Information for 1-KKAKWGARMSCS (Motif 1)

A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
Reverse Opposite:
A T C G A C T G A T C G A C G T A G C T A C G T A G T C C G A T T G A C A C G T G T A C G T A C
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.749
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif215.0
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets115.0 +/- 42.4bp
Average Position of motif in Background100.8 +/- 85.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:KKAKWGARMSCS
--ACTGAAACCA
A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
A C G T A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--KKAKWGARMSCS-
TTTGAGTGACAGCTA
A C G T A C G T A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:KKAKWGARMSCS
TGAGTGACAGSC
A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KKAKWGARMSCS
-TATTGAYY---
A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-KKAKWGARMSCS
NTGATTGACAGN-
A C G T A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-KKAKWGARMSCS--
CGTATCGAAACCAAA
A C G T A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----KKAKWGARMSCS
NNANTGATTGATNNNN
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--KKAKWGARMSCS
CGGAAGTGAAAC--
A C G T A C G T A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----KKAKWGARMSCS
NAAANTTATTGAANCAN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PBX3/MA1114.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---KKAKWGARMSCS--
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C T G A C T G C G T A A C T G G C A T A C T G G T C A C T G A G T C A A T G C A G T C T A C G A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G