Information for 7-CTGAATATATGA (Motif 7)

A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C T G
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGAATATATGA-
GGACTGAATTCATGCC
A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGAATATATGA
ATGMATATDC--
A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGAATATATGA-
ACTATGAATGAATGAT
A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTGAATATATGA---
ANNNGGATATATCCNNN
A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTGAATATATGA---
--GAATGAATGAATG
A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTGAATATATGA---
TCTTTATATATAAATA
A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

POU4F1/MA0790.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGAATATATGA--
ATGAATAATTAATG
A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C G T A C G T
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

PB0178.1_Sox8_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CTGAATATATGA
NNTNTCATGAATGT----
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGAATATATGA-
---AACATATGTT
A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGAATATATGA
ATGAATATTC--
A G T C A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C T G C G T A
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T