Information for 15-CCTTAAGAGC (Motif 30)

A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C G T A C G T C G T A C G T A A C T G A C T G
p-value:1e-2
log p-value:-6.774e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background50.7 +/- 59.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCTTAAGAGC-
-CTYRAGTGSY
A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCTTAAGAGC-
-BTBRAGTGSN
A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTTAAGAGC--
--TTGAGTGSTT
A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTTAAGAGC
--TTAAGTGC
A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAGAGC-----
TCNCTTTACAGCGNNNT
A C G T A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAGAGC-----
TCNNTTTACAGCGNNNT
A C G T A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAGAGC-----
TCNNTTTACAGCGNNNT
A C G T A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTTAAGAGC-
--TTAAGTGGT
A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAGAGC-----
NTNNTTAAGTGGNTNAN
A C G T A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCTTAAGAGC-----
NTNNTTAAGTGGTTANN
A C G T A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G