Information for 17-TKGGAMAGCCCC (Motif 28)

A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A G T C C A G T A C T G A C G T A G T C A G T C G T A C C G T A
p-value:1e-4
log p-value:-1.098e+01
Information Content per bp:1.916
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets144.0 +/- 37.4bp
Average Position of motif in Background54.8 +/- 44.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:TKGGAMAGCCCC
--GGAAATCCCC
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:TKGGAMAGCCCC
--GGAAANCCCC
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:TKGGAMAGCCCC-
-GGGAAATCCCCN
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TKGGAMAGCCCC
--GGAAATTCCC
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ZNF682/MA1599.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TKGGAMAGCCCC---
CGGGCCAAGCCCCTAT
A C G T A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TKGGAMAGCCCC
--GGAAATTCCC
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TKGGAMAGCCCC-
AGGGGATTCCCCT
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TKGGAMAGCCCC
GGGGGAATCCCC
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

ZNF341/MA1655.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TKGGAMAGCCCC
GGGAACAGCCAC
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TKGGAMAGCCCC
-GGAACAGCCG-
A C G T A C T G A C T G A C T G C G T A G T A C G T C A A C T G A G T C A G T C A G T C A G T C
A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T