Information for 8-CGCAATAACC (Motif 18)

A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A A C G T A C G T A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.946e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.5 +/- 36.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13/MA0909.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CGCAATAACC-
CCCAATAAAAC
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

NR1H4/MA1110.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGCAATAACC--
-TCAATGACCTA
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

CDX2/MA0465.2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCAATAACC-
AAGCAATAAAAA
A C G T A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

HOXD8/MA0910.2/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCAATAACC
-GCAATTAC-
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C
A C G T T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T

EN2/MA0642.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGCAATAACC
CCCAATTAGC
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

NR1D2/MA1532.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CGCAATAACC-
NTGACCCACTAACCC
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

HOXB8/MA1502.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGCAATAACC
-GCAATTAC-
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C
A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T

LHX1/MA1518.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCAATAACC
-GCAATTAC-
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C
A C G T A T C G G A T C T G C A G C T A A C G T A G C T C G T A T A G C A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCAATAACC-
-GCAATAAAAC
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
A C G T T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C

HOXA7/MA1498.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGCAATAACC
-GCAATTAC-
A G T C A C T G A G T C C G T A C G T A A C G T C G T A C G T A A G T C A G T C
A C G T A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C A C G T