Information for 5-TGCTTGTATS (Motif 13)

C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G
Reverse Opposite:
T A G C C G T A A G C T C T G A A G T C C G T A T C G A A T C G T A G C G T C A
p-value:1e-10
log p-value:-2.323e+01
Information Content per bp:1.669
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif177.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets90.0 +/- 54.4bp
Average Position of motif in Background98.3 +/- 58.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGTATS
TTGATTGN---
A C G T C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCTTGTATS---
--AATGTATCAAT
C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTGTATS---
NTTGATTGAATCWGV
A C G T A C G T C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G A C G T A C G T A C G T
A C G T C G A T C G A T T C A G C G T A A C G T A C G T T C A G C T G A C G T A A C G T A G T C G C T A T A C G T C A G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGTATS
TTGCGTGCVA-
A C G T C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCTTGTATS
TGCGTG----
C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCTTGTATS-----
CCATTGTATGCAAAT
C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGCTTGTATS-----
NTTNTATGAATGTGNNC
A C G T A C G T C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTGTATS----
NNGATTGCATCATNN
A C G T C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G A C G T A C G T A C G T A C G T
C T G A C G A T C A T G T C G A G C A T C A G T C A T G G A T C C T G A G A C T G T A C G C T A A G C T G C A T G C A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCTTGTATS--
--ATTGCATCAK
C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

ATF4/MA0833.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCTTGTATS----
NNATTGCATCATNN
C A G T A T C G T A G C A G C T C G A T C T A G A G C T T C G A C G A T A T C G A C G T A C G T A C G T A C G T
C G A T C A G T T C G A G C A T C A G T C T A G G A T C T C G A G A C T G T A C C G T A A G C T G A C T G A C T