Information for 1-TGGSSCCACA (Motif 6)

A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A
Reverse Opposite:
A C G T C T A G A C G T A T C G A C T G A T G C A T C G A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.089e+01
Information Content per bp:1.877
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif32.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets131.5 +/- 19.5bp
Average Position of motif in Background96.3 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TGGSSCCACA
CCCTGGGGCCAGG
A C G T A C G T A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G

E2F4/MA0470.2/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TGGSSCCACA-
NAATGGCGCCAAAA
A C G T A C G T A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TGGSSCCACA
TTTGGCGCCAAA
A C G T A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

E2F2/MA0864.2/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TGGSSCCACA--
NNAATGGCGCCAAAAC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A A C G T A C G T
T C A G C G T A G C T A C G T A C A G T A T C G A T C G G A T C A C T G A T G C A T G C G C T A G C T A G C T A G C T A A G T C

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TGGSSCCACA---
AGCTCGGCGCCAAAAGC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGGSSCCACA
TGGGGCCCAC-
A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGGSSCCACA---
CCTTCGGCGCCAAAAGG
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F3/MA0469.3/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TGGSSCCACA--
ATTTTGGCGCCAAAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A A C G T A C G T
C T G A C G A T C G A T G C A T C A G T T A C G C A T G G A T C C T A G G T A C A T G C G T C A C G T A C G T A G C T A G A C T

PLAGL2/MA1548.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGGSSCCACA
TGGGCCCCCT
A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A
A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGGSSCCACA---
-NWAACCACADNN
A C G T A C T G A C T G A T G C A T C G G T A C A T G C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C