Information for 15-GTGACTATGT (Motif 20)

A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T
Reverse Opposite:
G T C A A G T C C G T A A C G T C G T A A C T G A C G T A G T C C G T A A G T C
p-value:1e-5
log p-value:-1.366e+01
Information Content per bp:1.966
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif34.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets106.6 +/- 30.7bp
Average Position of motif in Background128.6 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGACTATGT--
NNNGTAACTANGNNA
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

Pax2/MA0067.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTGACTATGT
NCGTGACN----
A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGACTATGT---
GNTACTTTGTATC
A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
C A T G G C T A G C A T G C T A G A T C G C A T C G A T C G A T C T A G G C A T C G T A C G A T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTGACTATGT---
TWGHWACAWTGTWDC
A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTGACTATGT---
YDGHTACAWTGTADC
A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTGACTATGT--
NCCGTTGCTANGNGN
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGACTATGT-
--GACAATGNN
A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTGACTATGT
CTGTTGCTAGGS
A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGACTATGT--
NNCGTTGCTATGGNN
A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

RFX1/MA0509.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTGACTATGT--
CTGTTGCTATGGCA
A C G T A C G T A C T G A C G T A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A