Information for 4-GCTAAATGACAC (Motif 7)

A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C T G A G T C
p-value:1e-4
log p-value:-1.025e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GCTAAATGACAC------
-ATAAATGACACCTATCA
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTAAATGACAC
---ARNTGACA-
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTAAATGACAC
GCTAAACGGT--
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GCTAAATGACAC
-----TTGACAG
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

NR1H4/MA1110.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCTAAATGACAC-
--TCAATGACCTA
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

BARHL1/MA0877.2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCTAAATGACAC
-CTAAACGG---
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C
A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCTAAATGACAC-
-----TTGACAGG
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

NR4A1/MA1112.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTAAATGACAC-
-TTAAAGGTCAAA
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

PKNOX1/MA0782.2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTAAATGACAC---
TTTGAGTGACAGCTA
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTAAATGACAC-
-BTGABTGACAGS
A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C