Information for 18-ACAGCAATAGAG (Motif 23)

C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T C G T A A C G T A C G T A C T G A G T C A C G T A C T G A C G T
p-value:1e-3
log p-value:-9.113e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets182.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ACAGCAATAGAG-
-AAGCAATAAAAA
C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G A C G T
A C G T C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ACAGCAATAGAG
NNTNANAACAATTNNA
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----ACAGCAATAGAG-----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0065.1_Sox15_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACAGCAATAGAG--
TAGTGAACAATAGATTT
A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAATAGAG
CACAGN-------
A C G T C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACAGCAATAGAG
-GAACAATGG--
C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAGCAATAGAG--
TNNAGAACAATANATNN
A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

SOX8/MA0868.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACAGCAATAGAG
AGAACAATGG--
C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAATAGAG
DCYAAAAATAGM-
A C G T C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACAGCAATAGAG-
AAAAAATCAATAAATA
A C G T A C G T A C G T C G T A A G T C C G T A A C T G A G T C C G T A C G T A A C G T C G T A A C T G C G T A A C T G A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A