Information for 20-WCACATGTTA (Motif 32)

G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A
Reverse Opposite:
C A G T C T G A C G T A A G T C T C G A A C G T C A T G G C A T A T C G C G T A
p-value:1e-5
log p-value:-1.291e+01
Information Content per bp:1.604
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif99.3
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets98.1 +/- 30.2bp
Average Position of motif in Background91.8 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-WCACATGTTA
GACACATGGC-
A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

TFAP4(var.2)/MA1570.1/Jaspar

Match Rank:2
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-WCACATGTTA
AACATATGTT-
A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A
T C G A G T C A A T G C C G T A A G C T T C G A A G C T A C T G C A G T A G C T A C G T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:WCACATGTTA-
-CACGTGTGCH
G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A A C G T
A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

CLOCK/MA0819.1/Jaspar

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-WCACATGTTA
AACACGTGTT-
A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A
C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-WCACATGTTA
ACCATATGTT-
A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:6
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--WCACATGTTA-
ATGCACCTGTCAT
A C G T A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A A C G T
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---WCACATGTTA---
CNGACACCTGTTCNNN
A C G T A C G T A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:8
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-WCACATGTTA
GTCACGTGGT-
A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--WCACATGTTA
ACACACCTGTGC
A C G T A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A
T C G A T G A C T C G A T G A C C G T A A T G C T A G C A C G T A C T G A G C T A C T G G A T C

MYOD1/MA0499.2/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--WCACATGTTA-
CAGCACCTGTCCC
A C G T A C G T G C A T T A G C C G T A G T A C T G C A A G C T T C A G G C A T G A C T G T C A A C G T
A T G C C G T A T A C G T A G C C T G A A T G C T A G C A G C T A T C G A G C T A G T C G T A C A G T C