Information for 17-CGCACGTGCATC (Motif 17)

A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C T G
p-value:1e-3
log p-value:-9.152e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOHLH2/MA1560.1/Jaspar

Match Rank:1
Score:0.83
Offset:0
Orientation:forward strand
Alignment:CGCACGTGCATC
CGCACGTGCA--
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CGCACGTGCATC
-KCACGTGMCN-
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CGCACGTGCATC
NNGCACGTNC---
A C G T A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T A C G T A C G T

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGCACGTGCATC
NGKCACGTGM---
A C G T A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
T C A G T A C G C A G T T G A C C G T A A G T C T C A G G C A T A C T G G T A C A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGCACGTGCATC
ACCACGTGCC--
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGCACGTGCATC
--CACGTGBN--
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGCACGTGCATC
ATCACGTGAC--
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
T G C A C A G T G T A C T G C A G A T C T C A G G A C T A C T G G T C A G A T C A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CGCACGTGCATC
-GGACGTGC---
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CGCACGTGCATC
GACACGTGCC--
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGCACGTGCATC
--CACGTG----
A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C T G A G T C C G T A A C G T A G T C
A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T