Information for 3-CGCAAAAA (Motif 43)

A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G
p-value:1e-2
log p-value:-5.059e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif66.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background80.7 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAAA---
CAATTGCAAAAATAT
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAAA
TTCGCGCGAAAA
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CGCAAAAA
AGTCGTAAAAA
A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGCAAAAA--
TACTGGAAAAAAAA
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGCAAAAA
GGTCGTAAAAA
A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

ZNF384/MA1125.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGCAAAAA---
TTTAAAAAAAAA
A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C G T A C G T
C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A

E2F4/MA0470.2/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CGCAAAAA
NAATGGCGCCAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A

HOXD10/MA1506.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCAAAAA
GGTCGTAAAAC
A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCAAAAA
GTCGTAAAAA
A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

PB0075.1_Sp100_1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CGCAAAAA
ATTTTACGGAAAAT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A
C T G A C G A T C G A T G C A T G A C T G T C A A T G C A T C G A C T G G C T A C G T A G C T A G C T A C A G T