Information for 18-CCCGAGCAGGGG (Motif 24)

A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C G T A C T G A G T C A G C T G T A C A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.482e+01
Information Content per bp:1.949
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets119.3 +/- 65.5bp
Average Position of motif in Background29.1 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCCGAGCAGGGG-
-CACAGCAGGGGG
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCGAGCAGGGG-
-CHCAGCRGGRGG
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T
A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCCGAGCAGGGG---
DCHCAGCAGGRGGCC
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCCGAGCAGGGG-
CTCACAGCAGGGGG
A C G T A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCCGAGCAGGGG
-CACAGCAGGGG
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G
A C G T T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCCGAGCAGGGG--
---NNGCAGGTGNN
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

MAZ/MA1522.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCGAGCAGGGG--
---GGGGAGGGGNN
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCGAGCAGGGG---
---SDGCAGGTGCNS
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF3/MA0522.3/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCCGAGCAGGGG--
---NNGCAGGTGNN
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCGAGCAGGGG---
--NNGGCAGGTGCNN
A G T C A G T C A G T C A C T G C T G A A C T G A G T C C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G