| p-value: | 1e-3 |
| log p-value: | -7.363e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.69% |
| Number of Background Sequences with motif | 3.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 26.0 +/- 0.0bp |
| Average Position of motif in Background | 99.6 +/- 33.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0053.1_Rara_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTGACCATTC--- NNNGTGACCTTTGNNN |
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PB0049.1_Nr2f2_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTGACCATTC--- NNNNTGACCTTTNNNN |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
| Match Rank: | 3 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GTGACCATTC--- -TGACCTTTNCNT |
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|
|
NR4A1/MA1112.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.72 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTGACCATTC- NNTGACCTTTNN |
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|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTGACCATTC NNTGACCTTTN |
|
|
|
NR4A2/MA0160.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTGACCATTC GTGACCTT-- |
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|
|
NR2F1/MA0017.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTGACCATTC CNNTTGACCTTTG |
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|
|
PAX5/MA0014.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTGACCATTC GAGCGTGACCCC-- |
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|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTGACCATTC--- -TGACCYYTGVYN |
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|
|
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTGACCATTC--- -TGACCTYTGVMC |
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