Information for 8-GGCAAACCGA (Motif 11)

A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets110.3 +/- 36.5bp
Average Position of motif in Background122.9 +/- 36.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGCAAACCGA--
----AACCGANA
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCAAACCGA--
--NHAACBGYYV
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

IRF3/MA1418.1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGCAAACCGA-----
GGGAAACGGAAACCGAAACTG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T A C G T A C G C T A G C T G A C T G A G C T A G T A C A T C G C T A G T C G A C T G A C G T A A T G C A T G C C T A G T G C A G C T A G C T A T A G C A G C T C T A G

IRF5/MA1420.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCAAACCGA----
CCGAAACCGAAACT
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

Stat2/MA1623.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGCAAACCGA----
-AGAAACAGAAACT
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCAAACCGA
GCCACACCCA
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGCAAACCGA---
-GWAAYHTGAKMC
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

TFCP2/MA0145.3/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGCAAACCGA---
---AAACCGGTTT
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCAAACCGA
-GTAAACAG-
A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A
A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCAAACCGA
TGGAAAA----
A C G T A C T G A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G C G T A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T