Information for 15-CCAATCCTCCTA (Motif 18)

A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.089e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCAATCCTCCTA
CTAATCCTCTT-
A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCAATCCTCCTA
-CNGTCCTCCC-
A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CCAATCCTCCTA
GNNAGCTAATCCCCCN-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAATCCTCCTA
AGCCAATCAGA---
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAATCCTCCTA
AACCAATCAGA---
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAATCCTCCTA
SSAATCCACANN
A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

OTX2/MA0712.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCAATCCTCCTA
NNCTAATCCCNN--
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAATCCTCCTA
NYTAATCCYB---
A C G T A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCAATCCTCCTA-
NTAGTTAATCCCCTTAN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

ZNF263/MA0528.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCAATCCTCCTA--
--CCTCCTCCCCNN
A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A G T C A G T C A C G T C G T A A C G T A C G T
A C G T A C G T T A G C A T G C A C G T T A G C T G A C C A G T T G A C T A G C A T G C G A T C T A G C A G T C