Information for 1-AGAGTGTAGTAT (Motif 1)

C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A G T C A C G T C T G A A G T C C G T A A G T C A C G T A G T C A C G T
p-value:1e-7
log p-value:-1.835e+01
Information Content per bp:1.936
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets118.0 +/- 43.0bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGTAGTAT
GTGAGTGNAC---
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAGTGTAGTAT
TTRAGTGSYK---
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

ZBTB32/MA1580.1/Jaspar

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAGTGTAGTAT
--TGTACAGTAT
C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
A C G T A C G T G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

NKX2-5/MA0063.2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AGAGTGTAGTAT
NNTTGAGTGNN----
A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGAGTGTAGTAT
BTBRAGTGSN----
A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----AGAGTGTAGTAT
NNNTTGAGTGGNNN--
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGTAGTAT
TTGAGTGSTT---
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGAGTGTAGTAT
CTYRAGTGSY----
A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGAGTGTAGTAT----
NNNANTGCAGTGCNNTT
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGAGTGTAGTAT--
ARGAGGMCAAAATGW
A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G C T C G T A A C T G C G A T C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T