Information for 18-AAATCATGAGTA (Motif 20)

C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.045e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX6/MA0069.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAATCATGAGTA--
AANTCATGCGTGAA
C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAATCATGAGTA
--ATAATGAGGT
C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PB0176.1_Sox5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAATCATGAGTA
NNCTNAATTATGANN-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A A C G T

BACH2/MA1101.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAATCATGAGTA-------
AAAGCATGACTCATCATTT
C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A T C G G T A C T C G A A G C T C A T G T G C A T A G C A C G T G T A C T C G A A G C T A T G C T C G A G C A T G C A T G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAATCATGAGTA---
AAACATAATGAGGTTGC
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

BARX2/MA1471.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAATCATGAGTA
AAAAACCATTAC--
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AAATCATGAGTA
NNCCATAAATCATNN---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T A C G T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAATCATGAGTA
GTCATAAATCATT----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AAATCATGAGTA
AAGGCGAAATCATCGCA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAATCATGAGTA
GCAAAACATTACTA
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G A C G T C G T A
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A