Information for 7-AGACCAATCACC (Motif 11)

C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G G C T A A C G T A C G T A C T G A C T G A C G T A G T C A C G T
p-value:1e-8
log p-value:-1.842e+01
Information Content per bp:1.927
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.2 +/- 53.1bp
Average Position of motif in Background52.1 +/- 55.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGACCAATCACC
-AACCAATCAGA
C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C
A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGACCAATCACC
-AGCCAATCAGA
C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C
A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGACCAATCACC
AGACCACCCASR
C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

GLI3/MA1491.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGACCAATCACC---
AGACCACCCACGTCG
C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C A C G T A C G T A C G T
T G C A A C T G T G C A T G A C T G A C G T C A T A G C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

GLI2/MA0734.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGACCAATCACC---
AGACCACCCACGTCG
C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C A C G T A C G T A C G T
T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGACCAATCACC
ACTAGCCAATCA--
A C G T A C G T C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGACCAATCACC
GGACCACCCACG
C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGACCAATCACC--
GAAGATCAATCACTTA
A C G T A C G T C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGACCAATCACC
-AGCCAATCGG-
C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGACCAATCACC--
GAAGATCAATCACTAA
A C G T A C G T C G T A A C T G C G T A A G T C A G T C C G T A G T C A C G A T A G T C G T C A A G T C A G T C A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A