Information for 10-CTATGAATCTTC (Motif 13)

A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A G T C A A C T G C G T A A C G T A C G T A G T C C G T A A C G T C G T A A C T G
p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.966
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets172.2 +/- 12.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTATGAATCTTC
--ATGAATATTC
A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTATGAATCTTC
--ATGMATATDC
A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTATGAATCTTC
NNTNTCATGAATGT--
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTATGAATCTTC
NCYATMAATCAY-
A C G T A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T A C G T

NFE2/MA0841.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTATGAATCTTC
-CATGACTCATC
A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTATGAATCTTC--
CTCATGAATATTCAT
A C G T A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

JDP2/MA0655.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTATGAATCTTC
--ATGAGTCAT-
A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T

FOSL2::JUNB/MA1138.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTATGAATCTTC
--ATGAGTCATC
A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
A C G T A C G T T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T T G A C

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTATGAATCTTC-
NNCCATAAATCATNN
A C G T A C G T A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

FOSL2::JUND/MA1144.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTATGAATCTTC
--ATGAGTCATC
A G T C A C G T C G T A A C G T A C T G C G T A C G T A A C G T A G T C A C G T A C G T A G T C
A C G T A C G T T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T T G A C