Information for 21-CTCAGACTTGTT (Motif 21)

A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.055e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCAGACTTGTT-----
---AAAATTGTTATGAA
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTGTT
-BCAGACWA---
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTCAGACTTGTT--
--NAAACCTGTTTN
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTCAGACTTGTT
------ATTGTT
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTGTT
-TCACACCT---
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCAGACTTGTT-----
GGAAAAATTGTTAGGAA
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

SCRT2/MA0744.2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCAGACTTGTT-----
-NNNCACCTGTTGCTNN
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A G T A C G T A C C T G A G T A C G A T C C G A T A T C G G A C T C A G T C T A G T G A C G C A T A G C T G A C T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CTCAGACTTGTT---
------ATTGTTTAN
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCAGACTTGTT------
--TTCAATTGTTCTAAAA
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CTCAGACTTGTT-
------ATTGTTA
A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T