Information for 13-AGGAGTAACTAC (Motif 18)

C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C G T A C G T C G T A A G T C A C G T A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.461e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0123.1_Obox3/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGGAGTAACTAC
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0061.1_Hoxb6/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGAGTAACTAC---
TATTGGTAATTACCTT
A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGGAGTAACTAC-
---GTTAACTAGN
C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGAGTAACTAC---
TTGGGGTAATTAACGT
A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGGAGTAACTAC--
----GTAATTACHN
C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G C T C G T A C G T A A C G T A C G T C T G A T G A C G T C A A G C T

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGAGTAACTAC----
-NNNGTAACTANGNNA
C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGGAGTAACTAC
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0062.1_Hoxb7/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGAGTAACTAC-----
-GTAGTAATTAATGCAA
C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0055.1_Hoxa7_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGAGTAACTAC-----
-GTAGTAATTAATGGAA
C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGGAGTAACTAC-
NANAGGGATTAATTATN
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G A C G T C G T A C G T A A G T C A C G T C G T A A G T C A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C