Information for 9-CTAGTAGTAA (Motif 30)

A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.997e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background40.2 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTAGTAGTAA---
AATATTAATAAAGA
A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTAGTAGTAA--
NNTGTAGGTAGCANNT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTAGTAGTAA--
--ACTAGTTAAC
A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTAGTAGTAA---
--GGTCGTAAAAA
A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAGTAGTAA---
--AGTCGTAAAAA
A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTAGTAGTAA--
NNNTTAGGTAGCNTNT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0077.1_Hoxd12/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTAGTAGTAA------
CAAGGTCGTAAAATCTT
A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTAGTAGTAA------
TAAGGTCGTAAAATCCT
A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXC9/MA0485.2/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTAGTAGTAA---
---GTCGTAAAAT
A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T

HOXD10/MA1506.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTAGTAGTAA---
--GGTCGTAAAAC
A G T C A C G T C G T A A C T G A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C