Information for 5-CCAAACTT (Motif 29)

A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A G T C A T C A G A C G T A C G T A C G T A C T G A C T G
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.924
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif972.9
Percentage of Background Sequences with motif2.04%
Average Position of motif in Targets86.5 +/- 55.6bp
Average Position of motif in Background101.1 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CCAAACTT
-CAAGCTT
A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

IRF6/MA1509.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCAAACTT
ACCGAAACT-
A C G T A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCAAACTT
CGTGCCAAG---
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCAAACTT
GGTGCCAAGT--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAAACTT--
CCATATATGG
A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCAAACTT---
GGGTCCAAAGGTCAC
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

HNF4G/MA0484.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCAAACTT----
TCCAAAGTCCAGA
A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCAAACTT----
TCCAAAGTCCAAA
A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CCAAACTT-
CAAAATCGAAACTAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CCAAACTT-
ATAAACCGAAACCAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A