Information for 2-AAARTACTGGAA (Motif 3)

C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C C G T A C T A G A C G T C G T A A G C T A C G T A C G T A C G T
p-value:1e-13
log p-value:-3.141e+01
Information Content per bp:1.919
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets92.3 +/- 49.5bp
Average Position of motif in Background108.4 +/- 43.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF2/MA0770.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAARTACTGGAA
GAANGTTCTAGAA
A C G T C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A
T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAARTACTGGAA--
TTTTAAGTACTTAAATT
A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAARTACTGGAA
GAACGTTCTAGAA
A C G T C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

HSF4/MA0771.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAARTACTGGAA
GAANNTTCTAGAA
A C G T C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AAARTACTGGAA---
-----NNTGGAAANN
C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAARTACTGGAA--
CAAATTCCGGAACC
C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T
G T A C G C T A C T G A G C T A G C A T C G A T G T A C T G A C T C A G T C A G C G T A G C T A G T A C G T A C

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAARTACTGGAA---
-----AATGGAAAAT
C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAARTACTGGAA
TAGAANVTTCTAGAA
A C G T A C G T A C G T C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:AAARTACTGGAA--
-------TGGAAAA
C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:AAARTACTGGAA---
-----AATGGAAAAT
C G T A C G T A C G T A C T G A C G A T C G T A A G T C A C G T A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T