Information for 4-CTAAATTACG (Motif 9)

A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A C G T A A C G T A C G T A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.291e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CTAAATTACG---
NNCTNAATTATGANN
A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

DRGX/MA1481.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTAAATTACG
-CTAATTAC-
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A G T C A G C T T C G A C G T A A C G T A G C T C T G A T A G C A C G T

DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTAAATTACG
--TAATTASS
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A C G T G A C T T G C A G C T A G C A T A C G T T C G A A T G C T A C G

LMX1A/MA0702.2/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CTAAATTACG
-TTAATTAA-
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A G C T A G C T C G T A G T C A A G C T A C G T T C G A T G C A A C G T

HOXB7/MA1501.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTAAATTACG
GNTAATTACC
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
A T C G A G C T A G C T C G T A G T C A A C G T A C G T T C G A G T A C A G T C

Dlx1/MA0879.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTAAATTACG
CCTAATTATC
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

PH0055.1_Hoxa7_2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTAAATTACG--
TNCCATTAATTACTNC
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G A C G T A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

UNCX/MA0721.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAAATTACG
-CTAATTAA-
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A G T C G A C T C T G A G T C A G A C T G A C T G C T A T C G A A C G T

TLX2/MA1577.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAAATTACG
-CTAATTAG-
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A G T C G A C T C T G A C G T A A C G T A C G T C G T A T C A G A C G T

VAX1/MA0722.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAAATTACG
-CTAATTAC-
A G T C A C G T C G T A C G T A C G T A A C G T A C G T C G T A A G T C A C T G
A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C A C G T