Information for 7-GGAGCACT (Motif 25)

A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T
Reverse Opposite:
C G T A C T A G A C G T C A T G A G T C C G A T A T G C A G T C
p-value:1e-3
log p-value:-7.748e+00
Information Content per bp:1.893
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.59%
Number of Background Sequences with motif252.0
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets114.5 +/- 46.6bp
Average Position of motif in Background103.5 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.88
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCACT-----
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCACT-
GGGAGGACNG
A C G T A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCACT
CGGAGC---
A C G T A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGAGCACT---
-AAGCACTTAA
A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGAGCACT---
-AASCACTCAA
A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGAGCACT---
-MRSCACTYAA
A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGCACT----
--RSCACTYRAG
A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

ZNF274/MA1592.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCACT------
NNCGAGAACTCATACN
A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGAGCACT-----
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

ZNF263/MA0528.2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGAGCACT
GGGGGGAGGAGG
A C G T A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T A C C G T A A G T C A C G T
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G