Information for 3-GCTGAGCWTRAT (Motif 3)

A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
Reverse Opposite:
C G T A A C G T A G C T C T G A C G A T A C T G A G T C C G A T A T G C C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.668e+01
Information Content per bp:1.842
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets81.0 +/- 45.1bp
Average Position of motif in Background103.5 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGCWTRAT
NGCTN--------
A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGCWTRAT
CCTGCTGAGH-----
A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGCWTRAT
NNTCCTGCTGTGNNN---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTGAGCWTRAT
WDNCTGGGCA----
A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGCWTRAT
TGCTGTGATTT--
A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTGAGCWTRAT
GCTGTG------
A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCTGAGCWTRAT
GCAGTGATTT--
A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCTGAGCWTRAT
--TGACCTTGAT
A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Zic2/MA1629.1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCTGAGCWTRAT
CCCCCTGCTGTGNN----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCTGAGCWTRAT---
GCTGACCTTGAACTN
A C T G A G T C A C G T A T C G C G T A A C T G A G T C C G T A A G C T C T G A C G T A C G A T A C G T A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T