Information for 20-GAGTCTATAAAC (Motif 22)

A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.045e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAGTCTATAAAC---
---WWTRTAAACAVG
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGTCTATAAAC--
--WWATRTAAACAN
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GAGTCTATAAAC----
-----AATAAACAATN
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGTCTATAAAC-------
----GTATAAAAGGCGGGG
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAGTCTATAAAC-------
----GTATAAAAGGCGGGG
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Foxl2/MA1607.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAGTCTATAAAC---
-AATATGTAAACAAA
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A

Foxf1/MA1606.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAGTCTATAAAC---
----ATGTAAACAAA
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAGTCTATAAAC--
--NGYCATAAAWCH
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGTCTATAAAC
--KGCCATAAAA
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C
A C G T A C G T C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GAGTCTATAAAC-
------GTAAACA
A C T G C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A