Information for 6-GGTCTCGGAC (Motif 20)

A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C T G C G T A A C T G C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.271e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTCTCGGAC--
AGTATTCTCGGTTGC
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGTCTCGGAC--
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PAX5/MA0014.3/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTCGGAC
NNGGTCACGCTC
A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTCTCGGAC-
AGGTCTCTAACC
A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGTCTCGGAC---
AAGGTCANTGACCTT
A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTCTCGGAC---
AAGGTCACTGACCTT
A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C C T G A A T G C A G C T T C A G T G C A G T A C G T A C A G C T G A C T

IRF5/MA1420.1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGTCTCGGAC
AGTTTCGGTTTCGG--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C
T C G A A C T G C A G T G C A T A C G T A G T C C T A G C T A G G A C T C G A T G C A T G T A C T C A G C T A G A C G T A C G T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGTCTCGGAC----
----GCGGACCBWA
A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTCTCGGAC--
ACCACTCTCGGTCAC
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTCTCGGAC--
TGTCTGDCACCT
A C T G A C T G A C G T A G T C A C G T A G T C A C T G A C T G C G T A A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T