Information for 5-CACAGATAGTAC (Motif 9)

A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A C G T C G T A A C G T A G T C A C G T A C T G A C G T A C T G
p-value:1e-4
log p-value:-9.655e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets136.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACAGATAGTAC
GGACAGATGGCAG
A C G T A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACAGATAGTAC
AACAGATGGT--
A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACAGATAGTAC
GGAACAGATGGCA-
A C G T A C G T A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CACAGATAGTAC--
GVACAGNMTGTYCTB
A C G T A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Ptf1a/MA1618.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACAGATAGTAC
AAACAGATGTTTA
A C G T A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CACAGATAGTAC
RHHCAGAGAGGB-
A C G T A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACAGATAGTAC
AACAGATGGC--
A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CACAGATAGTAC--
GRACAGWMTGTYCTB
A C G T A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACAGATAGTAC------
-ACTCCAAGTACTTGGAA
A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CACAGATAGTAC
AACAGGAAGT--
A G T C C G T A A G T C C G T A A C T G C G T A A C G T C G T A A C T G A C G T C G T A A G T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T