Information for 12-CGCTTGGCGG (Motif 16)

A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A T G C A G T C C G T A C G T A A C T G A G T C A C T G
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.1 +/- 59.9bp
Average Position of motif in Background79.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCGG------
NAGANTGGCGGGGNGNA
A C G T A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY2/MA0748.2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGCTTGGCGG--
-AGATGGCGGCG
A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T A C G T
A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGCTTGGCGG-
--NTTGGCANN
A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGCTTGGCGG-
TACTTGGCAGA
A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

PB0112.1_E2F2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCGG------
NNNNTTGGCGCCGANNN
A C G T A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGCTTGGCGG----
--BTKGGCGGGAAA
A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCGG------
NNNNTTGGCGCCGANNN
A C G T A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

E2F8/MA0865.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCTTGGCGG----
--TTTGGCGGGAAA
A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTGGCGG
CCGATTGGCT-
A C G T A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGCTTGGCGG
NNGTCGCGTGNCAC
A C G T A C G T A C G T A C G T A G T C A C T G G T A C A C G T A C G T A C T G A T C G A G T C A C T G A C T G
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C