Information for 11-GAGCAGGTGC (Motif 30)

A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A G T C A C G T A C T G A G T C A C G T A G T C
p-value:1e-3
log p-value:-7.199e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets162.0 +/- 0.0bp
Average Position of motif in Background73.0 +/- 84.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGTGC--
SDGCAGGTGCNS
A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:2
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAGGTGC--
NNGGCAGGTGCNN
A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF4/MA0830.2/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAGGTGC--
NNGGCAGGTGCNN
A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGTGC-
NNGCAGGTGNN
A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGTGC-
NNGCAGGTGNN
A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:6
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GAGCAGGTGC-
-RGCAGGTGYA
A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.83
Offset:1
Orientation:forward strand
Alignment:GAGCAGGTGC-
-GGCAGGTGCA
A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

SNAI3/MA1559.1/Jaspar

Match Rank:8
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GAGCAGGTGC-
-AACAGGTGCA
A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
A C G T C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGTGC-
NNGCAGGTGNN
A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:10
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GAGCAGGTGC-
SSRGCAGCTGCH
A C G T A C T G C G T A A C T G A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T