Information for 3-AGTTCGAACC (Motif 18)

C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.424e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background132.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCGAACC---
AGNGTTCTAATGANN
A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTTCGAACC
NATTCAAAT-
C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCGAACC
AAAGTTCAT---
A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGTTCGAACC----
CGTATCGAAACCAAA
A C G T C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AGTTCGAACC----
NAAACCGGTTNNAACCGGTT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGTTCGAACC--
--TTTGAAACCG
C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

ZBTB12/MA1649.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGTTCGAACC-
ATCTGGAACCC
C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGTTCGAACC
ACATCAAAGG
C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

PB0013.1_Eomes_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCGAACC-----
NNTTTTCACACCTTNNN
A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX18/MA1565.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGTTCGAACC---
-NTTCACACCTCC
C G T A A C T G A C G T A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C