Information for 4-ACTCAACT (Motif 28)

C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T A C T G C G T A A C T G A C G T
p-value:1e-4
log p-value:-9.483e+00
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif291.5
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets97.2 +/- 52.1bp
Average Position of motif in Background99.0 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---ACTCAACT
ACCACTCAAAA
A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

NKX2-2/MA1645.1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----ACTCAACT-
TAACCACTCAAGAA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

MYB/MA0100.3/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:ACTCAACT---
-ACCAACTGTC
C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACT
AGCCACTCAAG-
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACT
GTACACTCAC--
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACTCAACT
RSCACTYRAG-
A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACT
AASCACTCAA--
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACTCAACT
NSCACTYVAV-
A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACTCAACT
MRSCACTYAA--
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

BATF3/MA0835.2/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTCAACT
TATGACTCATA-
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A G T C C G T A C G T A A G T C A C G T
C G A T G T C A G C A T C A T G G C T A A T G C C G A T G T A C C G T A C G A T G C T A A C G T