Information for 10-GCTGTATTGC (Motif 29)

A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C G T C G T A A G T C C G T A A C T G A G T C
p-value:1e-3
log p-value:-6.962e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif16.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background54.5 +/- 74.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCTGTATTGC--
NTTTTATTGCNN
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T A C G T
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTATTGC--
AGGACGCTGTAAAGGGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTATTGC--
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTATTGC--
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

HOXD13/MA0909.2/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTGTATTGC-
GTTTTATTGGG
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T
A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

CDX4/MA1473.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTGTATTGC-
GTTTTATTGCC
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C

CDX1/MA0878.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCTGTATTGC-
GTTTTATGGCC
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

HOXD9/MA0913.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTGTATTGC
NTTTTATTGC
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTGTATTGC----
--GGGATTGCATNN
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

HOXA13/MA0650.2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTGTATTGC-
GTTTTATTGGN
A C T G A G T C A C G T A C T G A C G T C G T A A C G T A C G T A C T G A G T C A C G T
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G