Information for 1-GKMGKWGWYAGA (Motif 1)

A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C A C G T C T A G C G T A A G T C C G T A G T C A A G T C A C G T G T A C A G T C
p-value:1e-6
log p-value:-1.548e+01
Information Content per bp:1.810
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif127.5
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets166.0 +/- 14.9bp
Average Position of motif in Background99.5 +/- 92.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GKMGKWGWYAGA---
--AGGTGNCAGACAG
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GKMGKWGWYAGA--
--AGGTGHCAGACA
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GKMGKWGWYAGA
GGTGYTGACAGS
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GKMGKWGWYAGA
--AGGTGTCA--
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GKMGKWGWYAGA-
---VBTGWCAGCB
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GKMGKWGWYAGA
---RHTGWCAR-
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

TBX18/MA1565.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GKMGKWGWYAGA
GGAGGTGTGAAA
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GKMGKWGWYAGA
-DAGGTGTBAA-
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
A C G T C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GKMGKWGWYAGA
--ARNTGACA--
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GKMGKWGWYAGA
--AGGTGTGAAA
A C T G A C T G G T C A A C T G A C G T C G A T A C T G C G A T A G T C C G T A A C T G C G T A
A C G T A C G T C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A