Information for 1-TGACATGAAC (Motif 4)

A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
Reverse Opposite:
A C T G A C G T G C A T G T A C C G T A C G A T A T C G A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.613e+01
Information Content per bp:1.802
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif314.2
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets39.0 +/- 18.8bp
Average Position of motif in Background99.7 +/- 85.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TGACATGAAC
TTGACAG----
A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-TGACATGAAC
TTGACAGG---
A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGACATGAAC
ARNTGACA-----
A C G T A C G T A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGACATGAAC
TTGACAGC---
A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGACATGAAC
RHTGWCAR----
A C G T A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGACATGAAC
TGACGT----
A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGACATGAAC
TTGACTTTT--
A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGACATGAAC
NCGTGACN-----
A C G T A C G T A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

CREB1/MA0018.4/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGACATGAAC-
NATGACATCANNN
A C G T A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C A C G T
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

PH0085.1_Irx4/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGACATGAAC---
NNTTTTACATGTANNNT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C C G T A C G A T C A T G C G T A C G T A T G A C A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T