Information for 13-CCTTCCATTCTA (Motif 29)

A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A C G T A A C G T A C T G A C T G C G T A C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.998e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background105.8 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCTTCCATTCTA-
--NNCCATTGTNN
A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A A C G T
A C G T A C G T C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTTCCATTCTA
ATTTTCCATT---
A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

NFATC4/MA1525.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCCATTCTA
ATTTTCCATN---
A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A
C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTTCCATTCTA-
--NNCCATTGTNN
A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A A C G T
A C G T A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCCATTCTA-
NNGCACCTTTCTCC
A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTTCCATTCTA
ATTTTCCATT---
A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTTCCATTCTA
ATTTTCCATT---
A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCTTCCATTCTA
-CTTCCGGT---
A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A
A C G T A G T C C G A T G A C T G A T C G T A C A C T G A T C G G A C T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCTTCCATTCTA
ACTTTCGTTTCT-
A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCCATTCTA---
NNCATTCATTCATNNN
A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T