| p-value: | 1e-4 |
| log p-value: | -9.244e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 0.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 46.0 +/- 0.0bp |
| Average Position of motif in Background | 99.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGCCAGGCCAAC- TTGCCATGGCAACN |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGCCAGGCCAAC- TTGCCATGGCAACC |
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|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TGCCAGGCCAAC CGGTTGCCATGGCAAC |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGCCAGGCCAAC- GTTGCCATGGCAACM |
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|
|
RFX3/MA0798.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TGCCAGGCCAAC-- TNCCATAGCAACNN |
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|
|
ZNF449/MA1656.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TGCCAGGCCAAC--- -CCAAGCCCAACCAG |
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|
|
RFX5/MA0510.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TGCCAGGCCAAC- NGTTGCCATGGCAACG |
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|
|
CREB3L1/MA0839.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGCCAGGCCAAC- ATGCCACGTCATCA |
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|
|
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TGCCAGGCCAAC- -GCCACRCCCACY |
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|
|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGCCAGGCCAAC TTGCCAAG----- |
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