Information for 13-TGTGCAGAGCTA (Motif 20)

A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
Reverse Opposite:
G A C T C G T A C T A G A G T C A G C T A T G C A C G T A T C G A G T C G T C A A G T C G T C A
p-value:1e-6
log p-value:-1.422e+01
Information Content per bp:1.834
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets101.4 +/- 57.6bp
Average Position of motif in Background115.1 +/- 43.1bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCAGAGCTA
NTNTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCAGAGCTA
NNGTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTGCAGAGCTA
RGKGGGCGGAGC--
A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCAGAGCTA--
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------TGTGCAGAGCTA
GGGCCGTGTGCAAAAA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGTGCAGAGCTA
AGGGGGCGGGGCTG
A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGTGCAGAGCTA
-GTGGAT-----
A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TGTGCAGAGCTA--
AAGTGGGCGGGGCTTAN
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A A C G T A C G T
C T G A C T G A C T A G A C G T C T A G T A C G C T A G A G T C T A C G A C T G A C T G C T A G A T G C C A G T C G A T T C G A A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGTGCAGAGCTA
GCCGCGCAGTGCGT
A C G T A C G T A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGTGCAGAGCTA
-BTBRAGTGSN-
A C G T A C T G A C G T A C T G A T G C C G T A A T C G C T G A A C T G A G T C A C G T C G T A
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T