Information for 24-GGGGGAAATTTC (Motif 30)

A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C
Reverse Opposite:
A T C G C T G A C G T A T C G A A C G T G A C T G A C T A G T C A G T C T G A C A G T C A G T C
p-value:1e-3
log p-value:-7.588e+00
Information Content per bp:1.633
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif4370.0
Percentage of Background Sequences with motif4.70%
Average Position of motif in Targets61.6 +/- 47.9bp
Average Position of motif in Background100.5 +/- 79.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GGGGGAAATTTC-
---GGGAATTTCC
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C A C G T
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGGGGAAATTTC-
---GGAAATTCCC
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C A C G T
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGGGAAATTTC-------
TTCTAGAANNTTCCAGAANN
A C G T A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGGGGAAATTTC-----
--TAGAANVTTCTAGAA
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GGGGGAAATTTC
ANTNCCGGGGGGAANTT-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGGGGAAATTTC-
-NGGGGATTTCCC
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C A C G T
A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

NFATC4/MA1525.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGGGAAATTTC
AATGGAAAAT--
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGGGAAATTTC
AATGGAAAAT--
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGGGAAATTTC-----
----GAANNTTCTAGAA
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGGGAAATTTC
NNTGGAAANN--
A C T G C T A G A C T G C T A G C T A G C G T A C G T A T C G A A G C T C G A T A G C T A T G C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T