Information for 3-TTAAGCGA (Motif 31)

A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C A C G T A C G T C G T A C G T A
p-value:1e-2
log p-value:-5.053e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif110.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets167.0 +/- 0.0bp
Average Position of motif in Background106.9 +/- 98.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TTAAGCGA----
NNTTTANNCGACGNA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTAAGCGA-
GCTAAACGGT
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTAAGCGA----
NTTAAGTGGTTNN
A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

BARHL1/MA0877.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTAAGCGA
CTAAACGG
A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTAAGCGA-
TTAAGTGGT
A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0184.1_Tbp_2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTAAGCGA--
CCGATTTAAGCGACC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T A C G T
T G A C A T G C A T C G C G T A G A C T C G A T C G A T G T C A G C T A A T C G T A G C A C T G G C T A A C G T G T A C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGCGA-----
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

HLF/MA0043.3/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTAAGCGA---
TTGTTATGCAACAA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTAAGCGA-----
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTAAGCGA
CTAATKGV
A C G T A C G T C G T A C G T A A C T G A G T C A C T G C G T A
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C