Information for 9-ATCTTACTTA (Motif 17)

C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A
Reverse Opposite:
A C G T C T G A C G T A A C T G A C G T C G T A C G T A A C T G C G T A A C G T
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.974
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets93.0 +/- 55.1bp
Average Position of motif in Background93.8 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LMX1B/MA0703.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATCTTACTTA-
ATTTTAATTAA
C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T
C T G A C G A T C G A T A G C T A C G T C G T A C G T A A C G T A C G T G T C A G T C A

PH0153.1_Prop1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTACTTA-----
GNNTNTTAATTAATNCN
A C G T A C G T C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

Arid3b/MA0601.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATCTTACTTA-
ATATTAATTAA
C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

LMX1A/MA0702.2/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATCTTACTTA-
---TTAATTAA
C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A G C T A G C T C G T A G T C A A G C T A C G T T C G A T G C A

mix-a/MA0621.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATCTTACTTA--
-AATTAATTAGT
C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T A C G T
A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCTTACTTA-----
AGTTTTTAATTAATTTG
A C G T A C G T C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0100.1_Lmx1a/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATCTTACTTA-----
NNTTTTTAATTAATTCG
A C G T A C G T C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0143.1_Pou2f1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATCTTACTTA------
TACTTAATTAATNNAN
C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T G A C G A C T C G A T G T C A C G T A C G A T A C G T C G T A C G T A G A C T C G T A G A C T C T G A G A C T

DBP/MA0639.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATCTTACTTA---
-NGTTACGTAATN
C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T A C G T A C G T
A C G T A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A

PH0136.1_Phox2b/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCTTACTTA------
CNNNTTAATTAATTNNN
A C G T C G T A A C G T A G T C A C G T A C G T C G T A A G T C A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G