Information for 25-TCACAGGACTCA (Motif 40)

A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C G T A G T C A G T C A C G T A C T G A C G T A C T G C G T A
p-value:1e-2
log p-value:-6.599e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background114.5 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1/MA0093.3/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCACAGGACTCA
NNGTCACATGACNN-
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A A C G T

USF2/MA0526.3/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TCACAGGACTCA
NNGTCACATGACNN-
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCACAGGACTCA
GTCACATGAY---
A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCACAGGACTCA--
---CATGACTCATC
A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

PKNOX2/MA0783.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCACAGGACTCA
TGACAGGTGTCA
A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

JDP2/MA0655.1/Jaspar

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TCACAGGACTCA-
----ATGACTCAT
A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

JUNB/MA0490.2/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCACAGGACTCA---
--AAATGACTCATTT
A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C T G A T C G A G A C T C A T G C G T A A T G C C G A T G T A C C T G A A G C T G C A T G C A T

FOSL1/MA0477.2/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCACAGGACTCA---
--TGATGACTCATCC
A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C G A G A C T C A T G G C T A A T G C C G A T G T A C C T G A A G C T G A T C G A T C

JUND/MA0491.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TCACAGGACTCA---
--TGATGACTCATCC
A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C G A G A C T C A T G G C T A A T G C C G A T G T A C C T G A A G C T G T A C G A T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCACAGGACTCA
GTCACGTGACYV-
A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C T G C G T A A G T C A C G T A G T C C G T A
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C A C G T