Information for 1-TKSTTCCTTAMC (Motif 1)

A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
Reverse Opposite:
A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A T G C G T A C G T C A
p-value:1e-7
log p-value:-1.774e+01
Information Content per bp:1.809
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif203.8
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets102.0 +/- 53.4bp
Average Position of motif in Background100.7 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TKSTTCCTTAMC
--TTTCATTRCC
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TKSTTCCTTAMC
----YCATTAMC
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TKSTTCCTTAMC
-NNCTCATTAT-
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TKSTTCCTTAMC
NNCTTCCTGN--
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TKSTTCCTTAMC
---GTCATTAA-
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A C G T A C G T A C G T T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TKSTTCCTTAMC
CAGCTGTTTCCT----
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TKSTTCCTTAMC
---ATCATTAG-
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TKSTTCCTTAMC
---GTAATTAA-
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A C G T A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TKSTTCCTTAMC
---ATCATTAG-
A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C
A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G A C G T

PH0069.1_Hoxc4/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TKSTTCCTTAMC---
NNTNNTTAATTAATNCG
A C G T A C G T A C G T A C T G A T C G A C G T A C G T A G T C G T A C A C G T A C G T C G T A G T A C T A G C A C G T A C G T A C G T
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G