Information for 6-CAAACGACAC (Motif 21)

A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-8.355e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background140.0 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAAACGACAC
NAAACCACAG
A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAACGACAC-
-AAACCACANN
A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAAACGACAC
TTTGCACACGGCAC
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAAACGACAC---
ATAAACCGAAACCAA
A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAAACGACAC---
CAAAATCGAAACTAA
A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAACGACAC--
NWAACCACADNN
A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAACGACAC-
-AAACCACAGC
A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAACGACAC--
-AAACCACAGAN
A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PH0164.1_Six4/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAACGACAC------
ATAAATGACACCTATCA
A C G T A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAAACGACAC-
TTAAAGGTCAAA
A C G T A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C C G T A A G T C A C G T
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A