Information for 13-GGATAGTGAA (Motif 30)

A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C G T A G T C A G T C
p-value:1e-3
log p-value:-7.523e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif15.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets123.0 +/- 0.0bp
Average Position of motif in Background109.7 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF2/MA0051.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGATAGTGAA--------
GGAAAGCGAAACCAAAAC
A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGATAGTGAA---
-GAAAGTGAAAGT
A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGATAGTGAA---
-GAAAGTGAAAGT
A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGATAGTGAA---
-GAAACTGAAACT
A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGATAGTGAA-------
AAANNGAAAGTGAAAGTAAAN
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGATAGTGAA-
-GGYAATGAAA
A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T
A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGATAGTGAA-----
GGAAANTGAAACTNA
A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PH0168.1_Hnf1b/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGATAGTGAA-----
ANNNCTAGTTAACNGNN
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGATAGTGAA---
ACGAAAGCGAAAGT
A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGATAGTGAA---
-GRAASTGAAAST
A C T G A C T G C G T A A C G T C G T A A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T