Information for 4-CCTGRCYCCATC (Motif 4)

A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C
Reverse Opposite:
C T A G G T C A A C G T C T A G C T A G C T A G C T A G G A C T A G T C C G T A C T A G C T A G
p-value:1e-5
log p-value:-1.339e+01
Information Content per bp:1.687
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif35.29%
Number of Background Sequences with motif1106.4
Percentage of Background Sequences with motif2.31%
Average Position of motif in Targets146.8 +/- 47.6bp
Average Position of motif in Background97.6 +/- 62.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CCTGRCYCCATC-
NNTGGCCCCAGNN
A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C A C G T
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTGRCYCCATC--
TGTCGTGACCCCTTAAT
A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NR2C1/MA1535.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCTGRCYCCATC
-NTGACCTCN--
A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C
A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGRCYCCATC--
--TGACCYYTGVYN
A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGRCYCCATC
--TGACCYCT--
A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCTGRCYCCATC
NTTGGCANN---
A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGRCYCCATC--
NNNNTTGACCCCTNNNN
A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCTGRCYCCATC--
NNANTTGACCCCTNNNN
A C G T A C G T A C G T A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCTGRCYCCATC---
---GGCTCYAKCAYC
A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

ATF2/MA1632.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTGRCYCCATC-
NATGACNTCATNN
A G T C A G T C C G A T A C T G C T G A A G T C G A T C A G T C A G T C G T C A A C G T A G T C A C G T
C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T