Information for 10-GGGTAGTCAA (Motif 31)

A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A A G T C A C G T C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.997e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background107.8 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGTAGTCAA
CGTGGGTGGTCC-
A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGTAGTCAA
YSTGGGTGGTCT-
A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGGTAGTCAA-----
TTAGGTCGTAAAATTTC
A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGTAGTCAA
-AAAAGTCAA
A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAGTCAA-----
ANNNCTAGTTAACNGNN
A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGGTAGTCAA--
-GGTCGTAAAAA
A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T
A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGTAGTCAA----
TAAGGTAATAAAATTA
A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGTAGTCAA--
-GGTCGTAAAAT
A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

FOXN3/MA1489.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGGTAGTCAA
--GTAAACAA
A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A
A C G T A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGGTAGTCAA-
-GGYAATGAAA
A C T G A C T G A C T G A C G T C G T A A C T G A C G T A G T C C G T A C G T A A C G T
A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A