Information for 12-CCATGAGTAGAG (Motif 22)

A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G A T C G T A A G T C A C G T A G T C C G T A A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.746e+01
Information Content per bp:1.972
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets74.1 +/- 36.8bp
Average Position of motif in Background57.1 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCATGAGTAGAG
ATCCATTAGCA---
A C G T A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A A C G T A C G T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCATGAGTAGAG
--GTGAGTGNAC
A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

MXI1/MA1108.2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCATGAGTAGAG
NNCATGTGNN---
A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCATGAGTAGAG-
NNNTTGAGTGGNNN
A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCATGAGTAGAG
KCCAAAAATAGC-
A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCATGAGTAGAG
ACCATATGTT---
A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CCATGAGTAGAG
ACTATAAATAGA-
A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCATGAGTAGAG
CCATATATGG--
A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----CCATGAGTAGAG
NNTNTCATGAATGT--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCATGAGTAGAG
NCGTGACN----
A G T C A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C T G C G T A A C T G
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T