| p-value: | 1e-3 |
| log p-value: | -7.353e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 10.2 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 120.0 +/- 0.0bp |
| Average Position of motif in Background | 77.7 +/- 72.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGCATAGGGC- TAGGGCAAAGGTCA |
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|
NEUROD2/MA0668.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGCATAGGGC ACCATATGGC |
|
|
|
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GGCATAGGGC- TGGGGCAAAGGTCA |
|
|
|
Pparg::Rxra/MA0065.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GGCATAGGGC- GTAGGGCAAAGGTCA |
|
|
|
PB0128.1_Gcm1_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGCATAGGGC----- TGCGCATAGGGGAGGAG |
|
|
|
PB0191.1_Tcfap2c_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGCATAGGGC-- NTGCCCTTGGGCGN |
|
|
|
NEUROG1/MA0623.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGCATAGGGC GACATATGTC |
|
|
|
NEUROG2/MA0669.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGCATAGGGC GACATATGTT |
|
|
|
TCF21(var.2)/MA1568.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGCATAGGGC- NGCCATATGGTG |
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|
|
PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GGCATAGGGC- VNAGGKCAAAGGTCA |
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