| p-value: | 1e-3 |
| log p-value: | -7.598e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.14% |
| Number of Background Sequences with motif | 2.9 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 169.0 +/- 0.0bp |
| Average Position of motif in Background | 159.8 +/- 32.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXC13/MA0907.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CACTCGTAAC-- -GCTCGTAAAAA |
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PH0048.1_Hoxa13/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CACTCGTAAC---- AAACCTCGTAAAATTT |
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HOXA9/MA0594.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CACTCGTAAC-- --GTCGTAAACG |
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HOXD12/MA0873.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CACTCGTAAC-- -AGTCGTAAAAA |
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|
|
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CACTCGTAAC---- AAAGCTCGTAAAATTT |
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|
|
HOXC12/MA0906.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CACTCGTAAC-- -GGTCGTAAAAA |
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|
|
Hoxa11/MA0911.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CACTCGTAAC--- -GGTCGTAAAATT |
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|
|
TFEC/MA0871.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CACTCGTAAC- CCCACGTGACC |
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|
|
NKX2-8/MA0673.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CACTCGTAAC CCACTTGAA-- |
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|
HOXC11/MA0651.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CACTCGTAAC-- -GGTCGTAAAAT |
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