Information for 11-CCAAGCAC (Motif 35)

A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C C A G T A G C T A C T G C T A G
p-value:1e-4
log p-value:-1.104e+01
Information Content per bp:1.914
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.43%
Number of Background Sequences with motif1361.6
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets108.7 +/- 56.8bp
Average Position of motif in Background104.3 +/- 63.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB14/MA1650.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAC--
CCCCGCGCACCC
A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T A C G T
T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CCAAGCAC
-CACGCA-
A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

KLF17/MA1514.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAC-----
CACCACGCACCCCTT
A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G T A C G T C A T G A C T G A C G C T A G A T C T C A G G T A C C G T A T A G C T A G C G A T C T G A C G A C T G A C T

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAC-
AGCCAATCAGA
A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAC-----
GACCACGCCCTTATT
A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

NFYA/MA0060.3/Jaspar

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAC-
AACCAATCAGA
A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

KLF3/MA1516.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAC-
GACCACGCCCA
A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T
C T A G T C G A T A G C G A T C T C G A G T A C C T A G T G A C T G A C G A T C G C T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCAC
TBGCACGCAA
A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCAAGCAC--
CCAGGAACAG
A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

EGR3/MA0732.1/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CCAAGCAC-
CTACGCCCACGCACT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C T G A G T C A A C T G A G T C C G T A A G T C A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T