Information for 5-RTAYAMCWKMMA (Motif 5)

C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
Reverse Opposite:
A C G T A C T G A C T G G T C A C G T A C T A G A C G T A C G T C T A G A C G T C G T A A G C T
p-value:1e-3
log p-value:-9.114e+00
Information Content per bp:1.781
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif841.3
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets80.8 +/- 45.4bp
Average Position of motif in Background98.7 +/- 79.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RTAYAMCWKMMA
RYHYACCTGB--
C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RTAYAMCWKMMA
-TRCACCTGCY-
C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:3
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RTAYAMCWKMMA
-NGCACCTGCN-
C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
A C G T G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RTAYAMCWKMMA
--CCAACTGCCA
C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----RTAYAMCWKMMA
NGYCATAAAWCH----
A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:RTAYAMCWKMMA
---YAACBGCC-
C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:RTAYAMCWKMMA
----AACCGANA
C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-RTAYAMCWKMMA---
CGACCAACTGCCATGC
A C G T C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RTAYAMCWKMMA
GCACACCTGKNC
C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C

HOXD13/MA0909.2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----RTAYAMCWKMMA
CCCAATAAAAC-----
A C G T A C G T A C G T A C G T C T G A A C G T C G T A A G T C C G T A G T C A A G T C C G A T C A G T G T A C G T A C C G T A
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C A C G T A C G T A C G T A C G T A C G T