Information for 7-AACAAGACGG (Motif 14)

C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C G T
p-value:1e-3
log p-value:-8.529e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background121.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AACAAGACGG
--CCAGACAG
C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AACAAGACGG----
--CAAGATGGCGGC
C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AACAAGACGG--
--CCAGACRSVB
C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACAAGACGG
AACAAT----
C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AACAAGACGG
ATGTCACAACAACAC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACAAGACGG----
CAAATCCAGACATCACA
A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AACAAGACGG
GCAAAACATTACTA
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

Foxo1/MA0480.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AACAAGACGG
TGTAAACAGGA---
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AACAAGACGG
GTAAACAAT----
A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AACAAGACGG-
CAAGATGGCGGC
A C G T C G T A C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C T G A C T G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C