Information for 12-ATCACAAGGT (Motif 24)

C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A C G T A C T G A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-9.460e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets120.3 +/- 49.8bp
Average Position of motif in Background139.2 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCACAAGGT
GTCACATGAY
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATCACAAGGT---
--GTCAAGGTCAC
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCACAAGGT
GTCACGTGGT
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

ESRRA/MA0592.3/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATCACAAGGT----
-GCTCAAGGTCACA
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATCACAAGGT----
----CAAGGHCANV
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:ATCACAAGGT---
---TCAAGGTCAT
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATCACAAGGT--
--BTCAAGGTCA
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Rarg/MA0859.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATCACAAGGT---
AAGGTCAAAAGGTCAA
A C G T A C G T A C G T C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATCACAAGGT-
-NNATAAGGNN
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATCACAAGGT---
---TCAAGGTCAN
C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C