Information for 3-TTGTTTTATGGT (Motif 7)

A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A A C G T C G T A C G T A C G T A C G T A A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX1/MA0878.2/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTGTTTTATGGT-
--GTTTTATGGCC
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TTGTTTTATGGT-
-DGWTTTATGRCN
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

HOXD13/MA0909.2/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TTGTTTTATGGT-
--GTTTTATTGGG
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

PBX2/MA1113.2/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTTATGGT
NNTGATTTATGNN
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

HOXA13/MA0650.2/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:TTGTTTTATGGT-
--GTTTTATTGGN
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TTGTTTTATGGT-
AAATGATTTATGGCT
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

CDX4/MA1473.1/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:TTGTTTTATGGT-
--GTTTTATTGCC
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TTGTTTTATGGT
--NTTTTATGAC
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TTGTTTTATGGT-
-TGATTTATGGCC
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TTGTTTTATGGT-
---TTTTATGGCM
A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C