Information for 15-GTTCAACTAC (Motif 33)

A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C G T A C G T A C T G C G T A C G T A A G T C
p-value:1e-2
log p-value:-6.889e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background146.1 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTTCAACTAC
TGAGTTCA-----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GTTCAACTAC
CAAAGKTCAA----
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTTCAACTAC-
-ACCAACTGTC
A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTCAACTAC---
GGGGTCAATGACCTN
A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A T G C T C G A G C T A A G C T T C A G T C G A G T A C G T A C A G C T A G T C

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTTCAACTAC
AAAGTTCAT----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GTTCAACTAC
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

MYBL2/MA0777.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTTCAACTAC-
AACCGTTAAACGGTC
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTTCAACTAC-
AGGTCAAGGTCA
A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTTCAACTAC-
-GTTAACTAGN
A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTTCAACTAC-----
CGACCAACTGCCATGC
A C G T A C T G A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C