Information for 17-ATGTGCTATCAG (Motif 24)

C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C G T C G T A A C T G A G T C C G T A A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.373e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background24.8 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTGCTATCAG----
GATGGGGTATCATTTTT
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTGCTATCAG----
AATGGGGTATCACGTTT
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Six3/MA0631.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTGCTATCAG----
GATAGGGTATCACTAAT
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTGCTATCAG----
GATAGGGTATCACTAAT
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGTGCTATCAG----
AATAGGGTATCAATTAT
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATGTGCTATCAG
NNCATGTGNN-----
A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGTGCTATCAG----
AATAGGGTATCAATATT
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGTGCTATCAG----
AATAGGGTATCATATAT
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

GATA5/MA0766.2/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATGTGCTATCAG
--NCCTTATCTG
C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G
A C G T A C G T A C G T A G T C T A G C G C A T C G A T C G T A A C G T A G T C C G A T T A C G

ZNF317/MA1593.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGCTATCAG
NNTCTGCTGTNA-
A C G T C G T A A C G T A C T G A C G T A C T G A G T C A C G T C G T A A C G T A G T C C G T A A C T G
C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A A C G T