Information for 19-TAAAGAACTTAC (Motif 18)

A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T C G T A
p-value:1e-4
log p-value:-9.666e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background122.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TAAAGAACTTAC--
CTTTAAGTACTTAATG
A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TAAAGAACTTAC
--AAGCACTTAA
A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGAACTTAC--
NATTTAAGTACTTANNA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAAAGAACTTAC--
NATTTAAGTACTTNAAA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

NR1I3/MA1534.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TAAAGAACTTAC
--ATGAACTTT-
A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAAGAACTTAC-
ATAACCACTTAAA
A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C G T
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAAAGAACTTAC
NTAATBNAATTA-
A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T

PROP1/MA0715.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAAGAACTTAC
TAATTTAATTA-
A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAAAGAACTTAC
GTAAACAA-----
A C G T A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C
A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TAAAGAACTTAC---
----NNACTTACCTN
A C G T C G T A C G T A C G T A A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G