Information for 5-ATGGCTGGTAAC (Motif 5)

C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C
Reverse Opposite:
C T A G A C G T A C G T C G T A A G T C G T A C C G T A A C T G A G T C A G T C C G T A A C G T
p-value:1e-4
log p-value:-9.936e+00
Information Content per bp:1.938
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif168.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets112.0 +/- 55.2bp
Average Position of motif in Background104.5 +/- 84.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGGCTGGTAAC-
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

E2F8/MA0865.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCTGGTAAC
TTTGGCGGGAAA-
A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:3
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------ATGGCTGGTAAC-
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

YY2/MA0748.2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGGCTGGTAAC
AGATGGCGGCG---
A C G T A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGGCTGGTAAC
TWGTCTGV----
C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATGGCTGGTAAC-----
NNNNCTGTTAACNNTNN
C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

E2F7/MA0758.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCTGGTAAC
TTTTGGCGGGAAAA
A C G T A C G T C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGGCTGGTAAC-
-TGGCGGGAAAHB
C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

RBPJ/MA1116.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATGGCTGGTAAC-
---CCTGGGAAAG
C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C A C G T
A C G T A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ATGGCTGGTAAC
--NGCTN-----
C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T