| p-value: | 1e-4 |
| log p-value: | -9.631e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 2.4 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 180.0 +/- 0.0bp |
| Average Position of motif in Background | 91.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0048.1_Nkx3-1_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGCTTAAATGGC---- NTNNTTAAGTGGNTNAN |
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PB0184.1_Tbp_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TGCTTAAATGGC GNNCGCTTAAATCGG |
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BARHL2/MA0635.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TGCTTAAATGGC --GCTAAACGGT |
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PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGCTTAAATGGC---- NTNNTTAAGTGGTTANN |
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Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TGCTTAAATGGC ---TTAAGTGGT |
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ISL2/MA0914.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TGCTTAAATGGC ---TTAAGTGC- |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TGCTTAAATGGC- ---GTTAATGGCC |
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BARHL1/MA0877.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TGCTTAAATGGC ---CTAAACGG- |
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MSX2/MA0708.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TGCTTAAATGGC ---NTAATTGG- |
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CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TGCTTAAATGGC- -CCATATATGGNA |
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