Information for 4-GGGCCAAGKCCT (Motif 7)

A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G G T A C A G T C A G C T A C G T A C T G A C T G A G T C A G T C G T A C
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.920
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.4 +/- 39.4bp
Average Position of motif in Background85.8 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAGKCCT-
GGGGCCGAGGCCTG
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF682/MA1599.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAGKCCT---
CGGGCCAAGCCCCTAT
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGGCCAAGKCCT----
-GACCACGCCCTTATT
A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGGCCAAGKCCT
----CNAGGCCT
A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Plagl1/MA1615.1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGGCCAAGKCCT
CCCTGGGGCCAGG----
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T A C G T A C G T A C G T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCAAGKCCT-
AAGGTCATGACCTT
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GGGCCAAGKCCT
----CTAGGCCT
A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAGKCCT-
GAGGTCATGACCTC
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAGKCCT
CGTGCCAAG----
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCAAGKCCT
NNTGCCAAGNN--
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C T G A A C T G A C T G A G T C A G T C A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T