Information for 11-TGTGAAGCAGAC (Motif 16)

A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A G T C C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.231e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.0 +/- 0.0bp
Average Position of motif in Background73.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TGTGAAGCAGAC----
------CCAGACRSVB
A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PRDM4/MA1647.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGTGAAGCAGAC
-NAGAAACAGNN
A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAGCAGAC
TAGGTGTGAAG-----
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:TGTGAAGCAGAC--
------CCAGACAG
A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTGAAGCAGAC
--NGAAGC----
A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGTGAAGCAGAC--
------BCAGACWA
A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

TBX21/MA0690.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAGCAGAC
AAGGTGTGAA------
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGAAGCAGAC
AAGGTGTKAA------
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

TBX18/MA1565.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TGTGAAGCAGAC
GGAGGTGTGAAA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGTGAAGCAGAC
AGGTGTGAAA-----
A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C T G A G T C C G T A A C T G C G T A A G T C
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T