Information for 21-GAAGAGAGGTAA (Motif 20)

A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A G T C A C G T A G T C A C G T A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.905e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets176.0 +/- 0.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GAAGAGAGGTAA----
-----CAGGTAAGTAT
A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAAGAGAGGTAA
----AGRGGTCA
A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

ZNF652/MA1657.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAGAGAGGTAA-
-GAAAGAGTTAAA
A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A A C G T
A C G T A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGAGAGGTAA
GKBCARAGGTCA
A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A

ZKSCAN5/MA1652.1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAAGAGAGGTAA
GGAGGAGGTGAGAA--
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAAGAGAGGTAA
----TRAGGTCA
A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAGAGAGGTAA-----
GGCGAGGGGTCAAGGGC
A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAGAGGTAA
NGAAGC-------
A C G T A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAAGAGAGGTAA
GTAGGGCAAAGGTCA
A C G T A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAAGAGAGGTAA
RHHCAGAGAGGB--
A C G T A C G T A C T G C G T A C G T A A C T G C G T A A C T G C G T A A C T G A C T G A C G T C G T A C G T A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T