Homer de novo Motif Results (motif_results/SRR12081057//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 259
Total background sequences = 46308
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A T G A C T G A G C T T C A G G A T C A C G T A T C G G C T A A C T G A C G T C A T G A C G T 1e-29-6.751e+015.79%0.03%53.3bp (93.7bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.656)
More Information | Similar Motifs Found
motif file (matrix)
2 T A C G C G T A C T A G A C G T C T A G A C G T C A T G G C A T A G T C A G T C C A G T C A T G 1e-26-6.214e+015.41%0.03%58.9bp (40.1bp)PB0130.1_Gm397_2/Jaspar(0.717)
More Information | Similar Motifs Found
motif file (matrix)
3 C G T A A C T G C G A T C G T A A G T C A C G T A T C G A G T C A T C G A C T G 1e-17-4.083e+013.47%0.02%52.8bp (58.8bp)PB0152.1_Nkx3-1_2/Jaspar(0.708)
More Information | Similar Motifs Found
motif file (matrix)
4 A G T C C G T A A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A G T C C G T A 1e-13-3.070e+011.93%0.00%46.0bp (28.6bp)Esrrg/MA0643.1/Jaspar(0.601)
More Information | Similar Motifs Found
motif file (matrix)
5 A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C T G G T A C 1e-13-3.070e+011.93%0.00%55.9bp (7.9bp)COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer(0.618)
More Information | Similar Motifs Found
motif file (matrix)
6 A C T G A G T C C G T A A G T C C G T A C G A T T G C A A C G T A C T G C G T A A C T G A G T C 1e-13-3.070e+011.93%0.00%34.9bp (43.0bp)MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer(0.626)
More Information | Similar Motifs Found
motif file (matrix)
7 T G A C A G T C A C G T A C T G A C T G A T C G A C G T T C A G T G A C A C G T 1e-12-2.775e+016.18%0.51%60.4bp (59.9bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.717)
More Information | Similar Motifs Found
motif file (matrix)
8 * C A T G G C A T C T G A C T G A G C A T T A G C G T A C A G T C C G T A A C T G C G T A G A C T 1e-11-2.724e+011.93%0.01%50.8bp (41.5bp)Hand1::Tcf3/MA0092.1/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T C T G A C G T A A C G T G T C A A G T C C G T A A G C T C G T A A T G C C G T A A T G C 1e-11-2.642e+012.70%0.03%65.9bp (65.1bp)PB0028.1_Hbp1_1/Jaspar(0.700)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G T A A G T C A G T C A G T C G T C A C G T A A C T G A C T G A C G T A G T C 1e-11-2.631e+015.02%0.31%41.2bp (60.9bp)PB0014.1_Esrra_1/Jaspar(0.841)
More Information | Similar Motifs Found
motif file (matrix)
11 * C G T A A C T G G A T C G T C A G T C A C G A T A G T C C G T A A C G T C G T A A G C T C G T A 1e-11-2.607e+013.47%0.09%54.1bp (60.5bp)PBX1/MA0070.1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C T G A T G C C G T A C G T A C G T A C G T A A C T G C G T A A C T G C G A T A C T G C G T A 1e-10-2.524e+012.32%0.02%56.9bp (34.8bp)ZNF652/MA1657.1/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
13 * A G T C A G C T A G T C A T G C A C T G A C T G C G T A G T A C 1e-10-2.517e+015.02%0.34%69.9bp (51.8bp)HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer(0.667)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A A C T G C G T A C T G A A C G T A C T G G T C A C G T A A C G T A C G T C G T A A C T G 1e-10-2.437e+013.47%0.11%44.7bp (62.7bp)PH0147.1_Pou3f2/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C A G T C A G T C A G T C C G T A A G T C A C G T A G T C G T C A A C G T C T A G C T A G 1e-10-2.430e+012.70%0.04%63.9bp (55.2bp)KLF4/MA0039.4/Jaspar(0.663)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C G T A G T C C G T A A C G T C G T A A G T C C G T A A G T C C G T A A C G T A G T C C G T A 1e-10-2.390e+011.54%0.00%28.5bp (0.0bp)PH0134.1_Pbx1/Jaspar(0.638)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T C G T A C G T A C G T A A C T G 1e-10-2.390e+011.54%0.00%26.5bp (0.0bp)CDX1/MA0878.2/Jaspar(0.581)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A C G T C G A T A C G T C G T A A G C T C G A T A C T G A C G T A T C G C G T A A C T G 1e-9-2.076e+012.32%0.04%43.6bp (61.1bp)Sox17/MA0078.1/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A A C G T C G T A C A G T A C G T C T A G C G T A A G T C A C T G 1e-8-1.975e+011.93%0.02%14.7bp (43.1bp)Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer(0.694)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C G T A C T G T A C G A C T G A C T G A C T G A C T G A C G T A C T G C G T A 1e-8-1.903e+012.70%0.09%41.2bp (67.0bp)PB0100.1_Zfp740_1/Jaspar(0.749)
More Information | Similar Motifs Found
motif file (matrix)
21 * A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A 1e-7-1.761e+012.32%0.06%41.0bp (45.2bp)HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer(0.744)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G T A A C G T C G T A A C G T A G T C C G T A C G T A A G T C A C G T A G T C C G T A A G T C 1e-7-1.733e+011.16%0.00%41.6bp (24.6bp)PB0105.1_Arid3a_2/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G 1e-7-1.701e+013.47%0.26%49.9bp (58.8bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.678)
More Information | Similar Motifs Found
motif file (matrix)
24 * C A T G A C T G C G T A T A C G C T G A C T A G A C T G C T G A A C T G T G C A 1e-6-1.460e+016.18%1.31%41.5bp (62.6bp)ZNF263/MA0528.2/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C A G T C C G T A C G T A A G T C C G T A A G T C A G T C A C G T A G T C 1e-6-1.434e+011.93%0.06%70.8bp (67.4bp)PB0117.1_Eomes_2/Jaspar(0.824)
More Information | Similar Motifs Found
motif file (matrix)
26 * G A C T A G T C G A C T A G T C G A C T G A T C G C A T A T G C G C A T G A T C G A C T T G A C 1e-5-1.204e+0111.97%4.94%57.5bp (64.4bp)PRDM1/MA0508.3/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
27 * G A C T G C T A G T A C G A T C A G T C T G A C A C T G A T C G 1e-4-1.030e+018.11%2.94%52.3bp (60.0bp)PB0156.1_Plagl1_2/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
28 * G C T A T C G A T G A C G T A C G T C A C G T A T G A C G A T C G C T A C G T A A G T C G T A C 1e-4-9.409e+008.49%3.37%63.0bp (61.1bp)FOXE1/MA1487.1/Jaspar(0.658)
More Information | Similar Motifs Found
motif file (matrix)
29 * C G T A A C T G A G C T C G T A A G T C C G T A C G T A C T A G A G C T A C T G C G T A A C G T 1e-3-6.916e+000.77%0.02%54.4bp (80.6bp)MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer(0.606)
More Information | Similar Motifs Found
motif file (matrix)