Information for 6-GCGGTAGGTA (Motif 12)

A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T C G T A A G T C A G T C A C T G A G T C
p-value:1e-3
log p-value:-8.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCGGTAGGTA-
CAGGTAAGTAT
A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCGGTAGGTA
ATAGTAGGTG
A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

GLIS2/MA0736.1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCGGTAGGTA
CTTCGCGGGGGGTC
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGGTAGGTA
NACAGTAGCN-
A C G T A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGGTAGGTA
GGCGGGAARN-
A C G T A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCGGTAGGTA--
ATTTACAGTAGCAAAA
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGGTAGGTA-
CACGGCAGTTGGTNN
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCGGTAGGTA---
NNGGCAGGTGCNN
A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

ZIC5/MA1584.1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GCGGTAGGTA-
GCNCAGCGGGGGGTCN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A A C G T
C A T G T G A C C T G A A G T C T C G A T C A G G A T C C T A G A C T G C A T G A C T G A C T G C A T G A G C T T G A C A C T G

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCGGTAGGTA--
ATGTACAGTAGCAAAG
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G