Information for 1-GATGGTCCGA (Motif 2)

A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G C G T A A G T C A G T C C G T A A C G T A G T C
p-value:1e-4
log p-value:-9.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GATGGTCCGA
TWVGGTCCGC
A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GATGGTCCGA--
NNANTGGTGGTCTTNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GATGGTCCGA
CGTGGGTGGTCC--
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GATGGTCCGA
AAGGCCAGATGGTCCGG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GATGGTCCGA
---GCTCCG-
A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GATGGTCCGA
GGAACAGATGGCA---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GATGGTCCGA
AACAGATGGTCN--
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GATGGTCCGA
AACAGATGGT----
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GATGGTCCGA
GGACAGATGGCAG--
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GATGGTCCGA-
-ATGGGGTGAT
A C T G C G T A A C G T A C T G A C T G A C G T A G T C A G T C A C T G C G T A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T