Information for 2-GTGBTAAGGDCH (Motif 2)

A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
Reverse Opposite:
C A G T A C T G G A C T G T A C A T G C A C G T C G A T C G T A T C G A A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.475e+01
Information Content per bp:1.745
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif740.8
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets100.5 +/- 52.1bp
Average Position of motif in Background99.6 +/- 84.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTGBTAAGGDCH
AGGTGTTAAT----
A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGBTAAGGDCH
AAGGTGTKAA-----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTGBTAAGGDCH
DAGGTGTBAA-----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T A C G T A C G T A C G T A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTGBTAAGGDCH-
GGGTCCAAAGGTCAC
A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A A C G T
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

TBX6/MA1567.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTGBTAAGGDCH
GAGGTGTGAA-----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTGBTAAGGDCH
AAGGTGTGAAA----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGBTAAGGDCH
TAGGTGTGAAG----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGBTAAGGDCH
AGGTGTGAAA----
A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T

TBX3/MA1566.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGBTAAGGDCH
GAGGTGTGAA-----
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGBTAAGGDCH
AGGTGTGAAM----
A C G T A C G T A C T G A C G T A C T G A C G T C G A T C G T A C G T A T A C G A C T G C G T A A G T C G C T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T