Information for 1-GCTTCDTTGGAB (Motif 1)

T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
Reverse Opposite:
T C G A C A G T A G T C A G T C C G T A G T C A G A T C A C T G C T G A C G T A T A C G A T G C
p-value:1e-7
log p-value:-1.799e+01
Information Content per bp:1.648
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif46.15%
Number of Background Sequences with motif1045.4
Percentage of Background Sequences with motif1.46%
Average Position of motif in Targets115.2 +/- 56.1bp
Average Position of motif in Background102.5 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTTCDTTGGAB
GCTTCC------
T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCDTTGGAB
NNGCTTCTGTNN--
A C G T A C G T T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCTTCDTTGGAB
-TTTCATTRCC-
T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTTCDTTGGAB---
ANTTCTCAGGAANNN
T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCDTTGGAB--
NANTTCATTGAATTA
A C G T T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T A C G T A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTTCDTTGGAB
ANTTCTNNAGAA
T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTTCDTTGGAB
-TTTCATKGCC-
T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTTCDTTGGAB
--TTCTNMGGAA
T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTTCDTTGGAB
NTTTCATTRCHD
T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCDTTGGAB
TGGTTTCAGT----
A C G T A C G T T A C G A G T C A C G T A G C T A G T C C A T G A C G T C G A T T C A G T A C G G C T A A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T A C G T