| p-value: | 1e-3 |
| log p-value: | -7.040e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.25% |
| Number of Background Sequences with motif | 3.7 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 94.0 +/- 0.0bp |
| Average Position of motif in Background | 80.8 +/- 27.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
ZKSCAN1/MA1585.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CACTAGGTGA ATAGTAGGTG- |
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RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CACTAGGTGA- WAABTAGGTCAV |
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SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CACTAGGTGA GCAACAGGTG- |
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|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CACTAGGTGA- TATAAGTAGGTCAA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CACTAGGTGA AAYTAGGTCA |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CACTAGGTGA AAYTAGGTCA |
|
|
|
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CACTAGGTGA------ TGGCCACCAGGTGGCACTNT |
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Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CACTAGGTGA-- ----AGGTGTCA |
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|
|
CTCF/MA0139.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CACTAGGTGA----- TGGCCACCAGGGGGCGCTA |
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NR1D1/MA1531.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CACTAGGTGA- GGGTCAGTAGGTCAG |
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