Information for 1-ATGCAATA (Motif 3)

C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A
Reverse Opposite:
A C G T C T G A A C G T A C G T A C T G G T A C C G T A A C G T
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif35.71%
Number of Background Sequences with motif1400.6
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets94.6 +/- 26.7bp
Average Position of motif in Background98.3 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--ATGCAATA--
AGATGCAATCCC
A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A A C G T A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----ATGCAATA--
AAATGATGCAATCAT
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A A C G T A C G T
C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T

ATF4/MA0833.2/Jaspar

Match Rank:3
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----ATGCAATA-
AAATGATGCAATAA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A A C G T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----ATGCAATA---
AATCAATTCAATAATT
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:5
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ATGCAATA-
TATTATGCAATAT
A C G T A C G T A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A A C G T
C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---ATGCAATA
MTGATGCAAT-
A C G T A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

HLF/MA0043.3/Jaspar

Match Rank:7
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----ATGCAATA-
TTGTTATGCAACAA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A A C G T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ATGCAATA
TTATGCAAT-
A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ATGCAATA
ATGATGCAAT-
A C G T A C G T A C G T C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATGCAATA----
AAGCAATAAAAA
C G T A A C G T C A T G A G T C C G T A C G T A A G C T C G T A A C G T A C G T A C G T A C G T
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A