Information for 23-GGTCTATCCC (Motif 32)

A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A G T C
p-value:1e-2
log p-value:-5.915e+00
Information Content per bp:1.966
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets125.8 +/- 51.9bp
Average Position of motif in Background93.0 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTCTATCCC-
TGGTACATTCCA
A C G T A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C A C G T
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A

ZSCAN29/MA1602.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTCTATCCC--
CGTCTACACGGG
A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTCTATCCC
RRTCAATA--
A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCTATCCC
GGGGATTTCC-
A C G T A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTCTATCCC--
TGTCTGDCACCT
A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGTCTATCCC-
AGGTCTCTAACC
A C G T A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTCTATCCC------
NNNTCCATCCCATAANN
A C G T A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

SMAD5/MA1557.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGTCTATCCC
TGTCTAGACA
A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C
C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTCTATCCC
CGTCTAGACA
A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGTCTATCCC
GGGAATTTCC-
A C G T A C T G A C T G A C G T A G T C A C G T C G T A A C G T G T A C A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T