Information for 2-ATCTGAACTAGA (Motif 2)

C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.079e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets184.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATCTGAACTAGA----
GANGTTAACTAGTTTNN
A C G T C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATCTGAACTAGA
---TGAACTCA-
C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A
A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATCTGAACTAGA
--ATGAACTTT-
C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATCTGAACTAGA--
NNHYTGACCTAGWTT
A C G T C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATCTGAACTAGA-
---TGACCTTGAT
C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATCTGAACTAGA-
AAGATCGGAANTNNNA
A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

ESRRA/MA0592.3/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCTGAACTAGA--
-NNTGACCTTGANN
C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------ATCTGAACTAGA
CCNNACCATCTGGCCTN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATCTGAACTAGA
-NATGACCTTGA
C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATCTGAACTAGA-------
--NNGATCTAGAACCTNNN
C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G