Information for 16-GATAGCCTTKCC (Motif 29)

A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
Reverse Opposite:
C T A G A C T G G T A C C G T A C G T A A C T G A C T G A G T C A C G T C G T A A C G T G T A C
p-value:1e-5
log p-value:-1.186e+01
Information Content per bp:1.818
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets93.1 +/- 51.1bp
Average Position of motif in Background91.4 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GATAGCCTTKCC
AAGATATCCTT---
A C G T A C G T A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GATAGCCTTKCC
BNTGDCCTTG--
A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GATAGCCTTKCC--
--TGACCTTTNCNT
A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR5A1/MA1540.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATAGCCTTKCC
-NTGACCTTGAN
A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
A C G T C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GATAGCCTTKCC
ANANNTGATACCCNATN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GATAGCCTTKCC
AATNTTGATACCCTATN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T A C G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GATAGCCTTKCC
ANANGTGATACCCTATN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GATAGCCTTKCC
ANANGTGATACCCTATN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GATAGCCTTKCC--
---NNACTTGCCTT
A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GATAGCCTTKCC
ANNNATGATACCCCATC-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G A T C G T A C T A G A G T C G T A C A C G T A C G T C A T G A G T C A G T C
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C A C G T