Information for 1-AGTACRCATC (Motif 3)

C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C
Reverse Opposite:
A C T G C G T A C A G T A T C G A G C T A C T G A C G T G T C A A G T C A C G T
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.879
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif69.4
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets107.7 +/- 64.5bp
Average Position of motif in Background86.6 +/- 75.6bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1/MA0148.4/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGTACRCATC-
ATGTAAACATGT
A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C A C G T
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGTACRCATC-
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGTACRCATC---
TTNGGGTACGCCNNANN
A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

FOXA2/MA0047.3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGTACRCATC
ATGTAAACATA
A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C
C T G A C G A T C T A G G C A T G T C A G T C A G C T A A G T C G C T A G C A T C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTACRCATC
SSAATCCACANN
A C G T A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGTACRCATC--
NNGTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

FOXP1/MA0481.3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTACRCATC
ATGTAAACATA
A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C
C G T A C G A T C T A G C G A T G T C A G T C A G C T A A G T C G C T A G C A T G C T A

FOXA3/MA1683.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGTACRCATC
ATGTAAACATA
A C G T C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C
C T G A C G A T C T A G G A C T G T C A G T C A G C T A A G T C G C T A C G A T C G T A

FOXD1/MA0031.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTACRCATC
-GTAAACAT-
C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C
A C G T A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTACRCATC
-GTAAACAA-
C G T A A C T G A C G T C G T A A G T C C T G A A T G C G T C A C G A T A G T C
A C G T C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T