Information for 22-AAAAACACTCAG (Motif 24)

C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.614e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets183.0 +/- 0.0bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAAAACACTCAG
--AAGCACTTAA
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AAAAACACTCAG-
--AGCCACTCAAG
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AAAAACACTCAG
--MRSCACTYAA
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-5/MA0063.2/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AAAAACACTCAG--
---ACCACTCAAAA
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Nkx3-2/MA0122.3/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAAAACACTCAG-
ATAACCACTTAAA
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAAAACACTCAG
AAACAAACATTC--
A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAAACACTCAG---
-TAACCACTCAAGAA
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T
A C G T G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAAACACTCAG
--AASCACTCAA
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAAACACTCAG
--GTACACTCAC
C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

ZNF384/MA1125.1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAAAACACTCAG
TTTAAAAAAAAA-----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A A G T C C G T A A G T C A C G T A G T C C G T A A C T G
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A A C G T A C G T A C G T A C G T A C G T