Information for 6-CAACGAAATT (Motif 22)

A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C T G
p-value:1e-3
log p-value:-8.332e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets147.0 +/- 0.0bp
Average Position of motif in Background164.7 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAACGAAATT
AGAAACGAAAGT
A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

IRF6/MA1509.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAACGAAATT
-ACCGAAACT
A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T
A C G T T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAACGAAATT---
TTGAATGAAATTCGA
A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CAACGAAATT--
CAAAATCGAAACTAA
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACGAAATT-
NTAATBNAATTA
A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAACGAAATT--
ATAAACCGAAACCAA
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

Sox1/MA0870.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAACGAAATT---
AACAATGNTATTGTT
A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAACGAAATT-
AACCAATAAAATTT
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

Sox11/MA0869.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAACGAAATT---
AACACTGAAATTGTT
A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAACGAAATT---
CGTATCGAAACCAAA
A C G T A C G T A G T C C G T A C G T A A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A