Information for 15-CACCATATCG (Motif 28)

A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T C G T A A C G T A C T G A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.514e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background78.5 +/- 48.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CACCATATCG--
CACCATATGGCG
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T A C G T
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G

OLIG2/MA0678.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CACCATATCG-
-ACCATATGGT
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T
A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CACCATATCG-
-ACCATATGTT
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

NEUROD2/MA0668.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACCATATCG-
-ACCATATGGC
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T
A C G T C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

OLIG1/MA0826.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CACCATATCG-
-AACATATGTT
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T
A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CACCATATCG-
-ACCATATGTT
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T
A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CACCATATCG-
-AACATATGTT
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T
A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

PB0127.1_Gata6_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACCATATCG-----
GCGGCGATATCGCAGCG
A C G T A C G T A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACCATATCG--
AAACATATGTTT
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

ATOH7/MA1468.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CACCATATCG-
-AACATATGTC
A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A G T C A C T G A C G T
A C G T T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C