Information for 4-CCTAAATCCT (Motif 12)

A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T
Reverse Opposite:
C T G A C T A G A C T G C G T A A G C T G C A T A G C T C T G A C T A G T C A G
p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.601
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif366.1
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets73.0 +/- 51.3bp
Average Position of motif in Background97.3 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTAAATCCT--
NNCCATAAATCATNN
A C G T A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCTAAATCCT-
GTCATAAATCATT
A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCTAAATCCT
NGYCATAAAWCH-
A C G T A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAATCCT---
NNGATCTAGAACCTNNN
A C G T A C G T A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCTAAATCCT--
NGNTCTAGAACCNGV
A C G T A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTAAATCCT
GCTAAACGGT
A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCTAAATCCT
GGCCATAAATCA-
A C G T A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T

RORC/MA1151.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTAAATCCT
TGACCTANTTAN-
A C G T A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCTAAATCCT
TAAAGTCGTAAAACGT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTAAATCCT-
AAGATATCCTT
A G T C G A T C G A C T T C G A C G T A T C G A G C A T T G A C G A T C G A C T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T