Information for 1-CCGTGCTGCA (Motif 7)

A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T C T A G A G T C C G T A A C T G A G T C C G T A A G T C A C T G A C T G
p-value:1e-12
log p-value:-2.886e+01
Information Content per bp:1.969
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.7 +/- 27.7bp
Average Position of motif in Background124.9 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCGTGCTGCA---
---TGCSGCANTN
A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGCTGCA
NNCCTGCTGNG
A C G T A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

ZFP57/MA1583.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGTGCTGCA----
-NNTGCGGCAANNN
A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCGTGCTGCA-
-NATGTTGCAA
A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

Zic2/MA1629.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGCTGCA--
CCCCCTGCTGTGNN
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGCTGCA
CCCCCTGCTGTG
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGTGCTGCA---
TCNCCTGCTGNGNNN
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

HIF1A/MA1106.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGTGCTGCA
GTACGTGCCC--
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGTGCTGCA
GGACGTGC----
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGTGCTGCA
RTACGTGC----
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C T G A G T C C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T