Information for 15-ATCCAAAGGATT (Motif 17)

C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C T G A C T G C G T A A C G T
p-value:1e-3
log p-value:-8.874e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATCCAAAGGATT
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

OTX2/MA0712.2/Jaspar

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:ATCCAAAGGATT----
----AAGGGATTAGAA
C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ATCCAAAGGATT---
-----VRGGATTARN
C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

POU5F1/MA1115.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATCCAAAGGATT
ATATGCAAATT---
A C G T A C G T C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATCCAAAGGATT-
-----NGGGATTA
C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PITX1/MA0682.2/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ATCCAAAGGATT--
------NGGATTAN
C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATCCAAAGGATT--
---AAGAGGATTAG
C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATCCAAAGGATT-------
--TGAAGGGATTAATCATC
C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATCCAAAGGATT----
NNTAAAAACGATGTTNT
A C G T C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ATCCAAAGGATT--
------RGGATTAR
C G T A A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G