Information for 4-CAGCTTCAGCTC (Motif 4)

A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
Reverse Opposite:
T C A G C G T A A T C G A T G C A C G T A C T G C G T A C G T A A C T G G T A C A C G T A T C G
p-value:1e-11
log p-value:-2.666e+01
Information Content per bp:1.849
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif35.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets89.2 +/- 44.7bp
Average Position of motif in Background93.2 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CAGCTTCAGCTC
--GCTTCC----
A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTTCAGCTC
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGCTTCAGCTC
NNGCTTCTGTNN
A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTTCAGCTC
DGCAGCTGCYSS--
A C G T A C G T A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCAGCTC
AACAGCTGCAG---
A C G T A C G T A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGCTTCAGCTC-
-AGTTTCAGTTTC
A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C A C G T
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

MYOG/MA0500.2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTTCAGCTC
NNGCAGCTGCNN---
A C G T A C G T A C G T A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T A C G T A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCAGCTC
CGCAGCTGCG----
A C G T A C G T A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTTCAGCTC
AGCAGCTGCTNN--
A C G T A C G T A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGCTTCAGCTC-
-ASTTTCACTTCC
A T G C C G T A A C T G T A G C A C G T A C G T A G T C C G T A A T C G A T G C C G A T A G T C A C G T
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C