Information for 22-GGCATGACCAGC (Motif 24)

A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-8.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background98.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCATGACCAGC
GAGCGTGACCCC-
A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C A C G T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCATGACCAGC
AAGGTCATGACCTT-
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
C T G A T C G A A C T G C A T G A G C T A G T C C T G A G A C T T C A G T G C A G T A C G A T C A G C T G A C T A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCATGACCAGC
GAGGTCATGACCTC-
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCATGACCAGC
-NCGTGACN---
A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCATGACCAGC
GAGGTCATGACCTC-
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
T C A G T C G A C A T G A C T G A C G T A G T C T C G A G A C T T C A G T G C A G T A C G A T C G A C T A G T C A C G T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGCATGACCAGC
AAGGTCATGACCTT-
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCATGACCAGC--
--TYTGACCASWRG
A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCATGACCAGC
----TGACCT--
A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGCATGACCAGC
CAAAGGCGTGGCCAG-
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGCATGACCAGC--
----TGCCCAGNHW
A C T G A C T G A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A