Information for 6-GGGGAAGGCCAA (Motif 6)

A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C G T A G T C A G T C A G T C A G T C
p-value:1e-4
log p-value:-1.079e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAGGCCAA
TGGGGAAGGGCM-
A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A A C G T

RELB/MA1117.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGGGAAGGCCAA
NNGGGGAATNC---
A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGGAAGGCCAA-
---CAAGGHCANV
A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAGGCCAA
AGGTCAAGGTCA-
A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAGGCCAA
GGGGGAATCCCC-
A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGGAAGGCCAA
NBYCAAGGTCAC
A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GGGGAAGGCCAA
----AAGGTCAC
A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

Znf281/MA1630.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGGAAGGCCAA
GGTGGGGGAGG----
A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G A C G T A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGGGAAGGCCAA
-GTCAAGGTCAC
A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A
A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

ZNF449/MA1656.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGGGAAGGCCAA----
--CCAAGCCCAACCAG
A C T G A C T G A C T G A C T G C G T A C G T A A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G