Information for 3-TTTGTACG (Motif 35)

A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T C G T A A G T C C G T A C G T A C G T A
p-value:1e-2
log p-value:-5.195e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif421.2
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets130.0 +/- 0.0bp
Average Position of motif in Background102.0 +/- 138.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTACG
NCCTTTGTTC-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTTGTACG-
BCCWTTGTBYKV
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTACG
NNCTTTGTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTGTACG
YCTTTGTTCC
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTGTACG---
NTTTTACGACT
A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTTGTACG
CCWTTGTYYB
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTGTACG---
NTTTTACGACC
A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

SOX12/MA1561.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTACG--
NATTGTTCGGT
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTGTACG
CCTTTGTTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

HOXD10/MA1506.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTGTACG---
NTTTTACGACC
A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C T G A C G T A C G T A C G T
C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C