Information for 11-YCACACAGGCCT (Motif 15)

A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A G T C A G C T A C T G A C G T A T C G A C G T A C T G C T G A
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.894
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif14.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets100.6 +/- 43.1bp
Average Position of motif in Background98.6 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)2.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:YCACACAGGCCT--
------AGGCCTNG
A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:YCACACAGGCCT--
------AGGCCTAG
A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ESR2/MA0258.2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---YCACACAGGCCT
AGGTCACCCTGACCT
A C G T A C G T A C G T A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YCACACAGGCCT-
GGTCANNGTGACCTN
A C G T A C G T A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YCACACAGGCCT
CCAGACAG----
A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----YCACACAGGCCT
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

HES6/MA1493.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:YCACACAGGCCT
-AACACGTGCC-
A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T
A C G T C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-YCACACAGGCCT-
GGGGCCGAGGCCTG
A C G T A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YCACACAGGCCT
CCAGACRSVB--
A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:YCACACAGGCCT
---CACAGN---
A G C T A G T C C G T A A T G C C G T A A G T C C T G A A C T G C T A G A G T C A G T C A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T