Information for 12-TCTAGCCTAGGA (Motif 14)

A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T C G T A A C T G A C T G A G T C A C G T C G T A A C T G C G T A
p-value:1e-4
log p-value:-9.215e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCTAGCCTAGGA
-BCAGACWA---
A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTAGCCTAGGA
TGTCTAGACA----
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTAGCCTAGGA
CGTCTAGACA----
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCTAGCCTAGGA
GGGGCTYGKCTGGGA
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCTAGCCTAGGA
TGTCTAGA------
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCTAGCCTAGGA---
TGTTKCCTAGCAACM
A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCTAGCCTAGGA
NNACTTGCCTT---
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TCTAGCCTAGGA-------
---CTACTAGGATGTNNTN
A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:TCTAGCCTAGGA
--AGGCCTAG--
A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:TCTAGCCTAGGA
ACTAGCCAATCA
A C G T A G T C A C G T C G T A A C T G A G T C A G T C A C G T C G T A A C T G A C T G C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A