Information for 2-CMYKWTATATGC (Motif 2)

A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A C G T C G T A A C G T G T C A C G T A G T C A C T G A A C T G A C T G
p-value:1e-6
log p-value:-1.560e+01
Information Content per bp:1.858
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif114.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets97.3 +/- 6.1bp
Average Position of motif in Background87.6 +/- 80.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CMYKWTATATGC----
ATGGGATATATCCGCCT
A C G T A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CMYKWTATATGC
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CMYKWTATATGC
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CMYKWTATATGC
CCTTTTATAGNC
A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CMYKWTATATGC---
TCTTTATATATAAATA
A C G T A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CMYKWTATATGC
----ACATATGG
A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:CMYKWTATATGC----
------ATATGCAAAT
A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CMYKWTATATGC----
-CCATTGTATGCAAAT
A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CMYKWTATATGC--
----GHATATKCAT
A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

SRF/MA0083.3/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CMYKWTATATGC---
TGNCCATATATGGTCA
A C G T A G T C G T A C A G C T A C G T C G A T A C G T C G T A A C G T C G T A A C G T A C T G G T A C A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A