Information for 3-RYBTKSBN (Motif 24)

T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
Reverse Opposite:
T G A C T A G C T A G C T G C A C G T A T A G C T C G A A G C T
p-value:1e-5
log p-value:-1.270e+01
Information Content per bp:1.439
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif11.47%
Number of Background Sequences with motif3390.9
Percentage of Background Sequences with motif7.07%
Average Position of motif in Targets100.0 +/- 55.3bp
Average Position of motif in Background101.6 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------RYBTKSBN
GCNGCCATCTTG--
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.49
Offset:-6
Orientation:reverse strand
Alignment:------RYBTKSBN--
NNNNTTGTGTGCTTNN
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--RYBTKSBN
CCACGTGGNN
A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-RYBTKSBN
CACGTGGN-
A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T

MXI1/MA1108.2/Jaspar

Match Rank:5
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---RYBTKSBN
NNCATGTGNN-
A C G T A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-RYBTKSBN-
TATGCGGGTA
A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

HIF1A/MA1106.1/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--RYBTKSBN
GTACGTGCCC
A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--RYBTKSBN
CCACGTGGNN
A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

POL005.1_DPE/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---RYBTKSBN
NACATCTTN--
A C G T A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G
C T G A C T G A A T G C C T G A C G A T T A G C G A C T C A G T A G T C A C G T A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:10
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----RYBTKSBN-
NNACATCTGGNNN
A C G T A C G T A C G T A C G T T C G A A G C T A T C G G C A T A C G T A T C G A T C G A C T G A C G T
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T