Information for 1-GKRGCCAGATGG (Motif 1)

A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G
Reverse Opposite:
A G T C T A G C C G T A A C G T A G T C C G A T C T A G A C T G A T G C G A T C T G C A T A G C
p-value:1e-7
log p-value:-1.671e+01
Information Content per bp:1.671
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif70.00%
Number of Background Sequences with motif4323.7
Percentage of Background Sequences with motif4.72%
Average Position of motif in Targets77.3 +/- 59.1bp
Average Position of motif in Background99.7 +/- 81.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GKRGCCAGATGG---
--GGACAGATGGCAG
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GKRGCCAGATGG--
-GGAACAGATGGCA
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T A C G T
A C G T C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GKRGCCAGATGG-
---AACAGATGGC
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GKRGCCAGATGG-----
AAGGCCAGATGGTCCGG
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GKRGCCAGATGG-
ARGAGGMCAAAATGW
A C G T A C G T A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GKRGCCAGATGG-
---AACAGATGGT
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T
A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GKRGCCAGATGG-
---ACCAGATGGC
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GKRGCCAGATGG-
---AACAKATGGY
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T
A C G T A C G T A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T

TWIST1/MA1123.2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GKRGCCAGATGG--
-ATTCCAGATGTTT
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T A C G T
A C G T C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GKRGCCAGATGG--
--NGCCATATGGTG
A C T G A C G T C T A G A T C G G T A C A G T C C G T A T A C G C G T A C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G