Information for 10-AGCAGTTTGATT (Motif 13)

C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-9.181e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets155.0 +/- 0.0bp
Average Position of motif in Background123.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:AGCAGTTTGATT--
------TTGATTGN
C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTTTGATT
BRRCVGTTDN---
A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:AGCAGTTTGATT
-----TTTAAT-
C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

PHOX2B/MA0681.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGTTTGATT---
NNATAATTTGATTANN
A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCAGTTTGATT
TGGCAGTTGG---
A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AGCAGTTTGATT----
----NTTTCATTRCHD
C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGCAGTTTGATT-----
-NNANTTTTATTGGNNN
C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGCAGTTTGATT-----
-----TTTGATTGATGN
C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGCAGTTTGATT---
-----ATTGATTYND
C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGCAGTTTGATT
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G