Information for 13-GCCTTATACT (Motif 27)

A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C G T C G T A C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.530e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background62.8 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCTTATACT
AACCTTATAT-
A C G T A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCTTATACT-----
GACTTTTAWTTTGAA
A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTATACT----
NCGTATTATAATCNTA
A C G T A C G T A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

GATA4/MA0482.2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCTTATACT-
TTCCTTATCTTT
A C G T A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCTTATACT----
TATAATTATAATATTC
A C G T A C G T A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCCTTATACT---
-CCTTTTATAGNC
A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTATACT-
GCTGACCTTGAACTN
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCCTTATACT-
-YCTTATCTBN
A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTATACT
TGACCTTGACCT
A C G T A C G T A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCTTATACT
NCCTTATCTG
A C T G A G T C A G T C A C G T A C G T C G T A A C G T C G T A A G T C A C G T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G