Information for 25-GAGTGTGCAGAA (Motif 39)

A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C T G A G T C C G T A A G T C C G T A A G T C A C G T A G T C
p-value:1e-2
log p-value:-6.734e+00
Information Content per bp:1.974
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.17%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.6 +/- 53.5bp
Average Position of motif in Background27.8 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GAGTGTGCAGAA-
GGGCCGTGTGCAAAAA
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAGTGTGCAGAA
NNGCGTGTGTGCNGCN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTGCAGAA---
NNGTATGTGCACATNNN
A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

MSANTD3/MA1523.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTGCAGAA
GTGAGTGNAC----
A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GAGTGTGCAGAA
TTTTCAGTGTGTGCA---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTGCAGAA---
NTNTATGTGCACATNNN
A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGTGCAGAA
GTGCCGTGTGCAAA-
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGTGTGCAGAA----
-CAATTGCAAAAATAT
A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGTGTGCAGAA----
AAAATATGCATAATAAA
A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

ZBTB26/MA1579.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGTGTGCAGAA-----
--TACTCCAGAAAAGAT
A C T G C G T A A C T G A C G T A C T G A C G T A C T G A G T C C G T A C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T