Information for 18-ARAAAGAATAGC (Motif 19)

C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C
Reverse Opposite:
T A C G A G T C A C G T G T C A A C G T C A G T G A T C A G C T A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.564e+00
Information Content per bp:1.713
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1103.3
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets89.0 +/- 63.7bp
Average Position of motif in Background98.8 +/- 69.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ARAAAGAATAGC
-CCAAAAATAG-
C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ARAAAGAATAGC--
----GGAACAGCCG
C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

ZNF341/MA1655.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ARAAAGAATAGC---
---GGGAACAGCCAC
C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ARAAAGAATAGC
AAGAGGATTAG-
C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ARAAAGAATAGC
DCYAAAAATAGM
C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ARAAAGAATAGC-
ATGCTAAAAATAGAA
A C G T A C G T C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ARAAAGAATAGC
KCCAAAAATAGC
C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ARAAAGAATAGC
AGAAACGAAAGT
C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ARAAAGAATAGC------
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

MEF2A/MA0052.4/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ARAAAGAATAGC--
TTCTAAAAATAGAAA
A C G T C G T A C T A G T C G A T C G A C T G A C T A G G C T A C G T A A C G T C G T A A C T G A T G C A C G T A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A