Information for 13-AAGTCACCGT (Motif 23)

C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T
Reverse Opposite:
C G T A G T A C A T C G A C T G A C G T A T C G C G T A A G T C A C G T A C G T
p-value:1e-5
log p-value:-1.195e+01
Information Content per bp:1.845
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif199.5
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets115.9 +/- 51.7bp
Average Position of motif in Background98.9 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--AAGTCACCGT
AAAAGTCAA---
A C G T A C G T C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

GFI1/MA0038.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGTCACCGT-
CAAATCACTGCA
A C G T C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T A C G T
A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAGTCACCGT
AAGGTCAC---
A C G T C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAGTCACCGT-
AAGGCGAAATCATCGCA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGTCACCGT
-AGTCACGC-
C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGTCACCGT
ACGTCA----
C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGTCACCGT----
NAGGTCACNNTGACC
A C G T C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T A C G T A C G T A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

ESR2/MA0258.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGTCACCGT-----
AGGTCACCCTGACCT
C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

ESR1/MA0112.3/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAGTCACCGT------
CAGGTCACCGTGACCTT
A C G T C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AAGTCACCGT
GTGACGTCACCG-
A C G T A C G T A C G T C G T A C G T A C T A G G C A T A T G C C G T A G T A C A T G C A C T G A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T