Information for 1-WTAWRWSAGASC (Motif 1)

C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A G T C A C G T A T G C C G T A A G T C C G A T A C G T C G T A C G A T
p-value:1e-6
log p-value:-1.517e+01
Information Content per bp:1.818
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif100.9
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets81.7 +/- 78.4bp
Average Position of motif in Background107.9 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WTAWRWSAGASC-----
ATAAATGACACCTATCA
C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:WTAWRWSAGASC
--ATGCCAGACN
C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:WTAWRWSAGASC-----
ANANNTGATACCCNATN
C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PBX2/MA1113.2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---WTAWRWSAGASC
GTCATAAATCATT--
A C G T A C G T A C G T C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:WTAWRWSAGASC-----
ANANNTGATACCCTATN
C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:WTAWRWSAGASC-----
ANANGTGATACCCCATT
C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

PB0184.1_Tbp_2/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---WTAWRWSAGASC
CCGATTTAAGCGACC
A C G T A C G T A C G T C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--WTAWRWSAGASC
AAATAAGAAAAAAC
A C G T A C G T C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:WTAWRWSAGASC
------CGGAGC
C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:WTAWRWSAGASC-----
ANANGTGATACCCTATN
C G T A A C G T C G T A C G T A C T A G C G A T A T C G C G T A A C T G C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C