| p-value: | 1e-3 |
| log p-value: | -8.856e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 63.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC ---TGACCT--- |
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RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC---- --TTGACCTANTTATN |
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|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTCTGACCTACC-- NNHYTGACCTAGWTT |
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|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC- ---TGACCTARTT |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC- ---TGACCTARTT |
|
|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC -NNTGACCTTTN |
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|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC-- --BTGACCTAVTTW |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC --NTGACCTN-- |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC--- ---TGACCTANTTAN |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TTCTGACCTACC --NTGACCTCN- |
|
|
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