Information for 2-ATACACAGAA (Motif 4)

C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A
Reverse Opposite:
C G A T A C G T A G T C A C G T A T C G A C G T A C T G A C G T C G T A A C G T
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif278.2
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets55.4 +/- 32.2bp
Average Position of motif in Background103.0 +/- 77.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----ATACACAGAA
TCCAATCCACA---
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATACACAGAA
SSAATCCACANN-
A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T

Stat2/MA1623.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATACACAGAA---
AGAAACAGAAACT
C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATACACAGAA--
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SOX10/MA0442.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATACACAGAA
AAAACAAAGAA
A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Stat5b/MA1625.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATACACAGAA---
CATTTCCCAGAAATC
A C G T A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATACACAGAA---
AAAGTAAACAAAAATT
A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Dmrt1/MA1603.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATACACAGAA--
GATACAAAGTATC
A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A A C G T A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

OSR2/MA1646.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATACACAGAA----
--AAACAGAAGCAG
C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

Foxf1/MA1606.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATACACAGAA
ATGTAAACAAA-
A C G T A C G T C G T A A C G T C G T A A G T C C G T A A T G C C G T A A C T G C G T A C G T A
C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A A C G T