Information for 12-GCTAACTAAT (Motif 30)

A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C T G A G T C
p-value:1e-3
log p-value:-7.347e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background101.9 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GCTAACTAAT
GTTAACTAGN
A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GCTAACTAAT--
CCTTAGTTAACTAAAAT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GCTAACTAAT--
ACTTAGTTAACTAAAAA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0135.1_Phox2a/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCTAACTAAT----
NNACTAATTAATNNNN
A C G T A C G T A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T C G A G A T C A G C T G T C A C G T A A G C T A C G T C T G A C T G A A G C T C A T G T G A C A G C T T C A G

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GCTAACTAAT---
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

mix-a/MA0621.1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCTAACTAAT-
NCTAATTAANN
A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PH0030.1_Esx1/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCTAACTAAT---
ATCCATTAATTAATTGA
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C A T A G T C A T G C C T G A G A C T G A C T C G T A C T G A A G C T G A C T C T G A C T G A A G C T C A G T A T C G G C T A

PH0147.1_Pou3f2/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCTAACTAAT----
NNNACTAATTAATTANC
A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A T C C T G A G T C A T G C A G A T C C A G T G T C A C G T A C G A T C A G T C T G A C T G A C A G T G C A T G C T A G C A T A T G C

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCTAACTAAT----
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0028.1_En1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCTAACTAAT------
GCGAACTAATTAATGC
A C T G A G T C A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C