Information for 2-CATCCAAA (Motif 23)

A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A
Reverse Opposite:
A C G T A C G T C G A T C T A G C T A G G T C A C G A T A T C G
p-value:1e-5
log p-value:-1.378e+01
Information Content per bp:1.788
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif15.07%
Number of Background Sequences with motif4607.3
Percentage of Background Sequences with motif9.59%
Average Position of motif in Targets99.4 +/- 54.9bp
Average Position of motif in Background99.9 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CATCCAAA--
ATATGCAAATT
A C G T A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T A C G T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CATCCAAA----
ATATGCAAATNNN
A C G T A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU2F3/MA0627.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CATCCAAA---
AATATGCAAATAA
A C G T A C G T A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T A C G T A C G T
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATCCAAA-
TTATGCAAAT
A C G T A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATCCAAA-
NATTCAAAT
A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CATCCAAA--
TATGCAAATC
A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T A C G T
G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATCCAAA-
ATATGCAAAT
A C G T A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATCCAAA----
TATGCWAATBAV
A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T A C G T A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATCCAAA----
WATGCAAATGAG
A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T A C G T A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

ZBTB26/MA1579.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CATCCAAA------
TACTCCAGAAAAGAT
A C G T A T G C C G T A C A G T G A T C A G T C G C T A T G C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T