Information for 13-CAAAGCTAGGCG (Motif 13)

A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C T G
p-value:1e-4
log p-value:-1.032e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAAAGCTAGGCG
--AAGCTTG---
A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCTAGGCG
AAAACAAAGAA-----
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGCTAGGCG
ANATCAAAGNN-----
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCTAGGCG
ACATCAAAGG------
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CAAAGCTAGGCG-
-----CTAGGCCT
A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGCTAGGCG
VRRACAAWGG------
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAAAGCTAGGCG----
-AAAACCTGGANHGGR
A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGCTAGGCG
ASATCAAAGG------
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGCTAGGCG
GGAACAAAGR------
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CAAAGCTAGGCG
AAAGATCAAAGGAA----
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C A C T G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A A C G T A C G T A C G T A C G T