Information for 3-CCCCGCTGCG (Motif 10)

A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G A G T C A C T G A C T G A C T G A C T G
p-value:1e-3
log p-value:-9.054e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets179.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CCCCGCTGCG
CCYCCYGCTGDG
A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCTGCG-
GACCCCCCGCTGCGC
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCTGCG
GACCCCCCGCTGTG
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC5/MA1584.1/Jaspar

Match Rank:4
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CCCCGCTGCG-
CGACCCCCCGCTGTGC
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C G T
T G A C A C T G T C G A G T A C T G A C T G A C G T A C G T A C G A T C C T A G A G T C A G C T T C A G G A C T A C T G G T A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCTGCG-
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CCCCGCTGCG-
GACCCCCCGCTGTGC
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CCCCGCTGCG-
-CCTGCTGAGH
A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CCCCGCTGCG---
TCNCCTGCTGNGNNN
A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCCGCTGCG
NNCCTGCTGNG
A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

Zic2/MA1629.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CCCCGCTGCG--
CCCCCTGCTGTGNN
A C G T A C G T A G T C A G T C A G T C A G T C A C T G A G T C A C G T A C T G A G T C A C T G A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G