Information for 3-CTTTGGGTAC (Motif 10)

A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A G T C A G T C C G T A C T G A C G T A A C T G
p-value:1e-12
log p-value:-2.915e+01
Information Content per bp:1.943
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif40.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets107.7 +/- 51.9bp
Average Position of motif in Background111.5 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGGGTAC----
NNNNTTGGGCACNNCN
A C G T A C G T A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTTGGGTAC--------
-TTNGGGTACGCCNNANN
A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

RBPJ/MA1116.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTGGGTAC-
-CCTGGGAAAG
A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C G T
A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

PB0158.1_Rfx3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CTTTGGGTAC-------
ACTGACCCTTGGTTACCACAAAG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTTGGGTAC---
TACCCTAGTTACCGA
A C G T A C G T A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTTTGGGTAC------
ACTCCAAGTACTTGGAA
A C G T A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGGGTAC
TCCCCTGGGGAC
A C G T A C G T A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

FOXN3/MA1489.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTTGGGTAC
--TTGTTTAC
A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGGGTAC------
NATTTAAGTACTTANNA
A C G T A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTTTGGGTAC
-NGTGGGCAT
A G T C C G A T A G C T A C G T A C T G A C T G A C T G A C G T C G T A A G T C
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T