Information for 7-ACGTGTRTTA (Motif 11)

C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A
Reverse Opposite:
G A C T C G T A C T G A A G T C G T C A A G T C C G T A A G T C A C T G A C G T
p-value:1e-7
log p-value:-1.724e+01
Information Content per bp:1.771
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif84.8
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets89.8 +/- 39.8bp
Average Position of motif in Background98.8 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-ACGTGTRTTA
CACGTGTGCH-
A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A
A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---ACGTGTRTTA
GGCACGTGTC---
A C G T A C G T A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACGTGTRTTA
GCACGTGT----
A C G T A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----ACGTGTRTTA--
AAAATACATGTAATACT
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

Arnt/MA0004.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-ACGTGTRTTA
CACGTG-----
A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----ACGTGTRTTA--
AATATACATGTAATATA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----ACGTGTRTTA--
AATATACATGTAAAATT
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------ACGTGTRTTA-
ANTNTTACATGTATNTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACGTGTRTTA
CACGTGBN---
A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A
G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACGTGTRTTA
GCCACGTGT----
A C G T A C G T A C G T C G T A A G T C C T A G C G A T C T A G A C G T C T A G A G C T C G A T C G T A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T