| p-value: | 1e-3 |
| log p-value: | -7.118e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 19.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 14.0 +/- 0.0bp |
| Average Position of motif in Background | 95.3 +/- 81.7bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HMBOX1/MA0895.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCCTTAGTTA-- --ACTAGTTAAC |
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PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCCTTAGTTA---- TACCCTAGTTACCGA |
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|
PB0081.1_Tcf1_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCCTTAGTTA------- NNNTTAGTTAACTNANN |
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|
PH0167.1_Tcf1/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCCTTAGTTA------- NTTTTAGTTAACNNAGN |
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|
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCCTTAGTTA BCMATTAG--- |
|
|
|
PH0055.1_Hoxa7_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCCTTAGTTA---- TNCCATTAATTACTNC |
|
|
|
PB0158.1_Rfx3_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CCCTTAGTTA-------- ACTGACCCTTGGTTACCACAAAG |
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|
|
PH0168.1_Hnf1b/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCCTTAGTTA------ ANNNCTAGTTAACNGNN |
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|
|
LMX1A/MA0702.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CCCTTAGTTA- ---TTAATTAA |
|
|
|
SOX4/MA0867.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCCTTAGTTA NCCTTTGTTC |
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