Information for 3-TCAATAGACG (Motif 6)

A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C T G C G T A
p-value:1e-4
log p-value:-9.297e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets77.0 +/- 0.0bp
Average Position of motif in Background167.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TCAATAGACG
RRTCAATA----
A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------TCAATAGACG
AAAAAATCAATAAATA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCAATAGACG
DGATCRATAN---
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCAATAGACG
HNRAATCAAT-----
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCAATAGACG
GAACAATGG---
A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------TCAATAGACG
TCACGGAACAATAGGTG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TCAATAGACG
NNNNNGAACAATTGANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCAATAGACG
AAGCAATAAAAA
A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCAATAGACG
TAATCGATAA---
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T A C G T A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCAATAGACG
ATCATTAG---
A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C T G C G T A A G T C A C T G
T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G A C G T A C G T A C G T