Information for 3-TAAGTGCTATCT (Motif 3)

A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C G T A C G T C G T A
p-value:1e-15
log p-value:-3.675e+01
Information Content per bp:1.955
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.6 +/- 42.8bp
Average Position of motif in Background94.6 +/- 0.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGCTATCT
TTAAGTGGT----
A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAAGTGCTATCT
NTTAAGTGGTTNN-
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGCTATCT
TTAAGTGC-----
A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAAGTGCTATCT
TTAAGTGCTT---
A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TAAGTGCTATCT-----
NNNCTGATATCTCNNNN
A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAAGTGCTATCT
NTCAAGTGGN----
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TAAGTGCTATCT
TTRAGTGSYK---
A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGCTATCT
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TAAGTGCTATCT
----YSTTATCT
A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TAAGTGCTATCT
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G T A G C A C G T C G T A A C G T A G T C A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G