Information for 8-TGAGTATTTTGC (Motif 9)

A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A G T C A C G T A G T C C G T A
p-value:1e-3
log p-value:-8.828e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGAGTATTTTGC-----
--ANATTTTTGCAANTN
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTATTTTGC
TTAAGTGCTT---
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAGTATTTTGC
ATGAATATTC---
A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGAGTATTTTGC-
NATTTAAGTACTTANNA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGAGTATTTTGC
TGTTTAYTTAGC
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAGTATTTTGC
TGTGGATTNNN-
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T

MAFF/MA0495.3/Jaspar

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGAGTATTTTGC-
AAGTCAGCATTTTTTT
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T
C T G A C G T A T A C G C G A T G T A C C G T A C A T G A G T C C G T A C G A T G C A T G C A T G C A T G C A T G C A T G C A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGAGTATTTTGC
NNTGTGGATTSS--
A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGAGTATTTTGC-
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

POL007.1_BREd/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGAGTATTTTGC
---GTTTGTT--
A C G T A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T