Information for 1-GCTCACATTCAA (Motif 1)

A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
Reverse Opposite:
A C G T A G C T A C T G G T C A C T G A C G A T A T C G A C G T A C T G C G T A A T C G A G T C
p-value:1e-8
log p-value:-1.918e+01
Information Content per bp:1.826
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif31.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets117.3 +/- 18.7bp
Average Position of motif in Background89.5 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCTCACATTCAA
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

NR2C1/MA1535.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTCACATTCAA
CGAGGTCAC------
A C G T A C G T A C G T A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTCACATTCAA
AGGTCA-------
A C G T A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTCACATTCAA-----
GACCACATTCATACAAT
A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTCACATTCAA
--TCAGTCTT--
A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

TEAD4/MA0809.2/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTCACATTCAA--
--CCACATTCCAGG
A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A A C G T A C G T
A C G T A C G T G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCTCACATTCAA
AGRGGTCA-------
A C G T A C G T A C G T A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GCTCACATTCAA
NRBCARRGGTCA-------
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTCACATTCAA
AAGGTCAC------
A C G T A C G T A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTCACATTCAA
GAGGTCAT------
A C G T A C G T A C T G A T G C A C G T A G T C G T C A A T G C C G T A A G C T A C G T A G T C C T G A C G T A
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T