Information for 19-ACACAATTTTGT (Motif 36)

C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C T G A C G T
p-value:1e-3
log p-value:-7.679e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background97.7 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----ACACAATTTTGT
NNCNNAACAATTNT--
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----ACACAATTTTGT-
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACACAATTTTGT
CTCACACAATGGCGC
A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACACAATTTTGT
GTAAACAAT-----
A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACACAATTTTGT
-GACAATGNN--
C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACACAATTTTGT
NAACAAT-----
C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ACACAATTTTGT
CGAAGCACACAAAATA--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----ACACAATTTTGT
NNTNANAACAATTNNA-
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.57
Offset:-9
Orientation:reverse strand
Alignment:---------ACACAATTTTGT-
NNCNNNCNCANACAATTAGNAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ACACAATTTTGT
TTAAGAACAATAAATT
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T