Information for 13-GTGAGACTAA (Motif 21)

A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets150.4 +/- 18.2bp
Average Position of motif in Background78.7 +/- 40.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTGAGACTAA----
ACCGTGACTAATTNN
A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGAGACTAA
AGGTGTGAAM--
A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGAGACTAA
ACTGAAACCA-
A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTGAGACTAA
AGGTGHCAGACA--
A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGAGACTAA
-BCAGACWA-
A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGAGACTAA
AGGTGTGA----
A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGAGACTAA----
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0122.1_Obox2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGAGACTAA----
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGAGACTAA
AGGTGTGA----
A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GTGAGACTAA
TGCGGAGTGGGACTGG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G