Information for 17-GAGTCACTAATG (Motif 20)

A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C T G C G T A A G T C A C G T A G T C
p-value:1e-3
log p-value:-9.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background95.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GAGTCACTAATG---
----NNCTAATGGNN
A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCACTAATG
NNATGAGTCATNNN--
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T A C G T A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCACTAATG
NTGAGTCATCN---
A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C A C G T A C G T A C G T

BATF/MA1634.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACTAATG
NATGAGTCATN----
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A A C G T A C G T A C G T A C G T

BATF3/MA0835.2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACTAATG
NATGAGTCATN----
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A A C G T A C G T A C G T A C G T

BATF::JUN/MA0462.2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACTAATG
NATGAGTCATN----
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A A C G T A C G T A C G T A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTCACTAATG
NNGGTGACTCATCANN-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
C A G T G A C T C A T G T C A G A G C T A C T G C G T A A T G C C A G T T G A C C T G A A G C T G A T C T G C A G T C A A C G T A C G T

FOSL1/MA0477.2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCACTAATG
NNATGAGTCATNN---
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
C T A G C T A G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A A C G T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCACTAATG
GATGAGTCAT-----
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAGTCACTAATG---
ATGGTTCAATAATTTTG
A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A A G T C A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G