Information for 20-GAGCTACCAATC (Motif 25)

A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C T G A C G T C G T A A C T G A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background95.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GAGCTACCAATC---
----AACCAATCAGA
A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GAGCTACCAATC---
----AGCCAATCAGA
A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAGCTACCAATC--
ACATGCTACCTAATAC
A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAGCTACCAATC-
AAAGACCTGTCAATCC
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCTACCAATC---
NAGATWNBNATCTNN
A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAGCTACCAATC--
------CCAATCAA
A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0170.1_Tgif2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGCTACCAATC-
AACTAGCTGTCAATAC
A C G T A C G T A C G T A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGCTACCAATC-
-ACTAGCCAATCA
A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGCTACCAATC--
--NCTGTCAATCAN
A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGCTACCAATC---
---CCATCAATCAAA
A C T G C G T A A C T G A G T C A C G T C G T A A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A