Information for 20-GACAATATGACC (Motif 22)

A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.614e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background144.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GACAATATGACC-
AGGNCANNGTGACCT
A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GACAATATGACC
GACAATGNN---
A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACAATATGACC--
GGTCANNGTGACCTN
A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GACAATATGACC--
AAGGTCACGGTGACCTG
A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GACAATATGACC-
-------TGACCT
A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RARA/MA0729.1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GACAATATGACC--
CATTGACCTTTTGACCTC
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

NR2C1/MA1535.1/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:GACAATATGACC---
------NTGACCTCN
A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACAATATGACC--
TTGACCTTTTGACCTT
A C G T A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GACAATATGACC---
TGACCTTTTGACCTTT
A C G T A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

OLIG3/MA0827.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACAATATGACC
-ACCATATGTT-
A C T G C G T A A G T C C G T A C G T A A C G T C G T A A C G T A C T G C G T A A G T C A G T C
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T