Information for 1-GTCCTAATTC (Motif 5)

T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C
Reverse Opposite:
C T A G G C T A C G T A A G C T A C G T G T C A A T C G A C T G C T G A A G T C
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.751
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif101.7
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets109.8 +/- 39.7bp
Average Position of motif in Background103.7 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX4/MA0068.2/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GTCCTAATTC-
---CTAATTAG
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T
A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCCTAATTC
--NCTAATTA
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C
A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCCTAATTC----
GAGCCCTTGTCCCTAA
A C G T A C G T T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

TLX2/MA1577.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTCCTAATTC-
---CTAATTAN
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G C T C T G A T C A G

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTCCTAATTC--
--GCTAATCCCC
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

EMX2/MA0886.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTCCTAATTC--
--NCTAATTANN
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T A C G T
A C G T A C G T T A C G A G T C A C G T G T C A C G T A A C G T C A G T C T G A T A C G A G T C

EMX1/MA0612.2/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTCCTAATTC-
---CTAATTAN
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T
A C G T A C G T A C G T A T G C A C G T G T C A C G T A A C G T A C G T C T G A T A C G

VSX2/MA0726.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCCTAATTC-
---CTAATTAG
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T
A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

HOXD3/MA0912.2/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCCTAATTC-
---CTAATTAC
T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C A C G T
A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GTCCTAATTC
BTGACCTAVTTW
A C G T A C G T T C A G A G C T A G T C A T G C A C G T T G C A T C G A A C G T C G A T G A T C
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T