Information for 19-AACAATAGGA (Motif 36)

C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T
p-value:1e-3
log p-value:-6.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif68.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background104.8 +/- 106.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-AACAATAGGA
GAACAATGG--
A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--AACAATAGGA
AGAACAATGG--
A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----AACAATAGGA--
TAGTGAACAATAGATTT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--AACAATAGGA
AAAACAATAG--
A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.79
Offset:-7
Orientation:forward strand
Alignment:-------AACAATAGGA-----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------AACAATAGGA-
TCACGGAACAATAGGTG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AACAATAGGA
GAACAATGGN-
A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AACAATAGGA
NAACAAT----
A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:9
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----AACAATAGGA
VVRRAACAATGG--
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AACAATAGGA-
TTTAGAACAATAAAAT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T