Information for 11-GTCTATAT (Motif 36)

C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T
Reverse Opposite:
C G T A A C G T C G T A A G C T C G T A C A T G T G C A A G T C
p-value:1e-4
log p-value:-1.070e+01
Information Content per bp:1.787
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.43%
Number of Background Sequences with motif1736.2
Percentage of Background Sequences with motif3.57%
Average Position of motif in Targets110.8 +/- 50.4bp
Average Position of motif in Background102.4 +/- 62.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GTCTATAT-----
ANNNGGATATATCCNNN
A C G T A C G T A C G T A C G T C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATAT
RRTCAATA-
A C G T C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTCTATAT
TATGTAAATAT
A C G T A C G T A C G T C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCTATAT--
AGGTCTCTAACC
A C G T A C G T C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCTATAT
TGTCTAGA-
A C G T C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCTATAT--
NTGTTTAYATWW
A C G T A C G T C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTCTATAT-----
-GCTATTTTTGGM
C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCTATAT-----
-KCTATTTTTRGH
C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GTCTATAT----
--CTATTTTTGG
C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTCTATAT--
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T A C G C A T T C G A A C G T T G C A C G A T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C