Information for 13-CCGCAATATCTC (Motif 13)

A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C T G A G T C A C T G A C T G
p-value:1e-4
log p-value:-9.292e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCGCAATATCTC
AAACCGCAA------
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCGCAATATCTC---
NGCTGCGATATCGNCGC
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

YY2/MA0748.2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCGCAATATCTC
CGCCGCCATNN---
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGCAATATCTC----
NNNCTGATATCTCNNNN
A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCGCAATATCTC
NNTNNCAATATTAG
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCGCAATATCTC
NNTNNCAATATTAG
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCGCAATATCTC
TGCSGCANTN----
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G A C G T A C G T A C G T A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCGCAATATCTC
-CCCAATAAAAC
A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
A C G T T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCGCAATATCTC
---YSTTATCT-
A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCGCAATATCTC
AGATGCAATCCC--
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C G T A A C G T C G T A A C G T A G T C A C G T A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T