Information for 25-AAGTGACTTGTA (Motif 33)

C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C G T A C G T A A C T G A C G T A G T C C G T A A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.027e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background21.7 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AAGTGACTTGTA
--TTGACTTTT-
C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGTGACTTGTA
NCGTGACN----
C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAGTGACTTGTA-------
----GACTTTTAWTTTGAA
C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAGTGACTTGTA--
--GGGAATTGTAGT
C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A A C G T A C G T
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGACTTGTA
AANTTCAAGTGGCTTN--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAGTGACTTGTA-----
AATATACATGTAATATA
C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGACTTGTA----
ANTNTTACATGTATNTA
A C G T C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

PH0115.1_Nkx2-6/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGACTTGTA
AATNTTAAGTGGNTNN--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGTGACTTGTA-
AGAAATGACTTCCCT
A C G T A C G T C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AAGTGACTTGTA
AATTTCAAGTGGCTTN--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C G T C G T A
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T