Information for 18-TGTGACAAATTA (Motif 16)

A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.079e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGTGACAAATTA-
ACCGTGACTAATTNN
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PH0132.1_Pax6/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGTGACAAATTA------
--TGATTAATTAATTGAC
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

PH0107.1_Msx2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGTGACAAATTA-----
GAAGACCAATTAGCGCT
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

NOTO/MA0710.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TGTGACAAATTA--
----GCTAATTAGC
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

Nobox/MA0125.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGTGACAAATTA
----ACCAATTA
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

PAX4/MA0068.2/Jaspar

Match Rank:6
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGTGACAAATTA-
-----CTAATTAG
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G

GBX1/MA0889.1/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGTGACAAATTA--
----ACTAATTAGC
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C

Dlx1/MA0879.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGTGACAAATTA--
----CCTAATTATC
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

PRRX2/MA0075.3/Jaspar

Match Rank:9
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGTGACAAATTA-
-----CTAATTAA
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T T G C A C G T A A C G T A C G T T C G A C T G A

LHX9/MA0701.2/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TGTGACAAATTA-
-----CTAATTAA
A C G T A C T G A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A T C G A