Information for 3-CTGGGCTGCC (Motif 3)

A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C T G A G T C A G T C G T A C G T C A A C T G
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.870
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif8.00%
Number of Background Sequences with motif211.9
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets116.6 +/- 60.8bp
Average Position of motif in Background98.0 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCTGCC
WDNCTGGGCA---
A C G T A C G T A C G T A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTGGGCTGCC
---NGCTN--
A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGGGCTGCC-
---VGCTGGCA
A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C A C G T
A C G T A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGGCTGCC
-TWGTCTGV-
A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGCTGCC
GAATTCTTGGTTGAC
A C G T A C G T A C G T A C G T A C G T A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
T C A G C G T A T C G A C G A T A G C T G A T C A G C T C A G T C T A G C T A G G A C T C A G T C T A G C T G A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGGGCTGCC
----GCTGTG
A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZNF449/MA1656.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGCTGCC
NNGGTTGGGCTTNN
A C G T A C G T A C G T A C G T A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGGGCTGCC---
---TGCTGACTCA
A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGGGCTGCC---
---VGCTGWCAVB
A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

SREBF2/MA0596.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGGGCTGCC
ATGGGGTGAT
A G T C C A G T A C T G C T A G A C T G A G T C A C G T A C T G T G A C A G T C
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T