Information for 1-GRCCYCAYMMYA (Motif 1)

A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
Reverse Opposite:
A C G T C T A G A C T G A C G T C T G A A C G T A C T G C T G A A C T G A T C G A G C T A G T C
p-value:1e-7
log p-value:-1.682e+01
Information Content per bp:1.810
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif327.7
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets85.0 +/- 67.7bp
Average Position of motif in Background99.5 +/- 126.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GRCCYCAYMMYA
KGGCCYCWTD---
A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T A C G T

Plagl1/MA1615.1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GRCCYCAYMMYA
NNTGGCCCCAGNN--
A C G T A C G T A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------GRCCYCAYMMYA
TGTCGTGACCCCTTAAT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T A C G T

KLF4/MA0039.4/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GRCCYCAYMMYA
CGCCCCACCCCC
A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C

ATF2/MA1632.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GRCCYCAYMMYA
NATGACNTCATNN--
A C G T A C G T A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GRCCYCAYMMYA
NNNNTTGACCCCTNNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GRCCYCAYMMYA
TGACCTYA-----
A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GRCCYCAYMMYA--
NRGCCCCRCCCHBNN
A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GRCCYCAYMMYA
NTGACCTCN-----
A C G T A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G A C G T A C G T A C G T A C G T A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GRCCYCAYMMYA
NATGACATCATCNNN
A C G T A C G T A C G T A C T G C T G A A T G C A G T C A G C T A G T C C G T A A G C T G T C A G T A C A G T C C G T A
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T