Information for 6-CACAAGACTATG (Motif 11)

A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background130.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAAGACTATG
GTCACATGAY----
A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T

USF1/MA0093.3/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CACAAGACTATG
NNGTCACATGACNN--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CACAAGACTATG-
---AAAACAATGG
A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

USF2/MA0526.3/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CACAAGACTATG
NNGTCACATGACNN--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CACAAGACTATG--
-----GACAATGNN
A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

TFEB/MA0692.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACAAGACTATG
ATCACGTGAC----
A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CACAAGACTATG---
----AAACAATGGCA
A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACAAGACTATG--
---AAGGATATNTN
A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CACAAGACTATG-
-VVRRAACAATGG
A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CACAAGACTATG
--BCAGACWA--
A G T C C G T A A G T C C G T A C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T