Information for 8-AGAGMTSYTTCT (Motif 11)

C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T
Reverse Opposite:
C G T A A C T G C T G A C T G A C T G A A T G C C G T A A C G T A G T C A C G T G T A C G A C T
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.759
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif82.1
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets117.1 +/- 34.9bp
Average Position of motif in Background97.5 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGAGMTSYTTCT-
--GTCTGTTTCTA
C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T A C G T
A C G T A C G T C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGAGMTSYTTCT
AAGATATCCTT--
A C G T C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAGMTSYTTCT
AGGVNCCTTTGT
C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

MSC/MA0665.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAGMTSYTTCT
AACAGCTGTT---
A C G T C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T
C T G A T G C A A T G C C G T A A T C G A T G C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAGMTSYTTCT
AAACAGATGTTTA-
A C G T A C G T C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A A C G T

MYF6/MA0667.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGAGMTSYTTCT
AACAGCTGTT---
A C G T C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGAGMTSYTTCT-
NNNCTGATATCTCNNNN
A C G T A C G T A C G T A C G T C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAGMTSYTTCT-
-CAGCTGTTTCCT
C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T A C G T
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

PRDM1/MA0508.3/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGAGMTSYTTCT---
----TTCTTTCTCTT
C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

ATOH1(var.2)/MA1467.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGAGMTSYTTCT
GACAGCTGTT---
A C G T C T G A A C T G C G T A T C A G G T C A A C G T A T C G A G C T A G C T A G C T T G A C A C G T
C T A G C T G A A G T C C G T A A C T G G T A C C G A T A C T G A G C T A G C T A C G T A C G T A C G T