Information for 24-ACTGCAGTCA (Motif 42)

G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
Reverse Opposite:
G C A T T A C G C T G A A G T C A G C T A C T G A T G C C G T A A C T G A C G T
p-value:1e-1
log p-value:-3.975e+00
Information Content per bp:1.796
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif384.8
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets98.4 +/- 55.2bp
Average Position of motif in Background98.9 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)2.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.76
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAGTCA-
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF317/MA1593.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCAGTCA
NNTCTGCTGTNA
A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCAGTCA
NNCCTGCTGNG-
A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAGTCA-
CCCCCTGCTGTGNN
A C G T A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAGTCA
CCCCCTGCTGTG-
A C G T A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTGCAGTCA
AACAGCTGTC-
A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
T C G A T C G A A G T C C G T A A C T G G T A C A C G T A C T G G A C T A G T C A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------ACTGCAGTCA
CGACCAACTGCCGTG-
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----ACTGCAGTCA
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

TGIF1/MA0796.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTGCAGTCA
TGACAGCTGTCA
A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACTGCAGTCA--
TNTCCTGCTGTGNNG
A C G T A C G T A C G T G T C A A G T C A C G T A T C G A G T C C T G A A C T G A G C T A T G C C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G