Information for 11-GGCACCTATG (Motif 29)

A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.277e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif15.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background94.3 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI2/MA0745.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGCACCTATG--
ATGCACCTGTCAT
A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C G T
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGCACCTATG
TGACACCT---
A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGCACCTATG--
CAGCACCTGTCCC
A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C G T
A T G C C G T A T A C G T A G C C T G A A T G C T A G C A G C T A T C G A G C T A G T C G T A C A G T C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGCACCTATG---
NNTNCGCACCTGTNGAN
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGCACCTATG----
NTCNTCCCCTATNNGNN
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCACCTATG--
--NACATATGGN
A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGCACCTATG-
NNGGCGACACCTCNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCACCTATG
TTVACACCTH--
A C G T A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G
A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCACCTATG
-GCACGTAY-
A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCACCTATG
BGCACGTA--
A C T G A C T G A G T C C G T A A G T C A G T C A C G T C G T A A C G T A C T G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T