Information for 2-TGTTCAAAGTAG (Motif 9)

A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7/MA0769.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGTTCAAAGTAG
ANATCAAAGNN-
A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGTTCAAAGTAG--
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGTTCAAAGTAG--
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTTCAAAGTAG
ASATCAAAGG--
A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTTCAAAGTAG--
NNNAGATCAAAGGANNN
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTTCAAAGTAG
ACATCAAAGG--
A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTTCAAAGTAG
AAAGATCAAAGGAA
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGTTCAAAGTAG--
NANAGATCAAAGGGNNN
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTTCAAAGTAG
NATTCAAAT---
A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGTTCAAAGTAG
CGGTTTCAAA----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A C G T A C G T A A C T G A C G T C G T A A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T