Information for 2-TYTAACTACTCT (Motif 2)

A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T
Reverse Opposite:
C G T A A C T G C T G A C T A G A C G T C T G A A C T G A G C T A G C T T C G A C T A G C G T A
p-value:1e-6
log p-value:-1.597e+01
Information Content per bp:1.733
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif35.71%
Number of Background Sequences with motif680.3
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets111.4 +/- 38.9bp
Average Position of motif in Background102.8 +/- 71.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TYTAACTACTCT
--CACCTACTAT
A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T
A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TYTAACTACTCT---
NATTTAAGTACTTANNA
A C G T A C G T A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TYTAACTACTCT----
TNNTGCTACTGTNNNN
A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PH0116.1_Nkx2-9/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TYTAACTACTCT---
NATTTAAGTACTTNAAA
A C G T A C G T A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

GATA1/MA0035.4/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TYTAACTACTCT--
---TTCTAATCTAT
A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TYTAACTACTCT----
TTCNAAGTACTTNNNNN
A C G T A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TYTAACTACTCT----
CNNNGCTACTGTANNN
A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

HMBOX1/MA0895.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TYTAACTACTCT
GTTAACTAGN--
A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TYTAACTACTCT--
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

OSR1/MA1542.1/Jaspar

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TYTAACTACTCT-
---TGCTACTGTT
A C G T A G T C A C G T C T G A C T G A G T A C A G C T G T C A A G T C A G C T G T A C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T