Information for 3-AGAGAGTGTGAT (Motif 4)

C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A G T A C C G T A A G T C A C G T G T A C A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets80.8 +/- 46.3bp
Average Position of motif in Background88.2 +/- 95.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGTGTGAT
RHHCAGAGAGGB----
A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGTGTGAT
TCAGNGAGCGTGAC
A C G T A C G T C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

PRDM1/MA0508.3/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGTGTGAT
NAGAGAAAGNA--
A C G T C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGAGAGTGTGAT
GAAAGTGAAAGT---
A C G T A C G T A C G T C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGAGAGTGTGAT
---AGGTGTGA-
C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGTGTGAT---
NNGCGTGTGTGCNGCN
A C G T C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAGAGTGTGAT
---NNNANTGA-
C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAGAGTGTGAT---
--AAGGTGTGAAAAT
C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAGAGTGTGAT
--ATGGGGTGAT
C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGAGAGTGTGAT
--AAGGTGTGAA
C G T A C T A G C G T A A C T G C G T A A C T G C G A T A C T G A C G T A C T G G T C A A C G T
A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A