Information for 17-AGATGTCTATGT (Motif 25)

C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.376e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets15.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTCTATGT
GACAGAGATATCAGTGT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGATGTCTATGT-
NNAGATNVNWATCTN
A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

TWIST1/MA1123.2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGATGTCTATGT
ATTCCAGATGTTT----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T A C G T A C G T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGATGTCTATGT
ACCAGATGGC-----
A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGATGTCTATGT
AAGGCCAGATGGTCCGG-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGATGTCTATGT-
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGATGTCTATGT
AAACAGATGTTTA---
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A A C G T A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGATGTCTATGT
---TGTTTATTT
C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGATGTCTATGT
AGGVNCCTTTGT
C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGATGTCTATGT--
--NTGTTTAYATWW
C G T A A C T G C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A