Information for 11-ATGCGAATGG (Motif 19)

C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G A T A C G T A G T C A C T G A G T C G T C A A C G T
p-value:1e-8
log p-value:-2.054e+01
Information Content per bp:1.911
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets104.2 +/- 63.6bp
Average Position of motif in Background97.9 +/- 50.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATGCGAATGG-
WATGCAAATGAG
A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGAATGG
TTATGCAAAT--
A C G T A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATGCGAATGG
TATGCAAAT--
A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGCGAATGG--
-NNCTAATGGNN
C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATGCGAATGG-
ATATGCAAATNNN
A C G T A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATGCGAATGG
ATATGCAAAT--
A C G T A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATGCGAATGG-
TATGCWAATBAV
A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATGCGAATGG--
TTGTATGCAAATTAGA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGCGAATGG-----
---TGATTGGCTANN
C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGCGAATGG
TATGCAAAT--
A C G T C G T A A C G T A C T G A G T C A C T G G T C A C G T A A C G T A C T G A C T G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T