Information for 16-GGGGCCATGC (Motif 33)

A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C T G A C T G A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-6.990e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background86.8 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----GGGGCCATGC
CCCTGGGGCCAGG-
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCCATGC
NGGGGGCCCN--
A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C
C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGGGCCATGC
HAWGRGGCCM---
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCATGC--
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCCATGC--
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PAX5/MA0014.3/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGGCCATGC--
NNGGTCACGCTC
A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGGCCATGC-----
-GTGCCACGCGACTG
A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGGGCCATGC-
NNNNTTGGCGCCGANNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGGCCATGC
AGRGGTCA---
A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCATGC-
AGAGCGGGGTCAAGTA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A