Information for 9-GAAATTGACG (Motif 14)

A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.089e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background84.6 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.66
Offset:5
Orientation:forward strand
Alignment:GAAATTGACG-
-----TGACGT
A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAAATTGACG
--TATTGAYY
A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G
A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

PH0024.1_Dlx5/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGACG---
GGGGTAATTAGCTCTG
A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAAATTGACG--
----ATGACGTA
A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

HOXB7/MA1501.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAATTGACG
GGTAATTAAC-
A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G
T C A G A C T G A G C T G T C A G T C A A C G T G C A T C T G A T C G A T A G C A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAAATTGACG----
GGAAAAATTGTTAGGAA
A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAATTGACG
GGAAATTCCC-
A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAAATTGACG-----
NNNNNATTGATGNGTGN
A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAATTGACG----
AAAATTGTTATGAA
A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAATTGACG--
GAAACTGAAACT
A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T