| p-value: | 1e-5 |
| log p-value: | -1.366e+01 |
| Information Content per bp: | 1.895 |
| Number of Target Sequences with motif | 149.0 |
| Percentage of Target Sequences with motif | 5.61% |
| Number of Background Sequences with motif | 1752.7 |
| Percentage of Background Sequences with motif | 3.73% |
| Average Position of motif in Targets | 107.5 +/- 59.1bp |
| Average Position of motif in Background | 99.1 +/- 57.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.1 |
| Multiplicity (# of sites on avg that occur together) | 1.02 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTAGSAT- BTVATTWGCATA |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TTTAGSAT- CTCATTTGCATW |
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POU5F1B/MA0792.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTAGSAT- ATTTGCATA |
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POU5F1/MA1115.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTAGSAT-- NATTTGCATNN |
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POU3F4/MA0789.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTTAGSAT- ATTTGCATA |
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|
|
POU2F1/MA0785.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTTAGSAT--- AATTTGCATANT |
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|
|
POU3F2/MA0787.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTAGSAT-- TAATTTGCATAA |
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|
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POU3F1/MA0786.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTAGSAT-- TAATTTGCATAA |
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|
|
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 9 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TTTAGSAT-- ATTTGCATAA |
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POU3F3/MA0788.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TTTAGSAT--- AAATTAGCATAAT |
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