Information for 2-AACATATAGGGG (Motif 4)

C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T
p-value:1e-4
log p-value:-1.036e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AACATATAGGGG-----
TGCGCATAGGGGAGGAG
C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

SRF/MA0083.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AACATATAGGGG--
TGACCATATATGGTCA
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AACATATAGGGG
NACATATGGN--
C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACATATAGGGG
-ACATATGG---
C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACATATAGGGG
AACATATGTT--
C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AACATATAGGGG
TNCCATATATGG-
A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACATATAGGGG
AACATATGTT--
C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACATATAGGGG
ACCATATGGT--
C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AACATATAGGGG
ANCATATGGT--
C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACATATAGGGG
AAACATATGTTT-
A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C T G A C T G
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T