Information for 3-CGTTTCCACG (Motif 9)

A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A C T G C G T A C G T A C G T A A G T C A C T G
p-value:1e-4
log p-value:-9.462e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets190.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CGTTTCCACG---
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGTTTCCACG
CGTTGCTAT-
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGTTTCCACG
ATTTTCCATT
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

NFATC4/MA1525.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGTTTCCACG
ATTTTCCATN
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGTTTCCACG
-TTTTCCA--
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CGTTTCCACG
ATTTTCCATT
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGTTTCCACG
ATTTTCCATT
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGTTTCCACG
HTTTCCCASG
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGTTTCCACG
ATTTTCCATT
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGTTTCCACG
NNTTCCCANN
A G T C A C T G A C G T A C G T A C G T A G T C A G T C C G T A A G T C A C T G
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G