| p-value: | 1e-3 |
| log p-value: | -8.819e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 0.5 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 25.0 +/- 0.0bp |
| Average Position of motif in Background | 94.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TCGGGTTAGC --GGATTAGC |
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SIX1/MA1118.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCGGGTTAGC TATCAGGTTAC- |
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OTX1/MA0711.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCGGGTTAGC -CGGATTAN- |
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PB0153.1_Nr2f2_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TCGGGTTAGC-- CGCGCCGGGTCACGTA |
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PITX1/MA0682.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCGGGTTAGC -NGGATTAN- |
|
|
|
GSC/MA0648.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCGGGTTAGC NNGGATTAGN |
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|
|
PH0035.1_Gsc/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCGGGTTAGC---- NNAAGGGATTAACGANT |
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|
|
DPRX/MA1480.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCGGGTTAGC- -NGGATTATCT |
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|
|
GSC2/MA0891.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCGGGTTAGC GNGGATTAGN |
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|
|
PITX3/MA0714.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCGGGTTAGC -GGGATTANN |
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|
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