Information for 19-CCCTGCAGCCCT (Motif 37)

A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background84.0 +/- 34.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCTGCAGCCCT
NNCCTGCTGNG--
A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTGCAGCCCT
GTCCTTGAGCCCG
A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCCTGCAGCCCT
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCAGCCCT
ATTTCCCAGVAKSCY-
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCTGCAGCCCT
-GCTGTTACCCT
A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCAGCCCT
GGCCYCCTGCTGDGH-
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

Zic2/MA1629.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCAGCCCT
CCCCCTGCTGTGNN
A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

KLF17/MA1514.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCTGCAGCCCT-
CACCACGCACCCCTT
A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T A C G T
G T A C G T C A T G A C T G A C G C T A G A T C T C A G G T A C C G T A T A G C T A G C G A T C T G A C G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCAGCCCT
CCCCCTGCTGTG--
A C G T A C G T A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCCTGCAGCCCT
-----CAGCC--
A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T