Information for 14-GTTTATGCTAAG (Motif 20)

A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C T G A G T C C G T A A C G T C G T A C G T A C G T A A G T C
p-value:1e-3
log p-value:-8.796e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets160.0 +/- 0.0bp
Average Position of motif in Background167.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F1/MA0786.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTTTATGCTAAG--
--TTATGCAAATTA
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTTTATGCTAAG--
--TTATGCAAATTA
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GTTTATGCTAAG
---TATGCAAAT
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G
A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU3F3/MA0788.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTTTATGCTAAG--
-ATTATGCTAATTT
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T
A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTTTATGCTAAG---
---TATGCWAATBAV
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GTTTATGCTAAG-
-AATATGCAAATT
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T
A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GTTTATGCTAAG
---TATGCAAAT
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTTATGCTAAG
--TTATGCAAAT
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G
A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTTTATGCTAAG----
TTGTATGCAAATTAGA
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTTTATGCTAAG----
TTGTATGCAAATTAGA
A C T G A C G T A C G T A C G T C G T A A C G T A C T G A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A