Information for 19-CTTCTCACACCC (Motif 23)

A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G
p-value:1e-3
log p-value:-8.327e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MGA/MA0801.1/Jaspar

Match Rank:1
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:CTTCTCACACCC
----TCACACCT
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTTCTCACACCC----
NNTTTTCACACCTTNNN
A C G T A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTTCTCACACCC
----TCACACCT
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

TBX18/MA1565.1/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTTCTCACACCC--
--NTTCACACCTCC
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTTCTCACACCC
----TCACACCT
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTTCTCACACCC-
NTTTTCACACCTT
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CTTCTCACACCC
----TCACACCT
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T

TBX3/MA1566.1/Jaspar

Match Rank:8
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTTCTCACACCC-
---NTCACACCTN
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTTCTCACACCC
--TTTCACACCT
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C
A C G T A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

TBX2/MA0688.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTTCTCACACCC-
--TTTCACACCTN
A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C C G T A A G T C A G T C A G T C A C G T
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T