Information for 2-ACTGTRTCGT (Motif 10)

C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T
Reverse Opposite:
G T C A G T A C C T A G T C G A A G T C C G T A T G A C C G T A C T A G C G A T
p-value:1e-4
log p-value:-9.478e+00
Information Content per bp:1.740
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif41.18%
Number of Background Sequences with motif3349.9
Percentage of Background Sequences with motif6.88%
Average Position of motif in Targets75.7 +/- 35.2bp
Average Position of motif in Background100.6 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTRTCGT----
GNNATTTGTCGTAANN
A C G T A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTGTRTCGT-
AATGTATCAAT
C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

DMRTA2/MA1478.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACTGTRTCGT--
AATGTAACAATT
C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T A C G T A C G T
T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

HOXB13/MA0901.2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ACTGTRTCGT--
NNATTTTATTGGNN
A C G T A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

Dmrt1/MA1603.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTGTRTCGT
GNTACTTTGTATC
A C G T A C G T A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTRTCGT
NNCTTTGTTNN
A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----ACTGTRTCGT
NNNCCATTGTGTNAN
A C G T A C G T A C G T A C G T A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACTGTRTCGT
GTCTGTTTCTA
A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----ACTGTRTCGT--
CNNNTATTGTTCNNNNN
A C G T A C G T A C G T A C G T A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

SOX2/MA0143.4/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----ACTGTRTCGT
NNCCATTGTNN---
A C G T A C G T A C G T A C G T C G T A G A T C A C G T A C T G A C G T C T A G A G C T A G T C A C T G C A G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T A C G T