Information for 1-TWGKAGAGAATR (Motif 1)

A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G
Reverse Opposite:
A G T C C G T A G A C T C A G T G T A C A G C T A G T C C G A T T G C A A G T C G C T A C T G A
p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.667
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif80.00%
Number of Background Sequences with motif6376.6
Percentage of Background Sequences with motif8.02%
Average Position of motif in Targets120.5 +/- 50.4bp
Average Position of motif in Background100.4 +/- 84.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TWGKAGAGAATR-
ATTTGCATACAATGG
A C G T A C G T A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TWGKAGAGAATR--
-----GACAATGNN
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TWGKAGAGAATR
--GCAGTGATTT
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

DPRX/MA1480.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TWGKAGAGAATR--
----AGATAATCCC
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TWGKAGAGAATR
----AGATAASR
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G
A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TWGKAGAGAATR--
----AGATAAGANN
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TWGKAGAGAATR
-AGGTGTTAAT-
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----TWGKAGAGAATR
NNNTTAGGTAGCNTNT-
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TWGKAGAGAATR
-NGAAGC-----
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TWGKAGAGAATR----
-CTCACACAATGGCGC
A G C T C G A T A C T G A C G T C G T A A C T G C T G A A C T G G C T A C G T A A C G T T C A G A C G T A C G T A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C