Information for 19-AGACTTAATC (Motif 33)

C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C G T
p-value:1e-3
log p-value:-6.993e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif26.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background109.9 +/- 99.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-AGACTTAATC------
NANANTTAATCCCNNNN
A C G T C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGACTTAATC------
GATAATTAATCCCTCTT
A C G T C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AGACTTAATC---
BCWGATTCAATCAAN
A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A

DUXA/MA0884.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AGACTTAATC--
CTAATTTAATCAA
A C G T C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGACTTAATC--
----TTAATCCG
C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AGACTTAATC---
---CCTAATCCGC
C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:AGACTTAATC--
----YTAATCCY
C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGACTTAATC--
---CTTAATCCC
C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AGACTTAATC---
---NYTAATCCYB
C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AGACTTAATC---
---GCTAATCCCC
C G T A A C T G C G T A A G T C A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C