Information for 21-GCCAAATCAATG (Motif 29)

A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.604e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background128.1 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GCCAAATCAATG
-HNRAATCAAT-
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCAAATCAATG----
AAAAAATCAATAAATA
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

GFI1/MA0038.2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCCAAATCAATG--
--CAAATCACTGCA
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCAAATCAATG---
CGACCCAATCAACGGTG
A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GCCAAATCAATG
----RRTCAATA
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G
A C G T A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCCAAATCAATG
VSCACATCAAAG
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCCAAATCAATG-
---TAATCAATTA
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCAAATCAATG-
---AAATCACTGC
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCAAATCAATG--
---AAATCACAGCA
A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCAAATCAATG--
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A