Information for 21-CTCAGGTTCG (Motif 33)

A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A G T A C A G T C A C G T A T C G C G T A A C T G
p-value:1e-3
log p-value:-9.131e+00
Information Content per bp:1.949
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.4 +/- 47.0bp
Average Position of motif in Background106.3 +/- 41.5bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX1/MA1118.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGGTTCG
TATCAGGTTAC
A C G T A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTCAGGTTCG------
-TNAGTTTCGATTTTN
A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

IRF6/MA1509.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTCAGGTTCG--
---AGTTTCGGT
A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

TFAP2A/MA0003.4/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CTCAGGTTCG
ATTGCCTCAGGCCA-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCAGGTTCG------
-NTGGTTTCGGTTNNN
A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

RUNX3/MA0684.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGGTTCG
NNTTGAGGTTNN
A C G T A C G T A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGGTTCG
NNCGCCTCAGGCNN-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C A C G T

SIX2/MA1119.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGGTTCG----
GTATCAGGTTTCAGNN
A C G T A C G T A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCAGGTTCG-----
TNTGGTTTCGATACN
A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CTCAGGTTCG----
ATCCACAGGTGCGAAAA
A C G T A C G T A C G T A G T C A C G T A T G C C G T A A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A