Information for 1-TAGTCTTACG (Motif 1)

A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A C G T A A C T G C G T A A G T C A C G T C G T A
p-value:1e-17
log p-value:-4.081e+01
Information Content per bp:1.530
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.4 +/- 18.4bp
Average Position of motif in Background122.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD12/MA0873.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TAGTCTTACG---
--NTTTTACGACT
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

Hoxa11/MA0911.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGTCTTACG---
-ANTTTTACGACC
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

HOXC9/MA0485.2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTCTTACG--
--NTTTTACGAC
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTCTTACG---
--NTTTTACGACC
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXD10/MA1506.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTCTTACG---
--NTTTTACGACC
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

GMEB2/MA0862.1/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TAGTCTTACG---
-----TTACGTAA
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

Gmeb1/MA0615.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGTCTTACG-------
NNNTNGTACGTAANNNN
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

PB0027.1_Gmeb1_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGTCTTACG-------
NNNTNGTACGTAANNNN
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A G T C T C G A G C A T A T G C C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T G C A T G A C C A G T T A G C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAGTCTTACG
TWGTCTGV--
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TAGTCTTACG--
--NTTTTACGAC
A C G T C G T A A C T G A C G T A G T C A C G T A C G T C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C