Information for 4-TGCGAGTGAC (Motif 27)

A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.113e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background84.4 +/- 81.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCGAGTGAC-----
TTTGAGTGACAGCTA
A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

TCFL5/MA0632.2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCGAGTGAC
GTGCGCGTGA-
A C G T A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C
C A T G C A G T A T C G A G T C C T A G A G T C C T A G G A C T A C T G T G C A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TGCGAGTGAC--
NNNNTGCCAGTGATTG
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGCGAGTGAC------
GGGTGAGTGACAGGCGG
A C G T A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TGCGAGTGAC-
---NCGTGACN
A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

PAX5/MA0014.3/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCGAGTGAC---
-GAGCGTGACCCC
A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCGAGTGAC---
-NTGATTGACAGN
A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGCGAGTGAC---
-BTGABTGACAGS
A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCGAGTGAC-
-GTGAGTGNAC
A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T
A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCGAGTGAC----
--TGAGTGACAGSC
A C G T A C T G A G T C A C T G C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C