Information for 3-CAGAGGNATCTT (Motif 3)

G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C G T A G T C A T G C G T A C C G A T G T A C C A G T C A T G
p-value:1e-6
log p-value:-1.456e+01
Information Content per bp:1.709
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif281.9
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets64.3 +/- 26.9bp
Average Position of motif in Background96.8 +/- 92.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGAGGNATCTT----
GATGGGGTATCATTTTT
A C G T G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PROX1/MA0794.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGAGGNATCTT-
-TAAGGCGTCTTG
G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T
A C G T A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGGNATCTT----
TNNNNGGTGTCATNTNT
A C G T G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0126.1_Gata5_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGAGGNATCTT---
GACAGAGATATCAGTGT
A C G T A C G T G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGAGGNATCTT----
AATAGGGTATCATATAT
A C G T G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

NFE2/MA0841.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAGAGGNATCTT-
--GATGAGTCATN
G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T
A C G T A C G T T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

ZNF274/MA1592.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGGNATCTT---
NNCGAGAACTCATACN
A C G T G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T A C G T A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGAGGNATCTT
---ATGACTCAT
G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T
A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGAGGNATCTT----
AATAGGGTATCAATATT
A C G T G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGAGGNATCTT
-CCWGGAATGY-
G A T C G T C A A C T G C G T A A C T G A T C G A C T G G T C A A C G T A G T C C G A T A C G T
A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T