Information for 4-CCCTAGGCGG (Motif 20)

A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A G T C A G T C A C G T C G T A A C T G A C T G A C T G
p-value:1e-3
log p-value:-8.221e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background105.7 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCTAGGCGG---
CTCCCTGGGAGGCCN
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

TFAP2E/MA1569.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAGGCGG
NGCCTGAGGCN-
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G
G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCTAGGCGG
AGCCTCAGGCA-
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

Znf423/MA0116.1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCCTAGGCGG-
GCACCCCTGGGTGCC
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCTAGGCGG-
GGGCCTGAGGCGGG
A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCTAGGCGG-
ATTGCCTGAGGCAAT
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCCTAGGCGG
WTGSCCTSAGGS--
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCCTAGGCGG----
--BTKGGCGGGAAA
A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCCTAGGCGG-
ATTGCCTGAGGCGAA
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCTAGGCGG-
ATTCCCTGAGGGGAA
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C T G A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A