Information for 5-CTAAATACTA (Motif 20)

A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A
Reverse Opposite:
A G C T G T C A A C T G A C G T C G T A A C G T A C G T A C G T C G T A A T C G
p-value:1e-4
log p-value:-1.084e+01
Information Content per bp:1.922
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets183.0 +/- 7.0bp
Average Position of motif in Background85.5 +/- 51.8bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD3/MA0912.2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTAAATACTA
CTAATTAC--
A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A
A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CTAAATACTA-
NNNCACTAATTANTNN
A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTAAATACTA
NDGTAATTAC--
A C G T A C G T A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A
T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C A C G T A C G T

PH0062.1_Hoxb7/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CTAAATACTA-
TNNCATTAATTANTNC
A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

PH0055.1_Hoxa7_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CTAAATACTA-
TNCCATTAATTACTNC
A C G T A C G T A C G T A C G T A C G T A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A A C G T
A C G T C A G T A T G C A G T C T G C A A C G T G C A T G T C A C G T A A C G T C A G T C G T A T G A C A C G T T G C A T G A C

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTAAATACTA-----
CATACAATACGAAATAA
A C G T A C G T A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

HOXB7/MA1501.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTAAATACTA
GNTAATTACC-
A C G T A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A
A T C G A G C T A G C T C G T A G T C A A C G T A C G T T C G A G T A C A G T C A C G T

HOXA2/MA0900.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAAATACTA
NTAATTAN--
A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A
A T G C A G C T C G T A C G T A A C G T A C G T C T G A A T G C A C G T A C G T

EMX1/MA0612.2/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAAATACTA
CTAATTAN--
A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A
A T G C A C G T G T C A C G T A A C G T A C G T C T G A T A C G A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTAAATACTA
NCTAATTA---
A C G T A T G C A C G T C G T A C G T A C G T A A C G T C G T A A G T C A C G T C T G A
T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T A C G T