Information for 3-CTTTAAGCCG (Motif 10)

A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A C G T A C G T C G T A C G T A C G T A A C T G
p-value:1e-3
log p-value:-8.761e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background168.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTTTAAGCCG
--TTAATCCG
A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTTAAGCCG-----
CNATAATCCGNTTNT
A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

PH0035.1_Gsc/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTTTAAGCCG----
AATCGTTAATCCCTTTA
A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTTTAAGCCG
--ATAATCCC
A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAAGCCG-----
NNNATTAATCCGNTTNA
A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTTAAGCCG-----
NNNATTAATCCGNTTNA
A C G T A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTTAAGCCG
-CTTAATCCC
A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTTTAAGCCG
--CTAATCCC
A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTTTAAGCCG
-GCTAATCC-
A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTTAAGCCG-
---TAATCCCN
A G T C A C G T A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C T G A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G