Information for 13-GACACACAGAAC (Motif 17)

T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C
Reverse Opposite:
A T C G A C G T A C G T A G T C C G A T T A C G A C G T C T A G A C G T C A T G A C G T A T G C
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.781
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.3 +/- 36.4bp
Average Position of motif in Background149.5 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN4/MA1155.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACACACAGAAC-
TGCACACACTGAAAA
A C G T A C G T T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACACACAGAAC---
TGACCCAGTGACCTAC
A C G T T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

NR1D1/MA1531.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACACACAGAAC-
NTGACCTACTGACCC
A C G T A C G T T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GACACACAGAAC-
AAACAGACAAAGGAAT
A C G T A C G T A C G T T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

NR1D2/MA1532.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACACACAGAAC-
NTGACCCACTAACCC
A C G T A C G T T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

Stat2/MA1623.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACACACAGAAC--
-AGAAACAGAAACT
T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T A C G T
A C G T C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACACACAGAAC
AAAACAAAGAA-
T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GACACACAGAAC---
WNAGTCADAVTGAAACTN
A C G T A C G T A C G T T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GACACACAGAAC---
---ACAAAGGNBCCT
T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GACACACAGAAC
AGCGGCACACACGCAA-
A C G T A C G T A C G T A C G T A C G T T A C G C G T A G A T C C G T A A G T C C G T A A T G C C G T A C T A G G T C A G T C A A T G C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T