Information for 4-TCCACAGTGA (Motif 8)

A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C C G T A A G T C C G A T C T A G C G A T A C T G A C T G C G T A
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.832
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif46.15%
Number of Background Sequences with motif559.0
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets61.8 +/- 62.7bp
Average Position of motif in Background98.2 +/- 71.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCACAGTGA
NNCCATTGTNN
A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCACAGTGA
NNCCATTGTNN
A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

Dmrt1/MA1603.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCCACAGTGA-
GATACAAAGTATC
A C G T A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCACAGTGA--
TCCCNNGGGACN
A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A A C G T A C G T
G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCACAGTGA
CTCATTGTC-
A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCCACAGTGA
ATCCAC-----
A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCACAGTGA-----
TGCTGAGTCATNNTG
A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCCACAGTGA--
BCCWTTGTBYKV
A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A A C G T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCACAGTGA---
CTTTCANTATGACTV
A C G T A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCCACAGTGA-
-CCWTTGTYYB
A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C G T A T C G C G T A A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G