Information for 3-GTCATCGAAG (Motif 6)

A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C A C T G C G T A A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-9.644e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7/MA0769.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCATCGAAG--
-ANATCAAAGNN
A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G A C G T A C G T
A C G T C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCATCGAAG-----
NNNAGATCAAAGGANNN
A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GTCATCGAAG-
-----NGAAGC
A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

NR1H4/MA1110.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTCATCGAAG
NAGGTCATTGA--
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCATCGAAG---
AAAGATCAAAGGAA
A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G A C G T A C G T A C G T
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCATCGAAG-----
TATAGATCAAAGGAAAA
A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

PB0040.1_Lef1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTCATCGAAG-----
NANAGATCAAAGGGNNN
A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

JUN::JUNB/MA1132.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GTCATCGAAG
ATGAGTCATC----
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G
C T G A C G A T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G T A C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTCATCGAAG
NTGTCAN-----
A C G T A C G T A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCATCGAAG-
-ACATCAAAGG
A C T G A C G T A G T C C G T A A C G T A G T C A C T G C G T A C G T A A C T G A C G T
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G