Information for 1-GADGAACAATCA (Motif 1)

A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A
Reverse Opposite:
A C G T A T C G G T C A A G C T A C G T C T A G A G C T C G A T A G T C G A T C A C G T A G T C
p-value:1e-6
log p-value:-1.576e+01
Information Content per bp:1.735
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif57.14%
Number of Background Sequences with motif1505.0
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets86.5 +/- 57.4bp
Average Position of motif in Background100.2 +/- 109.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GADGAACAATCA----
AATGAACAATGGAATT
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GADGAACAATCA----
GAAGATCAATCACTTA
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GADGAACAATCA-
-----CCAATCAA
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GADGAACAATCA
-ATGAATATTC-
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GADGAACAATCA
----AACAAT--
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A
A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GADGAACAATCA
---NAACAAT--
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GADGAACAATCA-------
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

SOX8/MA0868.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GADGAACAATCA
--AGAACAATGG
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A
A C G T A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GADGAACAATCA----
GAAGATCAATCACTAA
A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GADGAACAATCA---
TTAAGAACAATAAATT
A C G T A C T G C G T A C A T G C T A G C G T A C T G A A G T C C G T A C T G A A C G T A T G C G T C A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T