Information for 2-TATACATGGA (Motif 7)

A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A
Reverse Opposite:
A C G T A G T C G A T C C G T A A C G T A C T G G A C T C G T A A G C T C G T A
p-value:1e-9
log p-value:-2.105e+01
Information Content per bp:1.839
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif4.68%
Number of Background Sequences with motif328.6
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets88.9 +/- 60.7bp
Average Position of motif in Background98.5 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TATACATGGA-----
TAAATACATGTAAAATT
A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TATACATGGA
GHATATKCAT---
A C G T A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---TATACATGGA
GAATATTCAT---
A C G T A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TATACATGGA-----
AATATACATGTAATATA
A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TATACATGGA-----
AAAATACATGTAATACT
A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TATACATGGA-----
AAAATACATGTAAAAAT
A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A A C G T A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TATACATGGA-----
AATATACATGTAAAATT
A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TATACATGGA----
NNTTTTACATGTANNNT
A C G T A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A A C G T A C G T A C G T A C G T
G C A T T A C G G C A T G C A T C A G T C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G A C T C G T A G C A T G C A T

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TATACATGGA
ACTATAAATAGA
A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

FOXA1/MA0148.4/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TATACATGGA
ATGTAAACATGT-
A C G T A C G T A C G T A C G T T C G A C G A T C T G A A G T C G T C A A C G T C T A G T C A G G T C A
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T A C G T