Information for 6-CACAGAAAAAAT (Motif 6)

A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T A C G T A C G T A C G T A C G T A T G C A G C T A T C G A G C T C T A G
p-value:1e-6
log p-value:-1.385e+01
Information Content per bp:1.781
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif266.4
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets62.0 +/- 35.3bp
Average Position of motif in Background105.5 +/- 72.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACAGAAAAAAT-
TACTGGAAAAAAAA
A C G T A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

ZNF384/MA1125.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CACAGAAAAAAT-
-TTTAAAAAAAAA
A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T
A C G T C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CACAGAAAAAAT----
--AAGATAAGATAACA
A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

GATA6/MA1104.2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACAGAAAAAAT--
-NNAGATAAGATAN
A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CACAGAAAAAAT-
AAACAGACAAAGGAAT
A C G T A C G T A C G T A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CACAGAAAAAAT-
---AGATAAGANN
A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CACAGAAAAAAT----
GTTAAAAAAAAAAATTA
A C G T A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACAGAAAAAAT-
AGCCGAAAAAAAAAT
A C G T A C G T A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CACAGAAAAAAT
-----NANANAC
A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CACAGAAAAAAT
--NACAGGAAAT
A G T C C T G A A T G C C T G A A T C G C G T A G T C A G T C A C G T A C T G A C G T A A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T