Information for 3-CCGGGCTA (Motif 22)

A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A
Reverse Opposite:
C G A T C G T A C T A G A T G C A T G C A T G C C T A G T A C G
p-value:1e-6
log p-value:-1.553e+01
Information Content per bp:1.737
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif621.6
Percentage of Background Sequences with motif1.30%
Average Position of motif in Targets102.4 +/- 59.8bp
Average Position of motif in Background101.7 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCGGGCTA-
-AGGCCTAG
A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A A C G T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCGGGCTA
CNAGGCCT-
A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCGGGCTA
GGGGCCGAGGCCTG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGGGCTA
WDNCTGGGCA-
A C G T A C G T A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGGGCTA--
NNGGTTGGGCTTNN
A C G T A C G T A C G T A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A A C G T A C G T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G

PB0185.1_Tcf1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCGGGCTA--
TTGCCCGGATTAGG
A C G T A C G T A C G T A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCGGGCTA
GCTCGGSCTC
A C G T A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCGGGCTA-
-NGGGATTA
A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A A C G T
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGGGCTA-----
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCGGGCTA-----
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A G T C A G T C A T C G A T C G T A C G G A T C A C G T G C T A A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A