Information for 12-TCGACATTACCA (Motif 10)

A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T C G T A C G T A A C G T A C T G A C G T A T G C A T C G C G T A
p-value:1e-10
log p-value:-2.465e+01
Information Content per bp:1.919
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.4 +/- 54.3bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCGACATTACCA
TGGAATGTACCA
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCGACATTACCA-----
--AACAATAACATTGTT
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TCGACATTACCA
---YCATTAMC-
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCGACATTACCA
--GCAATTAC--
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A
A C G T A C G T T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T A C G T

TEAD2/MA1121.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCGACATTACCA--
-TCACATTCCAGCC
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A A C G T A C G T
A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

HOXA7/MA1498.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCGACATTACCA
--GCAATTAC--
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A
A C G T A C G T A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C A C G T A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCGACATTACCA
--GCAATTAC--
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A
A C G T A C G T A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCGACATTACCA--
--CTCATTTGCATW
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TCGACATTACCA
NNCTCATTAT--
A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCGACATTACCA---
ATTTACAGTAGCAAAA
A C G T A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A