Information for 6-MTKGACAGACAM (Motif 7)

T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
Reverse Opposite:
A C T G C A G T T C A G A C G T A G T C A C G T A T C G G C A T G T A C G T C A T G C A A C T G
p-value:1e-6
log p-value:-1.591e+01
Information Content per bp:1.619
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif1335.1
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets96.8 +/- 46.9bp
Average Position of motif in Background104.5 +/- 73.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-MTKGACAGACAM
AGGTGHCAGACA-
A C G T T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-MTKGACAGACAM
AGGTGNCAGACAG
A C G T T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:MTKGACAGACAM
-TTGACAGC---
T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:MTKGACAGACAM
-TTGACAGG---
T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:MTKGACAGACAM
VBTGWCAGCB--
T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--MTKGACAGACAM--
GTATTGACAGCTNNTT
A C G T A C G T T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:MTKGACAGACAM
-TTGACAG----
T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--MTKGACAGACAM--
GTATTGACAGGTNNTT
A C G T A C G T T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--MTKGACAGACAM--
NNATTGACAGGTGCTT
A C G T A C G T T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MTKGACAGACAM
RHTGWCAR----
T G A C A C G T C A G T A C T G C G T A T A G C C G T A T C A G T G C A A G T C G T C A T G A C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T