Information for 6-GWCAGAAAGA (Motif 15)

A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A
Reverse Opposite:
A G C T G T A C G C A T C A G T A C G T A G T C A C G T A T C G C G A T T A G C
p-value:1e-4
log p-value:-1.010e+01
Information Content per bp:1.717
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif885.9
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets105.5 +/- 49.2bp
Average Position of motif in Background101.1 +/- 80.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GWCAGAAAGA-
RHHCAGAGAGGB
A C G T A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GWCAGAAAGA-
NAGAGAAAGNA
A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

NEUROD1/MA1109.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GWCAGAAAGA--
GGACAGATGGCAG
A C G T A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GWCAGAAAGA-----
WNAGTCADAVTGAAACTN
A C G T A C G T A C G T A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GWCAGAAAGA-
GGAACAGATGGCA
A C G T A C G T A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GWCAGAAAGA---
BAGTCATANTGAAAG
A C G T A C G T A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T A C G T A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GWCAGAAAGA
-CCAGACAG-
A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GWCAGAAAGA-
-CCAGACRSVB
A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0166.1_Sox12_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GWCAGAAAGA---
AAACAGACAAAGGAAT
A C G T A C G T A C G T A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GWCAGAAAGA
AGGTGNCAGACAG-
A C G T A C G T A C G T A C G T A T C G C G T A A T G C C G T A C T A G C G T A G T C A C G T A A C T G C T G A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T