| p-value: | 1e-10 |
| log p-value: | -2.448e+01 |
| Information Content per bp: | 1.798 |
| Number of Target Sequences with motif | 12.0 |
| Percentage of Target Sequences with motif | 1.40% |
| Number of Background Sequences with motif | 41.7 |
| Percentage of Background Sequences with motif | 0.09% |
| Average Position of motif in Targets | 84.2 +/- 56.6bp |
| Average Position of motif in Background | 111.7 +/- 57.3bp |
| Strand Bias (log2 ratio + to - strand density) | 0.8 |
| Multiplicity (# of sites on avg that occur together) | 1.17 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0089.1_Isx/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCRAATTAGG--- ACNNCTAATTAGNNNN |
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PAX4/MA0068.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GACCRAATTAGG ---CTAATTAG- |
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PH0127.1_Nobox/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACCRAATTAGG---- CGCGCTAATTAGGTATC |
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|
PH0133.1_Pax7/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACCRAATTAGG---- CGAACTAATTAGTACTA |
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|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GACCRAATTAGG BTGACCTAVTTW-- |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCRAATTAGG TGACCTARTT--- |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCRAATTAGG TGACCTARTT--- |
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|
|
TLX2/MA1577.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GACCRAATTAGG ---CTAATTAG- |
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|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACCRAATTAGG TGACCTANTTAN- |
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|
PH0058.1_Hoxb3/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACCRAATTAGG---- TGAGCTAATTAGTTGGA |
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