Information for 8-GAGTATCG (Motif 35)

C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G
Reverse Opposite:
A T G C A C T G G C T A C A G T T C G A A G T C G C A T G A T C
p-value:1e-5
log p-value:-1.152e+01
Information Content per bp:1.741
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif717.6
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets98.7 +/- 51.1bp
Average Position of motif in Background98.8 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF6/MA1509.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GAGTATCG--
-AGTTTCGGT
C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T
A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GAGTATCG-----
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GAGTATCG-----
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAGTATCG-----
GATGGGGTATCATTTTT
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGTATCG--
AATGTATCAAT
A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GAGTATCG-----
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAGTATCG-----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAGTATCG-----
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAGTATCG-----
AATAGGGTATCAATATT
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GAGTATCG-----
AATAGGGTATCAATTAT
A C G T A C G T A C G T A C G T C T A G C G T A C T A G A G C T G T C A C G A T A G T C A T C G A C G T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T