Information for 15-GAATAGTAAC (Motif 31)

A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A A G T C A C G T C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-6.914e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif41.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background112.5 +/- 115.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GAATAGTAAC-
--NTAGCAACG
A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T
A C G T A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAATAGTAAC---
CCGCATAGCAACGGA
A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAATAGTAAC--
SCCTAGCAACAG
A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0033.1_Irf3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAATAGTAAC--
GAGAACCGAAACTG
A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAATAGTAAC-
-ACTAGTTAAC
A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T
A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

RFX1/MA0509.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAATAGTAAC--
TNCCATAGCAACNN
A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

DMRTA2/MA1478.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAATAGTAAC----
--AATGTAACAATT
A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAATAGTAAC
CCAAAAATAG----
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAATAGTAAC
CGGAAGTGAAAC
A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAATAGTAAC---
TACCATAGCAACGGT
A C G T A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T C G T A C G T A A G T C A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T