Information for 5-GCTGAGCT (Motif 12)

A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A G T C C G T A A C T G G T A C
p-value:1e-5
log p-value:-1.368e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif46.15%
Number of Background Sequences with motif1902.2
Percentage of Background Sequences with motif3.05%
Average Position of motif in Targets73.8 +/- 50.0bp
Average Position of motif in Background99.5 +/- 79.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGCT
CCTGCTGAGH-
A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGCT--
TGCTGTGATTT
A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTGAGCT--
GCAGTGATTT
A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T A C G T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGCT-
AAAWWTGCTGACWWD
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGCT-
NNTCCTGCTGTGNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTGAGCT
GCTGTG--
A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAGCT
AAAATGCTGACT-
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGCT
NGCTN----
A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGCT-
TGCTGACTCA
A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T A C G T
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGCT-
TCNCCTGCTGNGNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G G T A C A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G