Information for 8-CCCTCCGTGA (Motif 16)

A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T G T A C C G T A A G T C A C T G A C T G C G T A C T A G A C T G C T A G
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.914
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif13.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets88.4 +/- 42.0bp
Average Position of motif in Background76.1 +/- 50.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CCCTCCGTGA--
----NCGTGACN
A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

MAZ/MA1522.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCTCCGTGA
CGCCCCTCCCC--
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A
A T G C A T C G A T G C T A G C T A G C T A G C C A G T T G A C T A G C A G T C A G T C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCCTCCGTGA--
--TTGCGTGCVA
A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

ETV5/MA0765.2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCTCCGTGA
CCACTTCCGGC-
A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A
A T G C A T G C T C G A A T G C G A C T A G C T A T G C A T G C A C T G A T C G A G T C A C G T

OVOL2/MA1545.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCCTCCGTGA----
-GTACCGTTATGTG
A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCCTCCGTGA--
AAATTCCCCCCGGAAGT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

ELF5/MA0136.2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTCCGTGA
NACTTCCGGGT
A C G T A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A
G A C T C T G A A G T C C G A T C A G T G T A C G T A C A C T G A T C G A C T G G C A T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCTCCGTGA---
-NHGTCGTGAYDN
A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCTCCGTGA-
-CTTCCNGGAA
A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T
A C G T A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCTCCGTGA-
---TACGTGCV
A G T C A G T C A G T C A C G T A G T C A G T C A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C