Information for 2-GGTCAGTAAA (Motif 7)

C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
Reverse Opposite:
C A G T A C G T C G A T C G T A G A T C C G A T T C A G G C T A G T A C A G T C
p-value:1e-14
log p-value:-3.299e+01
Information Content per bp:1.690
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.14%
Number of Background Sequences with motif651.4
Percentage of Background Sequences with motif1.36%
Average Position of motif in Targets90.0 +/- 60.7bp
Average Position of motif in Background98.2 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGTAAA
NAGGTCATTGA-
A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGTAAA
AGGTCA-----
A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTAAA
CGAGGTCAC----
A C G T A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAGTAAA
NRBCARRGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTAAA
AGRGGTCA-----
A C G T A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTAAA
TRAGGTCA-----
A C G T A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGTAAA
GAGGTCAT----
A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGTAAA
CAGGTAAGTAT-
A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------GGTCAGTAAA
GKBCARAGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGTAAA---
GGAGGTCATTAATTAT
A C G T A C G T A C G T C T A G C A T G C G A T A G T C C G T A C T A G G C A T G C T A T G C A G T C A A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T