Information for 10-GGTCGACA (Motif 36)

C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G C G A T A G T C A C T G C G T A A G T C A G T C
p-value:1e-4
log p-value:-1.139e+01
Information Content per bp:1.916
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif63.1
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets96.6 +/- 60.9bp
Average Position of motif in Background88.7 +/- 48.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0067.1_Hoxc12/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTCGACA------
TTAGGTCGTAAAATTTC
A C G T A C G T A C G T C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PB0108.1_Atf1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGTCGACA---
NTTATTCGTCATNC
A C G T A C G T A C G T C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T A C G T
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTCGACA---
GGTCGTAAAAA
C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

HOXD10/MA1506.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTCGACA---
GGTCGTAAAAC
C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T A C G T
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGTCGACA---
GGTCGTAAAAT
C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTCGACA-
-RHTGWCAR
C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTCGACA
ARNTGACA
C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTCGACA------
TAAGGTCGTAAAATCCT
A C G T A C G T A C G T C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0077.1_Hoxd12/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTCGACA------
CAAGGTCGTAAAATCTT
A C G T A C G T A C G T C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGTCGACA--
--TTGACAGG
C T A G A C T G A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G