Information for 2-CTCCTCATTTAG (Motif 2)

A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A C G T A C G T A A G C T A C T G C G T A C T A G A C T G C G T A A C T G
p-value:1e-18
log p-value:-4.259e+01
Information Content per bp:1.920
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets84.3 +/- 46.7bp
Average Position of motif in Background69.0 +/- 47.7bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTCCTCATTTAG--
TATCATAATTAAGGA
A C G T A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTCATTTAG------
GCCTCCTCCMTCWGACTGKS
A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCCTCATTTAG
-NNCTCATTAT-
A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G
A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTCATTTAG---
NNNACCTCATTATCNTN
A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTCATTTAG---
GCAACCTCATTATNNNN
A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

BARHL1/MA0877.2/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCCTCATTTAG
----NCGTTTAN
A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G
A C G T A C G T A C G T A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G

SPIC/MA0687.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTCATTTAG
TACTTCCTCTTTTN-
A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G
C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTCCTCATTTAG
-AGCTCATTAT-
A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G
A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTCATTTAG
NTTATTCGTCATNC--
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCCTCATTTAG-
---ANCGTTTANN
A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G A C G T
A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C