Information for 16-GCATCATTGAAA (Motif 24)

A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.918e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCATCATTGAAA--
NANTTCATTGAATTA
A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCATCATTGAAA-
TATCATAATTAAGGA
A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCATCATTGAAA---
NAAANTTATTGAANCAN
A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCATCATTGAAA
CCATCAATCAAA
A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

ATF4/MA0833.2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCATCATTGAAA
NNATTGCATCATNN---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCATCATTGAAA
ATTGCATCAK-----
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A
T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GCATCATTGAAA-
----NATTCAAAT
A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCATCATTGAAA
NNGATTGCATCATNN---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A
C T G A C G A T C A T G T C G A G C A T C A G T C A T G G A T C C T G A G A C T G T A C G C T A A G C T G C A T G C A T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCATCATTGAAA
ATTGCATCAT-----
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A
T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCATCATTGAAA
ATGCATAATTCA--
A C G T A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C T G C G T A C G T A C G T A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T