Information for 17-CACGTACTMA (Motif 21)

A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A G C T G T C A A G T C A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.761e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif29.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets86.3 +/- 41.0bp
Average Position of motif in Background97.8 +/- 45.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CACGTACTMA
GCACGTACCC-
A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CACGTACTMA
GCACGTNC---
A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACGTACTMA
GCACGTAY---
A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CACGTACTMA
BGCACGTA----
A C G T A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CACGTACTMA
NNGCACGTNC---
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACGTACTMA---
TTATGTACTAATAA
A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

MAX::MYC/MA0059.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CACGTACTMA
ACCACGTGCTC-
A C G T A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
C T G A A G T C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A G C T G A T C A C G T

SOHLH2/MA1560.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACGTACTMA
NGCACGTGCG--
A C G T A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
A G C T A C T G A G T C C T G A G T A C T A C G A G C T C T A G T G A C C T A G A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CACGTACTMA
CCNNANCACGTGGTCN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

MNT/MA0825.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACGTACTMA
ACCACGTGCC--
A C G T A C G T A G T C C G T A A G T C A C T G A C G T C T G A A G T C A C G T G T C A C G T A
C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T A C G T