| p-value: | 1e-7 |
| log p-value: | -1.765e+01 |
| Information Content per bp: | 1.839 |
| Number of Target Sequences with motif | 22.0 |
| Percentage of Target Sequences with motif | 2.10% |
| Number of Background Sequences with motif | 234.3 |
| Percentage of Background Sequences with motif | 0.49% |
| Average Position of motif in Targets | 85.8 +/- 55.6bp |
| Average Position of motif in Background | 103.4 +/- 57.3bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.18 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTTTAAGGTT-- NGANTTTTATGGCTCN |
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Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAAGGTT TTTTATGGCB |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTTTAAGGTT TTTTATGGCM |
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|
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTTAAGGTT DGWTTTATGRCN |
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|
|
RUNX3/MA0684.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAAGGTT-- NNTTGAGGTTNN |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTTAAGGTT NTTTTATDRG- |
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|
|
HOXA13/MA0650.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTTAAGGTT GTTTTATTGGN |
|
|
|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAAGGTT TTTAATTGCN |
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|
|
HOXB13/MA0901.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTTAAGGTT- NNATTTTATTGGNN |
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|
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTTAAGGTT TTTTATTRGN |
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