Information for 19-GGAAATCCTCAG (Motif 22)

A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C T G A C T G C G T A A C G T A C G T A C G T A G T C A G T C
p-value:1e-3
log p-value:-8.980e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.0 +/- 0.0bp
Average Position of motif in Background140.2 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGAAATCCTCAG
GGAAATCCCC--
A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGAAATCCTCAG
GGAAATTCCC--
A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATCCTCAG
GGGAAATCCCCN-
A C G T A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGAAATCCTCAG
GGAAATTCCC--
A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGAAATCCTCAG
GGAAANCCCC--
A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

MZF1/MA0056.2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGAAATCCTCAG--
-CAAATCCCCACTT
A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G A C G T A C G T
A C G T G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGAAATCCTCAG-
-SSAATCCACANN
A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G A C G T
A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATCCTCAG
NACAGGAAAT------
A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGAAATCCTCAG
TCCAATCCACA-
A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGAAATCCTCAG
GGGGGAATCCCC--
A C G T A C G T A C T G A C T G C G T A C G T A C G T A A C G T A G T C A G T C A C G T A G T C C G T A A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T