| p-value: | 1e-5 |
| log p-value: | -1.179e+01 |
| Information Content per bp: | 1.690 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 45.45% |
| Number of Background Sequences with motif | 2086.6 |
| Percentage of Background Sequences with motif | 2.85% |
| Average Position of motif in Targets | 92.2 +/- 64.3bp |
| Average Position of motif in Background | 100.1 +/- 67.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TGCATSTTAATK CTCATGAATATTCAT- |
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MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TGCATSTTAATK---- -GACTTTTAWTTTGAA |
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Arid3b/MA0601.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TGCATSTTAATK-- ---ATATTAATTAA |
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Pou5f1::Sox2/MA0142.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TGCATSTTAATK ATTTGCATAACAAAG |
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PH0153.1_Prop1/Jaspar
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TGCATSTTAATK------ -GNNTNTTAATTAATNCN |
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|
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TGCATSTTAATK -GHATATKCAT- |
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|
PB0170.1_Sox17_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------TGCATSTTAATK NTTNTATGAATGTGNNC- |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | TGCATSTTAATK- -----GKTAATGR |
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NKX6-1/MA0674.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | 6 |
| Orientation: | reverse strand |
| Alignment: | TGCATSTTAATK-- ------TTAATTAN |
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OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TGCATSTTAATK ATTTGCATAACAATG |
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