Information for 5-GGCCCTACATGA (Motif 7)

A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C T G A C G T C G T A A C T G A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-9.153e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background142.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCCCTACATGA
GGCCATAAATCA
A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCTACATGA--
TGWCCTCARNTGACC
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A A C G T A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

RORC/MA1151.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGCCCTACATGA
TGACCTANTTAN
A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCTACATGA
TGGGGCCCAC----
A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCCCTACATGA---
TGNCCATATATGGTCA
A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

Plagl1/MA1615.1/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGCCCTACATGA
NNTGGCCCCAGNN--
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G A C G T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCCCTACATGA------
-AAAATACATGTAATACT
A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

ZNF449/MA1656.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCCCTACATGA
CCAAGCCCAACCAG-
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G A C G T

MXI1/MA1108.2/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCCCTACATGA-
---GACACATGGC
A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCCCTACATGA
TGACCTARTT--
A C T G A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C G T A C T G C G T A
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T