Information for 9-GGAACGTATT (Motif 26)

A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A G T C A C T G A C G T A C G T A G T C A G T C
p-value:1e-3
log p-value:-8.231e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background155.6 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES6/MA1493.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAACGTATT
GGCACGTGTT
A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGAACGTATT
BGCACGTA--
A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGAACGTATT
GNNTGGAATGTGN-
A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGAACGTATT-----
TNNTTTCGTATTNNANN
A C G T A C G T A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAACGTATT
TGGAATGYRG-
A C G T A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAACGTATT
NNGCACGTNC-
A C G T A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T

TEAD4/MA0809.2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GGAACGTATT
NCTGGAATGTNN-
A C G T A C G T A C G T A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGAACGTATT
NNCTGGAATGTNN-
A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGAACGTATT
-GCACGTAY-
A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAACGTATT
TGGAATGT---
A C G T A C T G A C T G C G T A C G T A A G T C A C T G A C G T C G T A A C G T A C G T
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T