Information for 4-GGAGTATGCTTC (Motif 4)

A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A A C T G G T A C G T C A A C G T C G T A A G T C A G C T A G T C A G T C
p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.701
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif1168.5
Percentage of Background Sequences with motif1.78%
Average Position of motif in Targets115.3 +/- 59.1bp
Average Position of motif in Background103.3 +/- 73.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD2/MA1121.1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTATGCTTC
GNNTGGAATGTGN---
A C G T A C G T A C G T A C G T A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GGAGTATGCTTC
NTNNNAGGAGTCTCNTN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTATGCTTC
NNTGGACTTTGNN--
A C G T A C G T A C G T A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTATGCTTC
NNTGGACTTTGNN--
A C G T A C G T A C G T A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGAGTATGCTTC
-GAATATTCAT-
A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGAGTATGCTTC-
-------GCTTCC
A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

TEAD4/MA0809.2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGAGTATGCTTC
NCTGGAATGTNN---
A C G T A C G T A C G T A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGAGTATGCTTC
-GHATATKCAT-
A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GGAGTATGCTTC
NNCTGGAATGTNN---
A C G T A C G T A C G T A C G T A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGAGTATGCTTC
TGAATTATGCAT-
A C G T A C T G C T A G C T G A T A C G C G A T T G C A A C G T A C T G T A G C C G A T A C G T A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T