Information for 8-AGATTATATTCA (Motif 17)

C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C G T C G T A A C G T C G T A C G T A A C G T A G T C A C G T
p-value:1e-3
log p-value:-9.074e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGATTATATTCA--
TAAGATTATAATACGG
A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGATTATATTCA--
NANTATTATAATTNNN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

GATA1/MA0035.4/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGATTATATTCA
NNAGATTAGAN---
A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A A C G T A C G T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGATTATATTCA--
NNTAATTATAATNANN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

DPRX/MA1480.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGATTATATTCA
NGGATTATCT---
A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A
T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGATTATATTCA-
---GHATATKCAT
C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATTATATTCA-
NNAGATNVNWATCTN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

PB0064.1_Sox14_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATTATATTCA--
NNTAATTATAATTNNN
A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGATTATATTCA------
-GACCACATTCATACAAT
C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

DUXA/MA0884.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATTATATTCA
NTGATTAAATTAN
A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C G T C G T A A C G T A C G T A G T C C G T A
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G