Information for 22-GMATCACG (Motif 34)

A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G C T G A A C G T A C T G A G T C
p-value:1e-2
log p-value:-6.836e+00
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif71.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets108.0 +/- 72.0bp
Average Position of motif in Background112.4 +/- 54.3bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GMATCACG----
NHRTCACGACDN
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

MLX/MA0663.1/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GMATCACG----
--ATCACGTGAT
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

TFE3/MA0831.2/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GMATCACG--
--GTCACGTG
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GMATCACG---
---GCACGTNC
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GMATCACG--
----CACGCA
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

MLXIPL/MA0664.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GMATCACG----
--ATCACGTGAT
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GMATCACG----
--ATCACGTGAC
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GMATCACG---
---GCACGTAY
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GMATCACG--
----CACGTG
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GMATCACG---
-GGTCACGTGC
A C T G G T A C C G T A A G C T A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C