Information for 6-GTAATCGATC (Motif 13)

A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C T G C G T A A C G T A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX1/MA0754.1/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GTAATCGATC-
-TAATCGATAA
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:GTAATCGATC-
-TAATCGATAA
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTAATCGATC
NTNATCGATA
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

PAX7/MA0680.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTAATCGATC-
-TAATCGATTA
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C A C G T
A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

PAX3/MA0780.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTAATCGATC-
-TAATCGATTA
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C A C G T
A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GTAATCGATC-
-NTATYGATCH
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C A C G T
A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTAATCGATC
CTAATCGNT-
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTAATCGATC--
GYCATCMATCAT
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C A C G T A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTAATCGATC
HNRAATCAAT-
A C G T A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTAATCGATC-
-YCATCMATCA
A C T G A C G T C G T A C G T A A C G T A G T C A C T G C G T A A C G T A G T C A C G T
A C G T G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A