Information for 17-CATATTGCCA (Motif 34)

A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A C G T A A C G T C G T A A C G T A C T G
p-value:1e-2
log p-value:-6.750e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background151.2 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATATTGCCA--
CTAATATTGCTAAA
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATATTGCCA--
CTAATATTGCTAAA
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CATATTGCCA--
----TTGCCAAG
A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CATATTGCCA---
-----TGCCAGCB
A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CATATTGCCA--
---CGTGCCAAG
A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CATATTGCCA---
---GGTGCCAAGT
A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CATATTGCCA
ACCATATGGC--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CATATTGCCA--
-ATATTTACATA
A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

NFIB/MA1643.1/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CATATTGCCA----
TGCCTGGCATTGTGCCAAGCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C G A T C T A G A G T C G A T C C A G T A C T G C A T G T G A C G C T A A G C T C A G T T C A G C G A T A C T G A T G C A G T C G T C A C T G A T C A G G A C T G C T A

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATATTGCCA
AACATATGTT--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C T G A G T C A G T C C G T A
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T