Information for 4-AGAACWGTCCAA (Motif 4)

C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G A T C G G C T A G T A C C G T A A C T G C A G T A C G T T G A C C G A T
p-value:1e-5
log p-value:-1.261e+01
Information Content per bp:1.621
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif56.25%
Number of Background Sequences with motif5378.8
Percentage of Background Sequences with motif9.33%
Average Position of motif in Targets131.0 +/- 50.8bp
Average Position of motif in Background101.5 +/- 65.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AGAACWGTCCAA----
----NTGGCCAATGAG
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGAACWGTCCAA---
---ACTAGCCAATCA
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AGAACWGTCCAA----
------AGCCAATCGG
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

ZNF449/MA1656.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAACWGTCCAA----
--CCAAGCCCAACCAG
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGAACWGTCCAA-
----CGTGCCAAG
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGAACWGTCCAA--
----GGTGCCAAGT
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAACWGTCCAA---
GGCAAAAGTCCAATAA
A C G T C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NFYC/MA1644.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGAACWGTCCAA-----
------AGCCAATCAGA
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGAACWGTCCAA-----
------AACCAATCAGA
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

TEAD4/MA0809.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAACWGTCCAA-
-CCACATTCCAGG
C G T A A C T G T G C A G C T A T A G C G C A T C A T G C G A T T A G C G T A C G T C A C G T A A C G T
A C G T G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G