Information for 9-ATTAGACTAC (Motif 28)

C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C G T A G T C A C G T C G T A C G T A A C G T
p-value:1e-3
log p-value:-7.170e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background52.6 +/- 42.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTAGACTAC
-BCAGACWA-
C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATTAGACTAC--
TAAGATTATAATACGG
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTAGACTAC
GCAATTAG-----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATTAGACTAC
ACTAATTAGC----
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T

PROP1/MA0715.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGACTAC
TAATTAAATTA-
A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATTAGACTAC------
TACGAGACTCCTCTAAC
A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PDX1/MA0132.2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTAGACTAC
GTAATTAG-----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTAGACTAC
TAATTAAATTA-
A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T

HOXD3/MA0912.2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ATTAGACTAC
GTAATTAG-----
A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G A C G T A C G T A C G T A C G T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATTAGACTAC
NNAGATTAGAN---
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A G T C
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A A C G T A C G T A C G T