| p-value: | 1e-3 |
| log p-value: | -6.917e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 15.5 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 35.0 +/- 0.0bp |
| Average Position of motif in Background | 80.2 +/- 56.3bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CATCTAGGTC- -AAYTAGGTCA |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 2 |
| Score: | 0.77 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CATCTAGGTC- -AAYTAGGTCA |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.76 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CATCTAGGTC- -ATCAAGGTCA |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CATCTAGGTC- ATAAGTAGGTCA |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 5 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CATCTAGGTC----- AAWCTAGGTCARDNN |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CATCTAGGTC-- TATAAGTAGGTCAA |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CATCTAGGTC-- -AATTAGGTCAC |
|
|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CATCTAGGTC-- WAABTAGGTCAV |
|
|
|
ESRRB/MA0141.3/Jaspar
| Match Rank: | 9 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CATCTAGGTC--- --TCAAGGTCATA |
|
|
|
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CATCTAGGTC-- --TCAAGGTCAN |
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|
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