| p-value: | 1e-3 |
| log p-value: | -8.361e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 10.00% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 29.0 +/- 0.0bp |
| Average Position of motif in Background | 54.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA9/MA0594.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGTTACGAC NNTTTACGAC |
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PH0066.1_Hoxc11/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGTTACGAC---- NNNTTTTACGACNTTN |
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PH0065.1_Hoxc10/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGTTACGAC---- ANNTTTTACGACNTNN |
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PH0067.1_Hoxc12/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAGTTACGAC---- GNNNTTTTACGACCTNA |
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|
PH0077.1_Hoxd12/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAGTTACGAC---- NNNATTTTACGACNNTN |
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|
|
PH0076.1_Hoxd11/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAGTTACGAC---- ANNATTTTACGACNTNA |
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|
|
HOXC9/MA0485.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGTTACGAC NTTTTACGAC |
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|
|
HOXB9/MA1503.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGTTACGAC NTTTTACGAC |
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|
|
PH0047.1_Hoxa11/Jaspar
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGTTACGAC---- NNGTTTTACGACTTTA |
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|
HOXC11/MA0651.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGTTACGAC- NTTTTACGACC |
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