Information for 22-ACTGATAGATAT (Motif 21)

C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A G T C A C G T C G T A A C G T A G T C C G T A A C T G A C G T
p-value:1e-3
log p-value:-8.830e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background129.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACTGATAGATAT
--TGATKGATGR
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T
A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

PB0144.1_Lef1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTGATAGATAT--
NNANTGATTGATNTTN
A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTGATAGATAT--
NNANTGATTGATNNNN
A C G T A C G T C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACTGATAGATAT
-NTNATCGATA-
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T
A C G T G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACTGATAGATAT
TTTGATTGATGN
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACTGATAGATAT
--TAATCGATAA
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTGATAGATAT-
NNTGATTGATGNN
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ACTGATAGATAT
--TAATCGATAA
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTGATAGATAT----
-NAGATWNBNATCTNN
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACTGATAGATAT-
-RTGATTKATRGN
C G T A A G T C A C G T A C T G C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C G T
A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C