Information for 20-ATGTCTAATTAA (Motif 21)

C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T A C G T C G T A A C T G C G T A A G T C C G T A A C G T
p-value:1e-4
log p-value:-9.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARGFX/MA1463.1/Jaspar

Match Rank:1
Score:0.80
Offset:3
Orientation:forward strand
Alignment:ATGTCTAATTAA-
---TCTAATTAAA
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A

mix-a/MA0621.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:ATGTCTAATTAA--
---NCTAATTAANN
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:ATGTCTAATTAA
----CTAATTAA
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A

LHX9/MA0701.2/Jaspar

Match Rank:4
Score:0.76
Offset:4
Orientation:forward strand
Alignment:ATGTCTAATTAA
----CTAATTAA
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A T C G A

PRRX2/MA0075.3/Jaspar

Match Rank:5
Score:0.75
Offset:4
Orientation:forward strand
Alignment:ATGTCTAATTAA
----CTAATTAA
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A G T C A G C T T G C A C G T A A C G T A C G T T C G A C T G A

ALX3/MA0634.1/Jaspar

Match Rank:6
Score:0.74
Offset:3
Orientation:forward strand
Alignment:ATGTCTAATTAA-
---TCTAATTAAA
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

VSX2/MA0726.1/Jaspar

Match Rank:7
Score:0.74
Offset:4
Orientation:forward strand
Alignment:ATGTCTAATTAA
----CTAATTAG
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

PH0132.1_Pax6/Jaspar

Match Rank:8
Score:0.74
Offset:1
Orientation:forward strand
Alignment:ATGTCTAATTAA-----
-TGATTAATTAATTGAC
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T A G T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T A C G T T A C G C G T A G T A C

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.74
Offset:4
Orientation:forward strand
Alignment:ATGTCTAATTAA
----GTAATTAA
C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A

PH0160.1_Shox2/Jaspar

Match Rank:10
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-ATGTCTAATTAA----
NNNAATTAATTAANNNG
A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T A G C G T C A A G T C T C G A G T C A A G C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A T G C C A T G G T A C A T C G