Information for 19-GAGCTAGCTAGC (Motif 31)

A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C
Reverse Opposite:
T A C G A G T C A C G T C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T A G T C
p-value:1e-4
log p-value:-1.031e+01
Information Content per bp:1.922
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.9 +/- 50.0bp
Average Position of motif in Background104.7 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTAGCTAGC----
ANNNCTAGTTAACNGNN
A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAGCTAGCTAGC---
GAAAACTAGTTAACATC
A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0155.1_Prrx2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGCTAGCTAGC----
AAAGCTAATTAGCGAAA
A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

PH0032.1_Evx2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGCTAGCTAGC----
ANCGCTAATTAGCGGTN
A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0034.1_Gbx2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGCTAGCTAGC----
AGCGCTAATTAGCGATT
A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

HMBOX1/MA0895.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGCTAGCTAGC
--GTTAACTAGN
A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0131.1_Pax4/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTAGCTAGC---
NNGNGCTAATTAGNTNA
A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T A C G T
C A T G G A C T A T C G T C A G C T A G A G T C C A G T C G T A C T G A A G C T G A C T G T C A C T A G G C A T A G C T A T G C C G T A

PH0045.1_Hoxa1/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAGCTAGCTAGC--
CTGAGCTAATTACCGT
A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAGCTAGCTAGC
TGGAGGTAATTAAC
A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C

PH0098.1_Lhx8/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGCTAGCTAGC---
CACCGCTAATTAGNNGN
A C G T A C G T A C T G C T G A A C T G A G T C A C G T C G T A A C T G A G T C A G C T C G T A A C T G A G T C A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T