Information for 19-ATTGAGAGGG (Motif 34)

C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A G T C A C G T A G T C C G T A C G T A A C G T
p-value:1e-3
log p-value:-6.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background97.4 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAGAGGG--
NNNTTGAGTGGNNN
A C G T A C G T C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATTGAGAGGG
BTBRAGTGSN
C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTGAGAGGG-
CTTGAGTGGCT
C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:ATTGAGAGGG-
-TTGAGTGSTT
C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATTGAGAGGG
-TTGACAGC-
C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTGAGAGGG
NNTTGAGTGNN
A C G T C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAGAGGG----
NNATTGACAGGTGCTT
A C G T A C G T C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAGAGGG----
NTATTGACAGGTNNTN
A C G T A C G T C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTGAGAGGG----
GGATTGACAGGTCNTT
A C G T A C G T C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATTGAGAGGG
-TTGACAGG-
C G T A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C T G
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T