Information for 13-CCCCCATTGA (Motif 33)

A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C G T A C T G A C T G A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.036e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background77.4 +/- 55.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0201.1_Zfp281_2/Jaspar

Match Rank:1
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------CCCCCATTGA-
AGGAGACCCCCAATTTG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCCCATTGA-----
TGTTCCCATTGTGTACT
A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

VEZF1/MA1578.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCCCCATTGA
CCCCCCACTT-
A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A
T A G C G T A C G T A C G T A C G T A C G T A C G T C A A G T C C G A T G C A T A C G T

YY2/MA0748.2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCATTGA
CGCCGCCATNN-
A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.65
Offset:4
Orientation:forward strand
Alignment:CCCCCATTGA--
----TATTGAYY
A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCATTGA
TACCCGCATN--
A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCCCCATTGA--
---CCATTGTTC
A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCATTGA-
TCGTACCCGCATCATT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCCCCATTGA---
---CCATTGTTYB
A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX13/MA1120.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCCCCATTGA--
-NNCCATTGTNN
A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C T G C G T A A C G T A C G T
A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T