Information for 18-CAAAATATTGAG (Motif 23)

A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.817e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background103.2 +/- 39.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAAAATATTGAG---
-CTAATATTGCTAAA
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAAAATATTGAG---
-CTAATATTGCTAAA
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAAAATATTGAG----
NAAANTTATTGAANCAN
A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAAATATTGAG-----
AAACATAATGAGGTTGC
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAAAATATTGAG-
-----TATTGAYY
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAAATATTGAG-----
GACGATAATGAGCTTGC
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAAAATATTGAG--
----ATAATGAGGT
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAAATATTGAG
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CAAAATATTGAG
--AATTATT---
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAAAATATTGAG--
----NTAATGAGCT
A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T