Information for 5-RTGCGTMCAG (Motif 12)

C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G
Reverse Opposite:
G A T C C G A T T A C G A C G T T C G A T G A C A C T G G A T C G C T A G A T C
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.582
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif84.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets91.1 +/- 47.5bp
Average Position of motif in Background86.5 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----RTGCGTMCAG--
NNNTNGTACGTAANNNN
A C G T A C G T A C G T A C G T A C G T C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----RTGCGTMCAG--
NNNTNGTACGTAANNNN
A C G T A C G T A C G T A C G T A C G T C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

ZBTB32/MA1580.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:RTGCGTMCAG---
---TGTACAGTAT
C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

GMEB2/MA0862.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RTGCGTMCAG
TTACGTAA--
C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G
A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RTGCGTMCAG-
-----CACAGN
C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----RTGCGTMCAG---
AAGCATACGCCCAACTT
A C G T A C G T A C G T A C G T C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----RTGCGTMCAG---
TCTTTGGCGTACCCTAA
A C G T A C G T A C G T A C G T C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

SMAD5/MA1557.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:RTGCGTMCAG---
---TGTCTAGACA
C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:RTGCGTMCAG---
---CGTCTAGACA
C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:RTGCGTMCAG---
---TGCCCAGNHW
C T A G C G A T C T A G T G A C A C T G A G C T G T C A A T G C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A