Information for 5-ACTCGAAGCT (Motif 17)

C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A C G T A G T C A C T G C G T A A C T G A C G T
p-value:1e-3
log p-value:-8.428e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background14.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACTCGAAGCT
---NGAAGC-
C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:ACTCGAAGCT--
-----AAGCTTG
C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACTCGAAGCT--
CAAAATCGAAACTAA
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTCGAAGCT
CCACTTGAA---
A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACTCGAAGCT--
ATAAACCGAAACCAA
A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:ACTCGAAGCT
---CGGAGC-
C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

IRF6/MA1509.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACTCGAAGCT
-ACCGAAACT
C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T
A C G T T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T

ETS2/MA1484.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACTCGAAGCT
GACCGGAAGT-
A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T
C T A G C T G A T A G C G T A C C T A G T A C G T G C A G C T A C T A G A G C T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACTCGAAGCT---
CGTATCGAAACCAAA
A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ACTCGAAGCT-
ATAACCACTTGAAAATT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T