Information for 25-TTGCTGATGGCA (Motif 31)

A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C C G T A A C G T A G T C C G T A A C T G A G T C C G T A C G T A
p-value:1e-3
log p-value:-8.382e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background142.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.4/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTGCTGATGGCA--
-TTATGATGTCATA
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

NRL/MA0842.2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TTGCTGATGGCA
AAAAGTGCTGACG---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A
C T G A C G T A C G T A G C T A C T A G G A C T C T A G T G A C A G C T C A T G C T G A A G T C C T A G A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTGCTGATGGCA
--GTTAATGGCC
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGATGGCA
AAAATGCTGACT---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTGCTGATGGCA
----VGCTGGCA
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A
A C G T A C G T A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTGCTGATGGCA-
----GGTTGGCAT
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGCTGATGGCA-
AAGATGATGTCAT
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

Isl1/MA1608.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTGCTGATGGCA
-NNCTAATGGNN
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A
A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

NEUROD1/MA1109.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTGCTGATGGCA-
GGACAGATGGCAG
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGCTGATGGCA-
----TNNGGGCAG
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G