Information for 20-GGCMCWTGWC (Motif 35)

C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C
Reverse Opposite:
T C A G C G T A A G T C C G T A C G T A A C T G C A G T A T C G A G T C A G T C
p-value:1e-4
log p-value:-1.132e+01
Information Content per bp:1.689
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif8.46%
Number of Background Sequences with motif1351.7
Percentage of Background Sequences with motif2.95%
Average Position of motif in Targets100.7 +/- 55.0bp
Average Position of motif in Background98.1 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES5/MA0821.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGCMCWTGWC-
TGGCACGTGCCG
A C G T C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

HES6/MA1493.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGCMCWTGWC
GGCACGTGTT
C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T

HES2/MA0616.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCMCWTGWC
GGCACGTGCC
C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C
A T C G C A T G T G A C C T G A A G T C A C T G A G C T T C A G A G T C A T G C

USF1/MA0093.3/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCMCWTGWC--
NNGTCACATGACNN
A C G T A C G T C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C A C G T A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

HES7/MA0822.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGCMCWTGWC-
TGGCACGTGCCA
A C G T C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

USF2/MA0526.3/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCMCWTGWC--
NNGTCACATGACNN
A C G T A C G T C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCMCWTGWC
GGCACGTGTC
C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

HEY2/MA0649.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCMCWTGWC
GGCACGTGNC
C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCMCWTGWC
GTCACATGAY
C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGCMCWTGWC-----
GAGCCCTTGTCCCTAA
A C G T C T A G C T A G A T G C G T C A A G T C C G A T G C A T T C A G C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G