Information for 8-GCTATATGTA (Motif 19)

A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C T G A A C G T C G T A A C G T C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.966
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets83.6 +/- 54.6bp
Average Position of motif in Background109.7 +/- 55.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCTATATGTA-----
AATATACATGTAATATA
A C G T A C G T A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GCTATATGTA--
GCTATTTATAGC
A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCTATATGTA----
NNTATANATATACN
A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCTATATGTA-----
AAAATACATGTAATACT
A C G T A C G T A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTATATGTA
ACCATATGTT
A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTATATGTA--
TCTATTTATAGN
A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTATATGTA--
GCTATTTTTAGC
A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GCTATATGTA----
ANTNTTACATGTATNTA
A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCTATATGTA
-CCATATGT-
A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCTATATGTA--
KCTATTTTTRGH
A C T G A G T C A C G T C G T A A C G T C G T A A G C T A C T G A C G T C G T A A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C