| p-value: | 1e-4 |
| log p-value: | -9.476e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 1.3 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 50.0 +/- 0.0bp |
| Average Position of motif in Background | 76.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORA/MA0071.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TTTCTTGGTCAC -ATCAAGGTCA- |
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HOXA13/MA0650.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTCTTGGTCAC GTTTTATTGGN--- |
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Stat5a/MA1624.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTCTTGGTCAC NNTTCTTGGAAN- |
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PB0158.1_Rfx3_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TTTCTTGGTCAC------- ACTGACCCTTGGTTACCACAAAG |
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RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTTCTTGGTCAC--- AAWCTAGGTCARDNN |
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PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTTCTTGGTCAC--- TACCCTAGTTACCGA |
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PB0133.1_Hic1_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTCTTGGTCAC---- NNNNTTGGGCACNNCN |
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HOXB13/MA0901.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTTCTTGGTCAC NNATTTTATTGGNN-- |
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ESRRA/MA0592.3/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTTCTTGGTCAC- GCTCAAGGTCACA |
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PAX5/MA0014.3/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | TTTCTTGGTCAC---- ----NNGGTCACGCTC |
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