Information for 1-GACGGATAAA (Motif 2)

A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C T G A C G T A G T C
p-value:1e-4
log p-value:-1.045e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GACGGATAAA
GAATGACGAATAAC
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACGGATAAA-----
NANAGGGATTAATTATN
A C G T A C G T A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GACGGATAAA-
-CCYMATAAAA
A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GACGGATAAA
--CGGATTAN
A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GACGGATAAA-----
NNAAGGGATTAACGANT
A C G T A C G T A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GACGGATAAA----
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PB0179.1_Sp100_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GACGGATAAA--
TCCGTCGCTTAAAAG
A C G T A C G T A C G T A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GACGGATAAA
--NGGATTAN
A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GACGGATAAA-
-GNGGATTAGN
A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GACGGATAAA-----
TGTAGGGATTAATTGTC
A C G T A C G T A C T G C G T A A G T C A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C