Information for 1-TADTGATGAGHA (Motif 1)

A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A
Reverse Opposite:
A G C T C A T G A G T C A C G T G T A C G T C A A C G T G T A C C G T A G C T A A C G T G T C A
p-value:1e-5
log p-value:-1.374e+01
Information Content per bp:1.742
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif548.2
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets65.5 +/- 37.2bp
Average Position of motif in Background98.9 +/- 74.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TADTGATGAGHA
--ATAATGAGGT
A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A
A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TADTGATGAGHA---
TAATGATGATCACTA
A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A A C G T A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TADTGATGAGHA
--NTAATGAGCT
A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TADTGATGAGHA-
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TADTGATGAGHA---
GACGATAATGAGCTTGC
A C G T A C G T A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PB0022.1_Gata5_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TADTGATGAGHA---
TAAACTGATAAGAAGAT
A C G T A C G T A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TADTGATGAGHA---
TATAGAGATAAGAATTG
A C G T A C G T A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

HOXD3/MA0912.2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TADTGATGAGHA
--GTAATTAG--
A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A
A C G T A C G T T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G A C G T A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TADTGATGAGHA
-NTTAATTACN-
A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A
A C G T A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TADTGATGAGHA
-NNAGATTAGAN
A C G T G T C A C A G T A C G T A C T G C G T A A C G T A C T G C G T A A C T G G A T C C T G A
A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A