Information for 4-TGTGCATG (Motif 26)

G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G
Reverse Opposite:
G T A C G T C A A C G T A C T G T A G C G T C A A G T C C T G A
p-value:1e-5
log p-value:-1.290e+01
Information Content per bp:1.801
Number of Target Sequences with motif142.0
Percentage of Target Sequences with motif15.14%
Number of Background Sequences with motif4980.9
Percentage of Background Sequences with motif10.30%
Average Position of motif in Targets103.6 +/- 53.8bp
Average Position of motif in Background98.4 +/- 67.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCATG-
NATTTGCATNN
A C G T A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCATG-
CTGTTCCTGG
A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTGCATG---
TGTGGATTNNN
G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T A C G T A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGTGCATG-
TTCATTTGCATAT
A C G T A C G T A C G T A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGTGCATG---
GTGCGCATGCGC
A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T A C G T A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGTGCATG--
NNTGTGGATTSS
A C G T A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCATG-
NNNNTTGTGTGCTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

POU2F3/MA0627.2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCATG--
NNATTTGCATATN
A C G T A C G T A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T A C G T
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCATG
GHATATKCAT-
A C G T A C G T A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTGCATG---
CTGCGCATGCGC
A C G T G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G A C G T A C G T A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C