Information for 5-TGGCGAGCTG (Motif 9)

A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A G T C A C G T A G T C A C T G A G T C A T G C C G T A
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.965
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets127.5 +/- 14.9bp
Average Position of motif in Background32.7 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGGCGAGCTG
-GGCGCGCT-
A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGGCGAGCTG---
---CCAGCTGTTN
A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGGCGAGCTG--
NAGANTGGCGGGGNGNA
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGCGAGCTG---
TTGGCATGGTGCCA
A C G T A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGCGAGCTG--
--NNCAGCTGNN
A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGGCGAGCTG---
---HCAGCTGDTN
A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGGCGAGCTG----
--GCCAGCTGBTNB
A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCGAGCTG-----
GTTGGCACGGTGCCAAC
A C G T A C G T A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A T C G G A C T A C G T A C T G A T C G G T A C C T G A A G T C T A C G T C A G G A C T A C T G A T G C G T A C C G T A C T G A A T G C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGGCGAGCTG--
--GCCATCTGTT
A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCGAGCTG-----
GTTGGCACGGTGCCAGG
A C G T A C G T A C G T A T C G A C T G A G T C A C T G C G T A A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A T C G G C A T A C G T A C T G A C T G G T A C C T G A A G T C A T C G C A T G G A C T A C T G A G T C A G T C G T C A C T A G A T C G