Information for 6-CTAGTGATTTGA (Motif 12)

A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A C G T A A C G T A G T C C G T A A G T C A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTAGTGATTTGA-
NNTTTATTGATTTTTT
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

GFI1/MA0038.2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGATTTGA
TGCAGTGATTTN-
A C G T A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A
C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTAGTGATTTGA--
NNNTATTGAATTGNNN
A C G T A C G T A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGATTTGA-
NTTATTGATTTTTT
A C G T A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTAGTGATTTGA
--ATTGATTYND
A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

NFYC/MA1644.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTAGTGATTTGA-
--NCTGATTGGNN
A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTAGTGATTTGA---
---GWAAYHTGABMC
A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PHOX2B/MA0681.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTAGTGATTTGA-----
-NNATAATTTGATTANN
A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGATTTGA-
ATTATCGATTTTTT
A C G T A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGATTTGA
TGCTGTGATTT--
A C G T A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C T G C G T A
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T