Information for 1-AMTTCTCTGACA (Motif 1)

C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
Reverse Opposite:
C A G T C A T G G A C T A G T C C G T A C T A G C G T A A C T G G C T A C G T A A C G T A G C T
p-value:1e-5
log p-value:-1.371e+01
Information Content per bp:1.697
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif2300.0
Percentage of Background Sequences with motif2.49%
Average Position of motif in Targets126.8 +/- 27.1bp
Average Position of motif in Background101.2 +/- 81.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AMTTCTCTGACA-
---GGTCTGGCAT
C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A A C G T
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AMTTCTCTGACA
VCCTCTCTGDDY
C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AMTTCTCTGACA
--TWGTCTGV--
C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AMTTCTCTGACA
TTCTAATCTAT--
A C G T C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AMTTCTCTGACA
NCCTTATCTG---
A C G T C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AMTTCTCTGACA
TTCTTATCTTT--
A C G T C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AMTTCTCTGACA
NNCTTATCTN---
A C G T C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AMTTCTCTGACA---
---TGTCTGDCACCT
C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AMTTCTCTGACA--
----VGCTGWCAVB
C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

GATA4/MA0482.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AMTTCTCTGACA
TTCCTTATCTTT--
A C G T A C G T C T G A G T C A A C G T C A G T T G A C C G A T A G T C A C G T A C T G C G T A G A T C G C T A
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T A C G T A C G T