Information for 11-TCCTCAATGGCC (Motif 23)

A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C T G A C T G C G T A
p-value:1e-3
log p-value:-8.138e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TCCTCAATGGCC--
--CTCATTGGCCAG
A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

NR1H4/MA1110.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:forward strand
Alignment:TCCTCAATGGCC--
---TCAATGACCTA
A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTCAATGGCC
--CCGATTGGCT
A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTCAATGGCC
--GTTAATGGCC
A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C
A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCCTCAATGGCC---
---TGATTGGCTANN
A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCTCAATGGCC---
NNTNNACAATGGGANNN
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCTCAATGGCC
-AAACAATGGCA
A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

RUNX3/MA0684.2/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TCCTCAATGGCC
AAAACCTCAAAT---
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCTCAATGGCC
--CACAATGC--
A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C
A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCCTCAATGGCC-
CTCACACAATGGCGC
A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C