Information for 19-AACTAATGCA (Motif 31)

C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T
p-value:1e-3
log p-value:-7.189e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background105.8 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AACTAATGCA-
NNCTAATGGNN
C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AACTAATGCA
GTTAACTAGN---
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AACTAATGCA-
-GCTAATCCCC
C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PH0028.1_En1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AACTAATGCA---
GCGAACTAATTAATGC
A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AACTAATGCA----
---ATATGCAAATT
C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

PITX1/MA0682.2/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AACTAATGCA
--CTAATCCC
C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

OTX2/MA0712.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AACTAATGCA--
NNCTAATCCCNN
C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

Arx/MA0874.1/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AACTAATGCA
GTCCATTAATTAATGGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A
T C A G A C G T A T G C T G A C C T G A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T C A T G A T C G G C T A

PH0003.1_Arx/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AACTAATGCA
GTCCATTAATTAATGGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A
T C A G A C G T A T G C T G A C C T G A A G C T G A C T C G T A C G T A G A C T C G A T C T G A C T G A G A C T C A T G A T C G G C T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AACTAATGCA--
--MTGATGCAAT
C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T