Information for 19-AGGGCTCTGAAA (Motif 32)

C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C T G A G T C A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background118.0 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGGCTCTGAAA
--GGCMATGAAA
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A
A C G T A C G T C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGGCTCTGAAA
--GGYAATGAAA
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A
A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:AGGGCTCTGAAA---
-----ACTGAAACCA
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGGCTCTGAAA-
-HDGYAATGAAAN
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A A C G T
A C G T G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGGCTCTGAAA
AGGTCTCTAACC
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGGGCTCTGAAA
CGAACAGTGCTCACTAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGGGCTCTGAAA
--VGCCATAAAA
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A
A C G T A C G T T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGGGCTCTGAAA--
--GNCTATAAAAGG
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGGGCTCTGAAA
--KGCCATAAAA
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A
A C G T A C G T C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGGCTCTGAAA--
--GGAAGTGAAAST
C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T