Information for 12-GTCTAGTTTCAG (Motif 12)

A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T C G T A A C T G C G T A A G T C
p-value:1e-5
log p-value:-1.187e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GTCTAGTTTCAG-
---TGGTTTCAGT
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

SIX2/MA1119.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTCTAGTTTCAG--
GTATCAGGTTTCAGNN
A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T
C T A G C A G T T G C A G C A T G A T C C G T A C A T G C T A G G A C T C A G T C G A T G T A C G C T A A C T G C G A T C G A T

MEF2A/MA0052.4/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAGTTTCAG--
NNTCTATTTTTAGNN
A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTCTAGTTTCAG
--CTATTTTTGG
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

IRF6/MA1509.1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GTCTAGTTTCAG-
----AGTTTCGGT
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTCTAGTTTCAG-
-TCTATTTATAGN
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCTAGTTTCAG
TGTCTAGA-----
A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCTAGTTTCAG---
TTCTATTTTTAGNNN
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTCTAGTTTCAG-
-KCTATTTTTRGH
A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCTAGTTTCAG
GKMTCADRTTWC--
A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T