Homer de novo Motif Results (motif_results/SRR15726003//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1057
Total background sequences = 48435
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A C G T A C T G A A T C G A G T C C G T A C G T A C G A T A C T G A G T C A C G T G T A C 1e-20-4.673e+011.13%0.01%25.3bp (74.3bp)Gfi1b/MA0483.1/Jaspar(0.603)
More Information | Similar Motifs Found
motif file (matrix)
2 G A C T T A C G C T G A C A T G T C A G C G T A T C A G C G A T C T G A A G C T T A G C G C A T 1e-15-3.534e+010.66%0.00%50.9bp (29.0bp)PB0022.1_Gata5_1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T C T A G A C G T A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T 1e-12-2.956e+010.57%0.00%36.6bp (0.0bp)POU3F3/MA0788.1/Jaspar(0.739)
More Information | Similar Motifs Found
motif file (matrix)
4 * A G T C C G T A G A T C A G T C G T A C G T C A A G T C A G C T C T A G A G T C 1e-10-2.509e+012.46%0.46%40.1bp (58.8bp)ZNF354C/MA0130.1/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
5 * A C T G A C T G C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G C G T A A C T G 1e-10-2.394e+010.47%0.00%44.1bp (8.0bp)NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer(0.617)
More Information | Similar Motifs Found
motif file (matrix)
6 * T G A C G T C A A C G T A G T C C G T A A C T G C T A G A C T G A C T G C G T A A C T G G A T C 1e-10-2.318e+010.85%0.03%46.7bp (52.0bp)SREBF1(var.2)/MA0829.2/Jaspar(0.703)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G C G T A T A C G G T C A C A G T A T C G A T G C C T G A A C G T C G A T 1e-9-2.258e+013.69%1.10%60.1bp (58.7bp)Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.663)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C T G A G T C A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C T G A C T G 1e-8-2.049e+010.47%0.01%35.8bp (29.4bp)MAZ/MA1522.1/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C 1e-8-1.939e+010.66%0.02%25.4bp (27.9bp)PB0048.1_Nkx3-1_1/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T 1e-8-1.936e+010.76%0.03%62.4bp (53.8bp)PB0072.1_Sox5_1/Jaspar(0.708)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T A G T C 1e-8-1.850e+010.38%0.00%17.5bp (0.0bp)FOXF2/MA0030.1/Jaspar(0.701)
More Information | Similar Motifs Found
motif file (matrix)
12 * A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C 1e-8-1.848e+010.47%0.01%52.2bp (50.0bp)PB0118.1_Esrra_2/Jaspar(0.654)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T A C G T C G T A A G T C C G T A A C G T C G T A A T C G A C G T A G T C A C G T A C G T 1e-7-1.815e+010.66%0.03%43.8bp (42.4bp)NFIL3/MA0025.2/Jaspar(0.643)
More Information | Similar Motifs Found
motif file (matrix)
14 * C T G A C G T A A C T G A C G T A G T C C G T A C T A G A C G T A G C T A G T C 1e-7-1.807e+012.27%0.56%58.9bp (57.8bp)Nr2e1/MA0676.1/Jaspar(0.727)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C G T A G T C C G T A A C G T T C G A A C G T A C G T A C T G A C G T A G T C A C G T 1e-7-1.706e+010.47%0.01%51.0bp (31.4bp)bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer(0.648)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C T G A C T G A C T G A C T G A C T G A C G T A C G T A C T G A C G T C G T A 1e-6-1.596e+010.47%0.01%44.8bp (48.5bp)GFY(?)/Promoter/Homer(0.689)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G G C A T C T G A A T G C G C T A C G A T G A C T C T A G C G T A G T C A 1e-6-1.541e+013.31%1.22%59.7bp (59.3bp)ZBTB32/MA1580.1/Jaspar(0.726)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G G C T A A T C G A C G T T A C G A G T C C G T A A C T G A C G T C G T A 1e-6-1.511e+011.32%0.23%57.8bp (61.0bp)ZBTB32/MA1580.1/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C C G T A A C G T A C T G A T C G A G T C C G A T A C T G A G C T A G T C A C G T A C T G 1e-6-1.432e+010.47%0.01%56.5bp (57.8bp)Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.738)
More Information | Similar Motifs Found
motif file (matrix)
20 * A C T G A C T G C A T G A C G T C G T A C G T A C T A G C A T G C G T A C T A G 1e-5-1.352e+011.70%0.43%59.1bp (59.1bp)POU6F1(var.2)/MA1549.1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
21 * C G T A A C T G C G T A A C T G A G C T C G T A A C G T A C T G C G T A A G T C A G T C G T A C 1e-5-1.329e+010.28%0.00%15.9bp (0.0bp)MF0004.1_Nuclear_Receptor_class/Jaspar(0.596)
More Information | Similar Motifs Found
motif file (matrix)
22 * C G A T A G T C C G T A A G T C A G T C A C G T C T G A A G T C A G T C A C G T G T C A A G T C 1e-5-1.301e+010.38%0.01%37.9bp (50.0bp)RORA(var.2)/MA0072.1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
23 * G T C A C T A G G T C A A G T C A C T G C G T A T C A G G T C A 1e-5-1.282e+013.21%1.31%56.0bp (52.4bp)GATA1/MA0035.4/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
24 * C G T A C G T A A G T C A C G T A G T C A T G C C G T A A C G T 1e-5-1.250e+016.52%3.64%59.0bp (58.4bp)ONECUT2/MA0756.1/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
25 * T G C A A C T G A G C T C G T A A C T G A C G T A G T C A G T C 1e-4-1.142e+012.65%1.04%61.1bp (55.4bp)PB0203.1_Zfp691_2/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
26 * C T A G A C G T A G C T A C G T A C T G C G T A A T C G A T C G A T G C A C T G 1e-4-1.075e+010.76%0.11%61.5bp (58.8bp)TFAP2C(var.2)/MA0814.2/Jaspar(0.669)
More Information | Similar Motifs Found
motif file (matrix)
27 * C G T A A C G T A C G T A C T G A C T G A C G T A G T C A G T C A C G T A G T C 1e-4-1.069e+010.57%0.05%47.5bp (63.8bp)ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer(0.668)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A C T G C G T A A G T C A G T C A C G T A T G C A G C T G T A C C G T A A C T G C G T A 1e-4-1.030e+010.38%0.02%59.5bp (67.7bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.666)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C T G A G T C A T G C C T G A A C G T A C T G A C T G A C T G 1e-4-1.021e+013.12%1.42%55.3bp (60.1bp)MXI1/MA1108.2/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A G C T A G T C A C G T A C T G A G T C A C G T A G T C C T G A A C T G A C T G A C T G 1e-4-1.002e+010.28%0.01%56.1bp (38.2bp)ZBTB6/MA1581.1/Jaspar(0.608)
More Information | Similar Motifs Found
motif file (matrix)
31 * G T A C C A T G A T G C A T C G A G T C G T C A A C G T A T G C 1e-4-9.684e+001.42%0.42%57.7bp (54.2bp)ZBTB14/MA1650.1/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
32 * T A G C C G T A A G T C A T G C A C T G T C G A A G T C T G A C 1e-4-9.301e+003.59%1.82%58.0bp (53.1bp)TCF3/MA0522.3/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
33 * C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C G T A C T G A C T G A C T G 1e-3-9.176e+000.28%0.01%41.7bp (92.9bp)NEUROD1/MA1109.1/Jaspar(0.654)
More Information | Similar Motifs Found
motif file (matrix)
34 * A G T C A C G T G C A T T C G A C T A G A T G C A C G T G A T C 1e-3-8.791e+006.24%3.88%53.6bp (56.7bp)Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer(0.627)
More Information | Similar Motifs Found
motif file (matrix)
35 * A T C G T G C A C T A G T G A C G C T A G A T C C A T G C T G A 1e-3-8.507e+008.88%6.09%58.3bp (57.1bp)PB0099.1_Zfp691_1/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
36 * C A T G T C A G C A G T A T C G A C G T T C G A C A G T T A C G C G A T T A C G 1e-3-8.229e+0012.38%9.13%53.6bp (66.3bp)PB0130.1_Gm397_2/Jaspar(0.647)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A 1e-3-6.987e+000.19%0.01%53.5bp (17.0bp)COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer(0.702)
More Information | Similar Motifs Found
motif file (matrix)
38 * C G T A G A T C C G T A C G T A T A C G A C G T C A T G C G T A A C G T A C T G A C T G C T G A 1e-3-6.987e+000.19%0.01%42.2bp (40.2bp)HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer(0.629)
More Information | Similar Motifs Found
motif file (matrix)
39 * A C T G A C G T A G T C A G T C A C G T A G T C A G T C A C G T A C T G A C T G A G T C A G T C 1e-1-3.836e+000.09%0.00%49.5bp (0.0bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.679)
More Information | Similar Motifs Found
motif file (matrix)
40 * A C G T A C T G A G T C A G T C A G T C A C G T A G T C A C G T A C T G A G T C C G T A A G T C 1e-1-3.153e+000.09%0.01%19.8bp (66.7bp)RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer(0.722)
More Information | Similar Motifs Found
motif file (matrix)