Information for 11-GCCCTTCAATAT (Motif 12)

A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C G T A C T G C G T A C G T A A C T G A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 24.2bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCCTTCAATAT-----
ATGGTTCAATAATTTTG
A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCCTTCAATAT---
-NNTNNCAATATTAG
A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCCTTCAATAT---
-NNTNNCAATATTAG
A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCCTTCAATAT---
TCACCCATCAATAAACA
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCCTTCAATAT
---RRTCAATA-
A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T
A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCCCTTCAATAT
GTGACCTTGRVN--
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTCAATAT
TGACCTTGAN---
A C G T A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCCCTTCAATAT
NNNNATGACCTTGANTN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCCCTTCAATAT-----
--CTTTCANTATGACTV
A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCCTTCAATAT--
AATCAATTCAATAATT
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T