Information for 12-AGCAAACG (Motif 41)

G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G
Reverse Opposite:
A G T C A T C G C G A T C G A T A G C T A T C G G T A C A C G T
p-value:1e-1
log p-value:-3.456e+00
Information Content per bp:1.772
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.15%
Number of Background Sequences with motif1443.1
Percentage of Background Sequences with motif3.01%
Average Position of motif in Targets104.0 +/- 61.2bp
Average Position of motif in Background99.5 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAACG---
NCGCGGACGTTG
A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T A C G T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

BARHL1/MA0877.2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCAAACG-
-CTAAACGG
G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T
A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCAAACG----
NNTTTGCACACGGCCC
A C G T A C G T A C G T A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

MYBL1/MA0776.1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAACG--
ACCGTTAACGGT
A C G T A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------AGCAAACG-
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAACG-------
NNTAAAAACGATGTTNT
A C G T A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AGCAAACG-
GAAAGTGAAAGT
A C G T A C G T A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGCAAACG--
GCTAAACGGT
G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

PRDM1/MA0508.3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAACG--
NAGAGAAAGNA
A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G A C G T A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCAAACG
CAGCC----
A C G T G T C A A C T G T A G C C T G A C G T A G C T A T A G C A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T