| p-value: | 1e-4 |
| log p-value: | -9.617e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 20.00% |
| Number of Background Sequences with motif | 3.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 22.0 +/- 0.0bp |
| Average Position of motif in Background | 35.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CACAGGTCAACA CAAAGKTCAA-- |
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|
NR2F1/MA0017.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CACAGGTCAACA- CAAAGGTCAAGGG |
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|
PB0049.1_Nr2f2_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CACAGGTCAACA- TCTCAAAGGTCACGAG |
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|
PB0053.1_Rara_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CACAGGTCAACA- TCTCAAAGGTCACCTG |
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|
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CACAGGTCAACA CAAAGGTCAG-- |
|
|
|
NR1H2::RXRA/MA0115.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.69 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CACAGGTCAACA AAAGGTCAAAGGTCAAC- |
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|
|
COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer
| Match Rank: | 7 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CACAGGTCAACA GKBCARAGGTCA--- |
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|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 8 |
| Score: | 0.67 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CACAGGTCAACA ---AGGTCA--- |
|
|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
| Match Rank: | 9 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CACAGGTCAACA NRBCARRGGTCA--- |
|
|
|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CACAGGTCAACA -TRAGGTCA--- |
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