Information for 3-ACTCTTCGCA (Motif 15)

C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C T G C G T A C G T A A C T G C G T A A C T G A C G T
p-value:1e-3
log p-value:-8.295e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background144.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACTCTTCGCA--
-TACTTGGCAGA
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACTCTTCGCA--
--NNTTGGCANN
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTCTTCGCA
--GCTTCC--
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACTCTTCGCA--
--NNTTCCCANN
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

ZNF652/MA1657.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ACTCTTCGCA
NTTAACTCTTTN--
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A
C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTCTTCGCA--
--HTTTCCCASG
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------ACTCTTCGCA-
TACGAGACTCCTCTAAC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACTCTTCGCA-
---CTTGGCAA
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACTCTTCGCA----
----TTMACACCTT
C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

SOX14/MA1562.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-ACTCTTCGCA
CATTGTTCGG-
A C G T C G T A A G T C A C G T A G T C A C G T A C G T A G T C A C T G A G T C C G T A
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G A C G T