Information for 9-CGTCATTGCA (Motif 28)

A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A C G T A A C G T A C T G C G T A A G T C A C T G
p-value:1e-3
log p-value:-8.923e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGTCATTGCA---
-GGGATTGCATNN
A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

NR1H4/MA1110.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGTCATTGCA
NAGGTCATTGA-
A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T

Atf1/MA0604.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGTCATTGCA
TACGTCAT----
A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CGTCATTGCA
NTTATTCGTCATNC--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTCATTGCA
ACGTCA-----
A C G T A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CGTCATTGCA
GTTACGTCAT----
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
C T A G G C A T A C G T C T G A G T A C T C A G C A G T T A G C T C G A A G C T A C G T A C G T A C G T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGTCATTGCA
-GTAATTGC-
A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C A C G T

LHX1/MA1518.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTCATTGCA
-NTAATTGN-
A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
A C G T A T C G G C A T T C G A C G T A C G A T A C G T C T A G T A G C A C G T

HOXA7/MA1498.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTCATTGCA
-GTAATTGC-
A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
A C G T A T C G A C G T G T C A C G T A C G A T A C G T T C A G T A G C A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTCATTGCA
-NTAATTGC-
A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A G T C C G T A
A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G T G A C A C G T