Information for 11-GCACTGTCTATC (Motif 12)

A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C T G C G T A A G T C C G T A A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.871e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background191.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCACTGTCTATC--
--NCTGTCAATCAN
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCACTGTCTATC--
--SCTGTCAVTCAV
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCACTGTCTATC----
---CTGTCTGTCACCT
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PKNOX1/MA0782.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCACTGTCTATC---
NNGCTGTCACTCANN
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------GCACTGTCTATC
NNNNTGAGCACTGTNNG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCACTGTCTATC----
NNNCCTGTCACTCANNN
A C G T A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCACTGTCTATC----
----TGTCTGDCACCT
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCACTGTCTATC
-TATTGTTTATT
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C
A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCACTGTCTATC-
-GSCTGTCACTCA
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C A C G T
A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCACTGTCTATC
----TGTCTAGA
A C T G A G T C C G T A A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C G T A G T C
A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A