Information for 24-GATGTATAGGAA (Motif 27)

A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A C G T C G T A A C G T C G T A A G T C C G T A A C G T A G T C
p-value:1e-3
log p-value:-8.926e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background102.4 +/- 55.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BCL6/MA0463.2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATGTATAGGAA--
ATGCTTTCGAGGAATT
A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A C G T A C G T
G C T A G A C T C T A G G T A C G C A T A C G T G C A T A G T C A C T G G C T A C T A G A C T G C T G A C G T A G A C T C A G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GATGTATAGGAA
AGGACGCTGTAAAGGGA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

BCL6B/MA0731.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GATGTATAGGAA----
TGCTTTCTAGGAATTCA
A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGTATAGGAA
RTGATTKATRGN--
A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GATGTATAGGAA----
TCTTTCGAGGAATTTG
A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

ETV4/MA0764.2/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GATGTATAGGAA---
-----ACAGGAAGTG
A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G

ZBTB32/MA1580.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GATGTATAGGAA
--TGTACAGTAT
A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A
A C G T A C G T G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GATGTATAGGAA-
NNNCTTTCCAGGAAA
A C G T A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A A C G T
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GATGTATAGGAA
TGATTTATGGCC-
A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GATGTATAGGAA
TGATKGATGR---
A C G T A C T G C G T A A C G T A C T G A C G T C G T A A C G T C G T A A C T G A C T G C G T A C G T A
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T A C G T A C G T