Information for 25-CCAGTTAGGATG (Motif 42)

A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C A G T C A C G T C G T A C G T A A G T C A C G T A C T G A C T G
p-value:1e-1
log p-value:-3.177e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.0 +/- 51.7bp
Average Position of motif in Background137.2 +/- 49.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)10.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCAGTTAGGATG-----
-CTACTAGGATGTNNTN
A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PH0089.1_Isx/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCAGTTAGGATG
ACNNCTAATTAGNNNN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCAGTTAGGATG
BCMATTAG----
A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAGTTAGGATG
ACCACTTAA----
A C G T A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

LBX2/MA0699.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAGTTAGGATG
GCCAATTAGC---
A C G T A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
T C A G A G T C G A T C T G C A T G C A A C G T A C G T C G T A C T A G T A G C A C G T A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGTTAGGATG
AACCAATTAAT---
A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAGTTAGGATG
CCAATTAA----
A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGTTAGGATG
TGGCAGTTGG----
A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCAGTTAGGATG
BRRCVGTTDN----
A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCAGTTAGGATG
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C T G
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C