Information for 4-TYTTTTGTCTTT (Motif 7)

A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
Reverse Opposite:
G T C A C T G A C G T A A T C G C G T A A G T C G C T A T C G A C G T A C T G A C T A G G T C A
p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.679
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif1086.3
Percentage of Background Sequences with motif2.41%
Average Position of motif in Targets115.0 +/- 50.0bp
Average Position of motif in Background99.8 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TYTTTTGTCTTT--
ANTCCTTTGTCTNNNN
A C G T A C G T A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TYTTTTGTCTTT
-CCTTTGTTTT-
A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TYTTTTGTCTTT
BCCWTTGTBYKV
A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TYTTTTGTCTTT
NNCTTTGTTNN-
A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TYTTTTGTCTTT--
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TYTTTTGTCTTT--
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX4/MA0867.2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TYTTTTGTCTTT
NCCTTTGTTC--
A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TYTTTTGTCTTT
-CCATTGTTTT-
A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TYTTTTGTCTTT
-CTATTGTTTT-
A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TYTTTTGTCTTT
-CCWTTGTY---
A C G T G A T C A G C T A C G T A G C T C G A T C T A G A C G T A T G C G C A T G A C T A C G T
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T