Information for 11-AAGAGATTAGCT (Motif 14)

C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T A G T C A C G T A C G T
p-value:1e-3
log p-value:-9.045e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif77.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets22.0 +/- 16.0bp
Average Position of motif in Background97.8 +/- 76.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AAGAGATTAGCT
-NNAGATTAGAN
C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

DPRX/MA1480.1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AAGAGATTAGCT
--NGGATTATCT
C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
A C G T A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAGAGATTAGCT
-NNGGATTAGN-
C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AAGAGATTAGCT
---GGATTAGC-
C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGAGATTAGCT
AAGAGGATTAG--
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAGAGATTAGCT
--RGGATTAR--
C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAGAGATTAGCT
-VRGGATTARN-
C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGATTAGCT---
NNAAGGGATTAACGANT
A C G T A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGAGATTAGCT---
AGGGGGATTAGCTGCC
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0125.1_Obox5_2/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGATTAGCT---
NANAGGGATTAATTATN
A C G T A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C