Information for 9-CAGATGGATATA (Motif 11)

A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T A G T C A G T C C G T A A C G T A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.910e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.6 +/- 44.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----CAGATGGATATA
GGAACAGATGGCA---
A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CAGATGGATATA
GGACAGATGGCAG--
A C G T A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CAGATGGATATA------
-ANNNGGATATATCCNNN
A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGATGGATATA
ACCAGATGGC----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGATATA
AACAGATGGT----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGATATA
AACAGATGGC----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CAGATGGATATA--
---AAGGATATNTN
A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGATATA
AACAKATGGY----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAGATGGATATA-
---ATGMATATDC
A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGATGGATATA
DMCAGATGKS----
A C G T A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A
C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T