Information for 4-CAGGTGCCGG (Motif 9)

A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C T G
p-value:1e-3
log p-value:-8.771e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF4/MA0830.2/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----CAGGTGCCGG
NNGGCAGGTGCNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGCCGG
SDGCAGGTGCNS-
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:3
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CAGGTGCCGG
NNGGCAGGTGCNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCCGG
NNCAGGTGNN--
A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:5
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----CAGGTGCCGG
NNGACAGGTGCNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGCCGG
NNGCAGGTGNN--
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:7
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----CAGGTGCCGG
NNGACAGGTGCNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGCCGG
GGCAGGTGCA--
A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTGCCGG--
ATCCACAGGTGCGAAAA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCCGG
RGCAGGTGYA--
A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A G T C A C T G A C T G
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T A C G T