Information for 21-AAAGCTGAAAAG (Motif 28)

C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.090e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.0 +/- 0.0bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAGCTGAAAAG-----
TAAACTGATAAGAAGAT
C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

TCF7L1/MA1421.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGCTGAAAAG
AAAGATCAAAGG
C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G
G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAGCTGAAAAG----
AAAGGTCAAAAGGTCA
C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

SIX1/MA1118.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTGAAAAG
GTAACCTGATA--
A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAGCTGAAAAG---
AAAGATCAAAGGGTT
C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T
T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTGAAAAG
AACAGCTG-----
A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTGAAAAG
AGAAACAGAAACT
A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGCTGAAAAG
-AAGGTGTKAA-
C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAGCTGAAAAG
AAAGRGGAAGTG
C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTGAAAAG---
AGGACGCTGTAAAGGGA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A