Information for 14-GTGGTAATCT (Motif 28)

A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C C G T A A G T C
p-value:1e-6
log p-value:-1.559e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets71.0 +/- 45.3bp
Average Position of motif in Background133.5 +/- 49.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTAATCT
AGGTGTTAAT--
A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GTGGTAATCT--
-TTCTAATCTAT
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTGGTAATCT-
---YTAATCCY
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GTGGTAATCT
--GCTAATCC
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T
A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

DPRX/MA1480.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGGTAATCT-
-AGATAATCCC
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGGTAATCT--
--NYTAATCCYB
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTGGTAATCT-
---TTAATCCG
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTGGTAATCT--
--GCTAATCCCC
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTAATCT
NNHTGTGGTTWN--
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGGTAATCT
--YSTTATCT
A C T G A C G T A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T
A C G T A C G T A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T