Information for 20-TGACTATGATTA (Motif 19)

A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A
p-value:1e-4
log p-value:-9.787e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background135.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGACTATGATTA-
-----RGGATTAR
A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

EVX2/MA0888.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGACTATGATTA--
----GGTAATTAGC
A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

PH0017.1_Cux1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGACTATGATTA
TAGTGATCATCATTA
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

HOXB4/MA1499.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGACTATGATTA-
-----ATCATTAG
A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G

EVX1/MA0887.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGACTATGATTA--
----GGTAATTAGC
A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C

PB0064.1_Sox14_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGACTATGATTA--
NNTAATTATAATTNNN
A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGACTATGATTA------
--ACNNTAATTACNNCAN
A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGACTATGATTA
NATGACCTTGA---
A C G T A C G T A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGACTATGATTA-
-----ATCATTAG
A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGACTATGATTA-
-----TTGATTGN
A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G