Information for 17-ATTTGAAATAGG (Motif 22)

C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C G T
p-value:1e-3
log p-value:-8.062e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif130.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets80.0 +/- 42.0bp
Average Position of motif in Background103.0 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATTTGAAATAGG
-TTTGAAACCG-
C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATTTGAAATAGG
ATTTGAATT---
C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTTGAAATAGG
AAATAAGAAAAAAC
A C G T A C G T C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATTTGAAATAGG
-CCAAAAATAG-
C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGAAATAGG
CCTTTGATGT---
A C G T C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGAAATAGG-
NNNTTTNTAATACNG
A C G T A C G T C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PRDM4/MA1647.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTTGAAATAGG-
--NAGAAACAGNN
C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G A C G T
A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTTGAAATAGG
DCYAAAAATAGM
C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATTTGAAATAGG
CCTTTGATST---
A C G T C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGAAATAGG
CCTTTGAWGT---
A C G T C G T A A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A C T G A C T G
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T