Information for 25-AAATCATGTGCT (Motif 40)

C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T
Reverse Opposite:
C G T A A C T G A G T C C G T A A G T C C T G A A C G T T A C G G T C A C G A T A C G T C G A T
p-value:1e-2
log p-value:-6.635e+00
Information Content per bp:1.744
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif823.7
Percentage of Background Sequences with motif1.60%
Average Position of motif in Targets127.2 +/- 30.5bp
Average Position of motif in Background104.0 +/- 83.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AAATCATGTGCT-
GVACAGNMTGTYCTB
A C G T A C G T C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAATCATGTGCT-
GRACAGWMTGTYCTB
A C G T A C G T C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAATCATGTGCT-
AGNACANNNTGTNCTN
A C G T A C G T A C G T C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAATCATGTGCT-
GAACADWATGTTCTT
A C G T A C G T C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAATCATGTGCT-
AGNACAGNCTGTTCTN
A C G T A C G T A C G T C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

NR3C1/MA0113.3/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AAATCATGTGCT-
NGGAACATNATGTACCC
A C G T A C G T A C G T A C G T C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAATCATGTGCT-
GGGAACATTGTGTTCCC
A C G T A C G T A C G T A C G T C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

MXI1/MA1108.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAATCATGTGCT
--NNCATGTGNN
C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T
A C G T A C G T T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAATCATGTGCT
-NGKCACGTGM-
C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T
A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAATCATGTGCT
--ATCACGTGAT
C G T A G T C A C G T A C A G T A T G C G T C A A G C T C T A G A C G T C T A G A G T C C G A T
A C G T A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T