Information for 15-CGGGCAAATG (Motif 37)

A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C T G
p-value:1e-3
log p-value:-7.235e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background177.1 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGGGCAAATG--
NTGGCCAATGAG
A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAAATG
TNNGGGCAG---
A C G T A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGGCAAATG---
-NNACATATGGCN
A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A T C G T C A G T G C A A T G C T C G A G C A T C G T A A G C T A T C G T A C G A G T C T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGGCAAATG-
AAGGCAAGTGT
A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGGCAAATG---
TAGGGCAAAGGTCA
A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGGCAAATG
NGTGGGCAT---
A C G T A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGGCAAATG------
AAGGCCAGATGGTCCGG
A C G T A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NEUROG2/MA0669.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGGCAAATG--
--GACATATGTT
A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

ATOH7/MA1468.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGGGCAAATG--
--GACATATGTT
A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T

MXI1/MA1108.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGGCAAATG--
--GACACATGGC
A G T C A C T G A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C