Information for 18-TAAATGTTAAGG (Motif 25)

A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T C G T A C G T A A G T C C G T A A C G T A C G T A C G T C G T A
p-value:1e-3
log p-value:-8.488e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background164.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TAAATGTTAAGG
CTATAATTGTTAGCG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAAATGTTAAGG
GCTAAACGGT----
A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAAATGTTAAGG
GGTTAAACATTAA--
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A A C G T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TAAATGTTAAGG-
AATATACATGTAAAACA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAAATGTTAAGG-
AAAATTGTTATGAA
A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TAAATGTTAAGG
ANGNAAAGGTCA---
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

ZNF652/MA1657.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TAAATGTTAAGG
GAAAGAGTTAAA-
A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAAATGTTAAGG--
--TATGCWAATBAV
A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAAATGTTAAGG
NTAATKGTTT---
A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAAATGTTAAGG
TTAAAGGTCAAA-
A C G T A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C T G
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A A C G T