Information for 4-TCTGGCCGTC (Motif 13)

A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C T G A C T G A G T C A G T C C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.138e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets155.0 +/- 0.0bp
Average Position of motif in Background36.1 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCCGTC
GGTCTGGCAT--
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGCCGTC
VBSYGTCTGG-----
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCTGGCCGTC
CTGTCTGG-----
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCCGTC
TGTCTAGA----
A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTGGCCGTC-
---GGCVGTTR
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:6
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------TCTGGCCGTC
CCNNACCATCTGGCCTN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGCCGTC
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCTGGCCGTC--
--TGGCAGTTGG
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C A C G T A C G T
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCTGGCCGTC
NNCATCTGNN----
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCTGGCCGTC
NTTGGCANN-
A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C T G A C G T A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T