Information for 19-TGGTCTTGTGCC (Motif 19)

A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A
p-value:1e-4
log p-value:-9.606e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.0 +/- 0.0bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TGGTCTTGTGCC
--RTCATGTGAC
A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C
A C G T A C G T T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

USF1/MA0093.3/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGTCTTGTGCC--
TGGTCATGTGACCT
A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T

USF2/MA0526.3/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGTCTTGTGCC--
TGGTCATGTGACCT
A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T
C A G T C T A G T C A G A G C T A T G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G C A T

NFIB/MA1643.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGGTCTTGTGCC-----
TGCCTGGCATTGTGCCAAGCA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G A G T C G A T C C A G T A C T G C A T G T G A C G C T A A G C T C A G T T C A G C G A T A C T G A T G C A G T C G T C A C T G A T C A G G A C T G C T A

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGTCTTGTGCC---
GTTGGCACGGTGCCAGG
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A T C G G C A T A C G T A C T G A C T G G T A C C T G A A G T C A T C G C A T G G A C T A C T G A G T C A G T C G T C A C T A G A T C G

ZBTB6/MA1581.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGGTCTTGTGCC--
-GTCCTTGAGCCCG
A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T
A C G T C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCTTGTGCC-
TTGGCATGGTGCCA
A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGTCTTGTGCC---
GTTGGCACGGTGCCAAC
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A T C G G A C T A C G T A C T G A T C G G T A C C T G A A G T C T A C G T C A G G A C T A C T G A T G C G T A C C G T A C T G A A T G C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGGTCTTGTGCC--
CTTGGCANNNTGCCAA
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCTTGTGCC
NNANTGGTGGTCTTNNN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A G T C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T