Information for 6-CTTGTAGTGR (Motif 16)

T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A
Reverse Opposite:
A G C T T G A C G T C A A T G C G C A T C G T A G A T C G T C A C G T A A T C G
p-value:1e-7
log p-value:-1.814e+01
Information Content per bp:1.562
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif153.7
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets114.2 +/- 51.3bp
Average Position of motif in Background99.7 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTTGTAGTGR
CCATTGTTNY--
A C G T A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTGTAGTGR-
CCTTTTATAGNC
A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTTGTAGTGR---
GTNTTGTTGTGANNT
A C G T A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTTGTAGTGR
GGGAATTGTAGT--
A C G T A C G T A C G T A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTGTAGTGR--
NNATTTTATTGGNN
A C G T A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTAGTGR----
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

SOX15/MA1152.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTTGTAGTGR
CTATTGTTTT--
A C G T A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A
A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTGTAGTGR---
NNANTTTTATTGGNNN
A C G T A C G T A C G T T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTTGTAGTGR
ATTGTT----
T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTTGTAGTGR-
-BTBRAGTGSN
T A G C G C A T C A G T C T A G G C A T C G T A T A C G C A G T A C T G T C G A A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C