Information for 10-CTTGCCTTCG (Motif 19)

A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C T G A C T G A G T C C G T A C G T A A C T G
p-value:1e-9
log p-value:-2.085e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 27.4bp
Average Position of motif in Background40.0 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCCTTCG
NNACTTGCCTT--
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTGCCTTCG
-TTGACTTTT
A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCCTTCG
NNACTTACCTN--
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTTGCCTTCG
----GCTTCC
A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTTGCCTTCG
CTGACCTTTG
A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTTGCCTTCG
--TGCCAGCB
A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTTGCCTTCG-----
-NTGCCCTAGGGCAA
A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A G C T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTTGCCTTCG---
--TGCCTGAGGCN
A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTTGCCTTCG
BNTGDCCTTG-
A C G T A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTTGCCTTCG-----
ATTGCCTCAGGCAAT
A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T