Information for 14-TGAGGGATGCAG (Motif 19)

A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A G T C C G T A A C G T A G T C A G T C A T G C A C G T A G T C C G T A
p-value:1e-6
log p-value:-1.501e+01
Information Content per bp:1.956
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.3 +/- 54.6bp
Average Position of motif in Background112.6 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)3.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAGGGATGCAG
TGATKGATGR--
A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T A C G T

Znf281/MA1630.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAGGGATGCAG
GGTGGGGGAGG---
A C G T A C G T A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G A C G T A C G T A C G T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGAGGGATGCAG
--TGGAATGYRG
A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
A C G T A C G T G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGGATGCAG
ATGATKGATGRC-
A C G T A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGAGGGATGCAG
--TGGAATGT--
A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAGGGATGCAG-
--AGGGTAACAGC
A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G A C G T
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGAGGGATGCAG
CCWGGAATGY--
A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGAGGGATGCAG-------
--NNNANTGCAGTGCNNTT
A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGAGGGATGCAG
TGATTGATGA--
A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGGATGCAG
NNTGATTGATGNN-
A C G T A C G T A C G T A C T G C G T A A T C G A C T G C T A G C G T A A C G T A C T G A G T C C G T A C T A G
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C A C G T