Information for 7-GTAAGTGAGTTA (Motif 9)

A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A
Reverse Opposite:
A C G T C G T A C T G A G T A C C G A T A T G C C G T A A T G C A C G T A G C T C T G A A G T C
p-value:1e-5
log p-value:-1.272e+01
Information Content per bp:1.781
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif204.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets26.2 +/- 7.0bp
Average Position of motif in Background105.4 +/- 77.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX2/MA1113.2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTAAGTGAGTTA----
---NNTGATTTATGNN
A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAAGTGAGTTA-
-TAATTNAATTAA
A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A A C G T
A C G T A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

PHOX2A/MA0713.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAAGTGAGTTA
-TAATTAAATTA
A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A
A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTAAGTGAGTTA
-TAATTAAATTA
A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A
A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTAAGTGAGTTA-----
--AAATGATTTATGGCT
A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

NR1D2/MA1532.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTAAGTGAGTTA-
GGGTTAGTGGGTCAT
A C G T A C G T A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A A C G T
T C A G C A T G C A T G A C G T G A C T C G T A A T C G A C G T C T A G C A T G C T A G C A G T A G T C C T G A C A G T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTAAGTGAGTTA----
----RTGATTKATRGN
A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

Nkx3-2/MA0122.3/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGTGAGTTA
NTTAAGTGGTTNN
A C G T A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GTAAGTGAGTTA
CAGGTAAGTAT----
A C G T A C G T A C G T A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T

DUX4/MA0468.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTAAGTGAGTTA
-TGATTAAATTA
A C T G A G C T C T G A G T C A A T C G A C G T A T C G C G T A A C T G A G C T A C G T C G T A
A C G T C G A T C T A G C G T A A C G T C A G T T C G A T C G A C T G A A C G T A G C T C G T A