Information for 9-GCAAABTGGAHH (Motif 11)

T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A
Reverse Opposite:
C A G T C G T A A C G T A T G C A G T C C G T A T A G C A G C T A G C T A C G T C T A G A T G C
p-value:1e-4
log p-value:-1.143e+01
Information Content per bp:1.717
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif702.3
Percentage of Background Sequences with motif1.04%
Average Position of motif in Targets116.5 +/- 36.4bp
Average Position of motif in Background96.4 +/- 70.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCAAABTGGAHH-
GAAAAAATTGCAAGG
A C G T A C G T T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAAABTGGAHH
TCCAAAGTCCAAA
A C G T T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAAABTGGAHH
TCCAAAGTCCAGA
A C G T T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCAAABTGGAHH
-----GTGGAT-
T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCAAABTGGAHH--
----AATGGAAAAT
T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCAAABTGGAHH
-TTRAGTGSYK-
T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAAABTGGAHH
-TTAAGTGC---
T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A
A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GCAAABTGGAHH
CANAGNNCAAAGTCCA--
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCAAABTGGAHH------
--NNATTGGACTTTNGNN
T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCAAABTGGAHH-
------TGGAAAA
T A C G A G T C C G T A C T G A C T G A A C T G A C G T A C T G A T C G C G T A G A C T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A