Information for 22-CTTTTTAATAGC (Motif 23)

A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A A C G T A C G T C G T A C G T A C G T A C G T A C G T A A C T G
p-value:1e-3
log p-value:-8.352e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background119.7 +/- 5.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CTTTTTAATAGC-
---TTTAATTGCN
A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T
A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTTTTTAATAGC
---TTTAAT---
A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTAATAGC-
NNNTTTNTAATACNG
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTTTTTAATAGC
--TTTTATTRGN
A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C
A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTTTTTAATAGC----
TTTATTAATTGCNNGN
A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTTTTTAATAGC-
---TTTTATGGCM
A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T
A C G T A C G T A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C

HOXD9/MA0913.2/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CTTTTTAATAGC
--NTTTTATTGC
A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C
A C G T A C G T C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C

Hmx3/MA0898.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTAATAGC----
ATTNNTTAATTGCTTGT
A C G T A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTAATAGC----
ATTNNTTAATTGCTTGT
A C G T A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTTTTAATAGC
-NTTTTACGAGN
A G T C A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C