Information for 1-AAGATCGGCC (Motif 9)

C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
Reverse Opposite:
A T C G C T A G A G T C G T A C A C T G C T G A A G C T A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.500e+00
Information Content per bp:1.836
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR5A1/MA1540.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAGATCGGCC
GTCAAGGTCAC--
A C G T A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGATCGGCC
CAAAGGTCAAA-
A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AAGATCGGCC
TCAAGGTCAN--
A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGATCGGCC
TCAAGGTCAT--
A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AAGATCGGCC--
TATTCAAGGTCATGCGA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGATCGGCC
CAAAGGTCAG--
A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGATCGGCC
NTCAAGGTCA---
A C G T A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGATCGGCC
BTCAAGGTCA---
A C G T A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAGATCGGCC
TTAAAGGTCAAA-
A C G T A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAGATCGGCC
NBYCAAGGTCAC--
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C T G A A G C T A G T C A C T G C T A G A G T C A T G C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T A C G T