Information for 1-GCAACGTGCG (Motif 7)

A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C T G A G T C
p-value:1e-4
log p-value:-9.592e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GCAACGTGCG-
-GTACGTGCCC
A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C G T
A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCAACGTGCG
GGGTACGTGC-
A C G T A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T

MYC/MA0147.3/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCAACGTGCG-
GGCCACGTGCCC
A C G T A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C G T
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCAACGTGCG
-RTACGTGC-
A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCAACGTGCG
-GGACGTGC-
A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCAACGTGCG
--TACGTGCV
A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HEY2/MA0649.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCAACGTGCG
GACACGTGCC
A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C

RFX7/MA1554.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCAACGTGCG
NTAGCAACG----
A C G T A C G T A C G T A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCAACGTGCG
GCCACGTGT-
A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCAACGTGCG
NCCACGTG--
A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C T G
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T