| p-value: | 1e-3 |
| log p-value: | -7.849e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 8.33% |
| Number of Background Sequences with motif | 2.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 70.0 +/- 0.0bp |
| Average Position of motif in Background | 98.0 +/- 37.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTCATTTTTCTC GKVTCADRTTWC-- |
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PB0062.1_Sox12_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CTCATTTTTCTC--- -TAATTGTTCTAAAC |
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PH0152.1_Pou6f1_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----CTCATTTTTCTC GCAACCTCATTATNNNN |
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POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTCATTTTTCTC NNCTCATTAT---- |
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PH0151.1_Pou6f1_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----CTCATTTTTCTC NNNACCTCATTATCNTN |
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|
|
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTCATTTTTCTC GKMTCADRTTWC-- |
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SOX8/MA0868.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTCATTTTTCTC -CCATTGTTCT- |
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|
PRDM1/MA0508.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CTCATTTTTCTC-- ---TTCTTTCTCTT |
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|
|
PB0072.1_Sox5_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTCATTTTTCTC-- NNTTTATTGTTCTNNN |
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SOX14/MA1562.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTCATTTTTCTC --CATTGTTCGG |
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