Information for 15-AGATAGTGACTT (Motif 19)

C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.552e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background164.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AGATAGTGACTT--
-----TTGACTTTT
C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGATAGTGACTT
GGTTAGAGACCT
C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGATAGTGACTT-
--ATATTTACATA
C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGATAGTGACTT-
-----GTGACCTT
C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGATAGTGACTT-
AAGGTCATGACCTT
A C G T C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
C T G A T C G A A C T G C A T G A G C T A G T C C T G A G A C T T C A G T G C A G T A C G A T C A G C T G A C T

ONECUT1/MA0679.2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGATAGTGACTT---
NNTTTATTGATTTTTT
A C G T C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGATAGTGACTT
---NCGTGACN-
C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGATAGTGACTT-
--ATATTTACATA
C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGATAGTGACTT---
AAACATAATGAGGTTGC
A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGATAGTGACTT-
GAGGTCATGACCTC
A C G T C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
T C A G T C G A A T C G C A T G C A G T A G T C C T G A A C G T T C A G G T C A T G A C A T G C A G C T A G T C