Information for 11-GCTAGTAAGC (Motif 31)

A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G T A A G T C A C G T C G T A A C T G A G T C
p-value:1e-3
log p-value:-8.179e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background20.2 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0032.1_Evx2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCTAGTAAGC---
CACCGCTAATTAGCGGT
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCTAGTAAGC----
ANNNCTAGTTAACNGNN
A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTAGTAAGC
ACTAGTTAAC
A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

PH0040.1_Hmbox1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCTAGTAAGC---
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0155.1_Prrx2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTAGTAAGC---
NTTCGCTAATTAGCTNT
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

PH0098.1_Lhx8/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTAGTAAGC---
CACCGCTAATTAGNNGN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

BCL6B/MA0731.1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCTAGTAAGC-
TGAATTCCTAGAAAGCA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A

PH0034.1_Gbx2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCTAGTAAGC----
AGCGCTAATTAGCGATT
A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0097.1_Lhx6_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCTAGTAAGC---
NNNCGCTAATTAGNNGA
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
T G C A G C T A G A T C G T A C T C A G G A T C G A C T T C G A C T G A A G C T A G C T C T G A C T A G A G C T C A T G A C T G C G T A

ZKSCAN1/MA1585.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCTAGTAAGC-
-ATAGTAGGTG
A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C T G A G T C A C G T
A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G