Information for 13-GACCATGCAA (Motif 30)

A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C G T A G T C
p-value:1e-2
log p-value:-6.857e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background69.0 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GACCATGCAA---
--ATATGCAAATT
A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

SOX18/MA1563.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GACCATGCAA
CACAATGC--
A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GACCATGCAA----
-AATATGCAAATAA
A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GACCATGCAA-----
--ATATGCAAATNNN
A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GACCATGCAA---
---TATGCAAATC
A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACCATGCAA-
GGACCACCCACG
A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GACCATGCAA----
--AGATGCAATCCC
A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

CEBPG(var.2)/MA1636.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACCATGCAA----
AAATGATGCAATCAT
A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T C G A C G A T C A T G C T G A G A C T C T A G G T A C G T C A C G T A A G C T G T A C G C T A G A C T

ATF4/MA0833.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACCATGCAA---
AAATGATGCAATAA
A C G T A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GACCATGCAA-----
---TATGCWAATBAV
A C T G C G T A A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G