Information for 24-ATAATTCAAGGC (Motif 30)

C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T A C T G C G T A C G T A A C G T A C G T C G T A A C G T
p-value:1e-3
log p-value:-8.382e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background158.9 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ATAATTCAAGGC
ATGCATAATTCA----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATAATTCAAGGC----
-AAGTTCAAGGTCAGC
C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PBX2/MA1113.2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATAATTCAAGGC
GTCATAAATCATT--
A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATAATTCAAGGC
AATAATT------
A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATAATTCAAGGC--
----NTCAAGGTCA
C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATAATTCAAGGC
AAAAGTCAA---
C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATAATTCAAGGC
ATGAATWATTCATGA-
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A A C G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATAATTCAAGGC
NCYATMAATCAY---
A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T A C G T A C G T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATAATTCAAGGC
ATGAATAATTAATG--
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATAATTCAAGGC--
AATCAATTCAATAATT
A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C G T A G T C C G T A C G T A A C T G A C T G A G T C A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T