Information for 3-GATTCAASACCT (Motif 3)

A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T
Reverse Opposite:
C G T A A C T G A C T G A C G T A T C G G A C T A C G T C T A G G T C A G T C A A G C T T A G C
p-value:1e-5
log p-value:-1.185e+01
Information Content per bp:1.726
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif351.3
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets93.0 +/- 35.4bp
Average Position of motif in Background100.4 +/- 71.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GATTCAASACCT----
NNGGCGACACCTCNNN
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GATTCAASACCT
--TTTCACACCT
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GATTCAASACCT-
---TTVACACCTH
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T A C G T
A C G T A C G T A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GATTCAASACCT
--ATTAACACCT
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GATTCAASACCT
--TTTCACACCT
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T
A C G T A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GATTCAASACCT-
--TTTCACACCTN
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T A C G T
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GATTCAASACCT
----TCACACCT
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GATTCAASACCT----
NNTTTTCACACCTTNNN
A C G T A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX6/MA1567.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GATTCAASACCT-
---TTCACACCTN
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T A C G T
A C G T A C G T A C G T G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GATTCAASACCT
----TCACACCT
A T C G C T G A A C G T A C G T A G T C G T C A C G T A A T G C G T C A A G T C G T A C C G A T
A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T