Information for 17-AGCGTGGTAT (Motif 37)

C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.688e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background39.0 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGCGTGGTAT
TGCGTG----
C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AGCGTGGTAT
NANAAGGGCGTGGTC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCGTGGTAT---
TGCGGAGTGGGACTGG
A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGCGTGGTAT
TTGCGTGCVA-
A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

KLF3/MA1516.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCGTGGTAT
NGGGCGTGGTC-
A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
C G A T C T A G A C T G A C T G G A T C C A T G A G C T C T A G A T C G A G C T G A T C A C G T

KLF17/MA1514.1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGCGTGGTAT
AAGGGGTGCGTGGTG-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
C T G A C T G A A C T G C T A G A T C G A T C G G C A T C A T G A G T C C T A G C G A T A C T G A C T G C A G T C A T G A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGCGTGGTAT--
--CCWGGAATGY
C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCGTGGTAT
YSTGGGTGGTCT
A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCGTGGTAT---
NGTAGGTTGGCATNNN
A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

SP3/MA0746.2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCGTGGTAT
NGTGGGCGTGGCN-
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T
C T A G C T A G C A G T C T A G C T A G A C T G G T A C C T A G C A G T C T A G C A T G A G T C T A G C A C G T