Information for 2-TGGATCGTAC (Motif 9)

A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A C T G C G T A A C G T A G T C A G T C C G T A
p-value:1e-3
log p-value:-8.720e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets176.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGATCGTAC--
TGGAATGTACCA
A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C A C G T A C G T
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGATCGTAC
GTGGAT-----
A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGATCGTAC-----
TCTTTGGCGTACCCTAA
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PH0067.1_Hoxc12/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGATCGTAC------
TTAGGTCGTAAAATTTC
A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGATCGTAC
NGGATTAN--
A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

TEAD4/MA0809.2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGGATCGTAC
NCTGGAATGTNN
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G

TEAD1/MA0090.3/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGGATCGTAC
NNCTGGAATGTNN
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGGATCGTAC
CGTGGGTGGTCC
A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGGATCGTAC---
--GGTCGTAAAAA
A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGGATCGTAC---
--GGTCGTAAAAT
A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T