Information for 10-TTGGCAAGCG (Motif 18)

A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C G T A C T G A G T C A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.960e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAAGCG
NNTTGGCANN--
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAAGCG
CTTGGCAA---
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCAAGCG
NTTGGCANN--
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---TTGGCAAGCG
TACTTGGCAGA--
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAAGCG
GGTTGGCAT---
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAAGCG
VGCTGGCA----
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCAAGCG----
GTGCCACGCGACTG
A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCAAGCG-
AAGGCAAGTGT
A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TTGGCAAGCG
NGTAGGTTGGCATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGGCAAGCG
NGTGGGCAT---
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C T G A G T C A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T