Information for 12-TTAAAKGGTT (Motif 31)

C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T
Reverse Opposite:
C G T A C G T A A T G C T A G C G T C A A C G T A C G T C G A T C G T A C G T A
p-value:1e-3
log p-value:-7.410e+00
Information Content per bp:1.773
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif278.3
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets130.0 +/- 30.7bp
Average Position of motif in Background101.0 +/- 89.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTAAAKGGTT
GCTAAACGGT-
A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTAAAKGGTT---
NNNTTAATTGGTTTTT
A C G T A C G T A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTAAAKGGTT---
GNNTTAATTGGTTGTT
A C G T A C G T A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTAAAKGGTT---
NNNTTAATTGGTTTTN
A C G T A C G T A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

ZNF652/MA1657.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTAAAKGGTT---
-GAAAGAGTTAAA
C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAKGGTT---
NNATNAATTGTTTNN
A C G T A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PH0088.1_Isl2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTAAAKGGTT---
AAATTAATTGATTTNG
A C G T A C G T A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTAAAKGGTT--
NMMNBAAAGGGTTAA
A C G T A C G T A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

BARX2/MA1471.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTAAAKGGTT---
-NTAATGGTTTTN
C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTAAAKGGTT--
NTTAAGTGGTTNN
A C G T C G A T A C G T C G T A G T C A C G T A C A G T A T C G T A C G A C G T A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T