Information for 2-ACTVTTAVAAGC (Motif 2)

C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G C T A G T C A C G T G T C A C G T A A G T C C T G A A C T G C G A T
p-value:1e-6
log p-value:-1.513e+01
Information Content per bp:1.730
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif57.14%
Number of Background Sequences with motif1038.8
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets105.8 +/- 40.5bp
Average Position of motif in Background102.5 +/- 84.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACTVTTAVAAGC
CCYMATAAAA--
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACTVTTAVAAGC
NCYAATAAAA--
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTVTTAVAAGC--
CTACCAATAAAATTCT
A C G T A C G T C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTVTTAVAAGC--
AACCCAATAAAATTCG
A C G T A C G T C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ACTVTTAVAAGC--
-------CAAGCTT
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACTVTTAVAAGC
GCTCGTAAAAA-
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:ACTVTTAVAAGC
-CYHATAAAAN-
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C
A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:ACTVTTAVAAGC-
--------CAGCC
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

OSR2/MA1646.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTVTTAVAAGC--
--AAACAGAAGCAG
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACTVTTAVAAGC
GCTATAAATAGC
C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C