Information for 10-ACTGGTTACATA (Motif 12)

C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
Reverse Opposite:
C G A T G C T A C G A T T A C G C G A T C G T A C G T A A G T C G A T C C G T A C T A G A C G T
p-value:1e-11
log p-value:-2.639e+01
Information Content per bp:1.711
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets101.5 +/- 20.5bp
Average Position of motif in Background95.7 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRTC2/MA1479.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ACTGGTTACATA
AATTGATACATT
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

DMRTA2/MA1478.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ACTGGTTACATA
AATTGTTACATT
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACTGGTTACATA
-NTTGATACATT
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Foxl2/MA1607.1/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACTGGTTACATA--
NNTGTTTACATANN
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A A C G T A C G T
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACTGGTTACATA
--TGTTTACTTT
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACTGGTTACATA-
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACTGGTTACATA
--TGTTTACTTT
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ACTGGTTACATA
ACTAGTTAAC--
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTGGTTACATA
TTTGTTTACTTA
C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACTGGTTACATA
TGATTGGCTANN--
A C G T A C G T C G T A G A T C C G A T C T A G T C A G G C A T G A C T C G T A A T G C C G T A C G A T C G T A
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T