Information for 13-CGGTGAGCTT (Motif 25)

A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A C G T A G T C C G T A A G T C A G T C A C T G
p-value:1e-3
log p-value:-7.683e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background82.7 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGGTGAGCTT
--GTGACCTT
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGAGCTT-----
NNNGTGACCTTTGNNN
A C G T A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGTGAGCTT--
--NTGACCTTGA
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

NR2F2/MA1111.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGGTGAGCTT--
-NNTGACCTTTN
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

ESRRA/MA0592.3/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGGTGAGCTT----
-NNTGACCTTGANN
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGGTGAGCTT--
--ATGACCTTGA
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGTGAGCTT----
--GTGACCTTGRVN
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGAGCTT-----
NNNNTGACCTTTNNNN
A C G T A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A1/MA1112.2/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGTGAGCTT---
-NNTGACCTTTNN
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

NR1I3/MA1534.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGTGAGCTT-
--ATGAACTTT
A G T C A C T G A C T G A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T