Information for 15-CCTAATGGTT (Motif 23)

A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A G T C C G T A A C G T A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-7.945e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 0.0bp
Average Position of motif in Background106.7 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGTT-
-NTAATKGTTT
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

Isl1/MA1608.1/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CCTAATGGTT
NNCTAATGGNN
A C G T A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

BARX2/MA1471.1/Jaspar

Match Rank:3
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGTT---
-NTAATGGTTTTN
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

VENTX/MA0724.1/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGTT
-CTAATCGNT
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CCTAATGGTT---
CCTTAATNGNTTTT
A C G T A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGTT
-NTAATTGN-
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCTAATGGTT
-CTAATKGV-
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGTT
-NTAATGAC-
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C A C G T

HOXB4/MA1499.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGTT
-NTAATGAT-
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T

HOXD4/MA1507.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGTT
-NTAATGAN-
A G T C A G T C A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T A C G T