Information for 11-CAGTCCTTGGTA (Motif 13)

A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C T G
p-value:1e-3
log p-value:-9.052e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background139.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAGTCCTTGGTA--
---TACTTGGCAGA
A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGTCCTTGGTA
-TGACCTTGAN-
A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCTTGGTA
BNTGDCCTTG---
A C G T A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGTCCTTGGTA
NTGACCTTGAN-
A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAGTCCTTGGTA-----
GGCGCTGTCCATGGTGCTGAA
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Stat5a/MA1624.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGTCCTTGGTA-
-NNTTCTTGGAAN
A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A C G T
A C G T C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGTCCTTGGTA
-TGACCTTGAV-
A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CAGTCCTTGGTA----
GGAGCTGTCCATGGTGCTGA
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAGTCCTTGGTA
CTGACCTTTG--
A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTCCTTGGTA-----
-ANTCCTTTGTCTNNNN
A G T C C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T