Information for 25-CTGCAVABCT (Motif 39)

A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
Reverse Opposite:
C T G A C T A G T A G C A C G T A C T G C G A T A C T G A T G C C G T A A C T G
p-value:1e-2
log p-value:-6.212e+00
Information Content per bp:1.783
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif5.38%
Number of Background Sequences with motif1002.3
Percentage of Background Sequences with motif2.19%
Average Position of motif in Targets69.4 +/- 49.2bp
Average Position of motif in Background98.8 +/- 62.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CTGCAVABCT
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGCAVABCT-
CTTCACACCTA
A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

ZNF317/MA1593.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CTGCAVABCT
TAACAGCAGACT-
A C G T A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGCAVABCT
TATGCAAATC-
A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGCAVABCT
ATATGCAAATT-
A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGCAVABCT
AATATGCAAATAA
A C G T A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CTGCAVABCT-
NNGTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

CEBPD/MA0836.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCAVABCT-
TATTGCACAATAT
A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T A C G T
C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAVABCT
TTATGCAAAT--
A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCAVABCT
ATATGCAAAT--
A C G T A C G T A G T C C G A T A T C G A G T C C G T A T G A C C G T A A T C G A G T C A G C T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T