| p-value: | 1e-12 |
| log p-value: | -2.765e+01 |
| Information Content per bp: | 1.963 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 30.77% |
| Number of Background Sequences with motif | 12.3 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 104.0 +/- 43.2bp |
| Average Position of motif in Background | 86.3 +/- 50.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.25 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GACATTTAAGAG---- NAATTTTACGAGNTNN |
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PH0048.1_Hoxa13/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GACATTTAAGAG---- ANATTTTACGAGNNNN |
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HOXC13/MA0907.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GACATTTAAGAG- --NTTTTACGAGN |
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BARHL2/MA0635.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GACATTTAAGAG ANCGTTTANN-- |
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Hoxa11/MA0911.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GACATTTAAGAG- -ANTTTTACGACC |
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PH0085.1_Irx4/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GACATTTAAGAG- AATATACATGTAAAACA |
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NR4A1/MA1112.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GACATTTAAGAG NNTGACCTTTNN--- |
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PH0086.1_Irx5/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GACATTTAAGAG- AATATACATGTAAAATT |
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PH0082.1_Irx2/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GACATTTAAGAG- TAAATACATGTAAAATT |
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Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GACATTTAAGAG----- ----NTTAAGTGGTTNN |
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