Information for 6-CTAAGSGT (Motif 22)

A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T
Reverse Opposite:
C G T A A G T C A T G C A T G C A G C T A C G T C G T A A C T G
p-value:1e-4
log p-value:-1.048e+01
Information Content per bp:1.894
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.58%
Number of Background Sequences with motif454.4
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets108.8 +/- 62.5bp
Average Position of motif in Background102.8 +/- 56.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTAAGSGT
CTAATKGV
A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTAAGSGT--
NTAATKGTTT
A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T A C G T
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

OVOL2/MA1545.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTAAGSGT--
NNNNTAACGGTNN
A C G T A C G T A C G T A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T A C G T
T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGSGT-
NNCTAATGGNN
A C G T A C G T A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTAAGSGT
CTAAACGG
A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

OVOL1/MA1544.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTAAGSGT---
NANATAACGGTTTT
A C G T A C G T A C G T A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T A C G T A C G T
T A G C C T G A T C G A T C G A A C G T C G T A G T C A G T A C A C T G A C T G C G A T G C A T G A C T G C A T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTAAGSGT--
GGAGGGGGAA
A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T A C G T
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTAAGSGT-
CTAATCGNT
A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

Nkx3-2/MA0122.3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAAGSGT----
NTTAAGTGGTTNN
A C G T A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTAAGSGT--
GGCACCCAGGGGTGC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C T G A A T C G A T C G A C T G A C G T A C G T A C G T
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C