Information for 23-TGAACCAGTCTT (Motif 40)

A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A G T C A C G T A C T G A C T G A C G T A C G T A G T C C G T A
p-value:1e-3
log p-value:-7.305e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets126.0 +/- 0.0bp
Average Position of motif in Background149.8 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAACCAGTCTT
NAAACCGGTTTT
A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T

PRDM4/MA1647.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGAACCAGTCTT
NAGAAACAGNN--
A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGAACCAGTCTT-
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

GRHL2/MA1105.2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGAACCAGTCTT
NAAACCTGTTTN
A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGAACCAGTCTT
-AAACCGGTTT-
A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T

VDR/MA0693.2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGAACCAGTCTT
TGAACTCA----
A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGAACCAGTCTT
ATGCACCTGTCAT
A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGAACCAGTCTT
BTGACCTAVTTW-
A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TGAACCAGTCTT
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGAACCAGTCTT-
TTGACCTANTTATN
A C G T A C G T A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A