Information for 1-AGCTCAGC (Motif 15)

C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T A T C G C G T A A C T G A G T C C G A T
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.897
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif7.12%
Number of Background Sequences with motif1315.6
Percentage of Background Sequences with motif2.73%
Average Position of motif in Targets85.9 +/- 51.0bp
Average Position of motif in Background98.0 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGCTCAGC---
-DCTCAGCAGG
C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:AGCTCAGC-
----CAGCC
C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGCTCAGC------
HWWGTCAGCAWWTTT
A C G T C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGCTCAGC------
GAGCACAGCAGGACA
A C G T C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCAGC-
TGAGTCAGCA
A C G T C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGCTCAGC-
AAATCACAGCA
A C G T A C G T C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGCTCAGC-----
-NGTCAGCANTTT
C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCTCAGC------
CCACACAGCAGGAGA
A C G T C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGCTCAGC------
CCACACAGCAGGAGA
A C G T C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGCTCAGC------
--CHCAGCRGGRGG
C G T A C T A G A G T C A C G T A T G C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G