Information for 3-AGTGCGGGAGAC (Motif 3)

C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
Reverse Opposite:
A C T G A C G T A T G C A C G T A G T C A G T C G T A C A T C G A T G C C G T A A G T C A C G T
p-value:1e-6
log p-value:-1.385e+01
Information Content per bp:1.805
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif162.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets67.5 +/- 39.6bp
Average Position of motif in Background99.1 +/- 83.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Wt1/MA1627.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCGGGAGAC-
GNGTGGGGGAGGNG
A C G T C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C A C G T
T C A G A C G T T A C G G A C T T A C G C A T G T C A G T C A G T A C G G T C A A T C G C A T G T C A G C T A G

Znf281/MA1630.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGTGCGGGAGAC
GGTGGGGGAGG-
C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G A C G T

POL011.1_XCPE1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGTGCGGGAGAC
-GGGCGGGACC-
C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCGGGAGAC
VTGYGKGGGAGK-
A C G T C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTGCGGGAGAC
AGGTGHCAGACA-
A C G T C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGTGCGGGAGAC
GRTGMTRGAGCC
C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGTGCGGGAGAC
TTRAGTGSYK-----
A C G T A C G T A C G T C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCGGGAGAC
NTCAAGTGG-------
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AGTGCGGGAGAC
NTCAAGTGGN------
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGTGCGGGAGAC
AGGTGNCAGACAG
A C G T C G T A A C T G A C G T A T C G A T G C A C T G C T A G A C T G C G T A A T C G G T C A G T A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G