Information for 9-GYTRGKYTWGAW (Motif 11)

A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T
Reverse Opposite:
C G T A A G C T A G T C C G A T C G T A C T A G G T A C A G T C A G C T C G T A C T A G A G T C
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.802
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif991.0
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets32.8 +/- 21.2bp
Average Position of motif in Background99.7 +/- 79.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GYTRGKYTWGAW
NNGGTTGGGCTTNN-
A C G T A C G T A C G T A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T
A T G C C A G T C A T G A C T G G A C T C G A T C A T G A C T G A T C G A G T C C G A T A C G T A C T G C A T G A C G T

POL001.1_MTE/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GYTRGKYTWGAW-
NCGACCGCTCCGCTCGAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GYTRGKYTWGAW----
-NTGGTTTCGGTTNNN
A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GYTRGKYTWGAW
---TGTCTAGA-
A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GYTRGKYTWGAW---
GCTGACCTTGAACTN
A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GYTRGKYTWGAW---
NNNTTGGTTTCGNTNNN
A C G T A C G T A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GYTRGKYTWGAW-
---TGTCTAGACG
A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T A C G T
A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GYTRGKYTWGAW---
TNTGGTTTCGATACN
A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

SMAD5/MA1557.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GYTRGKYTWGAW-
---TGTCTAGACA
A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GYTRGKYTWGAW
--TWGTCTGV--
A C T G G A C T A C G T C T G A A C T G A C T G A G T C A C G T C G T A A C T G C T G A C G A T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T