| p-value: | 1e-9 |
| log p-value: | -2.299e+01 |
| Information Content per bp: | 1.829 |
| Number of Target Sequences with motif | 25.0 |
| Percentage of Target Sequences with motif | 3.46% |
| Number of Background Sequences with motif | 328.3 |
| Percentage of Background Sequences with motif | 0.69% |
| Average Position of motif in Targets | 83.8 +/- 51.4bp |
| Average Position of motif in Background | 104.6 +/- 60.5bp |
| Strand Bias (log2 ratio + to - strand density) | -0.8 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCATACTTCA YCATCMATCA |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCATACTTCA GGCCATAAATCA |
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|
|
PBX2/MA1113.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCATACTTCA-- GTCATAAATCATT |
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|
|
MEIS2(var.2)/MA1640.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCATACTTCA--- NNCCATAAATCATNN |
|
|
|
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCATACTTCA- NCYATMAATCAY |
|
|
|
MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCATACTTCA-- GTCATCAATCATT |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCATACTTCA- GYCATCMATCAT |
|
|
|
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCATACTTCA ATGCATAATTCA |
|
|
|
NR1I3/MA1534.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CCATACTTCA- --AAAGTTCAT |
|
|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCATACTTCA------- TCACCCATCAATAAACA |
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