Information for 25-GGACTGCCCC (Motif 34)

A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C T A G A G T C C G T A A C T G A C G T A G T C A G T C
p-value:1e-1
log p-value:-3.784e+00
Information Content per bp:1.976
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets111.3 +/- 49.2bp
Average Position of motif in Background122.5 +/- 51.8bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGACTGCCCC
GGGGATTCCCCC
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGACTGCCCC
GGAAANCCCC
A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGACTGCCCC-
GGGAAATCCCCN
A C G T A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGACTGCCCC-
TGGAATGTACCA
A C G T A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGACTGCCCC
GGAAATCCCC
A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGACTGCCCC-----
GGGTGTGCCCAAAAGG
A C G T A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGACTGCCCC--
---CTGCCCGCA
A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGACTGCCCC-----
ATCCCCGCCCCTAAAA
A C G T A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGACTGCCCC-
AGGGGATTCCCCT
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGACTGCCCC-
GGCCCCGCCCCC
A C G T A C T G A C T G C G T A A G T C A C G T A C T G A G T C A G T C A G T C A G T C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C