Information for 2-TGAAAACTGTGA (Motif 2)

A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A
Reverse Opposite:
A G C T G T A C C G T A A G T C C G T A A C T G A C G T A C G T A C G T A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.194e+01
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif181.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets88.0 +/- 31.2bp
Average Position of motif in Background97.9 +/- 129.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX2/MA1119.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TGAAAACTGTGA-
AACTGAAACCTGATAC
A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAAAACTGTGA
TGACACCTGTCA
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

TGIF1/MA0796.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGAAAACTGTGA
TGACAGCTGTCA
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGAAAACTGTGA
TGACAGCTGTCA
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A

TGIF2LX/MA1571.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGAAAACTGTGA
TGACAGCTGTCA
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A
G A C T T A C G C G T A G A T C C T G A A T C G T A G C G A C T T C A G G C A T A T G C C T G A

TGIF2LY/MA1572.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGAAAACTGTGA
TGACAGCTGTCA
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A
G A C T T A C G C G T A G A T C C T G A A T C G T A G C G A C T C T A G G C A T A T G C C T G A

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGAAAACTGTGA-----
NANTGGAAAAANTGAGTCAN
A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAAAACTGTGA----
TTGAAAACCGTTAATTT
A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAAAACTGTGA---
TGWAAYCTGABACCB
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A A C G T A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

SIX1/MA1118.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAAAACTGTGA
-GTAACCTGATA
A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A C T G C G A T A C T G C T G A
A C G T C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A