Information for 11-TAAGACTAATTT (Motif 13)

A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A
p-value:1e-4
log p-value:-9.735e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAGACTAATTT-
ACCGTGACTAATTNN
A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PH0107.1_Msx2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAAGACTAATTT-----
GAAGACCAATTAGCGCT
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

TLX2/MA1577.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TAAGACTAATTT-
-----CTAATTAN
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G C T C T G A T C A G

PH0092.1_Lhx2/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAAGACTAATTT------
-TAAACTAATTAGTGAAC
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TAAGACTAATTT
----AATAATT-
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

PH0033.1_Gbx1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAAGACTAATTT------
-TNCACTAATTAGTNNNN
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T G C A T G A C T G C A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A G C T A C T G T A C G G A T C C G T A

PAX4/MA0068.2/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TAAGACTAATTT-
-----CTAATTAG
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G

PH0175.1_Vax2/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAAGACTAATTT----
GTGCACTAATTAAGAC
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C

VSX2/MA0726.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TAAGACTAATTT-
-----CTAATTAG
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

VSX1/MA0725.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TAAGACTAATTT-
-----CTAATTAT
A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T G T C A T C G A G A C T C A G T C T G A A C G T