Information for 19-GCTTTATATTGG (Motif 21)

A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T C G T A A C G T C G T A C G T A C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATATTGG---
NNAATTTTATTGGNTN
A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTTTATATTGG--
NNATTTTATTGGNN
A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

HOXA13/MA0650.2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GCTTTATATTGG-
--GTTTTATTGGN
A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A C G T C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTTTATATTGG---
NNANTTTTATTGGNNN
A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCTTTATATTGG-
---TTTTATKRGG
A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCTTTATATTGG-
---TTTTATTRGN
A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

HOXD13/MA0909.2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTTTATATTGG-
--GTTTTATTGGG
A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTTTATATTGG--
NNTGTTTATTTTGGCA
A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTTTATATTGG
-CCATATATGG-
A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTTTATATTGG
NNNNNNCTTTTATAN-
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T