Information for 5-YRCKGSACCG (Motif 17)

A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T T A G C A G T C G T C A A C T G A G T C T C G A
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets98.4 +/- 58.9bp
Average Position of motif in Background105.5 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-YRCKGSACCG
GGGCGGGACC-
A C G T A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T

ZFP57/MA1583.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YRCKGSACCG-
NNTGCGGCAANNN
A C G T A C G T A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G A C G T
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----YRCKGSACCG--
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:YRCKGSACCG
TGCSGCANTN
A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G
A G C T T C A G G A T C A T C G T C A G A T G C T G C A G T C A C G A T C T A G

PAX5/MA0014.3/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-YRCKGSACCG-
GAGCGTGACCCC
A C G T A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

ZBTB32/MA1580.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-YRCKGSACCG
ATACTGTACA-
A C G T A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G
G C T A G A C T C T G A T G A C G C A T A T C G A C G T G C T A G A T C C G T A A C G T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:YRCKGSACCG
----GCTCCG
A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

TFDP1/MA1122.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-YRCKGSACCG
GGGCGGGAAGG
A C G T A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G
T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G

OVOL2/MA1545.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:YRCKGSACCG-------
----GTACCGTTATGTG
A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-YRCKGSACCG-
TCACGTGACCGG
A C G T A G C T C T A G A G T C A C G T A C T G A T C G C G T A A G T C A G T C A C T G A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G