Information for 12-TGCCAGACCTTT (Motif 18)

A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C T G A C T G A G T C C G T A
p-value:1e-3
log p-value:-8.771e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGCCAGACCTTT
ATGCCAGACN---
A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGCCAGACCTTT
AGGTGHCAGACA---
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGCCAGACCTTT--
--NNTGACCTTTNN
A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGCCAGACCTTT----
----TGACCTTTNCNT
A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGCCAGACCTTT----
NNNNTGACCTTTNNNN
A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F2/MA1111.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGCCAGACCTTT-
--NNTGACCTTTN
A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCAGACCTTT----
NNNGTGACCTTTGNNN
A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCCAGACCTTT--
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCCAGACCTTT
AGGTGNCAGACAG--
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGCCAGACCTTT-
---CTGACCTTTG
A C G T A C T G A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G