Information for 13-GCCTTGCGAT (Motif 30)

A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C T G A G T C C G T A C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.683e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background150.5 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGCGAT
BNTGDCCTTG----
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTGCGAT
NTGACCTTGAN--
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCTTGCGAT--
---TTGCGGTTT
A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTGCGAT
TGACCTTGAN--
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGCGAT-
GCTGACCTTGAACTN
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Ebf2/MA1604.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTGCGAT
NNTCCCTTGGGAN
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

EBF3/MA1637.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTGCGAT
NNTCCCTTGGGAN
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTGCGAT
TGACCTTGAV--
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCTTGCGAT
AGGCCTAG----
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

RFX7/MA1554.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCCTTGCGAT
-CGTTGCTAT
A C T G A G T C A G T C A C G T A C G T A C T G A G T C A C T G C G T A A C G T
A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T