Information for 2-TCATTAAGAGGC (Motif 2)

A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
Reverse Opposite:
C T A G T G A C A G T C A C G T T A G C A C G T A C G T C G T A C G T A A C G T A C T G C G T A
p-value:1e-5
log p-value:-1.161e+01
Information Content per bp:1.922
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif1202.8
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets78.5 +/- 53.8bp
Average Position of motif in Background100.8 +/- 77.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-1/MA0674.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCATTAAGAGGC
GTAATTAA-----
A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCATTAAGAGGC
ATCATTAG-----
A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T A C G T A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCATTAAGAGGC
GTCATTAA-----
A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T A C G T A C G T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCATTAAGAGGC
CTCATTAAA----
A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T A C G T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCATTAAGAGGC
ATCATTAG-----
A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCATTAAGAGGC
CTAATTAA-----
A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCATTAAGAGGC
YCATTAMC----
A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCATTAAGAGGC
NNCTCATTAT-----
A C G T A C G T A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T A C G T A C G T A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCATTAAGAGGC
GTCATTAG-----
A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G A C G T A C G T A C G T A C G T A C G T

PH0153.1_Prop1/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TCATTAAGAGGC
CGAATTAATTAAGAAAC
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T C G A T C G T A C G T A A T C G C G T A A C T G A C T G A G T C
T G A C T C A G T G C A T C G A G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A C T G C G T A C G T A C T G A G A T C