Information for 6-TCGAAGCTAG (Motif 19)

A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A G T C A C G T A C G T A G T C A C T G C G T A
p-value:1e-3
log p-value:-8.962e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets130.0 +/- 0.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCGAAGCTAG
-NGAAGC---
A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TCGAAGCTAG
---AAGCTTG
A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAGCTAG
ATAAACCGAAACCAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PB0034.1_Irf4_1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCGAAGCTAG-
CGTATCGAAACCAAA
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

IRF6/MA1509.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCGAAGCTAG
ACCGAAACT--
A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TCGAAGCTAG---
CTGATCGAAACCAAAGT
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCGAAGCTAG
-CGGAGC---
A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TCGAAGCTAG
ANATCAAAGNN--
A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCGAAGCTAG
CAAAATCGAAACTAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCGAAGCTAG
ACATCAAAGG---
A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A A C T G A G T C A C G T C G T A A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T