Information for 10-GAAAGAGTGG (Motif 14)

A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G
Reverse Opposite:
A G T C A T G C C G T A G T A C A C G T G T A C C G A T A C G T C A G T T G A C
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.700
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif7.76%
Number of Background Sequences with motif1629.2
Percentage of Background Sequences with motif3.42%
Average Position of motif in Targets96.5 +/- 50.1bp
Average Position of motif in Background99.8 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAAAGAGTGG
NAGAGAAAGNA---
A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A A C G T A C G T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGAGTGG
NAGAAACAGNN-
A C G T A C G T A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAAAGAGTGG-
-RAACAATGGN
A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G A C G T
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAAAGAGTGG
VVRRAACAATGG
A C G T A C G T A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAAAGAGTGG
VRAACAATGG
A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

ZNF652/MA1657.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAAGAGTGG--
GAAAGAGTTAAA
A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G A C G T A C G T
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

ZNF24/MA1124.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GAAAGAGTGG
GAATGAATGAATG-
A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAAGAGTGG-
-GAACAATGGN
A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G A C G T
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Prdm15/MA1616.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAAAGAGTGG---
AGGAAAACCTGGAGC
A C G T A C G T A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G A C G T A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GAAAGAGTGG-----
NANTGGAAAAANTGAGTCAN
A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A C G T A C A T G T G C A C A T G C G A T T A C G T C A G A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T