Information for 18-CTGAGGSTGAAG (Motif 23)

G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G
Reverse Opposite:
G T A C C G A T A G C T A G T C C G T A A T C G A G T C A G T C C G A T A G T C C G T A C T A G
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.714
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif33.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets77.2 +/- 48.5bp
Average Position of motif in Background109.4 +/- 48.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)2.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CTGAGGSTGAAG--
SMCAGTCWGAKGGAGGAGGC
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

TFAP2A/MA0003.4/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGGSTGAAG
NNGCCTGAGGCANN--
A C G T A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTGAGGSTGAAG
GGGCCTGAGGCGGG--
A C G T A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G A C G T A C G T

MAFK/MA0496.3/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGGSTGAAG
NNTGCTGAGTCAGCN-
A C G T A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G
C G T A C G A T C A G T A T C G T G A C G C A T C A T G C G T A T A C G A C G T T G A C C G T A A C T G A T G C C G T A A C G T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGGSTGAAG
NNNANTGA--------
A C G T A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGAGGSTGAAG
GCTGASTCAGCA-
A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:7
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------CTGAGGSTGAAG-
RAAWNTGCTGASTCAGCANW
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G A C G T
C T G A C G T A C G T A C G T A G A T C C G A T T A C G G T A C G C A T C A T G C G T A A T G C G C A T G T A C C G T A C A T G A T G C G C T A C T G A G C A T

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGAGGSTGAAG
NAGAAACAGNN-
G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGGSTGAAG-----
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGGSTGAAG-----
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C G T G A T C G C A T C T A G C G T A C T A G C T A G T A G C C G A T A C T G C T G A C G T A C A T G A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A