Information for 9-CTCGACAGAC (Motif 30)

A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C T G A C G T A G T C A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.279e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets16.0 +/- 0.0bp
Average Position of motif in Background134.8 +/- 90.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CTCGACAGAC----
----CCAGACRSVB
A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTCGACAGAC--
----CCAGACAG
A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTCGACAGAC
ATTCTCGCGAGA-
A C G T A C G T A C G T A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCGACAGAC
-TTGACAGC-
A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTCGACAGAC
TCTAGACA---
A C G T A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCGACAGAC
-TTGACAGG-
A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CTCGACAGAC--
----BCAGACWA
A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

SMAD5/MA1557.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTCGACAGAC
TGTCTAGACA---
A C G T A C G T A C G T A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCGACAGAC
-TTGACAG--
A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCGACAGAC-
GGNTCTCGCGAGAAC
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C A C G T
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C