Information for 14-GCCTCAGTGTCT (Motif 25)

A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.960e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background133.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGTGTCT
NNCGCCTCAGGCNN-
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCTCAGTGTCT
ATTGCCTCAGGCCA-
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCTCAGTGTCT
GCCTCAGGGCAT
A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCTCAGTGTCT
--CTCATTGTC-
A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCTCAGTGTCT
-CTTGAGTGGCT
A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCAGTGTCT
NTNGCCTCAGGCNNN
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCCTCAGTGTCT
SCCTSAGGSCAW
A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCAGTGTCT
KGGCCYCWTD----
A C G T A C G T A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCCTCAGTGTCT
--TTAAGTGCTT
A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCCTCAGTGTCT
--TTRAGTGSYK
A C T G A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T