| p-value: | 1e-8 |
| log p-value: | -1.943e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 0.48% |
| Number of Background Sequences with motif | 1.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 37.8 +/- 18.1bp |
| Average Position of motif in Background | 109.3 +/- 31.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGATCCGTCA YCATCMATCA |
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RHOXF1/MA0719.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGATCCGTCA ATAATCCC--- |
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|
Atf1/MA0604.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TGATCCGTCA- ---TACGTCAT |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGATCCGTCA- GYCATCMATCAT |
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|
|
JUN::JUNB/MA1132.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TGATCCGTCA-- --ATGAGTCATC |
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|
|
PB0108.1_Atf1_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGATCCGTCA--- NTTATTCGTCATNC |
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|
|
FOSL1::JUND(var.2)/MA1143.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TGATCCGTCA- -GTTACGTCAT |
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|
|
PH0140.1_Pknox1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGATCCGTCA---- AAAGACCTGTCAATCC |
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|
|
XBP1/MA0844.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGATCCGTCA-- AATGCCACGTCATC |
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|
MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | TGATCCGTCA ----ACGTCA |
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