Information for 22-CGTTCCGATGGG (Motif 31)

A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C G T A G T C A C T G A C T G C G T A C G T A A G T C A C T G
p-value:1e-1
log p-value:-4.097e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGTTCCGATGGG-
CGGTTGCTATGGCA
A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGTTCCGATGGG-
NNCGTTGCTATGGNN
A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

RFX1/MA0509.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGTTCCGATGGG-
CTGTTGCTATGGCA
A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGTTCCGATGGG-
NCCGTTGCTANGNGN
A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Ebf2/MA1604.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGTTCCGATGGG--
-NNTCCCTTGGGAN
A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C G T C T G A A C T G A G C T G A T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

EBF3/MA1637.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGTTCCGATGGG--
-NNTCCCTTGGGAN
A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C G T C G T A A C G T A G C T A G T C G A T C A G T C G A C T C A G T C T A G C T A G A T C G T C G A T G C A

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CGTTCCGATGGG-----
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGTTCCGATGGG--
NGTTGCCATGGCAA
A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGTTCCGATGGG--
NCGACCGCTCCGCTCGAAA
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

RFX2/MA0600.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGTTCCGATGGG----
CGTTGCCATGGCAACG
A G T C A C T G A C G T A C G T A G T C A G T C A C T G C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A T G C T C A G G A C T G C A T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C G T A C T G A G A T C T A C G