Information for 21-TGAACACTTAAT (Motif 29)

A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.918e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-2/MA0122.3/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGAACACTTAAT
ATAACCACTTAAA
A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TGAACACTTAAT
--ACCACTTAA-
A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGAACACTTAAT---
CATAACCACTTAACAAC
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGAACACTTAAT
-AAGCACTTAA-
A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TGAACACTTAAT
---GCACTTAA-
A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGAACACTTAAT---
ATGCATAATTAATGAG
A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGAACACTTAAT-
ATGAATAATTAATG
A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGAACACTTAAT---
ATGCATAATTAATGAG
A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGAACACTTAAT--
ATAAACAATTAAACA
A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGAACACTTAAT---
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T