Information for 16-CACGCGCG (Motif 36)

G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
Reverse Opposite:
A T G C C A T G T G A C C A T G G A T C T C A G C A G T C A T G
p-value:1e-3
log p-value:-8.557e+00
Information Content per bp:1.599
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif10.93%
Number of Background Sequences with motif3822.4
Percentage of Background Sequences with motif7.97%
Average Position of motif in Targets97.5 +/- 56.6bp
Average Position of motif in Background100.5 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL5/MA0632.2/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-CACGCGCG-
TCACGCGCAC
A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G A C G T
A C G T A G T C C T G A A G T C C T A G G A T C T C A G T A G C G T C A G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CACGCGCG
CACGCA--
G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

HES1/MA1099.2/Jaspar

Match Rank:3
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CACGCGCG
GNCACGTGCC
A C G T A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
T A C G T A G C G T A C C T G A A G T C C T A G G A C T C A T G G T A C T G A C

HES2/MA0616.2/Jaspar

Match Rank:4
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CACGCGCG
GGCACGTGCC
A C G T A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
T A C G T C A G A G T C C T G A A G T C C T A G A G C T A C T G G T A C T A G C

SOHLH2/MA1560.1/Jaspar

Match Rank:5
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CACGCGCG
CGCACGTGCA
A C G T A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A

HEY1/MA0823.1/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CACGCGCG
GACACGTGCC
A C G T A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CACGCGCG
GCACGTNC-
A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T

KLF6/MA1517.1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CACGCGCG
GGCCACGCCCA
A C G T A C G T A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
A T C G T C A G T G A C T G A C G T C A A G T C C T A G A G T C T A G C G T A C G T C A

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACGCGCG-----
TGGCGCGCGCGCCTGA
A C G T A C G T A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CACGCGCG
NGKCACGTGM-
A C G T A C G T A C G T G A T C G T C A A G T C C T A G G T A C A C T G G T A C T A C G
T C A G T A C G C A G T T G A C C G T A A G T C T C A G G C A T A C T G G T A C A C G T