| p-value: | 1e-4 |
| log p-value: | -1.071e+01 |
| Information Content per bp: | 1.950 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.36% |
| Number of Background Sequences with motif | 3.3 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 91.4 +/- 63.5bp |
| Average Position of motif in Background | 107.5 +/- 73.9bp |
| Strand Bias (log2 ratio + to - strand density) | 2.6 |
| Multiplicity (# of sites on avg that occur together) | 2.33 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORC/MA1151.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATCACCTATATA- -TGACCTANTTAN |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATCACCTATATA NTGACCTAATT- |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATCACCTATATA-- TTGACCTANTTATN |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATCACCTATATA -TGACCTARTT- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATCACCTATATA -TGACCTARTT- |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATCACCTATATA -TGACCTTGAT- |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATCACCTATATA NNHYTGACCTAGWTT |
|
|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATCACCTATATA BTGACCTAVTTW |
|
|
|
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATCACCTATATA TGACACCT----- |
|
|
|
FIGLA/MA0820.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATCACCTATATA ACCACCTGTT-- |
|
|
|