| p-value: | 1e-3 |
| log p-value: | -8.581e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 113.0 +/- 0.0bp |
| Average Position of motif in Background | 129.7 +/- 22.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Zic2/MA1629.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATCTCATAGCAG---- --CTCACAGCAGGGGG |
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RFX1/MA0509.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATCTCATAGCAG--- -TNCCATAGCAACNN |
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PB0205.1_Zic1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATCTCATAGCAG---- -CCACACAGCAGGAGA |
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PB0098.1_Zfp410_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------ATCTCATAGCAG NNNTCCATCCCATAANN- |
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ZNF317/MA1593.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ATCTCATAGCAG--- ---TAACAGCAGACT |
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|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 6 |
| Score: | 0.56 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | ATCTCATAGCAG---- ----CACAGCAGGGGG |
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|
|
PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATCTCATAGCAG---- -CCGCATAGCAACGGA |
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|
|
ZNF410/MA0752.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATCTCATAGCAG-- TCCATCCCATAATACTC |
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|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATCTCATAGCAG---- -TACCATAGCAACGGT |
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PB0120.1_Foxj1_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATCTCATAGCAG--- ATGTCACAACAACAC |
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