Information for 6-GAAAGATCTT (Motif 16)

A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T
Reverse Opposite:
T G C A C G T A T A C G T C G A C G A T T A G C G A C T C G A T C G A T A G T C
p-value:1e-7
log p-value:-1.632e+01
Information Content per bp:1.664
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.41%
Number of Background Sequences with motif471.3
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets131.7 +/- 54.8bp
Average Position of motif in Background93.6 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAAGATCTT
AGGAAACAGCTG
A C G T A C G T A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

POL005.1_DPE/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAAAGATCTT
-GAAGATGTT
A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T
A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T

HSF4/MA0771.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAAGATCTT---
GAANNTTCTAGAA
A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T A C G T A C G T A C G T
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GAAAGATCTT---
NNTTCTGGAANNTTCTAGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GAAAGATCTT
TTCTAGAABNTTCTA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

PB0144.1_Lef1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAGATCTT-
NNANTGATTGATNTTN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAAGATCTT
TGATKGATGR-
A C G T A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGATCTT
ATGATKGATGRC
A C G T A C G T A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

HSF1/MA0486.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAAGATCTT---
GAACGTTCTAGAA
A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T A C G T A C G T A C G T
C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAAAGATCTT
TTTGATTGATGN-
A C G T A C G T A C G T A C T G C G T A C G T A C T G A A T C G G C T A A G C T A T G C C G A T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T