| p-value: | 1e-5 |
| log p-value: | -1.227e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 37.50% |
| Number of Background Sequences with motif | 308.7 |
| Percentage of Background Sequences with motif | 0.44% |
| Average Position of motif in Targets | 106.0 +/- 62.2bp |
| Average Position of motif in Background | 103.9 +/- 66.0bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0065.1_Hoxc10/Jaspar
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTCATAGA---- TAAAGTCGTAAAACGT |
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|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCATAGA-- GTCATAAAAN |
|
|
|
NR1H4/MA1110.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTCATAGA NAGGTCATTGA |
|
|
|
HOXC10/MA0905.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCATAGA-- GTCGTAAAAT |
|
|
|
PH0066.1_Hoxc11/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTCATAGA---- TAAAGTCGTAAAATAG |
|
|
|
PH0047.1_Hoxa11/Jaspar
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTCATAGA---- TAAAGTCGTAAAACAT |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GTCATAGA-- GGCCATAAAAC |
|
|
|
HOXC9/MA0485.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCATAGA-- GTCGTAAAAT |
|
|
|
HOXB9/MA1503.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTCATAGA-- GTCGTAAAAT |
|
|
|
HOXD10/MA1506.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GTCATAGA-- GGTCGTAAAAC |
|
|
|