Information for 4-CAGGGATDAACH (Motif 5)

A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A
Reverse Opposite:
C A G T A C T G C G A T A G C T G A T C C G T A C G A T A G T C G T A C A T G C C A G T A C T G
p-value:1e-4
log p-value:-1.075e+01
Information Content per bp:1.738
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif516.2
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets80.0 +/- 23.1bp
Average Position of motif in Background96.2 +/- 92.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DPRX/MA1480.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CAGGGATDAACH
--NGGATTATCT
A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A
A C G T A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGGGATDAACH--
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CAGGGATDAACH--
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGATDAACH---
NNAAGGGATTAACGANT
A C G T A C G T A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAGGGATDAACH--
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGATDAACH---
NANAGGGATTAATTATN
A C G T A C G T A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGGGATDAACH
-VRGGATTARN-
A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGGGATDAACH---
TAGAGGGATTAAATTTC
A C G T A C G T A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAGGGATDAACH
--GGGATTANN-
A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAGGGATDAACH---
TGTAGGGATTAATTGTC
A C G T A C G T A G T C G T C A A T C G A C T G A C T G C G T A A C G T C A T G C T G A C G T A A G T C G C T A A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C