| p-value: | 1e-3 |
| log p-value: | -8.951e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 2.6 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 124.0 +/- 0.0bp |
| Average Position of motif in Background | 172.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
POL004.1_CCAAT-box/Jaspar
| Match Rank: | 1 |
| Score: | 0.78 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TTAGCCAATGAA ACTAGCCAATCA- |
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NFYB/MA0502.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.75 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTAGCCAATGAA NTGGCCAATGAG |
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NFY(CCAAT)/Promoter/Homer
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA --AGCCAATCGG |
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Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA- ---GGCMATGAAA |
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Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA- ---RGCAATNAAA |
|
|
|
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA- ---GGYAATGAAA |
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|
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NFYC/MA1644.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA- --AGCCAATCAGA |
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|
NFYA/MA0060.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA- --AACCAATCAGA |
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|
|
HOXA13/MA0650.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA-- ---CCCAATAAAAC |
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Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TTAGCCAATGAA-- --HDGYAATGAAAN |
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