Information for 18-CCATGCAAGCAG (Motif 22)

A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G C T A C G T A C T G A G T C C G T A A C G T C T A G A C T G
p-value:1e-6
log p-value:-1.470e+01
Information Content per bp:1.962
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.4 +/- 62.0bp
Average Position of motif in Background103.4 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)2.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCATGCAAGCAG
-AAGGCAAGTGT
A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCATGCAAGCAG-
TCCCAGMCRAGCCCC
A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCATGCAAGCAG---
SCAGYCADGCATGAC
A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCATGCAAGCAG
--TBGCACGCAA
A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCATGCAAGCAG
ATATGCAAATT-
A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCATGCAAGCAG-
NNNVCTGWGYAAACASN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCATGCAAGCAG
----GTAAACAG
A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCATGCAAGCAG
----CCAATCAA
A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CCATGCAAGCAG
TTGCCATGGCAACC-
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCATGCAAGCAG
-----CACGCA-
A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T