| p-value: | 1e-3 |
| log p-value: | -8.288e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.25% |
| Number of Background Sequences with motif | 1.1 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 112.0 +/- 0.0bp |
| Average Position of motif in Background | 147.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0063.1_Hoxb8/Jaspar
| Match Rank: | 1 |
| Score: | 0.78 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TTAATTGCCACT TTTATTAATTGCNNGN |
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Hmx1/MA0896.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTAATTGCCACT ANNCATTAATTGCTNGN |
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PH0041.1_Hmx1/Jaspar
| Match Rank: | 3 |
| Score: | 0.74 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTAATTGCCACT ANNCATTAATTGCTNGN |
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HOXB7/MA1501.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.72 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTAATTGCCACT GNTAATTACC--- |
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HOXA6/MA1497.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTAATTGCCACT NNTAATTACN--- |
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|
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTAATTGCCACT TTTNATTGCY--- |
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|
Hmx3/MA0898.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.71 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTAATTGCCACT ATTNNTTAATTGCTTGT |
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PH0043.1_Hmx3/Jaspar
| Match Rank: | 8 |
| Score: | 0.71 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTAATTGCCACT ATTNNTTAATTGCTTGT |
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|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 9 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TTAATTGCCACT GTTAATGGCC--- |
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Msx3/MA0709.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTAATTGCCACT NTAATTGN---- |
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