Information for 1-TGATTGAG (Motif 21)

C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G
Reverse Opposite:
G T A C G A C T G A T C T G C A G T C A G C A T G T A C C G T A
p-value:1e-6
log p-value:-1.510e+01
Information Content per bp:1.791
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif8.34%
Number of Background Sequences with motif2189.6
Percentage of Background Sequences with motif4.56%
Average Position of motif in Targets106.7 +/- 62.1bp
Average Position of motif in Background100.4 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGAG
TTGATTGN-
A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TGATTGAG--
TTTGATTGATGN
A C G T A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TGATTGAG----
NNANTGATTGATNTTN
A C G T A C G T A C G T A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:4
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----TGATTGAG----
NNANTGATTGATNNNN
A C G T A C G T A C G T A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:TGATTGAG--
TGATKGATGR
C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:6
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TGATTGAG---
NNTGATTGATGNN
A C G T A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGATTGAG---
ATGATKGATGRC
A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TGATTGAG---
RTGATTKATRGN
A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T A C G T
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.78
Offset:-6
Orientation:reverse strand
Alignment:------TGATTGAG---
NNNNGTTGATTGGGTCG
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:TGATTGAG--
TGATTGATGA
C G A T C A T G C G T A C A G T A C G T C T A G C T G A C A T G A C G T A C G T
C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A