Information for 19-GAGGTCATCACA (Motif 37)

A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C G T A A C G T A C T G C G T A A G T C A G T C A C G T A G T C
p-value:1e-3
log p-value:-6.987e+00
Information Content per bp:1.972
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets83.7 +/- 53.5bp
Average Position of motif in Background98.9 +/- 17.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCATCACA
AGRGGTCA-----
A C G T A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCATCACA
TRAGGTCA-----
A C G T A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAGGTCATCACA--
GAGGTCATGACCTC
A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

NR2C1/MA1535.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GAGGTCATCACA
CGAGGTCAC----
A C G T A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTCATCACA
GKBCARAGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GAGGTCATCACA
NRBCARRGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGGTCATCACA--
GAGGTCATGACCTC
A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A A C G T A C G T
T C A G C T G A C A T G C A T G A C G T A G T C C T G A A G C T T C A G T G C A T G A C G T A C A G C T A G T C

ATF2/MA1632.1/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GAGGTCATCACA
AAATGAGGTCATT---
A C G T A C G T A C G T A C G T A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T A C G T A C G T A C G T

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGGTCATCACA
ATGACGTCATCN--
A C G T A C G T A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAGGTCATCACA
GAGGTCAT----
A C T G C G T A A C T G C T A G A C G T A G T C C G T A A C G T A G T C C G T A A G T C C G T A
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T