Information for 1-AGATGGGT (Motif 5)

C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C C G T A A C G T A G T C A C G T
p-value:1e-6
log p-value:-1.396e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif418.2
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets121.5 +/- 38.7bp
Average Position of motif in Background102.6 +/- 84.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----AGATGGGT
GGAACAGATGGCA
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----AGATGGGT-
GGACAGATGGCAG
A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGGT
AACAGATGGT-
A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGGT
AACAGATGGC-
A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

HAND2/MA1638.1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGATGGGT
ACCAGATGGC-
A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AGATGGGT-------
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGGT
DMCAGATGKS-
A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGATGGGT--
CAAGATGGCGGC
A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------AGATGGGT---
AAGGCCAGATGGTCCGG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

TWIST1/MA1123.2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGATGGGT
ATTCCAGATGTTT
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G T A A C G T A C T G A C T G A C T G A C G T
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T