| p-value: | 1e-3 |
| log p-value: | -9.082e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 0.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 104.0 +/- 0.0bp |
| Average Position of motif in Background | 48.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
TBP/MA0108.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TATAAAAGCATG-- GTATAAAAGGCGGGG |
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POL012.1_TATA-Box/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TATAAAAGCATG-- GTATAAAAGGCGGGG |
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TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TATAAAAGCATG GNCTATAAAAGG--- |
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PH0078.1_Hoxd13/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----TATAAAAGCATG CTACCAATAAAATTCT- |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TATAAAAGCATG NCYAATAAAA----- |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TATAAAAGCATG CCYMATAAAA----- |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TATAAAAGCATG KGCCATAAAA----- |
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Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TATAAAAGCATG CYHATAAAAN---- |
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MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----TATAAAAGCATG TTCAAAWTAAAAGTC-- |
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ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TATAAAAGCATG--- TAYAAAAGBWGGCAG |
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