Information for 2-AGGGATGGAGAG (Motif 2)

C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T G T A C C G A T A G T C G A T C C G T A C G A T G T A C G T A C A G T C C G A T
p-value:1e-14
log p-value:-3.348e+01
Information Content per bp:1.851
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif59.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets105.9 +/- 65.6bp
Average Position of motif in Background83.3 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGGGATGGAGAG
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

ZNF684/MA1600.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGGATGGAGAG---
TAAAGGGGTGGACTGTAT
A C G T A C G T A C G T C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A G C T G T C A C T G A C G T A C T A G C T A G A C T G T A C G G C A T C T A G A T C G T G C A T A G C G C A T C T A G A G C T T C G A G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:AGGGATGGAGAG--
----BTBRAGTGSN
C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGGGATGGAGAG----
-NNNACCGAGAGTNNN
C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGGATGGAGAG----
-TTGACCGAGAATTCC
C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGGGATGGAGAG-
---AATGGAAAAT
C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AGGGATGGAGAG
NNTNAGGGGCGGNNNN
A C G T A C G T A C G T A C G T C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGGGATGGAGAG---
-----TTGAGTGSTT
C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ZNF460/MA1596.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGGGATGGAGAG--
CTCGGGAGGCTGAGGC
A C G T A C G T C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G A C G T A C G T
A G T C A G C T A G T C T C A G T A C G T A C G G T C A T A C G T C A G G A T C A C G T T A C G T C G A T A C G T A C G A G T C

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGGGATGGAGAG
TGGAATGYRG--
C G T A C T A G C A T G A C T G C G T A C G A T C T A G C T A G C G T A A C T G C G T A A C T G
G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G A C G T A C G T