Information for 23-GCACGGCTTC (Motif 33)

A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A G T C A G T C A C T G A C G T A C T G A G T C
p-value:1e-2
log p-value:-6.901e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background141.9 +/- 74.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCACGGCTTC
GCTCGGSCTC
A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GCACGGCTTC-
-----GCTTCC
A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCACGGCTTC
NHRTCACGACDN-
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCACGGCTTC
GCACGTAY--
A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCACGGCTTC-
NNGGCCACGCCTTTN
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCACGGCTTC
GCACGTNC--
A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCACGGCTTC-----
---NNGCTTCTGTNN
A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

HES6/MA1493.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCACGGCTTC
GGCACGTGTT-
A C G T A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACGGCTTC
NNGCACGTNC--
A C G T A C G T A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACGGCTTC
BGCACGTA---
A C G T A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A G T C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T