Information for 7-GGAGCAATTTCA (Motif 7)

A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.054e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox11/MA0869.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAGCAATTTCA-----
--AACAATTTCAGTGTT
A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAATTTCA
CGGAGC-------
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCAATTTCA-
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF528/MA1597.1/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GGAGCAATTTCA
CCCAGGGAAGCCATTTC-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGAGCAATTTCA--
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAATTTCA
GGGAGGACNG---
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAGCAATTTCA-
TTTAGAACAATAAAAT
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGAGCAATTTCA-
TTAAGAACAATAAATT
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

Hmx1/MA0896.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGCAATTTCA----
ACAAGCAATTAATGAAT
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAGCAATTTCA----
ACAAGCAATTAATGAAT
A C G T A C T G A C T G C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T