Information for 15-TTGGGCACAGGA (Motif 20)

A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G A C G T A C T G A G T C A G T C A G T C C G T A C G T A
p-value:1e-3
log p-value:-8.231e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTGGGCACAGGA
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGCACAGGA
NGTGGGCAT----
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TTGGGCACAGGA---
-----AACAGGAAGT
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGGCACAGGA--
TAGGGCAAAGGTCA
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGGGCACAGGA--
TGGGGCAAAGGTCA
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGGGCACAGGA--
GTAGGGCAAAGGTCA
A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

IKZF1/MA1508.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTGGGCACAGGA---
---GAAACAGGAAGT
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C G A T G C A T C G A T A G C C G T A C T A G T C A G T C G A C G T A T C A G A G C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TTGGGCACAGGA-
---GTCACATGAY
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A A C G T
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTGGGCACAGGA
-----CACAGN-
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTGGGCACAGGA---
-----NACAGGAAAT
A C G T A C G T A C T G A C T G A C T G A G T C C G T A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T