Information for 2-GCCTGATCCG (Motif 6)

A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-9.152e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background135.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCCTGATCCG
--ATAATCCC
A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTGATCCG-
-CCTAATCCGC
A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Dmbx1/MA0883.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGATCCG-----
NNNATTAATCCGNTTNA
A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGATCCG-----
NNNATTAATCCGNTTNA
A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCTGATCCG--
GGGCCTGAGGCGGG
A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

GSC/MA0648.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCTGATCCG-
-GCTAATCCCC
A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGATCCG-----
NNNNTGACCCGGCGCG
A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCTGATCCG
-GCTAATCC-
A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCCTGATCCG
--TTAATCCG
A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCTGATCCG-----
-NNTAATCCNGNCNN
A C T G A G T C A G T C A C G T A C T G C G T A A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A