Information for 8-CCCATTTAGC (Motif 19)

A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C C G A T C T G A C G T A C T G A A C G T A C T G C T A G T A C G
p-value:1e-6
log p-value:-1.570e+01
Information Content per bp:1.850
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif94.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets95.4 +/- 56.0bp
Average Position of motif in Background104.6 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.79
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCCATTTAGC
ANCGTTTANN
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

BARHL1/MA0877.2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCCATTTAGC
-NCGTTTAN-
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T

GBX1/MA0889.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCATTTAGC
ACTAATTAGC
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

EN2/MA0642.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCCATTTAGC
CCCAATTAGC
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCATTTAGC
ACCACTTAA-
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCCATTTAGC----
ACCCCTAATTAGCGGTG
A C G T A C G T A C G T A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

LBX2/MA0699.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCATTTAGC
GCCAATTAGC
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C

PH0089.1_Isx/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCCATTTAGC---
ACNNCTAATTAGNNNN
A C G T A C G T A C G T A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C A C G T A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCCATTTAGC
-BCMATTAG-
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCATTTAGC
-GCACTTAA-
A T G C G A T C A G T C C G T A G A C T C G A T A G C T C G T A A T C G A G T C
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T