Information for 7-CTGGGGCTAAAT (Motif 9)

A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T C G A T A C G T C G T A A C T G A G T C A G T C A G T C A G T C C G T A A C T G
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.942
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.8 +/- 52.4bp
Average Position of motif in Background147.4 +/- 43.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)4.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTGGGGCTAAAT
CCCTGGGGCCAGG-
A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGGCTAAAT
ATTGCCTGAGGCAAT--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T

TFAP2A/MA0003.4/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGGCTAAAT
NNGCCTGAGGCANN--
A C G T A C G T A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGGCTAAAT
TGCCTGAGGCN----
A C G T A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CTGGGGCTAAAT
ATTGCCTGAGGCGAA--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGGGGCTAAAT
HAWGRGGCCM---
A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTGGGGCTAAAT
GGGCCTGAGGCGGG--
A C G T A C G T A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTGGGGCTAAAT
ANTGCCTGAGGCAAN--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGGGGCTAAAT
SCCTSAGGSCAW--
A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T

E2F4/MA0470.2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGGCTAAAT
NAATGGCGCCAAAA
A C G T A C G T A G T C A C G T C T A G C T A G A C T G A C T G A G T C C G A T C G T A C G T A C G T A A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A