Information for 10-CCTACAGACACC (Motif 14)

A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C
Reverse Opposite:
A C T G C A T G C G A T C T A G G C A T A T G C A C G T A T C G C G A T C T G A C T A G T A C G
p-value:1e-9
log p-value:-2.209e+01
Information Content per bp:1.730
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif116.9
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets106.2 +/- 57.0bp
Average Position of motif in Background96.0 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCTACAGACACC-
---CCAGACRSVB
A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZBTB26/MA1579.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTACAGACACC--
TACTCCAGAAAAGAT
A C G T A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTACAGACACC-----
GACAGAGATATCAGTGT
A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCTACAGACACC
---BCAGACWA-
A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCTACAGACACC---
CAAATCCAGACATCACA
A C G T A C G T A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTACAGACACC-
TGACCTNTAGTAACCC
A C G T A C G T A C G T A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTACAGACACC
---CCAGACAG-
A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CCTACAGACACC
--TCTAGACA--
A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C
A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTACAGACACC
GCTATAAATAGC
A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCTACAGACACC----
TGACCTAAAGTAACCTCTG
A C G T A C G T A C G T A T G C A G T C A G C T G C T A T A G C C G T A T A C G C G T A G A T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G