Information for 9-GGCCAGCACAAC (Motif 10)

A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A C T G A C T G A G T C A G T C
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets133.8 +/- 56.0bp
Average Position of motif in Background126.5 +/- 38.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGCCAGCACAAC---
-CCAAGCCCAACCAG
A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GGCCAGCACAAC-----
--ATGTCACAACAACAC
A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCCAGCACAAC----
AADGAGVCANYASTACAGNC
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GGCCAGCACAAC--
----RNAACAATGG
A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

SOX12/MA1561.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGCCAGCACAAC-
--ACCGAACAATG
A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T
A C G T A C G T G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCCAGCACAAC--
TNCCATAGCAACNN
A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGCCAGCACAAC
-CCAGGAACAG-
A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCCAGCACAAC-
NCTANGTCAGCAAATTT
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GGCCAGCACAAC---
---BMRVACAAWGGV
A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

Plagl1/MA1615.1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------GGCCAGCACAAC
CCCTGGGGCCAGG-----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C G T C A A C T G T G A C C G T A A G T C C G T A C G T A A G T C
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T A C G T A C G T A C G T A C G T