Information for 9-AATGTTACAGCG (Motif 11)

C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C T G A C G T C G T A C G T A A G T C C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.019e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets181.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATGTTACAGCG----
TCNCTTTACAGCGNNNT
A C G T C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATGTTACAGCG----
TCNNTTTACAGCGNNNT
A C G T C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATGTTACAGCG----
TCNNTTTACAGCGNNNT
A C G T C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

DMRTA2/MA1478.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AATGTTACAGCG
AATTGTTACATT-
A C G T C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATGTTACAGCG
NTTGATACATT-
C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATGTTACAGCG
AATTGATACATT-
A C G T C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATGTTACAGCG
AGGGTAACAGC-
C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C A C G T

ZBTB12/MA1649.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AATGTTACAGCG
-NNGTTCCAGNN
C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
A C G T T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AATGTTACAGCG
ATTGTTA-----
C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AATGTTACAGCG
-----CACAGN-
C G T A C G T A A C G T A C T G A C G T A C G T C G T A A G T C C G T A A C T G A G T C A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T