Information for 16-GAATATTCATTA (Motif 19)

C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A
Reverse Opposite:
C G A T C T G A C T G A A C G T A C T G C G T A G T C A A C G T G C T A A G C T A C G T A G T C
p-value:1e-3
log p-value:-9.075e+00
Information Content per bp:1.800
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets159.0 +/- 0.0bp
Average Position of motif in Background60.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GAATATTCATTA
GAATATTCAT--
C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GAATATTCATTA
GHATATKCAT--
C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GAATATTCATTA-
ATGAATATTCATGAG
A C G T A C G T C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GAATATTCATTA----
--ACATTCATGACACG
C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAATATTCATTA
-AAAAGTCAA--
C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAATATTCATTA---
AATCAATTCAATAATT
A C G T C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GAATATTCATTA
NNATGAGTCATNN
A C G T C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A
C A T G A C G T T C G A G A C T C A T G G T C A T A C G G C A T G T A C C G T A A G C T G T A C C T G A

NFE2/MA0841.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAATATTCATTA
GATGAGTCATN-
C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T

ZNF274/MA1592.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAATATTCATTA-
NNCGAGAACTCATACN
A C G T A C G T A C G T C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

JUND/MA0491.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAATATTCATTA
NNATGAGTCATNN
A C G T C T A G C G T A C T G A C G A T C G T A A C G T A C G T A G T C C G T A A G C T A G C T C G T A
C T A G C A T G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A