Information for 10-GGCCATGCTA (Motif 31)

A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-6.930e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background125.7 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGCCATGCTA---
GTGCCACGCGACTG
A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCCATGCTA-----
---TATGCWAATBAV
A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PAX5/MA0014.3/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATGCTA
NNGGTCACGCTC
A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATGCTA
GCNGCCATCTTG
A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Plagl1/MA1615.1/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGCCATGCTA
CCCTGGGGCCAGG---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T A C G T A C G T

YY2/MA0748.2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGCCATGCTA
CGCCGCCATNN--
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGCCATGCTA
BNTGDCCTTG---
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGCCATGCTA
AGGCCTAG---
A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGCCATGCTA-----
---WATGCAAATGAG
A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCCATGCTA
NTGACCTTGAN-
A C G T A C G T A C T G A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T C G T A
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T