Homer de novo Motif Results (motif_results/SRR15725996//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 900
Total background sequences = 48650
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A C G T C T G A A C G T A C T G 1e-16-3.892e+011.11%0.01%45.9bp (38.5bp)OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.660)
More Information | Similar Motifs Found
motif file (matrix)
2 A C T G C G T A A G T C C G A T A T C G A C G T A C G T A C G T A C T G A G T C A C G T A G T C 1e-15-3.623e+011.00%0.01%39.7bp (40.7bp)Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer(0.679)
More Information | Similar Motifs Found
motif file (matrix)
3 A C T G A G C T C G T A C G T A A C G T C G A T A G T C C G T A A C G T A C T G A C G T A G T C 1e-13-3.125e+011.00%0.02%43.4bp (43.3bp)PH0083.1_Irx3_1/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G C G A T A G C T A C T G A G T C C G T A A G T C A C G T C T G A C A G T 1e-12-2.988e+012.11%0.20%59.5bp (59.2bp)ATF4/MA0833.2/Jaspar(0.645)
More Information | Similar Motifs Found
motif file (matrix)
5 * A G C T A T G C G A C T T G C A A G T C C G T A C T G A A G T C A G T C A G T C G T A C G T A C 1e-11-2.700e+012.67%0.41%48.6bp (56.0bp)PB0097.1_Zfp281_1/Jaspar(0.638)
More Information | Similar Motifs Found
motif file (matrix)
6 * A C G T A C T G A G T C C G T A A C G T A G T C C G T A A C G T A G C T A G T C C G T A A G T C 1e-11-2.634e+010.67%0.00%62.1bp (73.9bp)Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer(0.783)
More Information | Similar Motifs Found
motif file (matrix)
7 * A G T C A G T C A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C T G A C T G A G T C 1e-10-2.470e+010.56%0.00%27.3bp (0.0bp)EBF1/MA0154.4/Jaspar(0.695)
More Information | Similar Motifs Found
motif file (matrix)
8 * C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C G T 1e-10-2.470e+010.56%0.00%38.4bp (0.0bp)ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer(0.757)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T A C T G G C T A A C G T A C T G A C T G C A T G A G T C A G T C A G T C 1e-10-2.421e+011.67%0.16%51.6bp (54.9bp)PLAGL2/MA1548.1/Jaspar(0.732)
More Information | Similar Motifs Found
motif file (matrix)
10 * C G A T A G C T T C G A T A G C C G T A C T G A A G T C C G T A T C A G C A G T A C T G A C G T 1e-10-2.346e+010.89%0.02%40.6bp (78.9bp)PB0062.1_Sox12_1/Jaspar(0.652)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C T G A C G T G T A C A C G T A C T G A G C T A C G T A C T G A G T C C G A T C G T A A C G T 1e-9-2.289e+010.78%0.02%44.6bp (64.7bp)RFX1/MA0509.2/Jaspar(0.730)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G C T T G C A G T A C A G T C G T A C G T A C C G A T A C T G A G T C G T C A 1e-9-2.283e+014.44%1.34%60.2bp (57.8bp)PB0091.1_Zbtb3_1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
13 * C G T A A C G T C A T G A C G T A C G T A C G T G A C T A G T C A C T G G A T C 1e-9-2.280e+011.22%0.07%52.1bp (51.8bp)FOXA1/MA0148.4/Jaspar(0.701)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C G T C A A C G T A G T C C G T A A G T C C G T A A T C G A G T C G T C A A C G T G T A C 1e-9-2.130e+011.67%0.19%44.0bp (63.2bp)Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer(0.758)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T C G T A A C T G A G T C C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C G T 1e-9-2.125e+010.56%0.00%12.8bp (0.0bp)PB0170.1_Sox17_2/Jaspar(0.649)
More Information | Similar Motifs Found
motif file (matrix)
16 * A C T G A C G T A C G T A G T C A G T C A C G T A C G T A G T C A G T C C G T A A C G T A T G C 1e-9-2.125e+010.56%0.01%34.7bp (9.7bp)EWSR1-FLI1/MA0149.1/Jaspar(0.635)
More Information | Similar Motifs Found
motif file (matrix)
17 * G A C T C G T A C G A T C A G T A C T G G T C A G A C T A T G C G C A T C G A T C T G A C T G A 1e-9-2.089e+010.67%0.01%29.8bp (31.2bp)ESRRB/MA0141.3/Jaspar(0.707)
More Information | Similar Motifs Found
motif file (matrix)
18 * G T C A G C T A G T A C C G A T C T A G T G A C G A T C G A C T A G T C G A T C G T A C G A T C 1e-8-1.924e+010.56%0.01%61.1bp (22.2bp)ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer(0.652)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A C G T A C T G C A T G A C T G C T G A C G A T A T G C G T C A G T A C C G T A A G T C 1e-7-1.782e+010.56%0.01%46.7bp (4.5bp)PH0162.1_Six2/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G 1e-7-1.779e+015.56%2.29%52.0bp (60.6bp)HNF4A/MA0114.4/Jaspar(0.626)
More Information | Similar Motifs Found
motif file (matrix)
21 * T A C G A G T C C G T A A C T G A C G T C T G A A C T G C G T A A T C G A G T C 1e-7-1.726e+011.33%0.16%57.3bp (57.1bp)OSR1/MA1542.1/Jaspar(0.651)
More Information | Similar Motifs Found
motif file (matrix)
22 * A T G C A G T C A G T C A C G T A C T G A C T G A C T G A C T G A G T C C G A T C G T A C G T A 1e-7-1.672e+010.56%0.01%54.1bp (43.8bp)PB0088.1_Tcfap2e_1/Jaspar(0.705)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G C G T A A C G T C G T A A C T G A C T G C G T A A C T G A G T C G T C A 1e-7-1.654e+010.89%0.06%55.8bp (61.5bp)POL013.1_MED-1/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G T C C G T A A G C T A G T C G T C A G T A C G A T C A C G T T C G A A G T C G A T C G A C T 1e-7-1.652e+011.56%0.24%45.0bp (61.2bp)ZKSCAN5/MA1652.1/Jaspar(0.665)
More Information | Similar Motifs Found
motif file (matrix)
25 * G T C A C A G T G A C T A T G C G C A T T A G C T G A C C T G A C T A G G T A C 1e-6-1.540e+019.33%5.16%52.6bp (57.4bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.672)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C G T C T A G C G T A C G A T G T C A A G T C A C G T C T A G G A T C C G A T 1e-6-1.529e+012.33%0.60%46.8bp (53.8bp)PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer(0.634)
More Information | Similar Motifs Found
motif file (matrix)
27 * A G T C G T C A G T A C C G T A A T G C G C T A A G C T A G T C C G T A G T A C 1e-6-1.417e+013.56%1.31%57.5bp (64.5bp)PH0134.1_Pbx1/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
28 * G C T A T C G A C G T A C T A G T C G A T G A C C G T A T A C G G C T A A T C G 1e-5-1.308e+016.56%3.40%53.7bp (60.1bp)PRDM4/MA1647.1/Jaspar(0.712)
More Information | Similar Motifs Found
motif file (matrix)
29 * G T A C G T A C C G T A A C T G C G T A A C T G C G T A G A C T C G A T A C T G 1e-5-1.229e+012.44%0.79%53.0bp (58.0bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.702)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A G T C A G T C C G T A A C T G A C T G A G T C A G T C A G T C A C T G 1e-5-1.168e+010.33%0.00%17.0bp (35.6bp)ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer(0.708)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A C G T A C G T A A C G T A G T C A G T C C G T A A G T C A C T G C G T A 1e-5-1.168e+010.33%0.00%24.1bp (27.0bp)Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer(0.753)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C A G T C A C G T A C T G A G T C A G T C C G A T C G T A A C G T A C T G 1e-3-8.243e+000.44%0.03%38.3bp (50.4bp)SD0002.1_at_AC_acceptor/Jaspar(0.625)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C G T A C G T C A G T C T A G A C T G A C T G A C G T A C G T 1e-3-7.466e+007.00%4.54%56.2bp (56.3bp)RUNX3/MA0684.2/Jaspar(0.691)
More Information | Similar Motifs Found
motif file (matrix)
34 * A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C T G A G T C C G T A 1e-2-5.927e+000.22%0.01%53.7bp (48.8bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.676)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G C G T A C G T A A C G T C G A T C G T A A C G T A G T C 1e-2-5.900e+001.89%0.87%58.0bp (57.8bp)MEIS2(var.2)/MA1640.1/Jaspar(0.747)
More Information | Similar Motifs Found
motif file (matrix)
36 * C G A T T C G A A C G T T C A G G C A T C T A G C A G T T C A G C A G T T C A G C G A T C T A G 1e-2-5.707e+007.11%4.99%55.4bp (71.4bp)MF0005.1_Forkhead_class/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
37 * A G T C C G T A A C T G C T A G A G T C C G T A A G T C C G T A G T A C C G T A A C G T A C T G 1e-2-5.465e+000.33%0.04%55.4bp (68.4bp)PB0208.1_Zscan4_2/Jaspar(0.710)
More Information | Similar Motifs Found
motif file (matrix)