Information for 7-GAGGGGACACAC (Motif 12)

A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T T A C G A C G T A T C G A C G T T A G C A G T C A G T C A G T C A C G T A G T C
p-value:1e-8
log p-value:-1.848e+01
Information Content per bp:1.952
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.5 +/- 52.2bp
Average Position of motif in Background54.9 +/- 50.0bp
Strand Bias (log2 ratio + to - strand density)4.0
Multiplicity (# of sites on avg that occur together)3.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GAGGGGACACAC--
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

MAZ/MA1522.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGACACAC
GGGGAGGGGNN----
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C
T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAGGGGACACAC----
----GGACACACCCCC
A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGGGGACACAC----
AGCGGCACACACGCAA
A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZNF148/MA1653.1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAGGGGACACAC
GGGGGAGGGGNG----
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C
T A C G T A C G C T A G T C A G T A C G G T C A A T C G A T C G T A C G T A C G T A C G T C A G A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGGGGACACAC--
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGGGGACACAC--
-AGGTGNCAGACAG
A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGACACAC
GGAGGGGGAA---
A C G T A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGGGGACACAC-
-AGGTGHCAGACA
A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C A C G T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGGGGACACAC--
-AGGGGAATCCCCT
A C T G C G T A A C T G A C T G A C T G A C T G C G T A A T G C C G T A A G T C C G T A A G T C A C G T A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T