Information for 2-CGTGGTAT (Motif 4)

A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T
Reverse Opposite:
C G T A A C G T G T C A A G T C A G T C C G T A A G T C C T A G
p-value:1e-5
log p-value:-1.270e+01
Information Content per bp:1.876
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2199.3
Percentage of Background Sequences with motif2.67%
Average Position of motif in Targets120.0 +/- 72.4bp
Average Position of motif in Background99.9 +/- 88.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF75D/MA1601.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CGTGGTAT-
ATGTGGGAAA
A C G T A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T A C G T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGTAT-
NNHTGTGGTTWN
A C G T A C G T A C G T A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CGTGGTAT
GTCTGTGGTTT
A C G T A C G T A C G T A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGTGGTAT--
CSTGGGAAAD
A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T A C G T A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGTGGTAT
NNTGTGGTTT
A C G T A C G T A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGTGGTAT
GCTGTGGTTT
A C G T A C G T A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGTGGTAT--
CCWGGAATGY
A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T A C G T A C G T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CGTGGTAT---
TGCGGAGTGGGACTGG
A C G T A C G T A C G T A C G T A C G T A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGTGGTAT---
-CTGGAATGYA
A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T A C G T A C G T A C G T
A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGTGGTAT--
--TGGAATGT
A G T C C T A G A C G T A C T G A C T G A C G T C G T A C G A T A C G T A C G T
A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T