Information for 3-RWCAGCMARTGM (Motif 4)

C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C
Reverse Opposite:
A C T G A T G C G T C A A G C T A C G T A C G T A C T G A G T C A C G T A C T G C G A T A G C T
p-value:1e-6
log p-value:-1.489e+01
Information Content per bp:1.820
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif54.9
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets89.3 +/- 71.2bp
Average Position of motif in Background101.5 +/- 75.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ELF1/MA0473.3/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-RWCAGCMARTGM-
AAACAGGAAGTGGG
A C G T C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C A C G T
C T G A C T G A T G C A T A G C T G C A A T C G C T A G T G C A C G T A T C A G C G A T T C A G T C A G T A C G

GABPA/MA0062.3/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-RWCAGCMARTGM-
NNACAGGAAGTGNN
A C G T C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C A C G T
C T G A T C G A T C G A T A G C G T C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C A G T C A G

ETV1/MA0761.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-RWCAGCMARTGM-
AAACAGGAAGTGAA
A C G T C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C A C G T
C T G A T C G A T C G A T A G C T G C A A C T G C A T G T G C A G C T A T C A G G A C T C T A G T C G A T C G A

EHF/MA0598.3/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RWCAGCMARTGM-
NNAACAGGAAGTGNN
A C G T A C G T C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C A C G T
T C A G C T G A C G T A T G C A T A G C T G C A C A T G C T A G T G C A C G T A T C A G G A C T C T A G T C G A T A C G

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----RWCAGCMARTGM
NCTANGTCAGCAAATTT
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:RWCAGCMARTGM
ACTAGCCAATCA
C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:RWCAGCMARTGM
-ACAGGAAGTG-
C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

ZNF341/MA1655.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---RWCAGCMARTGM
GGGAACAGCCAC---
A C G T A C G T A C G T C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RWCAGCMARTGM
NACAGGAAAT--
C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:RWCAGCMARTGM-
-NTGGCCAATGAG
C T G A C G A T A G T C C G T A A C T G A G T C G T A C C G T A T C G A A C G T A T C G G T A C A C G T
A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G