Information for 3-TGAGGWCA (Motif 14)

C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A
Reverse Opposite:
G C A T C T A G C G A T A G T C G T A C A G C T T G A C C G T A
p-value:1e-4
log p-value:-9.342e+00
Information Content per bp:1.699
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif1344.3
Percentage of Background Sequences with motif1.18%
Average Position of motif in Targets76.3 +/- 39.2bp
Average Position of motif in Background99.1 +/- 85.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGAGGWCA
TRAGGTCA
C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

ATF2/MA1632.1/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---TGAGGWCA--
AAATGAGGTCATT
A C G T A C G T A C G T C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A A C G T A C G T
C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---TGAGGWCA-
NRRTGACGTCAT
A C G T A C G T A C G T C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TGAGGWCA
AGRGGTCA
C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

CREB1/MA0018.4/Jaspar

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TGAGGWCA--
TTATGATGTCATA
A C G T A C G T A C G T C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A A C G T A C G T
G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TGAGGWCA-
-AAGGTCAC
C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A A C G T
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGWCA---
ATGACGTCATBB
A C G T C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A A C G T A C G T A C G T
T C G A A C G T A C T G C G T A A G T C T C A G C G A T G T A C C G T A A G C T A G C T A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGAGGWCA-
NGRTGACGTCAY
A C G T A C G T A C G T C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----TGAGGWCA
NRBCARRGGTCA
A C G T A C G T A C G T A C G T C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----TGAGGWCA
GKBCARAGGTCA
A C G T A C G T A C G T A C G T C G A T A C T G C T G A A C T G T C A G G C T A A G T C C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A