Information for 4-AHGTCMKTGCAA (Motif 5)

C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A
Reverse Opposite:
A C G T A C G T A C T G A T G C G C T A T G C A C A G T C A T G T G C A G A T C C A T G A C G T
p-value:1e-4
log p-value:-1.014e+01
Information Content per bp:1.598
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif623.1
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets86.3 +/- 52.6bp
Average Position of motif in Background99.0 +/- 71.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AHGTCMKTGCAA----
AATCGCACTGCATTCCG
A C G T C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AHGTCMKTGCAA--
--GGGATTGCATNN
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AHGTCMKTGCAA---
ANATTTTTGCAANTN
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

RFX1/MA0509.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AHGTCMKTGCAA---
-TNCCATAGCAACNN
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T A C G T
A C G T G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

NR1H4/MA1110.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AHGTCMKTGCAA
NAGGTCATTGA--
A C G T C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AHGTCMKTGCAA----
------TTGCAACATN
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AHGTCMKTGCAA-----
NNGTATGTGCACATNNN
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AHGTCMKTGCAA---
---SCCTAGCAACAG
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

RFX3/MA0798.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AHGTCMKTGCAA---
-TNCCATAGCAACNN
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A A C G T A C G T A C G T
A C G T G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AHGTCMKTGCAA
-TGACCTTGAN-
C G T A G T A C C A T G A C G T G A T C G T C A A C G T C G A T A T C G T A G C T C G A G T C A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T