Information for 2-CCTCTGATCTAA (Motif 2)

A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A
Reverse Opposite:
A C G T A G C T C T G A C T A G C T G A A C G T A G T C C G T A A T C G C T G A C T A G A T C G
p-value:1e-6
log p-value:-1.512e+01
Information Content per bp:1.728
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif116.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets96.0 +/- 50.7bp
Average Position of motif in Background96.1 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCTCTGATCTAA
-TTCTAATCTAT
A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A
A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCTCTGATCTAA-
AATCCCTTTGATCTATC
A C G T A C G T A C G T A C G T A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CCTCTGATCTAA-
ATTTCCTTTGATCTATA
A C G T A C G T A C G T A C G T A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCTCTGATCTAA-
NNTTCCTTTGATCTANA
A C G T A C G T A C G T A C G T A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

PB0083.1_Tcf7_1/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCTCTGATCTAA-
NNTTCCTTTGATCTNNA
A C G T A C G T A C G T A C G T A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTCTGATCTAA
CCTTTGATST--
A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTCTGATCTAA
CCTTTGAWGT--
A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTCTGATCTAA
CCTTTGATGT--
A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T

GFI1/MA0038.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCTCTGATCTAA
TGCAGTGATTTN-
A C G T A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTCTGATCTAA---
NNHYTGACCTAGWTT
A T G C A G T C A G C T A T G C A C G T C T A G C G T A A G C T A G T C A G C T C T G A G T C A A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T