| p-value: | 1e-6 |
| log p-value: | -1.438e+01 |
| Information Content per bp: | 1.741 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 26.67% |
| Number of Background Sequences with motif | 274.4 |
| Percentage of Background Sequences with motif | 0.46% |
| Average Position of motif in Targets | 85.8 +/- 17.7bp |
| Average Position of motif in Background | 97.0 +/- 71.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0139.1_Pitx3/Jaspar
| Match Rank: | 1 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGBAGCCAABCT---- GNNAGCTAATCCCCCN |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 2 |
| Score: | 0.57 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GGBAGCCAABCT---- -SCAGYCADGCATGAC |
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ZFP42/MA1651.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.56 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GGBAGCCAABCT----- NNNNGGCAGCCATTTTGNNNN |
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Nr2e3/MA0164.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.55 |
| Offset: | 6 |
| Orientation: | forward strand |
| Alignment: | GGBAGCCAABCT- ------CAAGCTT |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 5 |
| Score: | 0.55 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GGBAGCCAABCT ----GCTAATCC |
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Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 6 |
| Score: | 0.54 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGBAGCCAABCT CTGGCAGNCTGCCA |
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NFIX/MA0671.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.53 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGBAGCCAABCT -CGTGCCAAG-- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 8 |
| Score: | 0.53 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GGBAGCCAABCT -BCAGACWA--- |
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PH0026.1_Duxbl/Jaspar
| Match Rank: | 9 |
| Score: | 0.53 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGBAGCCAABCT------ -CGACCCAATCAACGGTG |
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GATA1/MA0035.4/Jaspar
| Match Rank: | 10 |
| Score: | 0.52 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGBAGCCAABCT-- ---TTCTAATCTAT |
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