Information for 1-ACGGATGTAA (Motif 3)

C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A T G C C T G A A C G T A G T C A G T C A C T G A C G T
p-value:1e-12
log p-value:-2.937e+01
Information Content per bp:1.941
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets79.0 +/- 47.9bp
Average Position of motif in Background120.7 +/- 41.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACGGATGTAA
ACCCGGATGTA-
A C G T A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACGGATGTAA
AACAAGGAAGTAA
A C G T A C G T A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A

PB0011.1_Ehf_1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----ACGGATGTAA
AGGACCCGGAAGTAA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
T G C A A C T G C A T G C G T A A G T C T A G C T G A C C T A G A C T G C G T A C G T A T C A G G A C T C G T A C T G A

FEV/MA0156.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACGGATGTAA
ACCGGAAGTG-
A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G A C G T

ELK3/MA0759.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACGGATGTAA
ACCGGAAGTA-
A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T C T G A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACGGATGTAA-
-ATGATGCAAT
C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

ETV3/MA0763.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ACGGATGTAA
ACCGGAAGTG-
A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
T C G A G A T C G A T C A C T G A C T G G T C A C G T A T C A G A G C T T C A G A C G T

ETV5/MA0765.2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACGGATGTAA
NCCGGAAGTNN
A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A
T C A G T A G C T G A C T A C G T A C G T C G A C T G A T A C G A G C T T A C G T A C G

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACGGATGTAA-
-MTGATGCAAT
C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Ptf1a/MA1618.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACGGATGTAA-
AAACAGATGTTTA
A C G T A C G T C G T A A G T C A C T G A C T G C G T A A G C T A T C G A C G T C G T A C G T A A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A