Information for 7-ACAGCATAAATG (Motif 8)

C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G
Reverse Opposite:
A T G C C G T A A C G T G C A T A C G T C T G A C G A T C T A G G T A C A G C T A T C G C G A T
p-value:1e-5
log p-value:-1.309e+01
Information Content per bp:1.735
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif23.53%
Number of Background Sequences with motif278.8
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets87.2 +/- 36.7bp
Average Position of motif in Background96.0 +/- 74.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX2/MA1113.2/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:ACAGCATAAATG---
--GTCATAAATCATT
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T A C G T A C G T
A C G T A C G T T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACAGCATAAATG----
-NNCCATAAATCATNN
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ACAGCATAAATG-
-GGCCATAAATCA
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T
A C G T C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACAGCATAAATG-
-NGYCATAAAWCH
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T
A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACAGCATAAATG---
--GTCATCAATCATT
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T A C G T A C G T
A C G T A C G T C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

POL012.1_TATA-Box/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACAGCATAAATG------
---GTATAAAAGGCGGGG
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ACAGCATAAATG------
---GTATAAAAGGCGGGG
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACAGCATAAATG
--GTCATAAAAN
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G
A C G T A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACAGCATAAATG--
----NACATATGGN
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACAGCATAAATG-
-----ACATATGG
C G T A T A G C C T G A C A T G G A T C C G T A A G C T C G T A C G T A G T C A A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G