Information for 8-AATGAGCATCAG (Motif 20)

C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C G T A C T G A G T C A C G T A G T C C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.307e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background28.6 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGCATCAG--
TAGTGATCATCATTA
A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATGAGCATCAG
ATAATGAGGT----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AATGAGCATCAG
NTAATGAGCT----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AATGAGCATCAG
GACGATAATGAGCTTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGCATCAG
TAATTTGCATAA-
A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGCATCAG
AAATTAGCATAAT
A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATGAGCATCAG
TAATTTGCATAA-
A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATGAGCATCAG
BTVATTWGCATA--
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AATGAGCATCAG
AAACATAATGAGGTTGC-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATGAGCATCAG
TCAATGACCTA---
A C G T A C G T C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C T G
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A A C G T A C G T A C G T