Information for 3-GGCWAGGG (Motif 25)

A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C A G C T C G T A C T A G A G T C A G T C
p-value:1e-5
log p-value:-1.332e+01
Information Content per bp:1.872
Number of Target Sequences with motif65.0
Percentage of Target Sequences with motif9.08%
Number of Background Sequences with motif2331.7
Percentage of Background Sequences with motif4.87%
Average Position of motif in Targets102.4 +/- 53.1bp
Average Position of motif in Background101.6 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGCWAGGG-
AAGGCAAGTGT
A C G T A C G T A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCWAGGG--
TGGGGAAGGGCM
A C G T A C G T A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCWAGGG
GGGGGGGG
A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G
C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGCWAGGG---
NNAGGGACAAGGGCNC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T A C G T A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

KLF4/MA0039.4/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGCWAGGG--
NNGGGTGGGGNN
A C G T A C G T A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T A C G T
T A C G C A T G C T A G A T C G T A C G G A C T C A T G C A T G C T A G C T A G T A G C A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGCWAGGG----
--CAAGGHCANV
A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR5A1/MA1540.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCWAGGG---
GTCAAGGTCAC
A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T A C G T A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

ZNF148/MA1653.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGCWAGGG---
GGGGGAGGGGNG
A C G T A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T A C G T A C G T
T A C G T A C G C T A G T C A G T A C G G T C A A T C G A T C G T A C G T A C G T A C G T C A G

INSM1/MA0155.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCWAGGG----
TGTCAGGGGGCG
A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G A C G T A C G T A C G T A C G T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGCWAGGG
TNNGGGCAG---
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G A T C T G A A C T G A C T G C T A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T