| p-value: | 1e-3 |
| log p-value: | -8.428e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 10.00% |
| Number of Background Sequences with motif | 2.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 108.0 +/- 0.0bp |
| Average Position of motif in Background | 154.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0134.1_Hnf4a_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.75 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAAAGTCCATGA- GGCAAAAGTCCAATAA |
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HNF4A/MA0114.4/Jaspar
| Match Rank: | 2 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAAAGTCCATGA TCCAAAGTCCAAA- |
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HNF4G/MA0484.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAAAGTCCATGA TCCAAAGTCCAGA- |
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|
NR1I3/MA1534.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TAAAGTCCATGA -AAAGTTCAT-- |
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|
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------TAAAGTCCATGA CANAGNNCAAAGTCCA--- |
|
|
|
Nr2e1/MA0676.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TAAAGTCCATGA AAAAGTCAA--- |
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|
|
RARG(var.3)/MA1553.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TAAAGTCCATGA---- --AAGGTCATGACCTT |
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|
|
PH0116.1_Nkx2-9/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAAAGTCCATGA--- TTTTAAGTACTTAAATT |
|
|
|
PH0112.1_Nkx2-3/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAAAGTCCATGA-- CTTTAAGTACTTAATG |
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|
|
RARB(var.3)/MA1552.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TAAAGTCCATGA---- --AAGGTCATGACCTT |
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