Information for 9-AATATGATATTC (Motif 13)

C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T C G T A A C G T A G T C C G T A A C G T C G T A A C G T A C G T
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets134.3 +/- 16.2bp
Average Position of motif in Background112.6 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATATGATATTC--
NNATNTGATANNNNN
A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATATGATATTC----
ANANNTGATACCCNATN
A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AATATGATATTC
TATAATTATAATATTC
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATATGATATTC--
CTACTAGGATGTNNTN
A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATATGATATTC----
AATNTTGATACCCTATN
A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AATATGATATTC----
ANNNATGATACCCCATC
A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AATATGATATTC
GWAAYHTGABMC--
A C G T A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATATGATATTC-
ATTATGCTAATTT
C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C A C G T
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATATGATATTC
AATATGCAAATT
C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATATGATATTC--
TTGAATGAAATTCGA
A C G T C G T A C G T A A C G T C G T A A C G T A C T G C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A