Information for 11-SCCGSGGG (Motif 35)

A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G
Reverse Opposite:
G T A C A G T C A G T C A T G C A T G C A T C G A C T G A T C G
p-value:1e-2
log p-value:-4.963e+00
Information Content per bp:1.809
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif187.2
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets77.2 +/- 40.1bp
Average Position of motif in Background96.4 +/- 50.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0102.1_Zic2_1/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----SCCGSGGG--
ACCCCCCCGGGGGGN
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----SCCGSGGG--
NCCCCCCCGGGGGGN
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----SCCGSGGG--
CACCCCCGGGGGGG
A C G T A C G T A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--SCCGSGGG--
TGCCCNGGGGCA
A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

TFAP2E/MA1569.1/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-SCCGSGGG--
NGCCTGAGGCN
A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T
G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---SCCGSGGG------
ANTNCCGGGGGGAANTT
A C G T A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---SCCGSGGG----
ATTCCCTGAGGGGAA
A C G T A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

TFAP2B/MA0811.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--SCCGSGGG--
TGCCCTNGGGCA
A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--SCCGSGGG--
TGCCCTNGGGCA
A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T A C G T
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---SCCGSGGG-
GTCCCCAGGGGA
A C G T A C G T A C G T A T G C A G T C A T G C A T C G A T C G A C T G A C T G A C T G A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A