Information for 17-ATCCATTTAG (Motif 32)

C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A C G T A A C G T A C T G A C T G C G T A A C G T
p-value:1e-2
log p-value:-6.885e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets130.0 +/- 0.0bp
Average Position of motif in Background102.1 +/- 70.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---ATCCATTTAG---
NNCATTCATTCATNNN
A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ATCCATTTAG-
-ANCGTTTANN
C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T
A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

BARHL1/MA0877.2/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATCCATTTAG
--NCGTTTAN
C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G
A C G T A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATCCATTTAG-
AACCAATTAAT
C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

PH0005.1_Barhl1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATCCATTTAG---
AACAACCAATTAATTC
A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCATTTAG-
ATAACCACTTAAA
A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATCCATTTAG----
CATAACCACTTAACAAC
A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATCCATTTAG----
CTTAACCACTTAAGGAT
A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATCCATTTAG
--BCMATTAG
C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G
A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ATCCATTTAG-
AAAAACCATTAAGG
A C G T A C G T A C G T C G T A A C G T A G T C A G T C C G T A A C G T A C G T A C G T C G T A A C T G A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G