Information for 11-SYAAAMWTRMTT (Motif 15)

A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T C T A G A T G C
p-value:1e-5
log p-value:-1.270e+01
Information Content per bp:1.818
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif63.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets111.3 +/- 39.6bp
Average Position of motif in Background108.2 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.4/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--SYAAAMWTRMTT
ATGTAAACATGT--
A C G T A C G T A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:SYAAAMWTRMTT-
---TAATTGATTA
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Lhx3/MA0135.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:SYAAAMWTRMTT----
---AAATTAATTAATC
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PH0094.1_Lhx4/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:SYAAAMWTRMTT------
-CAAAGCTAATTAGNTTN
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SYAAAMWTRMTT-
-NTAATBNAATTA
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T A C G T
A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:SYAAAMWTRMTT
-----AATAATT
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

FOXD1/MA0031.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:SYAAAMWTRMTT
GTAAACAT----
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T
A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SYAAAMWTRMTT-
--TAATTTAATTA
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:SYAAAMWTRMTT
GTAAACAA----
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T
C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:SYAAAMWTRMTT---
CCATAATTAATTACA
A T C G A G T C C G T A C G T A C G T A G T A C C G A T A C G T C T A G G T C A A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A