Information for 4-CGGTGTCG (Motif 44)

A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C C G T A A G T C A G T C A C T G
p-value:1e-2
log p-value:-5.734e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif14.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets22.0 +/- 0.0bp
Average Position of motif in Background121.4 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CGGTGTCG----
GCGGAGGTGTCGCCTC
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CGGTGTCG-----
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CGGTGTCG-----
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

IRF5/MA1420.1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGTCG-
AGTTTCGGTTTCGG
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T
T C G A A C T G C A G T G C A T A C G T A G T C C T A G C T A G G A C T C G A T G C A T G T A C T C A G C T A G

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGGTGTCG-----
TNTGGTTTCGATACN
A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGGTGTCG-
GAGGTGTGAA
A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A

PB0035.1_Irf5_1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGTCG------
NTGGTTTCGGTTNNN
A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

IRF4/MA1419.1/Jaspar

Match Rank:8
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CGGTGTCG-
TAGTTTCGGTTTCGG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T
G C A T C T G A A T C G C A G T G C A T A C G T A G T C C T A G T A C G C G A T G C A T C A G T A G T C C T A G C T A G

IRF8/MA0652.1/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGTCG-
AGTTTCGGTTTCGN
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGTGTCG
AGGTGTCA
A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C T G
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A