Information for 6-GTCTTGGCTTAG (Motif 10)

A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A C T G A G T C A G T C C G T A C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-9.644e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCTTGGCTTAG
TACTTGGCAGA-
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTCTTGGCTTAG-
-----GGATTAGC
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCTTGGCTTAG
--NTTGGCANN-
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

PITX1/MA0682.2/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTCTTGGCTTAG
----NGGATTAN
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCTTGGCTTAG
-TRTTTACTTW-
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTCTTGGCTTAG
----NGGATTAN
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCTTGGCTTAG-
-TGTTTAYTTAGC
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T
A C G T C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTCTTGGCTTAG-
----GGGATTANN
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCTTGGCTTAG
---NGGGATTA-
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCTTGGCTTAG
-NNTTGGCANN-
A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T