Information for 6-ACTCGACAGA (Motif 26)

C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C G T A G T C A C T G C G T A A C T G A C G T
p-value:1e-3
log p-value:-8.772e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.0 +/- 0.0bp
Average Position of motif in Background174.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTCGACAGA
--TTGACAGC
C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACTCGACAGA
--TTGACAGG
C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

PB0179.1_Sp100_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ACTCGACAGA
NNTTTANNCGACGNA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTCGACAGA
SSAATCCACANN
A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACTCGACAGA
--TTGACAG-
C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTCGACAGA
TCCAATCCACA--
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTCGACAGA
TCTAGACA--
C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTCGACAGA
ATTCTCGCGAGA
A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACTCGACAGA
ACCACTCAAAA--
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACTCGACAGA
NSCACTYVAV---
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T