Information for 3-ATATGHGGTATG (Motif 4)

T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C T G A A G T C A G T C C T G A A G T C C G T A C G A T C G T A A C G T
p-value:1e-5
log p-value:-1.317e+01
Information Content per bp:1.758
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif30.77%
Number of Background Sequences with motif384.9
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets69.2 +/- 21.8bp
Average Position of motif in Background100.5 +/- 82.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD3/MA0808.1/Jaspar

Match Rank:1
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATATGHGGTATG-
-----TGGAATGT
T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATATGHGGTATG
NNHTGTGGTTWN
T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ATATGHGGTATG
--CTGTGGTTTN
T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATATGHGGTATG
-NNTGTGGTTT-
T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATATGHGGTATG---
WYATGCATWATGCAT
T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G A C G T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ATATGHGGTATG
GTCTGTGGTTT-
T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ATATGHGGTATG
TTCCATATATGGAA--
A C G T A C G T A C G T A C G T T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATATGHGGTATG
CCATATATGG----
A C G T A C G T T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATATGHGGTATG
CCATATGT------
A C G T A C G T T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATATGHGGTATG
NNTTGAGGTTNN
T G C A A C G T C G T A A C G T C T A G G A C T C T A G C T A G A G C T G T C A A C G T A C T G
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T