Information for 1-AVGCAGAATCTC (Motif 1)

C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
Reverse Opposite:
A T C G C G T A A C T G C T G A A G C T G C A T A G T C A C G T C T A G A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.809
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif153.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets60.6 +/- 21.2bp
Average Position of motif in Background94.1 +/- 81.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AVGCAGAATCTC--
ADGGYAGYAGCATCT
A C G T C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----AVGCAGAATCTC
NNNTTAGGTAGCNTNT-
A C G T A C G T A C G T A C G T A C G T C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AVGCAGAATCTC
AAACAGAAGCAG
C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

ETV4/MA0764.2/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AVGCAGAATCTC
ACAGGAAGTG----
A C G T A C G T C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AVGCAGAATCTC
NNTGTAGGTAGCANNT-
A C G T A C G T A C G T A C G T A C G T C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AVGCAGAATCTC
AGGAAACAGCTG
C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AVGCAGAATCTC
-NGAAGC-----
C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AVGCAGAATCTC
AGAAACAGAAACT-
A C G T A C G T C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.47
Offset:1
Orientation:reverse strand
Alignment:AVGCAGAATCTC
-ANCAGGATGT-
C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T

ELF3/MA0640.2/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:reverse strand
Alignment:---AVGCAGAATCTC
ANCAGGAAGTGGNN-
A C G T A C G T A C G T C G T A T C G A A C T G A G T C C G T A A C T G C G T A C T G A A G C T A G T C A C G T A T G C
C G T A T A G C T A G C T G C A T C A G C T A G T G C A C T G A T C A G G C A T C T A G T C A G T C G A C T G A A C G T