Information for 9-AGTACAAAGACA (Motif 11)

C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T
p-value:1e-4
log p-value:-9.232e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background148.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGTACAAAGACA
AAAACAAAGAA-
C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGTACAAAGACA
GGAACAAAGR--
C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGTACAAAGACA
-GAACAAAGGG-
C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
A C G T C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTACAAAGACA
VRRACAAWGG--
C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGTACAAAGACA--
AGAAGAACAAAGGACTA
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTACAAAGACA--
ATAAGAACAAAGGACTA
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTACAAAGACA
AAAACAAAGG--
C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGTACAAAGACA--
AAGTTCAAGGTCAGC
A C G T C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

TCF7L2/MA0523.1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGTACAAAGACA
AAAGATCAAAGGAA
A C G T A C G T C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTACAAAGACA
AGGTCAAGGTCA
C G T A A C T G A C G T C G T A A G T C C G T A C G T A C G T A A C T G C G T A A G T C C G T A
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A