Information for 3-AATAAGCTTCAT (Motif 3)

C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T
p-value:1e-13
log p-value:-3.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.5 +/- 35.5bp
Average Position of motif in Background73.9 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AATAAGCTTCAT
--CAAGCTT---
C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATAAGCTTCAT
NTAATGAGCT----
A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AATAAGCTTCAT
-----GCTTCC-
C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AATAAGCTTCAT
GACGATAATGAGCTTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATAAGCTTCAT
AAGATATCCTT---
A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AATAAGCTTCAT--
NTTATTCGTCATNC
C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

POU3F3/MA0788.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AATAAGCTTCAT
AAATTAGCATAAT
A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AATAAGCTTCAT
AAACATAATGAGGTTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T

Crx/MA0467.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AATAAGCTTCAT
-CTAATCCTCTT
C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AATAAGCTTCAT
TAGGTAATAAAATTCA-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A A C G T