| p-value: | 1e-5 |
| log p-value: | -1.175e+01 |
| Information Content per bp: | 1.716 |
| Number of Target Sequences with motif | 13.0 |
| Percentage of Target Sequences with motif | 13.00% |
| Number of Background Sequences with motif | 1425.2 |
| Percentage of Background Sequences with motif | 2.94% |
| Average Position of motif in Targets | 89.3 +/- 48.3bp |
| Average Position of motif in Background | 101.3 +/- 59.5bp |
| Strand Bias (log2 ratio + to - strand density) | 1.8 |
| Multiplicity (# of sites on avg that occur together) | 1.38 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0002.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GRSAAGTYRC AAGGCAAGTGT- |
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NR4A2/MA0160.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GRSAAGTYRC --AAGGTCAC |
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NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GRSAAGTYRC --GAGGTCAT |
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Nr2e1/MA0676.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GRSAAGTYRC -AAAAGTCAA |
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|
|
PB0053.1_Rara_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GRSAAGTYRC--- TCTCAAAGGTCACCTG |
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|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GRSAAGTYRC -AGRGGTCA- |
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|
|
PB0155.1_Osr2_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GRSAAGTYRC---- NNTGTAGGTAGCANNT |
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|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GRSAAGTYRC -CGAGGTCAC |
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|
|
RFX7/MA1554.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GRSAAGTYRC--- ----CGTTGCTAT |
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|
CREB3L4/MA1474.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GRSAAGTYRC- TGCCACGTCACC |
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