Information for 19-GTAAAAGTTTTA (Motif 25)

T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A
Reverse Opposite:
C G A T C G T A C G T A C G T A C G T A T G A C A C G T C G A T A C G T A C G T C G T A A T G C
p-value:1e-7
log p-value:-1.643e+01
Information Content per bp:1.889
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif55.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets95.9 +/- 45.8bp
Average Position of motif in Background99.7 +/- 45.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARX2/MA1471.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAAAAGTTTTA
NTAATGGTTTTN
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A
A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAAAAGTTTTA
NTAATKGTTT--
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GTAAAAGTTTTA
TTCAAAWTAAAAGTC---
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTAAAAGTTTTA-------
--NTNAATTTTATTGNATT
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTAAAAGTTTTA
GGTTAAACATTAA
A C G T T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GTAAAAGTTTTA-------
---NNANTTTTATTGGNNN
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GTAAAAGTTTTA----
------NTTTTATDRG
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTAAAAGTTTTA-----
-----DGWTTTATGRCN
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GTAAAAGTTTTA-----
-------TTTTATTRGN
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

PB0165.1_Sox11_2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTAAAAGTTTTA----
--AAAATTGTTATGAA
T A C G A C G T G T C A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A