Information for 11-AAACATTGTATG (Motif 18)

C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.405e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background146.3 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAACATTGTATG-----
--CCATTGTATGCAAAT
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Dmrt1/MA1603.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAACATTGTATG
GNTACTTTGTATC
A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAACATTGTATG
NNCCATTGTNN-
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAACATTGTATG--
GHTACAWTGTADCHR
A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAACATTGTATG
NNCCATTGTNN-
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AAACATTGTATG
TWGHWACAWTGTWDC
A C G T A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAACATTGTATG--
NNNCCATTGTGTNAN
A C G T C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAACATTGTATG
--CCATTGTTYB
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAACATTGTATG
-CTCATTGTC--
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAACATTGTATG-
---CATTGTTCGG
C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G