Information for 3-WGGCCTAACTGT (Motif 3)

C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T
Reverse Opposite:
C T G A A G T C C G T A A C T G C G A T A C G T C G T A A C T G A C T G T G A C G A T C G C T A
p-value:1e-5
log p-value:-1.360e+01
Information Content per bp:1.679
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif910.2
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets97.8 +/- 50.3bp
Average Position of motif in Background101.8 +/- 79.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:WGGCCTAACTGT--
----NHAACBGYYV
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

OVOL2/MA1545.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:WGGCCTAACTGT--
-NNNNTAACGGTNN
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T A C G T
A C G T T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

OVOL1/MA1544.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:WGGCCTAACTGT---
-NANATAACGGTTTT
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T A C G T A C G T
A C G T T A G C C T G A T C G A T C G A A C G T C G T A G T C A G T A C A C T G A C T G C G A T G C A T G A C T G C A T

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:WGGCCTAACTGT-
---GCTAAACGGT
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T
A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:WGGCCTAACTGT
----CTAAACGG
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T
A C G T A C G T A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:WGGCCTAACTGT--
----CCAACTGCCA
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:WGGCCTAACTGT
----CTAATKGV
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:WGGCCTAACTGT--
----NTAATKGTTT
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:WGGCCTAACTGT-
-----YAACBGCC
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

PB0149.1_Myb_2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WGGCCTAACTGT-----
-CGACCAACTGCCATGC
C G A T C A T G A C T G A G T C G T A C A C G T C G T A C G T A G T A C C G A T A C T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C