Information for 1-GTCGCCTTTT (Motif 3)

A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C T G A C T G A G T C A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.055e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTCGCCTTTT---
CTGCCWVCTTTTRTA
A C G T A C G T A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A

NR4A1/MA1112.2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCGCCTTTT-
NNTGACCTTTNN
A C G T A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTCGCCTTTT--------
---GACTTTTAWTTTGAA
A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCGCCTTTT---
-TGACCTTTNCNT
A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTCGCCTTTT---
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

YY2/MA0748.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCGCCTTTT
CGCCGCCATNN
A C G T A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T

YY1(Zf)/Promoter/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCGCCTTTT--
GCCGCCATCTTG
A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCGCCTTTT--
TCCGTCGCTTAAAAG
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCGCCTTTT--
NNGTANTGTTTTNC
A C G T A C G T A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

PROX1/MA0794.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCGCCTTTT
CAAGACGCCTTA-
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A A C G T