Information for 4-AGAGGCASAG (Motif 12)

C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G
Reverse Opposite:
G T A C A C G T T A C G A C G T A T C G A G T C A G T C A G C T G T A C A C G T
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.814
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif4.69%
Number of Background Sequences with motif804.3
Percentage of Background Sequences with motif1.66%
Average Position of motif in Targets94.3 +/- 54.9bp
Average Position of motif in Background102.5 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGAGGCASAG-
-GAGSCCGAGC
C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AGAGGCASAG-
-----CACAGN
C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGGCASAG-
AGGGTAACAGC
C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCASAG----
VNAGGKCAAAGGTCA
A C G T C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGGCASAG----
TGGGGCAAAGGTCA
C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAGGCASAG--
-AAACCACAGAN
C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCASAG----
GTAGGGCAAAGGTCA
A C G T C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCASAG----
AAACAGACAAAGGAAT
A C G T A C G T C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

SPI1/MA0080.5/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGAGGCASAG-----
AAAAAAGAGGAAGTGAAAAA
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C T G A C T G A C G T A T C A G C T G A C T A G C T A G T C G A C G T A T C A G C G A T T A C G T C G A C T G A C T G A C T G A C G T A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCASAG----
CANAGNNCAAAGTCCA
A C G T A C G T C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A