Information for 2-CTAGTGTATGGT (Motif 2)

A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A G T A C A G T C C G T A A C G T C T G A A G T C C G T A A G T C A C G T C G T A A C T G
p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.949
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.2 +/- 28.4bp
Average Position of motif in Background134.0 +/- 84.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTGTATGGT----
NNTNNTGTCTGGNNTNG
A C G T A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTGTATGGT
CNNNGCTACTGTANNN-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTAGTGTATGGT---
CCATTGTATGCAAAT
A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CTAGTGTATGGT
TNNTGCTACTGTNNNN-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTAGTGTATGGT
--ANCATATGGT
A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTAGTGTATGGT
--ANCATATGGT
A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTAGTGTATGGT
--ACCATATGGT
A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
A C G T A C G T C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T

OSR1/MA1542.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTAGTGTATGGT
TGCTACTGTT----
A C G T A C G T A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CTAGTGTATGGT
--AACATATGTT
A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T
A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CTAGTGTATGGT-
-NAACATATGTTT
A G T C A C G T C G T A C T A G A C G T A C T G A G C T C G T A A C G T A C T G A C T G A C G T A C G T
A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T