Information for 2-AAACGTATCC (Motif 19)

C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T C G T A A G T C A C T G A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.361e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background161.3 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAACGTATCC--
-AATGTATCAAT
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAACGTATCC------
NTNNCGTATCCAAGTNN
A C G T C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

DMRTA2/MA1478.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAACGTATCC---
-AATGTAACAATT
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAACGTATCC
GCACGTACCC
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAACGTATCC
CTAAACGG----
A C G T A C G T C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C
T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T A C G T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAACGTATCC---
-AATGTATCAATT
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

BHLHE23/MA0817.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AAACGTATCC--
AAACATATGTTT
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAACGTATCC------
-NNNGTAACTANGNNA
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAACGTATCC--
-AAGATATCCTT
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C A C G T A C G T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

Creb3l2/MA0608.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAACGTATCC
ACACGTGGC-
C G T A C G T A C G T A A G T C A C T G A C G T C G T A A C G T A G T C A G T C
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T