Information for 7-CCCTGCTWSMWG (Motif 7)

A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
Reverse Opposite:
A G T C C G A T A C G T A T G C C G A T C G T A A C T G A G T C C G T A A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.523e+01
Information Content per bp:1.866
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets100.0 +/- 35.6bp
Average Position of motif in Background119.4 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGCTWSMWG
NNCCTGCTGNG--
A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTWSMWG
CCCCCTGCTGTGNN
A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTWSMWG
CCCCCTGCTGTG--
A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCTWSMWG
GGCCYCCTGCTGDGH-
A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTWSMWG-
TCNCCTGCTGNGNNN
A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

CTCFL/MA1102.2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCCTGCTWSMWG
GCGCCCCCTGNN-----
A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCTGCTWSMWG----
ACATGCTACCTAATAC
A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTWSMWG-
RGMCCTACTRTGTGC
A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTWSMWG
CCYCCYGCTGDG--
A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G A C G T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCTGCTWSMWG
TRCACCTGCY-----
A C G T A C G T A C G T A G T C A G T C G T A C A C G T A C T G A G T C A C G T C G T A A T C G G T C A C G T A A C T G
A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T A C G T A C G T A C G T A C G T