Information for 12-GCACGGGTGC (Motif 24)

A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C G T C A A G T C A G T C A T G C A C T G A C G T A C T G A G T C
p-value:1e-7
log p-value:-1.692e+01
Information Content per bp:1.919
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets78.9 +/- 46.4bp
Average Position of motif in Background93.5 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCACGGGTGC-
-CACGTGTGCH
A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C A C G T
A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

MYOD1/MA0499.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCACGGGTGC--
NNGACAGGTGCNN
A C G T A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C A C G T A C G T
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G

SNAI2/MA0745.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCACGGGTGC--
NNGACAGGTGCNN
A C G T A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C A C G T A C G T
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCACGGGTGC-----
ATCCACAGGTGCGAAAA
A C G T A C G T A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

HES6/MA1493.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCACGGGTGC
GGCACGTGTT-
A C G T A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCACGGGTGC
GCACGTGT--
A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCACGGGTGC-
-AACAGGTGCA
A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C A C G T
A C G T C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCACGGGTGC
GGCACGTGTC-
A C G T A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCACGGGTGC--
NNACAGGTGTNN
A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C A C G T A C G T
C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T

Rbpjl/MA1621.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCACGGGTGC---
NNNACAGGTGTNNN
A C G T A C T G A G T C G T C A A G T C A T C G A C T G C T A G A C G T A C T G A G T C A C G T A C G T A C G T
T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G