Information for 8-CTGATTGGCAGC (Motif 8)

T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
Reverse Opposite:
C A T G G A T C C G A T A T C G G T A C A T G C G T C A T C G A C G A T A T G C C G T A A C T G
p-value:1e-3
log p-value:-8.390e+00
Information Content per bp:1.645
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif29.41%
Number of Background Sequences with motif2233.8
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets60.5 +/- 41.0bp
Average Position of motif in Background99.9 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGATTGGCAGC
BTGABTGACAGS
T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CTGATTGGCAGC
NCTGATTGGNN--
A C G T T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTGATTGGCAGC
NTGATTGACAGN
T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGATTGGCAGC
NCTGATTGGNN--
A C G T T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTGATTGGCAGC
CCGATTGGCT--
T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CTGATTGGCAGC-
-TGAGTGACAGSC
T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PKNOX1/MA0782.2/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CTGATTGGCAGC--
TTTGAGTGACAGCTA
A C G T T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGATTGGCAGC-
-TGATTGGCTANN
T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGATTGGCAGC
TTGATTGN----
T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTGATTGGCAGC
---NTTGGCANN
T A G C G C A T A T C G G C T A A C G T A C G T A T C G A C T G A T G C C G T A C A T G G T A C
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G