Information for 11-GCTATGGA (Motif 33)

C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A
Reverse Opposite:
C G A T A T G C G T A C C T G A C A G T C G T A A T C G G T A C
p-value:1e-3
log p-value:-8.851e+00
Information Content per bp:1.697
Number of Target Sequences with motif155.0
Percentage of Target Sequences with motif16.52%
Number of Background Sequences with motif6005.2
Percentage of Background Sequences with motif12.41%
Average Position of motif in Targets105.6 +/- 55.9bp
Average Position of motif in Background100.9 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTATGGA-
CGGTTGCTATGGCA
A C G T A C G T A C G T A C G T A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

RFX1/MA0509.2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTATGGA-
CTGTTGCTATGGCA
A C G T A C G T A C G T A C G T A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GCTATGGA-
NNCGTTGCTATGGNN
A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTATGGA-
NNATAAGGNN
A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCTATGGA--
--TATTGAYY
C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T A C G T
A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-10
Orientation:reverse strand
Alignment:----------GCTATGGA-----
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

OSR1/MA1542.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTATGGA-
TGCTACTGTT
A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T
G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

SOX2/MA0143.4/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTATGGA-
AAACAATGGAA
A C G T A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTATGGA--
-CCATTGTTC
C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T A C G T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTATGGA-
TTCTNMGGAA
A C G T C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A A C G T
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A