Information for 8-GTCTATSG (Motif 38)

A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
Reverse Opposite:
G T A C A T G C C G T A A C G T G T C A A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.167e+00
Information Content per bp:1.848
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif444.4
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets80.5 +/- 61.4bp
Average Position of motif in Background98.7 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATSG
RRTCAATA-
A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCTATSG
TGTCTAGA-
A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTATSG
TWGTCTGV--
A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTCTATSG---
CGTCTACACGGG
A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G A C G T A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCTATSG
VBSYGTCTGG--
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTATSG
CTGTCTGG--
A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTCTATSG----
GAGGTCAAAGGTCAC
A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GTCTATSG---
AGNGTTCTAATGANN
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCTATSG
NTGTCAN---
A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCTATSG
CCTGTCAA---
A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A C G A T A T C G A C T G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T