Information for 5-AGCAGGGATT (Motif 22)

C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T
Reverse Opposite:
C G T A G T C A C G A T T G A C A G T C G T A C C G A T T A C G A T G C A G C T
p-value:1e-10
log p-value:-2.344e+01
Information Content per bp:1.827
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.31%
Number of Background Sequences with motif331.1
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets105.2 +/- 57.8bp
Average Position of motif in Background101.7 +/- 55.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:AGCAGGGATT-
-GCAGTGATTT
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T
A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGCAGGGATT-
TGCTGTGATTT
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

GFI1/MA0038.2/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGCAGGGATT--
TGCAGTGATTTN
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T A C G T
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G

PH0125.1_Obox5_2/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGCAGGGATT-------
NANAGGGATTAATTATN
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PITX2/MA1547.1/Jaspar

Match Rank:5
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AGCAGGGATT--
----GGGATTAN
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:AGCAGGGATT-
---NGGGATTA
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGCAGGGATT-------
AGAGGGGATTAATTTAT
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

OTX2/MA0712.2/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGCAGGGATT----
--AAGGGATTAGAA
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AGCAGGGATT---
---VRGGATTARN
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCAGGGATT-------
TGTAGGGATTAATTGTC
C T G A T A C G A T G C C G T A C A T G C T A G A C T G G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C