Information for 13-CAAGTGGGTCCG (Motif 13)

A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C T G
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGGGTCCG
NTCAAGTGGN----
A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGTGGGTCCG
AANTTCAAGTGGCTTN-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGTGGGTCCG
AAATTCAAGTGGNTTN-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGTGGGTCCG
AATNTTAAGTGGNTNN-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CAAGTGGGTCCG
NTCAAGTGG-----
A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAAGTGGGTCCG-
---TWVGGTCCGC
A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G A C G T
A C G T A C G T A C G T A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CAAGTGGGTCCG
AATTTCAAGTGGCTTN-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CAAGTGGGTCCG-
---GTGGGCCCCA
A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G A C G T
A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAGTGGGTCCG
-AAYTAGGTCA-
A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAGTGGGTCCG
-AAYTAGGTCA-
A G T C C G T A C G T A A C T G A C G T A C T G A C T G A C T G A C G T A G T C A G T C A C T G
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T