Information for 11-GGGGATAGAC (Motif 27)

A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.805e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background132.1 +/- 90.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGGGATAGAC
NNNTGGGGATTNN-
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGGATAGAC--
AGGTGNCAGACAG
A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGGATAGAC-
AGGTGHCAGACA
A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PH0121.1_Obox1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGGGATAGAC---
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GGGGATAGAC---
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0122.1_Obox2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GGGGATAGAC---
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGGATAGAC-
TGGGGAAGGGCM
A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGGGATAGAC--
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGGGATAGAC---
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

ZSCAN29/MA1602.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGGGATAGAC-
NCNGTGTAGACG
A C G T A C T G A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C G T
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G