Information for 5-GAGACCGAAT (Motif 11)

A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C A C T G A C T G A C G T A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.819e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF5/MA1420.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GAGACCGAAT--
CCGAAACCGAAACT
A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

IRF4/MA1419.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGACCGAAT---
CCGAAACCGAAACTA
A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A

IRF8/MA0652.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGACCGAAT--
TCGAAACCGAAACT
A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGACCGAAT
GAGSCCGAGC
A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

IRF9/MA0653.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGACCGAAT--
AACGAAACCGAAACT
A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GAGACCGAAT
CTACTTGGATACGGAAT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

IRF3/MA1418.1/Jaspar

Match Rank:7
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------GAGACCGAAT---
GGGAAACGGAAACCGAAACTG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T A C G T A C G T
T A C G T A C G C T A G C T G A C T G A G C T A G T A C A T C G C T A G T C G A C T G A C G T A A T G C A T G C C T A G T G C A G C T A G C T A T A G C A G C T C T A G

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GAGACCGAAT-
CTGATCGAAACCAAAGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAGACCGAAT--
ACGAAAGCGAAAGT
A C G T A C G T A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGACCGAAT--
GAAACTGAAACT
A C T G C G T A A C T G C G T A A G T C A G T C A C T G C G T A C G T A A C G T A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T