Information for 23-GTCTCTCATC (Motif 33)

A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C T G C G T A A G T C
p-value:1e-2
log p-value:-6.538e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif58.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background92.2 +/- 127.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTCATC-
CTGTCTGTCACCT
A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCATC-
TGTCTGDCACCT
A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PKNOX1/MA0782.2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GTCTCTCATC
NNGCTGTCACTCANN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GTCTCTCATC-
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTCATC
AGGTCTCTAACC
A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCTCTCATC
NCTGTCAATCAN-
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

GATA6/MA1104.2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCTCTCATC---
TTATCTTATCTTT
A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T
G C A T G C A T G C T A A G C T A T G C G C A T G C A T C G T A G C A T G A T C G C A T G A C T G C A T

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTCTCTCATC--------
NNTNANTTCTTATCTCTANANN
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCTCTCATC
GSCTGTCACTCA--
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTCTCTCATC
SCTGTCAVTCAV-
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C G T A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T