Information for 6-TTTAAGTCGA (Motif 14)

A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A G T C A C G T A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.407e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background16.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTCGA----
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTCGA---
AAATTCAAGTGGNTTN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTCGA----
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx3-2/MA0122.3/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTAAGTCGA---
NTTAAGTGGTTNN
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTCGA---
AATNTTAAGTGGNTNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTAAGTCGA
-TTAAGTGGT
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTAAGTCGA
NTCAAGTGGN
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAGTCGA---
AATTTCAAGTGGCTTN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTAAGTCGA
NTCAAGTGG-
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTAAGTCGA
-AAAAGTCAA
A C G T A C G T A C G T C G T A C G T A A C T G A C G T A G T C A C T G C G T A
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A