Information for 9-CTCAGACC (Motif 36)

A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C
Reverse Opposite:
C T A G C T A G A C G T A G T C A C G T A C T G C T G A A C T G
p-value:1e-3
log p-value:-7.988e+00
Information Content per bp:1.848
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif7.17%
Number of Background Sequences with motif2104.3
Percentage of Background Sequences with motif4.28%
Average Position of motif in Targets111.8 +/- 49.8bp
Average Position of motif in Background99.8 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CTCAGACC-
-CCAGACAG
A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTCAGACC---
-CCAGACRSVB
A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTCAGACC-----
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTCAGACC-
-BCAGACWA
A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGACC
ATGCCAGACN
A C G T A C G T A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGACC
TGCCCAGNHW
A C G T A C G T A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCAGACC
TCTAGACA
A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

TBX15/MA0803.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCAGACC-
-TCACACCT
A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C A C G T
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CTCAGACC-
NNCGCCTCAGGCNN
A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCAGACC-
-TCACACCT
A G T C A G C T G T A C G T C A A C T G C G T A A G T C A G T C A C G T
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T