Information for 20-GCCAACTGAC (Motif 35)

A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.066e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif20.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background118.9 +/- 105.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GCCAACTGAC---
CGACCAACTGCCGTG
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:GCCAACTGAC-
-CCAACTGCCA
A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

MYB/MA0100.3/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GCCAACTGAC
ACCAACTGTC
A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCAACTGAC----
CGACCAACTGCCATGC
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCCAACTGAC
--YAACBGCC
A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C
A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCCAACTGAC
GCCATCTGTT
A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCCAACTGAC
CGTGCCAAG----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCCAACTGAC-
NNNCCATCTGTNN
A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCAACTGAC
GGTGCCAAGT---
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCAACTGAC-
-NHAACBGYYV
A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A