Information for 14-CGCACAATAT (Motif 31)

A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C G T A C T G A C G T A C T G A G T C A C T G
p-value:1e-3
log p-value:-7.366e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets159.0 +/- 0.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX14/MA1562.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CGCACAATAT
CCGAACAATG-
A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T
T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGCACAATAT-
--GACAATGNN
A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

SOX12/MA1561.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGCACAATAT
ACCGAACAATG-
A C G T A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T
G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGCACAATAT---
TCACGGAACAATAGGTG
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CGCACAATAT---
NNNNNGAACAATTGANN
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCACAATAT---
CTCACACAATGGCGC
A C G T A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCACAATAT---
TTAAGAACAATAAATT
A C G T A C G T A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

CEBPA/MA0102.4/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGCACAATAT
TTATTGCACAATAT
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T
C G A T C A G T T C G A G C A T C A G T C A T G G A T C C T G A G A T C G T C A C G T A A G C T G C T A G C A T

SOX8/MA0868.2/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCACAATAT
AGAACAATGG
A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

CEBPD/MA0836.2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCACAATAT
TATTGCACAATAT
A C G T A C G T A C G T A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C G T C G T A A C G T
C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T