Information for 11-TGCTGCCAYT (Motif 20)

C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T
Reverse Opposite:
C G T A T C A G A C G T T A C G C T A G A G T C C G T A A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.981e+01
Information Content per bp:1.783
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.10%
Number of Background Sequences with motif605.5
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets106.8 +/- 54.1bp
Average Position of motif in Background97.3 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGCCAYT---
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TGCTGCCAYT-
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCTGCCAYT---
-NCTGTCAATCAN
C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCTGCCAYT
NGCTN-----
C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCTGCCAYT---
-SCTGTCAVTCAV
C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

PKNOX1/MA0782.2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCCAYT----
NNGCTGTCACTCANN
A C G T C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCTGCCAYT
VGCTGGCA--
C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGCCAYT
NNCCTGCTGNG---
A C G T A C G T A C G T A C G T C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGCCAYT
NNAGCAGCTGCT---
A C G T A C G T A C G T A C G T A C G T C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCTGCCAYT--
AGATGCTRCTRCCHT
A C G T A C G T A C G T C G A T A C T G G T A C A C G T C T A G A G T C A T G C G T C A A G T C A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T