Information for 20-AGCATCCTTGCC (Motif 20)

C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-9.057e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AGCATCCTTGCC--
---NNACTTGCCTT
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCATCCTTGCC-
GATAACATCCTAGTAG
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

NR5A1/MA1540.1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCATCCTTGCC
-NTGACCTTGAN
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C
A C G T C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:forward strand
Alignment:AGCATCCTTGCC---
----TACTTGGCAGA
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

ZNF263/MA0528.2/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:AGCATCCTTGCC--
--CCTCCTCCCCNN
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T T A G C A T G C A C G T T A G C T G A C C A G T T G A C T A G C A T G C G A T C T A G C A G T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGCATCCTTGCC
-ACATCCTGNT-
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C
A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:AGCATCCTTGCC--
------CTTGGCAA
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:AGCATCCTTGCC
-RCATTCCWGG-
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T

ETV4/MA0764.2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:AGCATCCTTGCC
NNCTTCCTGN--
C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-AGCATCCTTGCC
NNAYTTCCTGHN-
A C G T C G T A A C T G A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A G T C A G T C
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T