Information for 16-GTAATCCAAC (Motif 37)

A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C T G C G T A A C G T A C G T C G T A A G T C
p-value:1e-3
log p-value:-6.954e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background92.3 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX1/MA0682.2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTAATCCAAC
CTAATCCC--
A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTAATCCAAC
ATAATCCC--
A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCAAC
CTTAATCCC--
A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTAATCCAAC
NNCTAATCCCNN
A C G T A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCAAC
GCTAATCC---
A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTAATCCAAC
-TAATCCCN-
A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTAATCCAAC
YTAATCCY--
A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTAATCCAAC
TTAATCCG--
A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTAATCCAAC
ATAATCCC--
A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTAATCCAAC
GCTAATCCCC-
A C G T A C T G A C G T C G T A C G T A A C G T A G T C A G T C C G T A C G T A A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T