Information for 3-GCGTGGTATT (Motif 26)

A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C A C T G A G T C
p-value:1e-4
log p-value:-9.789e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background177.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGTGGTATT
TGCGTG-----
A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCGTGGTATT--
TGCGGAGTGGGACTGG
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTGGTATT
NANAAGGGCGTGGTC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T

KLF3/MA1516.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGGTATT
NGGGCGTGGTC--
A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C G A T C T A G A C T G A C T G G A T C C A T G A G C T C T A G A T C G A G C T G A T C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGGTATT
TTGCGTGCVA--
A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

KLF6/MA1517.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGGTATT
TGGGCGTGGCN--
A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C A G T C A T G A T C G A C T G A G T C C T A G A C G T A C T G A C T G A G T C T A G C A C G T A C G T

SP3/MA0746.2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGGTATT
NGTGGGCGTGGCN--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C T A G C T A G C A G T C T A G C T A G A C T G G T A C C T A G C A G T C T A G C A T G A G T C T A G C A C G T A C G T

KLF2/MA1515.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCGTGGTATT
NGGGCGTGGTN--
A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C G A T T C A G A T C G T A C G A G T C C T A G A C G T C A T G A C T G A G C T A T C G A C G T A C G T

SP9/MA1564.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGGTATT
GGGGGGCGTGGN---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T
C T A G T C A G C A T G C T A G C T A G C A T G A G T C T A C G C A G T C A T G C A T G A G T C A C G T A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGGTATT-----
TNNTTTCGTATTNNANN
A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G