Information for 2-CCAAAGTCTTAC (Motif 3)

T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C
Reverse Opposite:
C T A G A G C T C G T A T C G A T A C G C G T A A T G C A C G T C G A T A C G T A C T G A C T G
p-value:1e-5
log p-value:-1.178e+01
Information Content per bp:1.681
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif716.5
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets25.3 +/- 10.1bp
Average Position of motif in Background97.9 +/- 87.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCAAAGTCTTAC
TCCAAAGTCCAGA
A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCAAAGTCTTAC
TCCAAAGTCCAAA
A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGTCTTAC--
GGCAAAAGTCCAATAA
A C G T A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCAAAGTCTTAC--
ATGGAAAGTCGTAAAA
A C G T A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------CCAAAGTCTTAC
CANAGNNCAAAGTCCA--
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CCAAAGTCTTAC
GATACAAAGTATC--
A C G T A C G T A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCAAAGTCTTAC--
TATTCAAGGTCATGCGA
A C G T A C G T A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SOX10/MA0442.2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCAAAGTCTTAC
AAAACAAAGAA----
A C G T A C G T A C G T T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCAAAGTCTTAC-----
-TAAAGTCGTAAAATAG
T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAAAGTCTTAC-----
-TAAAGTCGTAAAACAT
T A G C G T A C C G T A C G T A G T C A A T C G A C G T A G T C A G C T C G A T C T G A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T