Information for 2-ATTAAATTTTGA (Motif 3)

C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
Reverse Opposite:
A C G T A G T C C T G A C G T A C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C G T
p-value:1e-18
log p-value:-4.182e+01
Information Content per bp:1.974
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.5 +/- 29.3bp
Average Position of motif in Background110.2 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTAAATTTTGA
ATTAAA------
C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PHOX2B/MA0681.2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ATTAAATTTTGA
TTTAATCAAATTATAT
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATTAAATTTTGA--
NNCTNAATTATGANN
A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATTTTGA
NTAATTAATAT----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATTAAATTTTGA--
-TTAATGTTTAACC
C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A A C G T A C G T
A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C

PROP1/MA0715.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAATTTTGA
TAATTAAATTA---
A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAATTTTGA
TAATTAAATTA---
A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------ATTAAATTTTGA
TAGAGGGATTAAATTTC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C A C G T A C G T

LMX1B/MA0703.2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATTAAATTTTGA
TTAATTAAANT----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
C A G T A C G T C G T A C G T A A C G T A C G T C G T A T C G A G C T A G C T A G A C T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTAAATTTTGA
TGATTAAATTA---
A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A G C T A C T G C G T A
C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A A C G T A C G T A C G T