Information for 15-CATAATGAAGGG (Motif 17)

A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C G T A G T C C G T A A C G T A C G T C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.611e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CATAATGAAGGG
TATCATAATTAAGGA
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATAATGAAGGG
-ATAATGAGGT-
A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CATAATGAAGGG--
AAACATAATGAGGTTGC
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

HOXC4/MA1504.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CATAATGAAGGG
-NTAATGAN---
A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C A C G T A C G T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATAATGAAGGG
-NTAATGAN---
A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T A C G T A C G T A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CATAATGAAGGG
BAGTCATANTGAAAG-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATAATGAAGGG
-NTAATGAT---
A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATAATGAAGGG
GKTAATGR----
A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G
A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T A C G T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATAATGAAGGG--
GTAGTAATTAATGGAA
A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATAATGAAGGG--
GACGATAATGAGCTTGC
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C T G A C T G A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C