Information for 2-TCGCATCTAC (Motif 25)

A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G C G T A A C G T A C T G A G T C A C T G C G T A
p-value:1e-4
log p-value:-9.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets185.0 +/- 0.0bp
Average Position of motif in Background183.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCGCATCTAC-
-CGCAGCTGCG
A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

TBX15/MA0803.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCGCATCTAC
TCACACCT--
A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCGCATCTAC-
-NNCATCTGNN
A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C A C G T
A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TCGCATCTAC
TCACACCT--
A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCGCATCTAC
CTTCACACCTA-
A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T

TBX18/MA1565.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCGCATCTAC
NTTCACACCTCC
A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCGCATCTAC
NTTTTCACACCTT-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCGCATCTAC
TCACACCT--
A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCGCATCTAC
TTVACACCTH-
A C G T A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCGCATCTAC
TTCACACCTT-
A C G T A C G T A G T C A C T G A G T C C G T A A C G T A G T C A C G T C G T A A G T C
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T