Information for 18-TCTGGCCT (Motif 39)

A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A
p-value:1e-1
log p-value:-2.869e+00
Information Content per bp:1.530
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif457.5
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets96.4 +/- 55.0bp
Average Position of motif in Background95.7 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)2.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCCT
GGTCTGGCAT
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TCTGGCCT--
--AGGCCTAG
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCTGGCCT--
--TGACCTYA
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCTGGCCT---
-CTGACCTTTG
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TCTGGCCT
CNAGGCCT
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCCT-
NNACTTGCCTT
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGCCT--
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGCCT-----
NNHYTGACCTAGWTT
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTGGCCT-
-GTGACCTT
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCTGGCCT--
BNTGDCCTTG
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G