Information for 1-CTCTTACCCACA (Motif 1)

A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A
Reverse Opposite:
A C G T T A C G A C G T C A T G C T A G A T C G A G C T G T C A C G T A C T A G C G T A A C T G
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.746
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif271.7
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets33.0 +/- 10.8bp
Average Position of motif in Background103.2 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTTACCCACA-
NTGACCTTTGACCTANAT
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T
T G C A G A C T T C A G T G C A G T A C A G T C A G C T G A C T G A C T T C A G T G C A G A T C G T A C A G C T T G C A A G T C C G T A C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CTCTTACCCACA---
----AAACCACAGAN
A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCTTACCCACA---
---NWAACCACADNN
A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZNF75D/MA1601.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCTTACCCACA-
---TTTCCCACAN
A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T
A C G T A C G T A C G T G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTCTTACCCACA--
----AAACCACAGC
A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCTTACCCACA
TGACCTTTGCCCCA--
A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTCTTACCCACA-
-SCCTAGCAACAG
A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CTCTTACCCACA
TGACCTTTGCCCTAN-
A C G T A C G T A C G T A C G T A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCTTACCCACA--
----AAACCACANN
A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTCTTACCCACA-
---NAAACCACAG
A G T C C G A T A G T C C G A T A C G T C T G A A T G C A G T C G T A C C G T A A T G C C G T A A C G T
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G