Information for 20-CAGCACCCTTGT (Motif 20)

A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGCACCCTTGT------
--GAGCCCTTGTCCCTAA
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CAGCACCCTTGT-
-----CCWTTGTY
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CAGCACCCTTGT---
-----CCWTTGTYYB
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGCACCCTTGT--
NNGCACCTTTCTCC
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGCACCCTTGT--
----NCCATTGTTY
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGCACCCTTGT--
---NNCCATTGTNN
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CAGCACCCTTGT---
-----CCATTGTTYB
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGCACCCTTGT--
---NNCCATTGTNN
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGCACCCTTGT-----
--NNNCCATTGTGTNAN
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

CTCFL/MA1102.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGCACCCTTGT
GCGCCCCCTGNN
A G T C C G T A A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C T G A C G T
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T