Information for 4-TTGAAAGCBCAA (Motif 5)

A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G T A C G A C T G A G T C A C G T C G A T A C G T G T A C C T G A C G T A
p-value:1e-5
log p-value:-1.258e+01
Information Content per bp:1.809
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif21.43%
Number of Background Sequences with motif133.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets102.2 +/- 42.0bp
Average Position of motif in Background109.0 +/- 76.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTGAAAGCBCAA----
--CCAAGCCCAACCAG
A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTGAAAGCBCAA---
GGCAAAAGTCCAATAA
A C G T A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

TCF7L1/MA1421.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTGAAAGCBCAA---
---AAAGATCAAAGG
A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G

NR4A1/MA1112.2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTGAAAGCBCAA-
-TTAAAGGTCAAA
A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A A C G T
A C G T C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGAAAGCBCAA
--CAAAGKTCAA
A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A
A C G T A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTGAAAGCBCAA
TTGACAGC----
A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTGAAAGCBCAA------
---AAAGATCAAAGGGTT
A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTGAAAGCBCAA
ANGNAAAGGTCA-
A C G T A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

Rarg/MA0859.1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTGAAAGCBCAA
AAGGTCAAAAGGTCAA
A C G T A C G T A C G T A C G T A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTGAAAGCBCAA-
TCCAAAGTCCAAA
A C G T A G C T C A T G C G T A C G T A C G T A A C T G G T A C A G T C A G T C G T C A C G T A A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A