Information for 1-CCCCAAATGATC (Motif 3)

A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C T G A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets127.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSGN1/MA1524.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCCCAAATGATC
CGCCATATGTCC
A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
A T G C T C A G A T G C A T G C C T G A G C A T C G T A A G C T A T C G A C G T A G T C T A G C

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAAATGATC
TGWCCTCARNTGACC
A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

TFAP4(var.2)/MA1570.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCCCAAATGATC
-AACATATGTT-
A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
A C G T T C G A G T C A A T G C C G T A A G C T T C G A A G C T A C T G C A G T A G C T A C G T

Ebf2/MA1604.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCCAAATGATC
TTCCCAAGGGACT
A C G T A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

NR1H4/MA1110.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCCAAATGATC--
---TCAATGACCTA
A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCCCAAATGATC
TGACCTCAGGTGACC
A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
G A C T T A C G C G T A T G A C A G T C G A C T A T G C C T G A C A T G T A C G G C A T T A C G T C G A T G A C G T A C

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCCAAATGATC
AAGCCCCCCAAAAAT-
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCCCAAATGATC
-TCCAGATGTT-
A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C
A C G T A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCCCAAATGATC-
-AACAGATGGTCN
A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C G T
A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

RREB1/MA0073.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCCCAAATGATC--------
CCCCAAACCACCCCCCCCCA
A G T C A G T C A G T C A G T C C G T A C G T A C G T A A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C