Information for 1-GASTWWAAAGMK (Motif 1)

A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T
Reverse Opposite:
G T C A A C G T A G T C A C G T A C G T A C G T G C T A C G A T C T G A A T G C A G C T A G T C
p-value:1e-7
log p-value:-1.778e+01
Information Content per bp:1.829
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif140.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets98.8 +/- 29.6bp
Average Position of motif in Background102.2 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GASTWWAAAGMK
-ACATCAAAGG-
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GASTWWAAAGMK
-ASATCAAAGG-
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T
A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GASTWWAAAGMK
VSCACATCAAAG--
A C G T A C G T A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GASTWWAAAGMK-
AAAGATCAAAGGAA
A C G T A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GASTWWAAAGMK
-ACWTCAAAGG-
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T
A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

TCF7/MA0769.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GASTWWAAAGMK
-ANATCAAAGNN
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T
A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GASTWWAAAGMK-
-ACTATAAATAGA
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T A C G T
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GASTWWAAAGMK-----
--GTATAAAAGGCGGGG
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GASTWWAAAGMK-----
--GTATAAAAGGCGGGG
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GASTWWAAAGMK-
-GCTATAAATAGC
A C T G C T G A A T C G A G C T C G T A C G A T C G T A C G T A C G T A A C T G G T C A A C G T A C G T
A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C