Information for 3-TATTCAGAACAT (Motif 5)

A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T
Reverse Opposite:
G T C A A C G T C T A G C G A T A G C T G T A C C G A T A C T G C G T A G T C A A C G T T C G A
p-value:1e-6
log p-value:-1.458e+01
Information Content per bp:1.766
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif28.57%
Number of Background Sequences with motif287.6
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets55.2 +/- 59.2bp
Average Position of motif in Background95.8 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TATTCAGAACAT-
ACATTCATGACACG
A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TATTCAGAACAT
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATTCAGAACAT
GTAATCDGATTA-
A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TATTCAGAACAT
CCGTATTATAAACAA
A C G T A C G T A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TATTCAGAACAT
NTAATTAATAT---
A C G T A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TATTCAGAACAT--
CAAACAACAACACCT
A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PHOX2B/MA0681.2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TATTCAGAACAT--
TTTAATCAAATTATAT
A C G T A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T A C G T A C G T
C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

PB0129.1_Glis2_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TATTCAGAACAT
AATATTAATAAAGA
A C G T A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TATTCAGAACAT
NATTCAAAT---
A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TATTCAGAACAT-
AAAATATGCATAATAAA
A C G T A C G T A C G T A C G T A G C T C G T A A C G T C G A T G T A C C G T A A C T G C T G A C G T A A G T C C G T A A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A