Information for 5-ACAGACCAATGC (Motif 11)

C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T
p-value:1e-3
log p-value:-9.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACAGACCAATGC-
-NTGGCCAATGAG
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

SOX12/MA1561.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACAGACCAATGC
ACCGAACAATG-
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G A C G T

SOX14/MA1562.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACAGACCAATGC
-CCGAACAATG-
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
A C G T T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G A C G T

SOX8/MA0868.2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACAGACCAATGC
--AGAACAATGG
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACAGACCAATGC
GGCAAAAGTCCAATAA
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACAGACCAATGC-
---AGCCAATCGG
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACAGACCAATGC
--AAAACAATGG
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACAGACCAATGC
--VRAACAATGG
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACAGACCAATGC
---GAACAATGG
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACAGACCAATGC
HNRAATCAAT--
C G T A A G T C C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C G T A C T G A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T