| p-value: | 1e-3 |
| log p-value: | -8.240e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 196.0 +/- 0.0bp |
| Average Position of motif in Background | 148.6 +/- 19.3bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCCATCGTGA--- -NHGTCGTGAYDN |
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SOX2/MA0143.4/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCCATCGTGA NNCCATTGTNN |
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SOX18/MA1563.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCCATCGTGA -GCATTGTN- |
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SOX13/MA1120.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCCATCGTGA NNCCATTGTNN |
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|
YY1/MA0095.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCCATCGTGA GCNGCCATCTTG- |
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|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TCCATCGTGA GYCATCMATCAT-- |
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HOXA9/MA0594.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TCCATCGTGA--- ---GTCGTAAACG |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCCATCGTGA- -CCATTGTTYB |
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|
PB0168.1_Sox14_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCCATCGTGA--- NNNCCATTGTGTNAN |
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|
Sox17/MA0078.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCCATCGTGA CTCATTGTC- |
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