Information for 11-TCCAGGCTGAGC (Motif 19)

A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C C G T A A C T G A G T C A G T C A C G T A C T G A C T G C G T A
p-value:1e-3
log p-value:-7.769e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background162.8 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCCAGGCTGAGC
--CCTGCTGAGH
A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCCAGGCTGAGC
--GAGSCCGAGC
A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCAGGCTGAGC---------
-YCAGGCWCAGTACCAGGCTC
A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGGCTGAGC--
TCNCCTGCTGNGNNN
A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGGCTGAGC--
NNTCCTGCTGTGNNN
A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGGCTGAGC
CCYCCYGCTGDG-
A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGGCTGAGC-
TTTTCAGTGTGTGCA
A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCAGGCTGAGC
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGGCTGAGC
CCCCCTGCTGTG-
A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic2/MA1629.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGGCTGAGC-
CCCCCTGCTGTGNN
A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G T A A C T G A G T C A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G