Information for 15-CAACCAATCC (Motif 30)

A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.033e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background139.2 +/- 113.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAACCAATCC--
-AACCAATCAGA
A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAACCAATCC--
-AGCCAATCAGA
A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A C G T
A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAACCAATCC
ACTAGCCAATCA
A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAACCAATCC-
-AGCCAATCGG
A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CAACCAATCC
CCAATCAA---
A C G T A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAACCAATCC
HNRAATCAAT--
A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAACCAATCC---
-NNCTAATCCCNN
A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAACCAATCC
-NAACAAT--
A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C
A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:9
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAACCAATCC-
---CTAATCCC
A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAACCAATCC-----
NNNAATTAATCCCCNCN
A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T