Information for 13-RHATGGAKAGCA (Motif 14)

T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A
Reverse Opposite:
C G A T A T C G A T G C A C G T G T A C A G C T A G T C A G T C C G T A A G C T C A T G A G T C
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.712
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif158.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets76.2 +/- 50.0bp
Average Position of motif in Background100.5 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0108.1_Atf1_2/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RHATGGAKAGCA--
GAATGACGAATAAC
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:7
Orientation:forward strand
Alignment:RHATGGAKAGCA
-------CAGCC
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:RHATGGAKAGCA
--BTBRAGTGSN
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:RHATGGAKAGCA-
-TATGCWAATBAV
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RHATGGAKAGCA
-NATGGAAAAN-
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--RHATGGAKAGCA---
CTACTTGGATACGGAAT
A C G T A C G T T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----RHATGGAKAGCA
ACTATGAATGAATGAT-
A C G T A C G T A C G T A C G T A C G T T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:RHATGGAKAGCA
-AATGGAAAAT-
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:RHATGGAKAGCA
ATATGCAAATT-
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:RHATGGAKAGCA---
-----GGGAGGACNG
T C A G G T A C C T G A A C G T C T A G C T A G T C G A A C T G C G T A T A C G A T G C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G