Information for 7-TTGAATGGCT (Motif 24)

A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T
Reverse Opposite:
C G T A A T C G G T A C A G T C C G T A A G C T A C G T G A T C C G T A T G C A
p-value:1e-7
log p-value:-1.639e+01
Information Content per bp:1.719
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif11.92%
Number of Background Sequences with motif1830.0
Percentage of Background Sequences with motif4.00%
Average Position of motif in Targets111.3 +/- 45.7bp
Average Position of motif in Background101.6 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTGAATGGCT-
NNNTTGAGTGGNNN
A C G T A C G T A C G T A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTGAATGGCT---
-TGATTGGCTANN
A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAATGGCT--
NNNNGTTGATTGGGTCG
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGAATGGCT
CTTGAGTGGCT
A C G T A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTGAATGGCT
NNTTGAGTGNN-
A C G T A C G T A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTGAATGGCT--
TTGATTRGRTTA
A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T A C G T A C G T
G A C T C G A T A C T G C G T A A C G T A C G T C T A G C T A G C T A G A G C T A G C T C G T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TTGAATGGCT---
ACTATGAATGAATGAT
A C G T A C G T A C G T A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

NFYC/MA1644.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTGAATGGCT
NCTGATTGGNN
A C G T A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTGAATGGCT
GTTAATGGCC
A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGAATGGCT
NCTGATTGGNN
A C G T A C G T G C A T C T A G T G C A T C G A C G A T C T A G C A T G T A G C A C G T
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T