Information for 2-CCGATCCAAT (Motif 5)

A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C T G A C T G
p-value:1e-4
log p-value:-9.422e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DUX(Homeobox)/C2C12-Dux-ChIP-Seq(GSE87279)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGATCCAAT----
BCWGATTCAATCAAN
A C G T A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C A T G C C G A T A C T G C G T A A C G T A G C T A G T C C G T A C G T A A C G T A G T C G C T A G C T A T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CCGATCCAAT--
ACTAGCCAATCA
A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCGATCCAAT---
---AGCCAATCGG
A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCGATCCAAT--------
-CGACCCAATCAACGGTG
A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

NFYC/MA1644.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CCGATCCAAT----
---AGCCAATCAGA
A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGATCCAAT
MTGATGCAAT
A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCGATCCAAT
TKCTGTTCCA--
A C G T A C G T A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CCGATCCAAT----
---AACCAATCAGA
A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

ATF4/MA0833.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCGATCCAAT--
AAATGATGCAATAA
A C G T A C G T A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCGATCCAAT
ATGATGCAAT
A G T C A G T C A C T G C G T A A C G T A G T C A G T C C G T A C G T A A C G T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T