Information for 17-ATAGCACGGC (Motif 28)

C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A C G T A C T G A G T C A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background114.4 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFI1/MA0038.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATAGCACGGC-
CAAATCACTGCA
A C G T C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T
A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATAGCACGGC-
---GCACGTNC
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATAGCACGGC--
NHRTCACGACDN
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATAGCACGGC------
AATCGCACTGCATTCCG
A C G T C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATAGCACGGC-
---GCACGTAY
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T
A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

HIF1A/MA1106.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATAGCACGGC-
-NNGCACGTNC
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T
A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATAGCACGGC
--AGCGCGCC
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ATAGCACGGC
--BGCACGTA
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATAGCACGGC-
-TBGCACGCAA
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATAGCACGGC---
---GCACGTACCC
C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C