Information for 8-TCGTGCTGGT (Motif 23)

A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A A C T G A G T C C G T A A G T C A C T G C G T A
p-value:1e-3
log p-value:-7.890e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets16.0 +/- 0.0bp
Average Position of motif in Background92.5 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCGTGCTGGT
NHGTCGTGAYDN-
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCGTGCTGGT
NNCCTGCTGNG
A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCGTGCTGGT--
-CATGCGGGTAC
A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCGTGCTGGT---
TCNCCTGCTGNGNNN
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGTGCTGGT-
-CCTGCTGAGH
A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCGTGCTGGT---
TNTCCTGCTGTGNNG
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCGTGCTGGT---
NNTCCTGCTGTGNNN
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGTGCTGGT-
-TATGCGGGTA
A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCGTGCTGGT----
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCGTGCTGGT
CCCCCTGCTGTG
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G