Information for 25-CAGHAGGAGAGA (Motif 32)

G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A G T C G C A T A G T C T A G C A C G T C G T A G T A C A G C T A C T G
p-value:1e-2
log p-value:-6.744e+00
Information Content per bp:1.716
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif15.38%
Number of Background Sequences with motif243.7
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets123.5 +/- 17.5bp
Average Position of motif in Background94.7 +/- 72.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGHAGGAGAGA-
GGAGGAGGTGAGAA
A C G T G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAGHAGGAGAGA---
NNNACCGAGAGTNNN
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAGHAGGAGAGA-----
------NAGAGAAAGNA
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

TBX15/MA0803.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGHAGGAGAGA
----AGGTGTGA
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A
A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

TBX18/MA1565.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGHAGGAGAGA--
--GGAGGTGTGAAA
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A A C G T A C G T
A C G T A C G T C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CAGHAGGAGAGA
----AGGTGTGA
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A
A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGHAGGAGAGA
CCACACAGCAGGAGA--
A C G T A C G T A C G T A C G T A C G T G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGHAGGAGAGA-
---AAGGTGTGAA
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A A C G T
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CAGHAGGAGAGA
----AGGTGTGA
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A
A C G T A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGHAGGAGAGA----
---AAGGTGTGAAAAT
G T A C C T G A A C T G G A C T T G C A A T C G C T A G C G T A A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T