Information for 19-CACAGGTGGCAG (Motif 20)

A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.301e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background121.5 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGTGGCAG
NNACAGGTGTNN-
A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T A C G T

Rbpjl/MA1621.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CACAGGTGGCAG
NNNACAGGTGTNNN
A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CACAGGTGGCAG
NNCAGGTGNN--
A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CACAGGTGGCAG
NNGCAGGTGNN--
A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACAGGTGGCAG
NNGACAGGTGCNN-
A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACAGGTGGCAG
AACAGGTGNT--
A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACAGGTGGCAG
NNGACAGGTGCNN-
A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CACAGGTGGCAG
GAAGAACAGGTGTCCG
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

SCRT1/MA0743.2/Jaspar

Match Rank:9
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACAGGTGGCAG
AATTCAACAGGTGGTT-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CACAGGTGGCAG
TGACAGGTGTCA-
A C G T A G T C C G T A A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C C G T A A C T G
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T