Information for 2-ATAGAGAT (Motif 18)

C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T
Reverse Opposite:
T C G A A C G T T A G C A G C T T G A C A C G T G T C A G C A T
p-value:1e-6
log p-value:-1.563e+01
Information Content per bp:1.805
Number of Target Sequences with motif139.0
Percentage of Target Sequences with motif14.90%
Number of Background Sequences with motif4663.1
Percentage of Background Sequences with motif9.58%
Average Position of motif in Targets97.4 +/- 55.9bp
Average Position of motif in Background99.8 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATAGAGAT--
GGTTAGAGACCT
A C G T A C G T C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PB0021.1_Gata3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATAGAGAT-----------
TTTTTAGAGATAAGAAATAAAG
A C G T A C G T A C G T C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATAGAGAT--------
GACAGAGATATCAGTGT
A C G T C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATAGAGAT----
TTGACCGAGAATTCC
A C G T A C G T A C G T C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATAGAGAT----
----AGATAASR
C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATAGAGAT--
RHHCAGAGAGGB
A C G T A C G T C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATAGAGAT-----
AAACAGATGTTTA
C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T A C G T A C G T A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

PB0023.1_Gata6_1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATAGAGAT--------
TATAGAGATAAGAATTG
A C G T C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

GATA2/MA0036.3/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATAGAGAT-----
--NNAGATAAGNN
C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ATAGAGAT--
NTATYGATCH
C G T A C A G T C G T A A C T G T C G A A T C G G T C A A G C T A C G T A C G T
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C