Information for 14-TAGGTCTAKT (Motif 32)

G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
Reverse Opposite:
C G T A G T A C A C G T C G T A A T C G C G T A A G T C A G T C A G C T C T G A
p-value:1e-5
log p-value:-1.349e+01
Information Content per bp:1.746
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif5.77%
Number of Background Sequences with motif573.3
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets107.9 +/- 47.4bp
Average Position of motif in Background99.5 +/- 64.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TAGGTCTAKT
TATAAGTAGGTCAA--
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAGGTCTAKT
-AGGCCTNG-
G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAGGTCTAKT
-AGGTCA---
G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

RORC/MA1151.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TAGGTCTAKT
ATAAGTAGGTCA---
A C G T A C G T A C G T A C G T A C G T G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAGGTCTAKT
-AGGCCTAG-
G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAGGTCTAKT
AAYTAGGTCA---
A C G T A C G T A C G T G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAGGTCTAKT
AAYTAGGTCA---
A C G T A C G T A C G T G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAGGTCTAKT
ATCAAGGTCA---
A C G T A C G T A C G T G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TAGGTCTAKT
WAABTAGGTCAV--
A C G T A C G T A C G T A C G T G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G A C G T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TAGGTCTAKT-
AAWCTAGGTCARDNN
A C G T A C G T A C G T A C G T G A C T C T G A A C T G C T A G C G A T A T G C G C A T G T C A C A T G A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A