Information for 13-ATTAGTCTAG (Motif 29)

C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C G T
p-value:1e-3
log p-value:-7.175e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background144.5 +/- 44.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ATTAGTCTAG-
---TGTCTAGA
C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G A C G T
A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGTCTAG--
NNAATTAGTCACGGT
A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATTAGTCTAG
--TWGTCTGV
C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PH0092.1_Lhx2/Jaspar

Match Rank:4
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------ATTAGTCTAG
NNNNNCTAATTAGTTTA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G
A T C G C A G T A C G T G T A C T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A G T A C G T G C T A A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATTAGTCTAG---
---TGTCTAGACA
C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATTAGTCTAG---
---TGTCTAGACG
C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

PH0174.1_Vax1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATTAGTCTAG
ACGTTAATTAACCCAG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTAGTCTAG
GCAATTAG-----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATTAGTCTAG
AGGTTAATTAGCTGAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

PH0033.1_Gbx1/Jaspar

Match Rank:10
Score:0.61
Offset:-8
Orientation:forward strand
Alignment:--------ATTAGTCTAG
TGCCACTAATTAGTGTA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G A C G T A G T C A C G T C G T A A C T G
G C A T C T A G A T G C T G A C T C G A G T A C G A C T G T C A C T G A A G C T A C G T C T G A A C T G A C G T A C T G A C G T G C T A A C G T