| p-value: | 1e-4 |
| log p-value: | -1.137e+01 |
| Information Content per bp: | 1.783 |
| Number of Target Sequences with motif | 12.0 |
| Percentage of Target Sequences with motif | 1.28% |
| Number of Background Sequences with motif | 125.7 |
| Percentage of Background Sequences with motif | 0.27% |
| Average Position of motif in Targets | 82.8 +/- 52.3bp |
| Average Position of motif in Background | 95.2 +/- 60.2bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.25 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGTCTAACAC-- TGTCTGDCACCT |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGTCTAACAC-- CTGTCTGTCACCT |
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|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCTAACAC CGAGGTCAC---- |
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|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGTCTAACAC AGGTCA----- |
|
|
|
NR2F1(var.3)/MA1538.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCTAACAC--- AAGGTCANTGACCTT |
|
|
|
NR4A2::RXRA/MA1147.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCTAACAC--- GGGGTCAATGACCTN |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCTAACAC GAGGTCAT---- |
|
|
|
NR2F6(var.3)/MA1539.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCTAACAC--- AAGGTCANTGACCTT |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCTAACAC AGRGGTCA----- |
|
|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------GGTCTAACAC NRBCARRGGTCA----- |
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