Information for 6-GGCTAGCAGC (Motif 27)

A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.948e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif11.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background71.2 +/- 53.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCTAGCAGC
AGGGTAACAGC
A C G T A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCTAGCAGC
VGCTGGCA--
A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGCAGC--
CTGGCAGNCTGCCA
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCTAGCAGC----
ADGGYAGYAGCATCT
A C G T A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGCAGC---
CCGCATAGCAACGGA
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCTAGCAGC-
CTGTCTGTCACCT
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCTAGCAGC----
----AGCAGCTGCT
A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGCTAGCAGC-
TGTTKCCTAGCAACM
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GGCTAGCAGC-
------CAGCC
A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAGCAGC-
TGTCTGDCACCT
A C G T A C T G A C T G A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T