Information for 1-ATTCACGCAC (Motif 5)

C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A C T G A C G T A C T G C G T A C G T A A C G T
p-value:1e-3
log p-value:-9.152e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background144.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:ATTCACGCAC
---CACGCA-
C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:ATTCACGCAC
TBGCACGCAA
C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

TCFL5/MA0632.2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATTCACGCAC--
--TCACGCGCAC
C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A G T C C T G A A G T C C T A G G A T C T C A G T A G C G T C A G T A C

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------ATTCACGCAC-
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PAX6/MA0069.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATTCACGCAC-----
-TTCACGCATGAGTT
C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTCACGCAC--
ACATTCATGACACG
A C G T A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

TFDP1/MA1122.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTCACGCAC
NNTTCCCGCCN
A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C
A T G C A T G C A C G T G A C T T A G C A T G C A T G C C T A G A T G C A T G C A T G C

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATTCACGCAC
NNGGTCACGCTC
A C G T A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATTCACGCAC--
--GCACGTACCC
C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C G T A C G T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTCACGCAC
--GCACGTNC
C G T A A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C