Information for 12-TGTGTGACAATA (Motif 13)

A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:TGTGTGACAATA--
-----GACAATGNN
A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGACAATA-
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGACAATA
AAGGTGTGAAAAT-
A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGTGTGACAATA
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACAATA
AGGTGTGAAM---
A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGTGTGACAATA--
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGACAATA
BTGABTGACAGS-
A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACAATA
AGGTGTGA-----
A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGACAATA
ATGTGGGAAA---
A C G T A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGTGTGACAATA
---TTGACAG--
A C G T A C T G A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T