Information for 11-ACATAGTCTTGA (Motif 12)

C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T
p-value:1e-3
log p-value:-8.914e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ACATAGTCTTGA
----TGTCTAGA
C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACATAGTCTTGA
AAGATATCCTT--
A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACATAGTCTTGA
CCATTGTTTT--
C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACATAGTCTTGA
CTCATTGTC----
A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

PH0044.1_Homez/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACATAGTCTTGA--
AAAACATCGTTTTTAAG
A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

SMAD5/MA1557.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACATAGTCTTGA--
----TGTCTAGACA
C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACATAGTCTTGA--
----TGTCTAGACG
C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ACATAGTCTTGA
---TWGTCTGV-
C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACATAGTCTTGA
GATACAAAGTATC--
A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:ACATAGTCTTGA---
---NHGTCGTGAYDN
C G T A A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C