Information for 11-GCCTTGACCTCA (Motif 17)

A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G A C G T A G T C C G T A C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.928e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTGACCTCA
TGACCTTGACCT--
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTGACCTCA
TGACCTTGACCT--
A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.75
Offset:4
Orientation:reverse strand
Alignment:GCCTTGACCTCA
----TGACCTYA
A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

ZNF135/MA1587.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCCTTGACCTCA---
-CCTCGACCTCCTGA
A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A G T C A G T C A G C T A G T C T C A G C T G A T A G C A G T C A G C T A T G C G A T C G A C T T C A G C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCTTGACCTCA----
TGTCGTGACCCCTTAAT
A C G T A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTGACCTCA
GCTGACCTTGAACTN-
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:GCCTTGACCTCA
----TGACCYCT
A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

ATF2/MA1632.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCCTTGACCTCA---
--NATGACNTCATNN
A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GCCTTGACCTCA
---NTGACCTCN
A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GCCTTGACCTCA----
----TGACCYYTGVYN
A C T G A G T C A G T C A C G T A C G T A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C