Information for 20-GAAAAGGTCACC (Motif 26)

A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.932e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0053.1_Rara_1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGGTCACC--
TCTCAAAGGTCACCTG
A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--GAAAAGGTCACC
ANGNAAAGGTCA--
A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GAAAAGGTCACC
TTAAAGGTCAAA
A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGGTCACC--
TCTCAAAGGTCACGAG
A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.78
Offset:3
Orientation:forward strand
Alignment:GAAAAGGTCACC
---AAGGTCAC-
A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GAAAAGGTCACC
-CAAAGGTCAAA
A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GAAAAGGTCACC
NBYCAAGGTCAC-
A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GAAAAGGTCACC--
-CAAAGGTCAAGGG
A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GAAAAGGTCACC
-TCAAGGTCAN-
A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GAAAAGGTCACC
GKBCARAGGTCA--
A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A G T C A G T C
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T