Information for 22-ATCTCATAGCAG (Motif 26)

C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C T G C G T A A C T G C G T A A C G T
p-value:1e-3
log p-value:-8.581e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background129.7 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic2/MA1629.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATCTCATAGCAG----
--CTCACAGCAGGGGG
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

RFX1/MA0509.2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATCTCATAGCAG---
-TNCCATAGCAACNN
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCTCATAGCAG----
-CCACACAGCAGGAGA
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0098.1_Zfp410_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------ATCTCATAGCAG
NNNTCCATCCCATAANN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ATCTCATAGCAG---
---TAACAGCAGACT
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:ATCTCATAGCAG----
----CACAGCAGGGGG
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATCTCATAGCAG----
-CCGCATAGCAACGGA
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCTCATAGCAG--
TCCATCCCATAATACTC
A C G T A C G T A C G T C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATCTCATAGCAG----
-TACCATAGCAACGGT
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATCTCATAGCAG---
ATGTCACAACAACAC
C G T A A C G T A G T C A C G T A G T C C G T A A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C