Information for 2-TGCTAGCATCCT (Motif 4)

A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A
p-value:1e-5
log p-value:-1.182e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCTAGCATCCT-----
-GATAACATCCTAGTAG
A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGCTAGCATCCT
TGTTKCCTAGCAACM-
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGCTAGCATCCT---
-----ACATCCTGNT
A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

ATF4/MA0833.2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTAGCATCCT--
NNATTGCATCATNN
A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGCTAGCATCCT--
NNGATTGCATCATNN
A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T
C T G A C G A T C A T G T C G A G C A T C A G T C A T G G A T C C T G A G A C T G T A C G C T A A G C T G C A T G C A T

ETV4/MA0764.2/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGCTAGCATCCT--
----NNCTTCCTGN
A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCTAGCATCCT--
ADGGYAGYAGCATCT
A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGCTAGCATCCT
TGCCAGCB----
A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGCTAGCATCCT
--ATTGCATCAK
A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGCTAGCATCCT
ATTTCCCAGVAKSCY
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C