Information for 2-TGCCCCGCTT (Motif 7)

A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A C T G A C T G A C T G A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.771e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background11.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCCCCGCTT
TGCCCAGNHW
A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGCCCCGCTT
ATGCCCACC--
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCCGCTT-
BTGACCTAVTTW
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

RORC/MA1151.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGCCCCGCTT--
TGACCTANTTAN
A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCCCCGCTT--
GGCCCCGCCCCC
A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGCCCCGCTT-
NNHYTGACCTAGWTT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

RORB/MA1150.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCCGCTT
NTGACCTAATT
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCCCGCTT-
YGGCCCCGCCCC
A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
A G T C C T A G C T A G A G T C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCCCGCTT
TGACCTARTT
A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCCCCGCTT
TGACCTARTT
A C G T A C T G A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T