Information for 23-AATGTGAATTGA (Motif 26)

C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C G T A A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.428e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.0 +/- 0.0bp
Average Position of motif in Background167.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AATGTGAATTGA-
--TGTGGATTNNN
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AATGTGAATTGA
NNTGTGGATTSS
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AATGTGAATTGA--
NNNTATTGAATTGNNN
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:AATGTGAATTGA--
------TATTGAYY
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATGTGAATTGA
TATGCWAATBAV
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AATGTGAATTGA
-ATTTGAATT--
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AATGTGAATTGA
TTATGCAAATTA-
A C G T C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AATGTGAATTGA
TTGAATGAAATTCGA
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AATGTGAATTGA----
-NNATNAATTGTTTNN
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AATGTGAATTGA
WATGCAAATGAG
C G T A C G T A A C G T A C T G A C G T A C T G C G T A C G T A A C G T A C G T A C T G C G T A
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G