Information for 9-TGAACTTGTCAT (Motif 16)

A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-9.056e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGAACTTGTCAT
ATGAACTTT----
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAACTTGTCAT
TGAACTCA----
A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGAACTTGTCAT
TTGAMCTTTG---
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGAACTTGTCAT
-----NTGTCAN
A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGAACTTGTCAT-
-----YTGWCADY
A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

ESRRA/MA0592.3/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGAACTTGTCAT
NNTGACCTTGANN-
A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGAACTTGTCAT
BNTGDCCTTG----
A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGAACTTGTCAT
----CCTGTCAA
A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

NFIC/MA0161.2/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGAACTTGTCAT-
--TACTTGGCAGA
A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NR6A1/MA1541.1/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TGAACTTGTCAT
NTGACCTTGAACTTGAN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C G T A C T G A C G T A G T C C G T A A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C A C G T A C G T