Information for 15-CACACTTATATG (Motif 20)

A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C T G
p-value:1e-4
log p-value:-1.053e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-2/MA0122.3/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CACACTTATATG
ATAACCACTTAAA--
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T A C G T

TBXT/MA0009.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACACTTATATG---
TCACACCTAGGTGTGA
A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A

TBX19/MA0804.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACACTTATATG-----
TTTCACACCTAGGTGTGAAN
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T G A C T T G A C C T G A G A T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T T C A G G A C T A C T G C T G A G T C A G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACACTTATATG
ACCACTTAA---
A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CACACTTATATG
-GCACTTAA---
A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACACTTATATG
ACCACTTGAA--
A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACACTTATATG
TCACACCT-----
A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACACTTATATG
TCACACCT-----
A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CACACTTATATG
CTTCACACCTA----
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACACTTATATG
--NCCTTATCTG
A G T C C G T A A G T C C G T A A G T C A C G T A C G T C G T A A C G T C G T A A C G T A C T G
A C G T A C G T A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G