Information for 8-AAAACCCYAAAA (Motif 13)

C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
Reverse Opposite:
A C G T A G C T A G C T C G A T C T A G C T A G C A T G C A T G C G A T C G A T A G C T C G A T
p-value:1e-8
log p-value:-1.984e+01
Information Content per bp:1.731
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.85%
Number of Background Sequences with motif136.9
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets119.4 +/- 47.4bp
Average Position of motif in Background101.3 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAACCCYAAAA
AAAACCTCAAAT
C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAAACCCYAAAA
GGAAATCCCC----
A C G T A C G T C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T

Prdm15/MA1616.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AAAACCCYAAAA
AGGAAAACCTGGAGC
A C G T A C G T A C G T C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAACCCYAAAA
-AAACCGCAA--
C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAAACCCYAAAA
GGAAANCCCC----
A C G T A C G T C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAACCCYAAAA----
AGAGCCATAAAATTCG
C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A A C G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAAACCCYAAAA
-AAACCACANN-
C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAAACCCYAAAA
GGGAAATCCCCN---
A C G T A C G T A C G T C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T

MZF1/MA0056.2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAAACCCYAAAA
CAAATCCCCACTT
A C G T C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AAAACCCYAAAA
GGAAATTCCC----
A C G T A C G T C G T A C T G A C G T A G C T A G T A C G T A C G A T C G A C T G C T A C T G A T C G A T G C A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T