Information for 11-GTCACTCGCAAA (Motif 12)

A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.075e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCACTCGCAAA--
CAATCACTGGCAGAAT
A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GTCACTCGCAAA
NNGCTGTCACTCANN--
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTCACTCGCAAA--
---GCTCGTAAAAA
A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCACTCGCAAA----
AAACCTCGTAAAATTT
A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

TCFL5/MA0632.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCACTCGCAAA
-TCACGCGCAC-
A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A
A C G T A C G T A G T C C T G A A G T C C T A G G A T C T C A G T A G C G T C A G T A C A C G T

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTCACTCGCAAA
NNNCCTGTCACTCANNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCACTCGCAAA
AGTCACGC-----
A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCACTCGCAAA
-TBGCACGCAA-
A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A
A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTCACTCGCAAA--
---AGTCGTAAAAA
A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PAX5/MA0014.3/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCACTCGCAAA
NNGGTCACGCTC---
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A C G T A C G T A
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T A C G T A C G T