| p-value: | 1e-3 |
| log p-value: | -9.187e+00 |
| Information Content per bp: | 1.838 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 909.5 |
| Percentage of Background Sequences with motif | 1.09% |
| Average Position of motif in Targets | 125.8 +/- 23.3bp |
| Average Position of motif in Background | 99.2 +/- 76.4bp |
| Strand Bias (log2 ratio + to - strand density) | -2.0 |
| Multiplicity (# of sites on avg that occur together) | 1.67 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.75 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | RCAGACCYGG CCAGACRSVB |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | RCAGACCYGG CCAGACAG-- |
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|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | RCAGACCYGG BCAGACWA-- |
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|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----RCAGACCYGG-- CAAATCCAGACATCACA |
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|
Hand1::Tcf3/MA0092.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---RCAGACCYGG ATGCCAGACN--- |
|
|
|
HINFP/MA0131.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --RCAGACCYGG NCGCGGACGTTG |
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|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----RCAGACCYGG AGGTGHCAGACA--- |
|
|
|
ZSCAN4/MA1155.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -RCAGACCYGG---- TGCACACACTGAAAA |
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|
|
Smad4/MA1153.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -RCAGACCYGG TCTAGACA--- |
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|
|
Prdm15/MA1616.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --RCAGACCYGG--- AGGAAAACCTGGAGC |
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