| p-value: | 1e-7 |
| log p-value: | -1.694e+01 |
| Information Content per bp: | 1.656 |
| Number of Target Sequences with motif | 78.0 |
| Percentage of Target Sequences with motif | 7.41% |
| Number of Background Sequences with motif | 1824.9 |
| Percentage of Background Sequences with motif | 3.83% |
| Average Position of motif in Targets | 91.0 +/- 52.6bp |
| Average Position of motif in Background | 99.4 +/- 59.7bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.13 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGATGGATGG TGATKGATGR |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGATGGATGG- ATGATKGATGRC |
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MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGATGGATGG- NNTGATTGATGNN |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGATGGATGG-- TGATTRATGGCY |
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PBX1/MA0070.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGATGGATGG TTTGATTGATGN |
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|
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGATGGATGG TGATTGATGA |
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|
|
PB0098.1_Zfp410_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------GGATGGATGG TATTATGGGATGGATAA |
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PH0134.1_Pbx1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -7 |
| Orientation: | reverse strand |
| Alignment: | -------GGATGGATGG NNNNNATTGATGNGTGN |
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PB0167.1_Sox13_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGATGGATGG------ GTATTGGGTGGGTAATT |
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KLF17/MA1514.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GGATGGATGG-- AAGGGGTGCGTGGTG |
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