| p-value: | 1e-2 |
| log p-value: | -6.733e+00 |
| Information Content per bp: | 1.926 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.78% |
| Number of Background Sequences with motif | 83.2 |
| Percentage of Background Sequences with motif | 0.18% |
| Average Position of motif in Targets | 86.4 +/- 53.5bp |
| Average Position of motif in Background | 103.0 +/- 63.5bp |
| Strand Bias (log2 ratio + to - strand density) | -1.3 |
| Multiplicity (# of sites on avg that occur together) | 2.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GTCCATCACC- CTGTCTGTCACCT |
|
|
|
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCCATCACC SCTGTCAVTCAV- |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTCCATCACC- TGTCTGDCACCT |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCCATCACC NCTGTCAATCAN- |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTCCATCACC YCATCMATCA-- |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCCATCACC GYCATCMATCAT- |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCCATCACC GGCCATTAAC |
|
|
|
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTCCATCACC- KGCCCTTCCCCA |
|
|
|
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTCCATCACC GGCTCYAKCAYC |
|
|
|
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTCCATCACC- TGACCTTGACCT |
|
|
|