| p-value: | 1e-3 |
| log p-value: | -8.411e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.67% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 15.0 +/- 0.0bp |
| Average Position of motif in Background | 109.1 +/- 33.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA13/MA0650.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGATAAAACC CCCAATAAAAC- |
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HOXD13/MA0909.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.77 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGATAAAACC CCCAATAAAAC- |
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PH0078.1_Hoxd13/Jaspar
| Match Rank: | 3 |
| Score: | 0.74 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CGATAAAACC-- CTACCAATAAAATTCT |
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CDX1/MA0878.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGATAAAACC GGCCATAAAAC- |
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|
CDX4/MA1473.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGATAAAACC GGCAATAAAAC- |
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|
|
HOXD9/MA0913.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CGATAAAACC GCAATAAAAC- |
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|
|
HOXB13/MA0901.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CGATAAAACC- AACCAATAAAATTT |
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|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 8 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CGATAAAACC GTCATAAAAN- |
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|
|
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGATAAAACC NCYAATAAAA-- |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CGATAAAACC NGYCATAAAWCH |
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