Information for 2-GGGCACGCCA (Motif 5)

A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C T G A C G T A C T G A G T C A G T C A G T C
p-value:1e-3
log p-value:-9.177e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:reverse strand
Alignment:------GGGCACGCCA
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GGGCACGCCA----
TTNGGGTACGCCNNANN
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGGCACGCCA---
NNGGCCACGCCTTTN
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGCACGCCA-
CNGTCACGCCAC
A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GGGCACGCCA
TBGCACGCAA
A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

PAX5/MA0014.3/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GGGCACGCCA
NNGGTCACGCTC
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGCACGCCA
NGTGGGCAT----
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGGCACGCCA-
-ATCACCCCAT
A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A A C G T
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GGGCACGCCA
---CACGCA-
A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGCACGCCA-
ATAAAGGCGCGCGAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C T G A G T C A G T C C G T A A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T