Information for 8-GCGCACAAGA (Motif 24)

A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T A C T G A C G T A C T G A G T C A C T G A G T C
p-value:1e-3
log p-value:-7.436e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif8.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background133.8 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCGCACAAGA--
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZBTB14/MA1650.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCGCACAAGA
CCCCGCGCACCC--
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A
T A G C A T G C T A G C A T G C T A C G A T G C T A C G T A G C T G C A A T G C T A G C A T G C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCGCACAAGA--
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GCGCACAAGA-
NTNTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGCACAAGA--
BMRVACAAWGGV
A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGCACAAGA-
-GACACATGGC
A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T
A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

PB0026.1_Gm397_1/Jaspar

Match Rank:7
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCGCACAAGA-
NNGTATGTGCACATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

ZBTB6/MA1581.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGCACAAGA--
NNGGCTCAAGGNN
A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGCACAAGA----
CTCACACAATGGCGC
A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

TCFL5/MA0632.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCGCACAAGA
TCACGCGCAC----
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C C G T A A G T C C G T A C G T A A C T G C G T A
A C G T A G T C C T G A A G T C C T A G G A T C T C A G T A G C G T C A G T A C A C G T A C G T A C G T A C G T