| p-value: | 1e-5 |
| log p-value: | -1.355e+01 |
| Information Content per bp: | 1.959 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.31% |
| Number of Background Sequences with motif | 1.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 94.6 +/- 21.7bp |
| Average Position of motif in Background | 97.4 +/- 11.0bp |
| Strand Bias (log2 ratio + to - strand density) | 2.6 |
| Multiplicity (# of sites on avg that occur together) | 2.33 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
POL012.1_TATA-Box/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GAATTTATATGA NNNNNNCTTTTATAN-- |
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TBP/MA0108.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GAATTTATATGA NNNNNNCTTTTATAN-- |
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PB0171.1_Sox18_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----GAATTTATATGA GGACTGAATTCATGCC- |
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PH0068.1_Hoxc13/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAATTTATATGA----- -NAATTTTACGAGNTNN |
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Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAATTTATATGA -NTTTTATDRG- |
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|
|
PB0080.1_Tbp_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GAATTTATATGA--- TCTTTATATATAAATA |
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|
Arid3b/MA0601.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GAATTTATATGA NTAATTAATAT-- |
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|
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GAATTTATATGA --TTTTATKRGG |
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|
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GAATTTATATGA --TTTTATTRGN |
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HOXC10/MA0905.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GAATTTATATGA- ---NTTTTACGAC |
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