Information for 2-GGATCTGCGA (Motif 6)

A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C C G T A A C T G C G T A A C G T A G T C A G T C
p-value:1e-4
log p-value:-9.246e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background195.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTGCGA
CGCAGCTGCG-
A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

HAND2/MA1638.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTGCGA
NNCATCTGNN-
A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTGCGA
NGGATTAN---
A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

NHLH2/MA1529.1/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGATCTGCGA---
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGATCTGCGA-
-GGTCTGGCAT
A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGATCTGCGA
ANCAGGATGT----
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGATCTGCGA-
-AAGGTGTKAA
A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGATCTGCGA
TGGAACAGMA-
A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

Stat5b/MA1625.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTGCGA----
NNNTTCTGGGAANNN
A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A T C G C G T A A G C T A G C T G A C T T G A C G A C T C A T G C T A G C T A G C G T A C T G A C G T A G A C T T C A G

ASCL1/MA1100.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGATCTGCGA
NGCAGCTGCN-
A C G T A C T G A C T G C G T A A C G T A G T C A C G T A C T G A G T C A C T G C G T A
T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C A C G T