| p-value: | 1e-4 |
| log p-value: | -9.538e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 25.00% |
| Number of Background Sequences with motif | 2.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 173.0 +/- 0.0bp |
| Average Position of motif in Background | 45.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATAGGTGAAGGA-- --AGGTCAAGGTCA |
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RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATAGGTGAAGGA-- --AGGTCAAGGTCA |
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SNAI3/MA1559.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATAGGTGAAGGA AACAGGTGCA--- |
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SNAI2/MA0745.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATAGGTGAAGGA NNGACAGGTGCNN-- |
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PB0128.1_Gcm1_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.56 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----ATAGGTGAAGGA TGCGCATAGGGGAGGAG |
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|
|
MYOD1/MA0499.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATAGGTGAAGGA NNGACAGGTGCNN-- |
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|
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATAGGTGAAGGA-- --TGGGGAAGGGCM |
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|
SA0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATAGGTGAAGGA--------- -AANGTGAAGNANNGTNAAGG |
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|
PB0049.1_Nr2f2_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATAGGTGAAGGA TCTCAAAGGTCACGAG |
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PB0117.1_Eomes_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATAGGTGAAGGA-- GCGGAGGTGTCGCCTC |
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