Information for 1-TGTTAGTCCG (Motif 8)

A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C G T A A G T C A C G T C G T A C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.718e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TGTTAGTCCG
NCNTTTGTTATTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0035.1_Gsc/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGTTAGTCCG----
AATCGTTAATCCCTTTA
A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGTCCG-----
NTTGTTAATCCCTCTNN
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTTAGTCCG
--TTAATCCG
A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

PH0123.1_Obox3/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGTCCG-----
ATAGTTAATCCCCCNNA
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTTAGTCCG-----
CNATAATCCGNTTNT
A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTTAGTCCG
-GCTAATCC-
A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTTAGTCCG-----
AGGCTAATCCCCAANG
A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTTAGTCCG-----
NTAGTTAATCCCCTTAN
A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PITX1/MA0682.2/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGTTAGTCCG
--CTAATCCC
A C G T A C T G A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C T G
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C