Information for 9-GTTCATGTTGCT (Motif 10)

A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C G T A C T G C G T A C G T A A G T C
p-value:1e-4
log p-value:-1.075e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets176.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTTCATGTTGCT
GKVTCADRTTWC-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

SIX1/MA1118.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTCATGTTGCT
TATCAGGTTAC-
A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

IKZF1/MA1508.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATGTTGCT
NCTTCCTGTTNN-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T
T C G A A G T C G C A T A G C T A G T C G A T C G C A T A T C G A G C T A C G T A G C T A G T C A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GTTCATGTTGCT--
ACTYKNATTCGTGNTACTTC
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATGTTGCT
GKMTCADRTTWC-
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

RFX7/MA1554.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GTTCATGTTGCT--
-----CGTTGCTAT
A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTTCATGTTGCT----
----CTGTTGCTAGGS
A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

NR1I3/MA1534.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTCATGTTGCT
AAAGTTCAT------
A C G T A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

SIX2/MA1119.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATGTTGCT---
GTATCAGGTTTCAGNN
A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTCATGTTGCT--
AANTTCAAGTGGCTTN
A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C T G A G T C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A