Information for 18-AGGATTTACC (Motif 36)

C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A C G T A C G T A A C G T A G T C A G T C A C G T
p-value:1e-3
log p-value:-7.082e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif29.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background96.9 +/- 119.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGGATTTACC
VRGGATTARN-
A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGGATTTACC---
TGAAGGGATTAATCATC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AGGATTTACC-
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGATTTACC
GGGAATTTCC
C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AGGATTTACC-
CTACTAGGATGTNNTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGGATTTACC--
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGGATTTACC---
TGTAGGGATTAATTGTC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGGATTTACC
NGGGATTA---
A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGATTTACC
GGGATTANN-
C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGATTTACC---
AAATGATTTATGGCT
A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T