Information for 8-TTAATTTA (Motif 35)

A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C G T A C G T C G T A C G T A
p-value:1e-3
log p-value:-8.175e+00
Information Content per bp:1.964
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif4.02%
Number of Background Sequences with motif945.5
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets96.2 +/- 58.1bp
Average Position of motif in Background101.2 +/- 52.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0153.1_Prop1/Jaspar

Match Rank:1
Score:0.83
Offset:-5
Orientation:reverse strand
Alignment:-----TTAATTTA----
GNNTNTTAATTAATNCN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PH0011.1_Alx1_2/Jaspar

Match Rank:2
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----TTAATTTA-----
CGCATTAATTAATTGGC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0128.1_Otp/Jaspar

Match Rank:3
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----TTAATTTA----
CGTAATTAATTAATTGG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
T G A C T C A G G A C T C G T A T C G A G A C T G A C T T C G A C T G A A G C T A C G T C T G A C T G A A G C T C A G T C A T G A C T G

PH0095.1_Lhx5/Jaspar

Match Rank:4
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----TTAATTTA-----
CGAATTAATTAAATACT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

LMX1B/MA0703.2/Jaspar

Match Rank:5
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---TTAATTTA
ATTTTAATTAA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A
C T G A C G A T C G A T A G C T A C G T C G T A C G T A A C G T A C G T G T C A G T C A

PH0173.1_Uncx/Jaspar

Match Rank:6
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTTA-----
CNCNTTAATTAATTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G

PH0093.1_Lhx3/Jaspar

Match Rank:7
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----TTAATTTA-----
GAAATTAATTAAATAAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.81
Offset:-5
Orientation:forward strand
Alignment:-----TTAATTTA----
AGTTTTTAATTAATTTG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0069.1_Hoxc4/Jaspar

Match Rank:9
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----TTAATTTA-----
CGAATTAATTAACAATA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T G A C T C A G G T C A C T G A G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A A G T C G C T A T G C A G C A T G T C A

PH0136.1_Phox2b/Jaspar

Match Rank:10
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TTAATTTA-----
CNNNTTAATTAATTNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G