Information for 5-CCTACGTGGG (Motif 17)

A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A G T C A C T G A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.460e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.0 +/- 0.0bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYCN/MA0104.4/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCTACGTGGG-
GGCCACGTGGCC
A C G T A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T
T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCTACGTGGG
GGGTACGTGC-
A C G T A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCTACGTGGG
-GGACGTGC-
A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCTACGTGGG
NNCCACGTGG-
A C G T A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCTACGTGGG
--TACGTGCV
A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTACGTGGG-
-CCACGTGGNN
A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T
A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CCTACGTGGG--
--TGCGTGGGYG
A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T
A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCTACGTGGG
-RTACGTGC-
A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTACGTGGG---
--TGCGTGGGCGT
A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCTACGTGGG
NCCACGTG--
A G T C A G T C A C G T C G T A A G T C A C T G A C G T A C T G A C T G A C T G
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T