Information for 5-TAGTTGTACG (Motif 21)

A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A A G T C C G T A C G T A A G T C A C G T C G T A
p-value:1e-3
log p-value:-8.332e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background170.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD12/MA0873.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGTTGTACG---
--NTTTTACGACT
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

PB0172.1_Sox1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGTTGTACG--
CTATAATTGTTAGCG
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

SOX12/MA1561.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGTTGTACG--
-NATTGTTCGGT
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T
A C G T A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

HOXC9/MA0485.2/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTTGTACG--
--NTTTTACGAC
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

MYB/MA0100.3/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAGTTGTACG
NNCAGTTGNN--
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTTGTACG---
--NTTTTACGACC
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD10/MA1506.1/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTTGTACG---
--NTTTTACGACC
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

PB0094.1_Zfp128_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGTTGTACG-------
TTNGGGTACGCCNNANN
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGTTGTACG---
-ANTTTTACGACC
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TAGTTGTACG---
--NTTTTACGAGN
A C G T C G T A A C T G A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C