0bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TAGCACATATCC--
---AAGATATCCTT
A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAGCACATATCC--
CGAAGCACACAAAATA
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0096.1_Zfp187_1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TAGCACATATCC
TTATTAGTACATAN--
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAGCACATATCC
--GCACGTACCC
A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0163.1_Six6_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAGCACATATCC----
ATGGGATATATCCGCCT
A C G T A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGCACATATCC
--GCACGTAY--
A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

MXI1/MA1108.2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TAGCACATATCC
-GACACATGGC-
A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TAGCACATATCC
----ACATATGG
A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGCACATATCC
TTMACACCTT---
A C G T A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TAGCACATATCC
ATTAACACCT----
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T A C G T