Information for 2-TTGTTTAA (Motif 39)

A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A C G T A A G T C C G T A C G T A
p-value:1e-2
log p-value:-5.880e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif2682.9
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets62.7 +/- 31.6bp
Average Position of motif in Background96.9 +/- 97.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTGTTTAA
TTGTTTAC
A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C

FOXN3/MA1489.1/Jaspar

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTGTTTAA
TTGTTTAC
A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A
A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

FOXG1/MA0613.1/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTGTTTAA
TTGTTTAC
A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTAA
ATTGTTTAN
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Foxf1/MA1606.1/Jaspar

Match Rank:5
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTAA--
NNTGTTTACAN
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T
G C A T G A C T C G A T T C A G G A C T C G A T C G A T G T C A A G T C G C T A G C A T

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTAA-----
NNNTTTGTTTACNTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTTAA-----
NNNTTTGTTTACNTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTTTAA---
NNNNTTTGTTTACNNT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXO3/MA0157.2/Jaspar

Match Rank:9
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TTGTTTAA
TTGTTTAC
A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A
G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C

FOXF2/MA0030.1/Jaspar

Match Rank:10
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTTAA-----
NTTGTTTACGTTNN
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G