Information for 21-TTGACATTCAGA (Motif 29)

A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C G T A G T C C G T A C G T A
p-value:1e-3
log p-value:-8.240e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background184.5 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTGACATTCAGA----
GACCACATTCATACAAT
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Esrrg/MA0643.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTGACATTCAGA
ATGACCTTGA--
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTGACATTCAGA-
CTTTGTTATGCAAAT
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTGACATTCAGA
TTGACAG-----
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGACATTCAGA
SCTGTCAVTCAV-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTGACATTCAGA-----
---ACATTCATGACACG
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTGACATTCAGA
NATGACCTTGA--
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGACATTCAGA
TTGACAGG----
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGACATTCAGA
YTGWCADY----
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T

ESRRA/MA0592.3/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGACATTCAGA
NNTGACCTTGANN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C