Information for 11-CTCCTAGTGG (Motif 34)

A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C A C G T C G T A A C T G A C T G C G T A A C T G
p-value:1e-3
log p-value:-7.402e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background104.7 +/- 95.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------CTCCTAGTGG---
TAGCGCCCCCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:-7
Orientation:forward strand
Alignment:-------CTCCTAGTGG---
ANAGTGCCACCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-9
Orientation:forward strand
Alignment:---------CTCCTAGTGG-
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CTCCTAGTGG
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Isl1/MA1608.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTCCTAGTGG--
-NNCTAATGGNN
A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTAGTGG-
NGGCCTCCCAGGGAG
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCCTAGTGG--
------GTGGAT
A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCTAGTGG-
-NTCAAGTGGN
A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCCTAGTGG----
GCACAYAGTAGGKCY
A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

MYCN/MA0104.4/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCCTAGTGG--
GGCCACGTGGCC
A G T C A C G T A G T C A G T C A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C