Information for 4-GAGCTTAACG (Motif 13)

A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T C G T A C G T A A C T G A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.464e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background187.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL1/MA0877.2/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAGCTTAACG-
---CTAAACGG
A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T
A C G T A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

MYBL1/MA0776.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAGCTTAACG--
ACCGTTAACGGT
A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

HOXA9/MA0594.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGCTTAACG--
--NNTTTACGAC
A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

OVOL2/MA1545.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCTTAACG----
-NNNNTAACGGTNN
A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

MYBL2/MA0777.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTTAACG---
GACNGTTTAACGGTT
A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGCTTAACG--
--GCTAAACGGT
A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGCTTAACG
CAAGCTT----
A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGCTTAACG---
-ANTTTTACGACC
A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

POL001.1_MTE/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAGCTTAACG-----
TTTCGAGCGGAACGGTCGC
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GAGCTTAACG--
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T