| p-value: | 1e-13 |
| log p-value: | -3.069e+01 |
| Information Content per bp: | 1.749 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.68% |
| Number of Background Sequences with motif | 3.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 110.8 +/- 47.8bp |
| Average Position of motif in Background | 104.0 +/- 28.5bp |
| Strand Bias (log2 ratio + to - strand density) | 4.0 |
| Multiplicity (# of sites on avg that occur together) | 2.43 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATMACYTACCTA-- TTGACCTANTTATN |
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|
SD0001.1_at_AC_acceptor/Jaspar
| Match Rank: | 2 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATMACYTACCTA -NNACTTACCTN |
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|
ZKSCAN5/MA1652.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATMACYTACCTA NNCTCACCTCCTNN |
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|
RORC/MA1151.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATMACYTACCTA- -TGACCTANTTAN |
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|
|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 5 |
| Score: | 0.55 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATMACYTACCTA ATAACCACTTAAA-- |
|
|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATMACYTACCTA- CATAACCACTTAACAAC |
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|
|
TEAD2/MA1121.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATMACYTACCTA-- -TCACATTCCAGCC |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATMACYTACCTA -TGACCTARTT- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATMACYTACCTA -TGACCTARTT- |
|
|
|
RORA/MA0071.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATMACYTACCTA -TGACCTTGAT- |
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