Information for 3-ACTAGCAAGTGA (Motif 3)

G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A
Reverse Opposite:
A C G T G T A C G T C A T G A C G A C T A C G T A C T G A G T C A C G T C G T A C T A G C G A T
p-value:1e-4
log p-value:-1.143e+01
Information Content per bp:1.598
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif666.7
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets106.8 +/- 70.7bp
Average Position of motif in Background99.0 +/- 87.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SNAI1/MA1558.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACTAGCAAGTGA-
---GGCAGGTGCA
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T
A C G T A C G T A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACTAGCAAGTGA-
---RGCAGGTGYA
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T
A C G T A C G T A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACTAGCAAGTGA-
---NNCAGGTGNN
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF4/MA0830.2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACTAGCAAGTGA--
-NNGGCAGGTGCNN
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T A C G T
A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACTAGCAAGTGA--
-NNGGCAGGTGCNN
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T A C G T
A C G T T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

SNAI3/MA1559.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACTAGCAAGTGA-
---AACAGGTGCA
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T
A C G T A C G T A C G T C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACTAGCAAGTGA-
-CTTTGATGTGSB
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T
A C G T A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACTAGCAAGTGA--
--SDGCAGGTGCNS
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACTAGCAAGTGA
---ACCACGTG-
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A
A C G T A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACTAGCAAGTGA-
--NNGCAGGTGNN
G C T A A G T C A C G T C G T A C T A G T A G C T G C A C T G A A C T G A C G T A C T G T G C A A C G T
A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G