Information for 12-TGGGAATACTAT (Motif 12)

A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGGGAATACTAT
CCTGGGAAAG----
A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAATACTAT
CSTGGGAAAD----
A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAATACTAT
NNGGGGAATNC---
A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGGGAATACTAT
ATGTGGGAAA-----
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGGGAATACTAT
-GGGATTAN---
A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGGAATACTAT
CCWGGAATGY---
A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGGAATACTAT
AAGGGATTAGAA-
A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGGAATACTAT--
ATTTGCATACAATGG
A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PITX1/MA0682.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGGGAATACTAT
-NGGATTAN---
A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T
A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGGAATACTAT--
AGAGGGGATTAATTTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T