Information for 21-GGTGGTAAATGA (Motif 21)

A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C G T A C G T C G T A A G T C A G T C C G T A A G T C A G T C
p-value:1e-3
log p-value:-9.041e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets182.0 +/- 0.0bp
Average Position of motif in Background65.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0067.1_Hoxc12/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GGTGGTAAATGA--
TTAGGTCGTAAAATTTC
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

ZNF75D/MA1601.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTGGTAAATGA
ATGTGGGAAA---
A C G T A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTGGTAAATGA-
TAAAGTCGTAAAATAG
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGTAAATGA
AGGTGTTAAT---
A C G T A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTGGTAAATGA
GGTCGTAAAAT-
A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGTGGTAAATGA--
CAAGGTCGTAAAATCTT
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTGGTAAATGA
GGTCGTAAAAA-
A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

HOXD10/MA1506.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTGGTAAATGA
GGTCGTAAAAC-
A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTGGTAAATGA
NATGGAAAAN--
A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTGGTAAATGA-
TAAAGTCGTAAAACGT
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C T G A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T