Information for 4-AGTAGGGCGA (Motif 26)

C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C A G T C A G T C A C G T C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.709e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.0 +/- 0.0bp
Average Position of motif in Background47.8 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGTAGGGCGA
ATAGTAGGTG--
A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------AGTAGGGCGA
GCACAYAGTAGGKCY-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTAGGGCGA-
-GGAGGGGGAA
C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGTAGGGCGA------
NNNTNGGGCGTATNNTN
A C G T C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

ZNF135/MA1587.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGTAGGGCGA--
TCAGGAGGTCGAGG
A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A A C G T A C G T
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

SREBF1/MA0595.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTAGGGCGA-
-GTGGGGTGAT
C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

RORC/MA1151.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGTAGGGCGA
ATAAGTAGGTCA-
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGTAGGGCGA---
-GTGGCGTGACNG
C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGTAGGGCGA-
-ATGGGGTGAT
C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGTAGGGCGA
CACAGCAGGGG--
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C T G A C T G A G T C A C T G C G T A
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T