Information for 9-GGTGTGTA (Motif 29)

A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A
Reverse Opposite:
G A C T C T G A A T G C G T C A A G T C G T C A G T A C T G A C
p-value:1e-3
log p-value:-7.296e+00
Information Content per bp:1.795
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif566.4
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets99.8 +/- 50.7bp
Average Position of motif in Background101.0 +/- 68.6bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX20/MA0689.1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGTA-
TAGGTGTGAAG
A C G T A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A A C G T
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGTA
AAGGTGTGAA
A C G T A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GGTGTGTA----
GAAAAGGTGTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A A C G T A C G T A C G T A C G T
A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX18/MA1565.1/Jaspar

Match Rank:4
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGTGTGTA-
GGAGGTGTGAAA
A C G T A C G T A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A A C G T
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGTA-
AGGTGTGAAA
A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A A C G T
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGTGTGTA-
GGGGGTGTGTCC
A C G T A C G T A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A A C G T
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGTA---
AAGGTGTGAAAAT
A C G T A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGTA-
AGGTGTGAAA
A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A A C G T
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A

TBX3/MA1566.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGTGTGTA
GAGGTGTGAA
A C G T A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGTGTGTA
AGGTGTGA-
A C G T A C T G C A T G A C G T T C A G C A G T A T C G G A C T C T G A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T