Information for 21-CAAAGCATTATG (Motif 29)

A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.807e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background121.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CAAAGCATTATG
-AAACMATTAN-
A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CAAAGCATTATG----
CAATGCATTGTGGGTA
A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

BARX2/MA1471.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCATTATG
AAAAACCATTAC-
A C G T A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G
C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAAAGCATTATG-----
--ATGCATWATGCATRW
A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGCATTATG
AAACAGACAAAGGAAT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCATTATG
AAAACAAAGAA-----
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAAGCATTATG-
AAAAACCATTAAGG
A C G T A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

TCF7/MA0769.2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGCATTATG
ANATCAAAGNN-----
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAAAGCATTATG-
-AAGGGATTAGAA
A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G A C G T
A C G T G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAAGCATTATG
--NGGGATTA--
A G T C C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T C G T A A C G T A C T G
A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T