| p-value: | 1e-6 |
| log p-value: | -1.402e+01 |
| Information Content per bp: | 1.819 |
| Number of Target Sequences with motif | 30.0 |
| Percentage of Target Sequences with motif | 4.00% |
| Number of Background Sequences with motif | 679.7 |
| Percentage of Background Sequences with motif | 1.43% |
| Average Position of motif in Targets | 102.5 +/- 52.0bp |
| Average Position of motif in Background | 98.4 +/- 61.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.03 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACACCAT CCAGACRSVB- |
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|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CAGACACCAT- CAAATCCAGACATCACA |
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|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACACCAT CCAGACAG--- |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACACCAT BCAGACWA--- |
|
|
|
Smad4/MA1153.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CAGACACCAT TCTAGACA---- |
|
|
|
PH0164.1_Six4/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CAGACACCAT--- ATAAATGACACCTATCA |
|
|
|
PB0117.1_Eomes_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAGACACCAT--- NNGGCGACACCTCNNN |
|
|
|
TBX3/MA1566.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAGACACCAT NTCACACCTN |
|
|
|
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CAGACACCAT -TGACACCT- |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CAGACACCAT AGGTGHCAGACA---- |
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|
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