Information for 2-AAGCATAGCG (Motif 7)

C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T C G T A A C G T A C T G A G T C A C G T A C G T
p-value:1e-3
log p-value:-9.097e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets166.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGCATAGCG-
AAGGATATNTN
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGCATAGCG
CAAGCTT----
A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCATAGCG
AAATCACTGC-
A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCATAGCG
AAATCACAGCA
A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGCATAGCG
AAACCACAGC-
A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGCATAGCG
GCTAAAAATAGC-
A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T

GFI1/MA0038.2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAGCATAGCG
CAAATCACTGCA
A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

YY2/MA0748.2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAGCATAGCG---
--AGATGGCGGCG
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGCATAGCG
ATTTGCATA---
A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGCATAGCG
DCYAAAAATAGM-
A C G T A C G T A C G T C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A G T C A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T