| p-value: | 1e-5 |
| log p-value: | -1.178e+01 |
| Information Content per bp: | 1.958 |
| Number of Target Sequences with motif | 16.0 |
| Percentage of Target Sequences with motif | 1.43% |
| Number of Background Sequences with motif | 181.1 |
| Percentage of Background Sequences with motif | 0.37% |
| Average Position of motif in Targets | 98.8 +/- 53.9bp |
| Average Position of motif in Background | 98.2 +/- 53.0bp |
| Strand Bias (log2 ratio + to - strand density) | 1.1 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ACTTGACC- TGACCTTGACCT |
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|
|
NKX2-8/MA0673.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACTTGACC CCACTTGAA- |
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|
|
PB0030.1_Hnf4a_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.75 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACTTGACC------- NNANTTGACCCCTNNNN |
|
|
|
NR6A1/MA1541.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.74 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ACTTGACC----- NTGACCTTGAACTTGAN |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 5 |
| Score: | 0.74 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | ACTTGACC- ---TGACCT |
|
|
|
PB0157.1_Rara_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ACTTGACC------- NNCNTGACCCCGCTCT |
|
|
|
NKX2-3/MA0672.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.73 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ACTTGACC ACCACTTGAA- |
|
|
|
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 8 |
| Score: | 0.73 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACTTGACC---- --TTGAMCTTTG |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.73 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ACTTGACC--- --NTGACCTCN |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ACTTGACC-- --NTGACCTN |
|
|
|