Information for 9-RTTRGTCATA (Motif 18)

T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
Reverse Opposite:
G A C T C G T A C G A T A C T G C T G A G A T C A G T C G C T A T G C A A G C T
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.735
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif58.2
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets103.6 +/- 45.1bp
Average Position of motif in Background97.0 +/- 61.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN::JUNB/MA1132.1/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:RTTRGTCATA
ATGAGTCATC
T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
C T G A C G A T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G T A C

FOSL1::JUND/MA1142.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:RTTRGTCATA
ATGAGTCATN
T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
C T G A C A G T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G A T C

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--RTTRGTCATA-
NNATGAGTCATNN
A C G T A C G T T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A A C G T
C A T G A C G T T C G A G A C T C A T G G T C A T A C G G C A T G T A C C G T A A G C T G T A C C T G A

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--RTTRGTCATA-
NNATGAGTCATNN
A C G T A C G T T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A A C G T
A C T G C A T G T C G A A G C T C A T G G T C A T C A G C G A T G T A C C T G A A G C T G T A C T G C A

FOSL2::JUN/MA1130.1/Jaspar

Match Rank:5
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--RTTRGTCATA
GGATGAGTCATC
A C G T A C G T T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
A C T G C A T G T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T G T A C

FOS::JUN/MA0099.3/Jaspar

Match Rank:6
Score:0.79
Offset:0
Orientation:forward strand
Alignment:RTTRGTCATA
ATGAGTCATC
T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
T C G A G A C T C A T G G T C A T A C G C G A T G T A C C G T A A G C T T G A C

FOS::JUND/MA1141.1/Jaspar

Match Rank:7
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--RTTRGTCATA-
GGATGAGTCATCG
A C G T A C G T T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A A C G T
A C T G C A T G T C G A A G C T A C T G G T C A T C A G A C G T G T A C C G T A A G C T T G A C T A C G

BATF3/MA0835.2/Jaspar

Match Rank:8
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-RTTRGTCATA
NATGAGTCATN
A C G T T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A

FOSB::JUNB/MA1135.1/Jaspar

Match Rank:9
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:RTTRGTCATA
ATGAGTCATC
T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
T C G A G A C T A C T G G T C A T A C G A C G T G T A C G C T A A G C T T G A C

FOSL2::JUNB/MA1138.1/Jaspar

Match Rank:10
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:RTTRGTCATA
ATGAGTCATC
T C G A A C G T C G A T C T A G C T A G A G C T G T A C G C T A C G A T C G T A
T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T T G A C