Information for 18-CTCCGTGCAT (Motif 32)

A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C C G T A A T G C A C T G A C T G C G T A A C T G
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.957
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets90.0 +/- 44.4bp
Average Position of motif in Background90.7 +/- 50.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTCCGTGCAT
GCTCCG-----
A C G T A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCCGTGCAT----
AATCGCACTGCATTCCG
A C G T A C G T A C G T A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGCAT
TTGCGTGCVA
A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCCGTGCAT
-TACGTGCV-
A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGTGCAT
GGGTACGTGC--
A C G T A C G T A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGTGCAT
NNCTTCCTGN--
A C G T A C G T A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCCGTGCAT
RTACGTGC--
A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

ZBTB14/MA1650.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTCCGTGCAT--
CCCCGCGCACCC
A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T A C G T A C G T
T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCCGTGCAT
GGACGTGC--
A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTCCGTGCAT-
GTACCCGCATN
A G T C A C G T A G T C A G T C A T C G A C G T A C T G A G T C C G T A A C G T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G