Information for 2-GAGCCGGCTC (Motif 7)

A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
p-value:1e-4
log p-value:-9.215e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.5 +/- 0.5bp
Average Position of motif in Background54.5 +/- 0.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGCCGGCTC-----
AGAGCGGGGTCAAGTA
A C G T A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCCGGCTC
AAACCGGTTT
A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCCGGCTC-
NNNNTGACCCGGCGCG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GAGCCGGCTC
-----NGCTN
A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

NRF1/MA0506.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAGCCGGCTC
TGCGCAGGCGC
A C G T A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ZBTB6/MA1581.1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAGCCGGCTC
GTCCTTGAGCCCG---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAGCCGGCTC
GCTCGGSCTC
A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGCCGGCTC--
-ACCCGGATGTA
A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C A C G T A C G T
A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCGGCTC
CGGAGC------
A C G T A C G T A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGCCGGCTC
CTGCGCATGCGC
A C G T A C G T A C T G C G T A A C T G A G T C A G T C A C T G A C T G A G T C A C G T A G T C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C