Information for 7-GGKATCAG (Motif 33)

A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C G T G T A C A G T C A G T C
p-value:1e-5
log p-value:-1.161e+01
Information Content per bp:1.946
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif406.1
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets103.3 +/- 59.5bp
Average Position of motif in Background99.5 +/- 60.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----GGKATCAG----
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----GGKATCAG----
GATGGGGTATCATTTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----GGKATCAG----
AATAGGGTATCAATATT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----GGKATCAG----
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGKATCAG----
AATAGGGTATCAATTAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

Spz1/MA0111.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGKATCAG-
AGGGTAACAGC
A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGKATCAG----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.73
Offset:-5
Orientation:forward strand
Alignment:-----GGKATCAG----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGKATCAG
NGGATTAN
A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

OTX2/MA0712.2/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGKATCAG--
AAGGGATTAGAA
A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A