Information for 13-GTTAAGTATC (Motif 28)

A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A G T C A C G T A C G T C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.028e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif29.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background109.5 +/- 81.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GTTAAGTATC---
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

TEF/MA0843.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTTAAGTATC-
NGTTACGTAATN
A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T
A C G T T C A G G A C T C G A T T C G A A G T C C T A G A G C T G C T A C G T A A G C T T C G A

PB0031.1_Hoxa3_1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTAAGTATC----
GTTAATTANCTCNN
A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A

PH0060.1_Hoxb5/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTTAAGTATC----
ACGGTAATTAGCTCAT
A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0174.1_Vax1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTTAAGTATC----
ACGTTAATTAACCCAG
A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G

PH0020.1_Dlx1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTTAAGTATC----
ATTAATTANCTCAN
A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G

mix-a/MA0621.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTAAGTATC
AATTAATTAGT
A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C
C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTTAAGTATC----
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0036.1_Gsx2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTTAAGTATC----
AGGTTAATTAGCTGAT
A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

LMX1A/MA0702.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTTAAGTATC
-TTAATTAA-
A C T G A C G T A C G T C G T A C G T A A C T G A C G T C G T A A C G T A G T C
A C G T A G C T A G C T C G T A G T C A A G C T A C G T T C G A T G C A A C G T