Information for 4-GCACGTGCATGC (Motif 5)

C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
Reverse Opposite:
T C A G G A T C T C G A A C G T T A C G A G T C T G C A A G T C T C A G C G A T T C A G G T A C
p-value:1e-12
log p-value:-2.912e+01
Information Content per bp:1.731
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif102.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets111.4 +/- 41.3bp
Average Position of motif in Background93.6 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOHLH2/MA1560.1/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGCATGC
CGCACGTGCA---
A C G T C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GCACGTGCATGC
NGKCACGTGM----
A C G T A C G T C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:3
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCACGTGCATGC
GTACGTGCCC--
C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C A C G T A C G T

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCACGTGCATGC
NGKCACGTGM----
A C G T A C G T C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
T C A G T A C G C A G T T G A C C G T A A G T C T C A G G C A T A C T G G T A C A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGCATGC
ACCACGTGCC---
A C G T C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCACGTGCATGC
-CACGTGBN---
C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCACGTGCATGC
NACACGTGCN---
A C G T C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCACGTGCATGC
GGACGTGC----
C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCACGTGCATGC
NNCCACGTGG----
A C G T A C G T C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGCATGC
GNCACGTG-----
A C G T C A T G A G T C C G T A A G T C T C A G A C G T A C T G A T G C C G T A A G C T C T A G A G T C
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T