Information for 10-AACAGACACCGA (Motif 11)

C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T
p-value:1e-5
log p-value:-1.189e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets157.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AACAGACACCGA
-CCAGACRSVB-
C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

IRF3/MA1418.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AACAGACACCGA-----
GGGAAACGGAAACCGAAACTG
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T A C G T A C G C T A G C T G A C T G A G C T A G T A C A T C G C T A G T C G A C T G A C G T A A T G C A T G C C T A G T G C A G C T A G C T A T A G C A G C T C T A G

Stat2/MA1623.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AACAGACACCGA
AGAAACAGAAACT--
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACAGACACCGA---
ATAAATGACACCTATCA
A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

IRF5/MA1420.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AACAGACACCGA----
--CCGAAACCGAAACT
C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACAGACACCGA
AACCGANA----
C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACAGACACCGA
-CCAGACAG---
C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AACAGACACCGA
-BCAGACWA---
C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AACAGACACCGA
GAGAACCGAAACTG-
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AACAGACACCGA
GGAAANTGAAACTNA
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C T G C G T A
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A