Information for 18-GGTTAGGTCC (Motif 39)

A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C A G T C A C G T C G T A C G T A A G T C A G T C
p-value:1e-3
log p-value:-6.996e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif16.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background88.3 +/- 102.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGTTAGGTCC--
--TWVGGTCCGC
A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGTTAGGTCC
----AGGTCA
A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGTTAGGTCC--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGGTCC--
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
T C A G C T G A C A T G C A T G A C G T A G T C C T G A A G C T T C A G T G C A T G A C G T A C A G C T A G T C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGGTCC--
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTTAGGTCC--
RGTTAGTGCCCY
A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

RARG(var.3)/MA1553.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTTAGGTCC--
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTTAGGTCC
CAGGTAAGTAT-
A C G T A C G T A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGTTAGGTCC
--TRAGGTCA
A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGTTAGGTCC--
GGTTAGAGACCT
A C T G A C T G A C G T A C G T C G T A A C T G A C T G A C G T A G T C A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T