Information for 2-RAGSAGTYYRWT (Motif 3)

C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T
Reverse Opposite:
C G T A C G A T A G T C C T G A C T G A C G T A A G T C A C G T A T C G A G T C A C G T A G C T
p-value:1e-6
log p-value:-1.566e+01
Information Content per bp:1.818
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif85.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets107.3 +/- 36.0bp
Average Position of motif in Background88.1 +/- 66.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----RAGSAGTYYRWT-
NTNNNAGGAGTCTCNTN
A C G T A C G T A C G T A C G T C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PH0116.1_Nkx2-9/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----RAGSAGTYYRWT-
TTTTAAGTACTTAAATT
A C G T A C G T A C G T A C G T C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PH0117.1_Nkx3-1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----RAGSAGTYYRWT-
TACTAAGTACTTAAATG
A C G T A C G T A C G T A C G T C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

NR1I3/MA1534.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RAGSAGTYYRWT
--AAAGTTCAT-
C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T
A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RAGSAGTYYRWT
GGGAGGACNG----
A C G T A C G T C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----RAGSAGTYYRWT-
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RAGSAGTYYRWT
AAGCACTTAA--
C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---RAGSAGTYYRWT-
GCGGAGGTGTCGCCTC
A C G T A C G T A C G T C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RAGSAGTYYRWT
BRRCVGTTDN--
C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T

ZNF652/MA1657.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-RAGSAGTYYRWT
GAAAGAGTTAAA-
A C G T C T G A C G T A A C T G A T G C C G T A A C T G A C G T A G C T A G C T C T A G C G T A A C G T
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T