Information for 1-TGGAGTGGATGC (Motif 1)

A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A A C G T A G T C A G T C C G T A A G T C A C G T A G T C A G T C G T C A
p-value:1e-14
log p-value:-3.265e+01
Information Content per bp:1.943
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets145.5 +/- 42.0bp
Average Position of motif in Background109.0 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGGAGTGGATGC
NNNTTGAGTGGNNN-
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGGAGTGGATGC
----GTGGAT--
A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGGAGTGGATGC
BTBRAGTGSN---
A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGGATGC
CTTGAGTGGCT--
A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGGAGTGGATGC
TTRAGTGSYK--
A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGGAGTGGATGC
TTGAGTGSTT--
A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGGATGC
CTYRAGTGSY---
A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGGAGTGGATGC
NTCAAGTGG----
A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGTGGATGC
NNTTGAGTGNN---
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGGAGTGGATGC
GTGAGTGNAC--
A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C T G C G T A A C G T A C T G G T A C
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T