Information for 2-GGAGTTAGGGGT (Motif 2)

A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C G T A C G T A C A G T C A C G T C G T A C G T A G T A C A C G T A G T C A G T C
p-value:1e-13
log p-value:-3.032e+01
Information Content per bp:1.906
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets118.7 +/- 48.4bp
Average Position of motif in Background108.1 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL1/MA0776.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAGTTAGGGGT
ACCGTTAACGGT
A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAGTTAGGGGT-------
--GGCGAGGGGTCAAGGGC
A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGAGTTAGGGGT--
----GGAGGGGGAA
A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTTAGGGGT
NGGGATTA-----
A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGAGTTAGGGGT
AAATGATTTATGGCT
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

ZNF135/MA1587.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTTAGGGGT
TCAGGAGGTCGAGG-
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G A C G T

ZNF652/MA1657.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGAGTTAGGGGT
GAAAGAGTTAAA---
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------GGAGTTAGGGGT
NMMNBAAAGGGTTAA----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGAGTTAGGGGT
TGATTTATGGCC
A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGAGTTAGGGGT-------
--NTNNNGGGGTCANGNNN
A C T G A C T G C G T A A C T G A C G T A C G T C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A