Information for 18-CCAGACACCCAG (Motif 21)

A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.761e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background177.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CCAGACACCCAG
CCAGACRSVB--
A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCAGACACCCAG
CCAGACAG----
A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCAGACACCCAG
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCAGACACCCAG
TCTAGACA-----
A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

KLF17/MA1514.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCAGACACCCAG-
CACCACGCACCCCTT
A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T
G T A C G T C A T G A C T G A C G C T A G A T C T C A G G T A C C G T A T A G C T A G C G A T C T G A C G A C T G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCAGACACCCAG
ATGCCAGACN-----
A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAGACACCCAG
BCAGACWA----
A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCAGACACCCAG--
ATAAATGACACCTATCA
A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PBX3/MA1114.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCAGACACCCAG--
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

KLF6/MA1517.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAGACACCCAG
GGCCACGCCCA-
A G T C A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A G T C C G T A A C T G
A T C G T C A G T G A C T G A C G T C A A G T C C T A G A G T C T A G C G T A C G T C A A C G T