Information for 6-GRTTYGACASCC (Motif 8)

A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C
Reverse Opposite:
A C T G A T C G A T G C C G A T A C T G A C G T A G T C C T G A C G T A C G T A A G T C A G T C
p-value:1e-10
log p-value:-2.412e+01
Information Content per bp:1.877
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets82.5 +/- 43.4bp
Average Position of motif in Background116.2 +/- 52.1bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GRTTYGACASCC
---TTGACAGC-
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GRTTYGACASCC
---TTGACAGG-
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GRTTYGACASCC----
GTATTGACAGCTNNTT
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GRTTYGACASCC----
GTATTGACAGGTNNTT
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GRTTYGACASCC
---TTGACAG--
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GRTTYGACASCC----
NNATTGACAGGTGCTT
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GRTTYGACASCC----
NTATTGACAGCTNNTT
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GRTTYGACASCC----
GGATTGACAGGTCNTT
A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GRTTYGACASCC----
GATATTGACAGCTGCGT
A C G T A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GRTTYGACASCC----
ATAAATGACACCTATCA
A C G T A C T G C T A G A C G T A C G T A G C T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A