Information for 13-CTAATCAGGG (Motif 33)

A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G C G T A A C G T A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.469e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background136.9 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0098.1_Lhx8/Jaspar

Match Rank:1
Score:0.73
Offset:-5
Orientation:reverse strand
Alignment:-----CTAATCAGGG--
CACCGCTAATTAGNNGN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGGG---
NNTAATCCNGNCNN
A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

Lhx8/MA0705.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTAATCAGGG
CTAATTAG--
A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G
A G T C A G C T T C G A C G T A A C G T A G C T C T G A T C A G A C G T A C G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CTAATCAGGG---
TCCACTAATTAGCGGTT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
G C A T T G A C G A T C T C G A G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G T C C A T G C T A G C G A T A C G T

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTAATCAGGG
NGCTAATTAG--
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G
A T G C T A C G A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGGG
NNTAATTANN-
A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T

EVX1/MA0887.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTAATCAGGG
GNTAATTANN-
A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T

LHX6/MA0658.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTAATCAGGG
ACTAATTAGC-
A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G
T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C A C G T

PH0032.1_Evx2/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CTAATCAGGG--
CACCGCTAATTAGCGGT
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0039.1_Mnx1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTAATCAGGG---
GTACTAATTAGTGGCG
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G