Information for 11-GCACTTATGC (Motif 30)

A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T C G T A C G T A A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.079e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background99.1 +/- 46.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISL2/MA0914.1/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GCACTTATGC
GCACTTAA--
A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCACTTATGC
ACCACTTAA--
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCACTTATGC
ATAACCACTTAAA-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCACTTATGC
AAGCACTTAA--
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCACTTATGC--
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCACTTATGC
ACCACTTGAA-
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCACTTATGC
RSCACTYRAG-
A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCACTTATGC--
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCACTTATGC
AASCACTCAA--
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCACTTATGC
CCACTTGAA-
A C T G A G T C C G T A A G T C A C G T A C G T C G T A A C G T A C T G A G T C
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T