Information for 6-CAAGTTCAAGAG (Motif 6)

A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
Reverse Opposite:
A G T C A G C T A G T C G C A T A C G T A C T G C G T A C T G A A G T C C G A T A C G T A T C G
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.816
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets77.8 +/- 31.6bp
Average Position of motif in Background90.7 +/- 48.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR6A1/MA1541.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CAAGTTCAAGAG---
GTCAAGTTCAAGGTCAA
A C G T A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CAAGTTCAAGAG-
TATTCAAGGTCATGCGA
A C G T A C G T A C G T A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTTCAAGAG
CAAAGKTCAA---
A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T

ESRRA/MA0592.3/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAAGTTCAAGAG
GCTCAAGGTCACA--
A C G T A C G T A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAAGTTCAAGAG
TCAAGGTCAT---
A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAAGTTCAAGAG
TCAAGGTCATA--
A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAAGTTCAAGAG
TCAAGGTCAN---
A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CAAGTTCAAGAG
AAAGTTCAT---
A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAAGTTCAAGAG
CAAGGHCANV--
A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAAGTTCAAGAG
BTCAAGGTCA----
A C G T A C G T A T G C C G T A C G T A A C T G A G C T A C G T A G T C C G T A C G T A C T A G C T G A C T A G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T