Information for 9-ATGAAAMTTTTC (Motif 10)

C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
Reverse Opposite:
T A C G G T C A C G T A C G T A G T C A C A G T A G C T A G C T A C G T A G T C C G T A A C G T
p-value:1e-4
log p-value:-9.566e+00
Information Content per bp:1.692
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif265.6
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets127.0 +/- 80.2bp
Average Position of motif in Background101.9 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAMTTTTC
GGYAATGAAA------
A C G T A C G T A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAMTTTTC
GGCMATGAAA------
A C G T A C G T A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATGAAAMTTTTC
ACGGCCATAAAATTAAT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ATGAAAMTTTTC
AATGCAATAAAATTTAT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ATGAAAMTTTTC
CTACCAATAAAATTCT--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGAAAMTTTTC
ATTAAA------
C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATGAAAMTTTTC
ACTGAAACCA---
A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGAAAMTTTTC
CYHATAAAAN-----
A C G T A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C A C G T A C G T A C G T A C G T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATGAAAMTTTTC
AATATGCAAATAA--
A C G T A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATGAAAMTTTTC
TTATGCAAATTA--
A C G T A C G T C G T A G A C T C T A G C G T A C T G A C T G A G T A C A C G T C G A T G A C T A C G T A T G C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T