Information for 23-AGAAGGCTTTCT (Motif 28)

C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A A C T G A G T C A G T C A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.025e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background153.6 +/- 1.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGAAGGCTTTCT
AGGVNCCTTTGT
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AGAAGGCTTTCT---
----TTCTTTCTCTT
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGAAGGCTTTCT-
--AAGGATATNTN
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGAAGGCTTTCT---
----NNCTTTGTTNN
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAAGGCTTTCT
CAAGACGCCTTA--
A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGAAGGCTTTCT
NGAAGC------
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------AGAAGGCTTTCT---
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGAAGGCTTTCT
--CAAGCTT---
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAAGGCTTTCT--
----NNCTTCCTGN
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGAAGGCTTTCT
-CNAGGCCT---
C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A G T C A C G T
A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T