Information for 1-AAGAGTTAGCCA (Motif 3)

C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T C G T A C G T A A G T C A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/MA1657.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AAGAGTTAGCCA
GAAAGAGTTAAA--
A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AAGAGTTAGCCA
NMMNBAAAGGGTTAA---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AAGAGTTAGCCA-
AGGTGNCAGACAG
C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGAGTTAGCCA
TAYAAAAGBWGGCAG
A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGAGTTAGCCA
AGGTGHCAGACA
C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PH0167.1_Tcf1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGTTAGCCA---
NTTTTAGTTAACNNAGN
A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AAGAGTTAGCCA
AAACMATTAN---
A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAGAGTTAGCCA
-TGAGTCAGCA-
C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T

NFE2L2(bZIP)/HepG2-NFE2L2-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AAGAGTTAGCCA---
ATGACTCAGCAWWWT
C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
T C G A C G A T A C T G C T G A A T G C C G A T G A T C C T G A C A T G T G A C C G T A C G T A G C A T G C A T G C A T

PB0081.1_Tcf1_1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGTTAGCCA---
NNNTTAGTTAACTNANN
A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T