Information for 7-GKAAAAGWCAGA (Motif 8)

A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G C G A T A G T C C G A T A C G T A C G T A C G T T G A C A G T C
p-value:1e-7
log p-value:-1.736e+01
Information Content per bp:1.858
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.62%
Number of Background Sequences with motif65.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets94.0 +/- 34.3bp
Average Position of motif in Background96.9 +/- 51.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A1/MA1112.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GKAAAAGWCAGA
TTAAAGGTCAAA
A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GKAAAAGWCAGA
ANGNAAAGGTCA--
A C G T A C G T A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GKAAAAGWCAGA--
----ATGCCAGACN
A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GKAAAAGWCAGA
--AAAAGTCAA-
A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GKAAAAGWCAGA
-CAAAGGTCAAA
A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GKAAAAGWCAGA
-CAAAGGTCAG-
A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GKAAAAGWCAGA
TGGAAAA------
A C G T A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GKAAAAGWCAGA
TTCAAAWTAAAAGTC---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GKAAAAGWCAGA--
--AGGTGHCAGACA
A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GKAAAAGWCAGA
--ARNTGACA--
A C T G A C T G C G T A G T C A C G T A C G T A A C T G G C T A A G T C C G T A A C T G C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T