Information for 5-MTRAGCTATGTG (Motif 5)

G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A C G T C G T A A C T G A G T C A C G T A G T C C G T A A C G T
p-value:1e-13
log p-value:-3.052e+01
Information Content per bp:1.920
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.9 +/- 46.4bp
Average Position of motif in Background124.8 +/- 45.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0161.1_Rxra_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---MTRAGCTATGTG-
NNNNCAACCTTCGNGA
A C G T A C G T A C G T G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

MXI1/MA1108.2/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:MTRAGCTATGTG--
----NNCATGTGNN
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C

PBX2/MA1113.2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-MTRAGCTATGTG
NNTGATTTATGNN
A C G T G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

NR1I3/MA1534.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:MTRAGCTATGTG
ATGAACTTT---
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:MTRAGCTATGTG-
---GGGTACGTGC
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T
A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:MTRAGCTATGTG--
---NNCTTTGTTNN
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:MTRAGCTATGTG
-TGACCTARTT-
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:MTRAGCTATGTG
-TGACCTARTT-
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

USF1/MA0093.3/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:MTRAGCTATGTG----
--TGGTCATGTGACCT
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:MTRAGCTATGTG
CTGACCTTTG--
G T C A A C G T C T A G C G T A A C T G A G T C A C G T C G T A A C G T C T A G A C G T A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T