Information for 11-TTTTGCTC (Motif 28)

C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C
Reverse Opposite:
A C T G T C G A T A C G G T A C T G C A G T C A C G T A G C T A
p-value:1e-5
log p-value:-1.262e+01
Information Content per bp:1.646
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.59%
Number of Background Sequences with motif924.0
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets92.3 +/- 59.3bp
Average Position of motif in Background99.7 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TTTTGCTC--
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTTTGCTC
CCATTGTTNY-
A C G T A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGCTC--
NNHTGTGGTTWN
A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTTTGCTC---
TAATTGTTCTAAAC
A C G T A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T A C G T
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGCTC-----
TTTTTTTTCNNGTN
A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T A C G T A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

SOX8/MA0868.2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGCTC
CCATTGTTCT-
A C G T A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TTTTGCTC---
TTCAATTGTTCTAAAA
A C G T A C G T A C G T A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTTTGCTC--
NNTTTATTGTTCTNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTTTGCTC--
----GCTCCG
C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGCTC---
ANATTTTTGCAANTN
A C G T A C G T A C G T A C G T C G A T C G A T C A G T A C G T C A T G A T G C A G C T T G A C A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G