Information for 1-GGAACATAAACC (Motif 1)

A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C G T C G T A A C G T C T A G A C G T A C G T G T A C A G T C
p-value:1e-8
log p-value:-1.844e+01
Information Content per bp:1.962
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.5 +/- 43.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGAACATAAACC
GAAAMTGAAACT
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Stat2/MA1623.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAACATAAACC
AGAAACAGAAACT
A C G T A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGAACATAAACC
TGGAACAGMA---
A C G T A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGAACATAAACC---
--GTCATAAATCATT
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGAACATAAACC----
-NNCCATAAATCATNN
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAACATAAACC-
-NGYCATAAAWCH
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T
A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

FOXF2/MA0030.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAACATAAACC--
CAAACGTAAACAAT
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C A C G T A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAACATAAACC
GWAAYHTGAKMC
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

CDX1/MA0878.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGAACATAAACC
-GGCCATAAAAC
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C
A C G T C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAACATAAACC
GRAASTGAAAST
A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A G T C A G T C
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T