Information for 3-AAAGCTADTHAC (Motif 3)

C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C
Reverse Opposite:
A C T G A C G T C A T G C T G A G C T A A G C T C G T A A T C G A T G C C A G T C G A T C G A T
p-value:1e-6
log p-value:-1.522e+01
Information Content per bp:1.728
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif584.1
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets121.0 +/- 46.8bp
Average Position of motif in Background96.6 +/- 77.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0094.1_Lhx4/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCTADTHAC----
CAAAGCTAATTAGNTTN
A C G T C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T A C G T A C G T A C G T
G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0053.1_Hoxa6/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAAGCTADTHAC-----
-AAGGTAATTACCTAAT
C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

HOXD3/MA0912.2/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AAAGCTADTHAC
----CTAATTAC
C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C

HOXB7/MA1501.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAAGCTADTHAC-
---GNTAATTACC
C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T
A C G T A C G T A C G T A T C G A G C T A G C T C G T A G T C A A C G T A C G T T C G A G T A C A G T C

PH0061.1_Hoxb6/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTADTHAC---
TATTGGTAATTACCTT
A C G T C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTADTHAC---
CTGAGCTAATTACCGT
A C G T C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

PH0024.1_Dlx5/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCTADTHAC---
NANNGNTAATTACCNN
A C G T C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAGCTADTHAC
--NDGTAATTAC
C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C
A C G T A C G T T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C

PH0006.1_Barhl2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGCTADTHAC--
AAAAACCAATTAAGAA
A C G T A C G T C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0072.1_Hoxc8/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAGCTADTHAC-----
-ACNNTAATTACNNCAN
C G T A C G T A G T C A T A C G A T G C C G A T C T G A C G A T A G C T G A T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A