Information for 7-AGGTTAGCGT (Motif 19)

C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C A C G T C G T A C G T A A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.359e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background131.6 +/- 64.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGTTAGCGT
CAGGTAAGTAT
A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

GATA1/MA0035.4/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGTTAGCGT
NNAGATTAGAN-
A C G T A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGGTTAGCGT---
NGTAGGTTGGCATNNN
A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MYBL1/MA0776.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGTTAGCGT-
ACCGTTAACGGT
A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGGTTAGCGT
GKBCARAGGTCA----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGTTAGCGT---
-RGTTAGTGCCCY
C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGTTAGCGT
GGATTAGC--
C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGGTTAGCGT
TRAGGTCA----
A C G T A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGTTAGCGT
GAGGTCAT---
A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGGTTAGCGT
CAAAGGTCAAA--
A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T C G T A A C T G A G T C A C T G A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T A C G T