Information for 11-GACAGTCGGA (Motif 25)

A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C T G C G T A A G T C A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-7.608e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background48.4 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GACAGTCGGA--
CACGGCAGTTGGTNN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GACAGTCGGA
TGGCAGTTGG-
A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T

MYB/MA0100.3/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACAGTCGGA
NNCAGTTGNN
A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GACAGTCGGA--
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GACAGTCGGA-
-ATAGTAGGTG
A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A A C G T
A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GACAGTCGGA
TTGACAG-----
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACAGTCGGA
TTGACAGG----
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GACAGTCGGA
TTGACAGC----
A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GACAGTCGGA---
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

NEUROD1/MA1109.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GACAGTCGGA--
GGACAGATGGCAG
A C G T A C T G C G T A A G T C C G T A A C T G A C G T A G T C A C T G A C T G C G T A A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G