Information for 2-CTTCTGMACWTC (Motif 3)

A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
Reverse Opposite:
A C T G C T G A C G T A A C T G A C G T A C G T G T A C C G T A A C T G G T C A C G T A A C T G
p-value:1e-17
log p-value:-3.987e+01
Information Content per bp:1.827
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets156.9 +/- 19.4bp
Average Position of motif in Background44.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTCTGMACWTC
NNGCTTCTGTNN---
A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTCTGMACWTC
GCTTCC-------
A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTTCTGMACWTC
NNCCTGCTGNG----
A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTTCTGMACWTC
ANCAGCTG------
A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTTCTGMACWTC
NNNNTTTCTGGAGNN-
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTTCTGMACWTC-
GTCWGCTGTYYCTCT
A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C A C G T
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T

VDR/MA0693.2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTTCTGMACWTC
----TGAACTCA
A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

NR1I3/MA1534.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTTCTGMACWTC
---ATGAACTTT
A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
A C G T A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CTTCTGMACWTC
CNNNGCTACTGTANNN-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTTCTGMACWTC
CCCCCTGCTGTGNN--
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A G T C C G A T A C T G G T C A C G T A G T A C G C A T A G C T A G T C
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G A C G T A C G T