Information for 5-GGTACRKTGV (Motif 15)

A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G
Reverse Opposite:
A T G C A G T C C G T A T G C A A G C T A C T G A C G T C G T A G T A C A G T C
p-value:1e-10
log p-value:-2.495e+01
Information Content per bp:1.759
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets93.1 +/- 41.8bp
Average Position of motif in Background84.4 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRTA2/MA1478.1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGTACRKTGV
AATTGTTACATT--
A C G T A C G T A C G T A C G T A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGTACRKTGV--
-AAACAATGGCA
A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G A C G T A C G T
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGTACRKTGV--
-AAACAATGGAA
A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G A C G T A C G T
A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Dmrt1/MA1603.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGTACRKTGV---
GNTACTTTGTATC
A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G A C G T A C G T A C G T
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTACRKTGV---
YDGHTACAWTGTADC
A C G T A C G T A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGTACRKTGV---
TWGHWACAWTGTWDC
A C G T A C G T A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTACRKTGV
CCAGGAACAG---
A C G T A C G T A C G T A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGTACRKTGV
NTTGATACATT--
A C G T A C G T A C G T A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTACRKTGV
--CACAATGC
A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G
A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTACRKTGV
VVRRAACAATGG
A C G T A C G T A C T G A C T G G C A T C G T A A G T C T C G A A C G T A C G T A C T G T A C G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G