Information for 13-GTCGAGCAAC (Motif 24)

A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C A C G T A G T C A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.324e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.0 +/- 0.0bp
Average Position of motif in Background194.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTCGAGCAAC--
TCCGTCGCTTAAAAG
A C G T A C G T A C G T A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCGAGCAAC--
SCCTAGCAACAG
A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

CEBPD/MA0836.2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCGAGCAAC-
NNATTGTGCAATN
A C G T A C G T A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T
C G T A C G A T T C G A G A C T C A G T C T A G G A C T C T A G G T A C G T C A C T G A A G C T G T C A

RFX7/MA1554.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTCGAGCAAC-
--NTAGCAACG
A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T
A C G T A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCGAGCAAC---
CCGCATAGCAACGGA
A C G T A C G T A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCGAGCAAC
GTTGCGCAAT
A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCGAGCAAC-
TGTTKCCTAGCAACM
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0199.1_Zfp161_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCGAGCAAC----
GCCGCGCAGTGCGT
A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCGAGCAAC---
TCTTTCGAGGAATTTG
A C G T A C G T A C G T A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

CEBPE/MA0837.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTCGAGCAAC
ATTGCGCAAT
A C T G A C G T A G T C A C T G C G T A A C T G A G T C C G T A C G T A A G T C
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T