| p-value: | 1e-8 |
| log p-value: | -2.062e+01 |
| Information Content per bp: | 1.826 |
| Number of Target Sequences with motif | 9.0 |
| Percentage of Target Sequences with motif | 0.94% |
| Number of Background Sequences with motif | 22.0 |
| Percentage of Background Sequences with motif | 0.05% |
| Average Position of motif in Targets | 113.6 +/- 39.9bp |
| Average Position of motif in Background | 107.3 +/- 58.8bp |
| Strand Bias (log2 ratio + to - strand density) | 2.6 |
| Multiplicity (# of sites on avg that occur together) | 1.56 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AAAYCMTAAAAT--- AGAGCCATAAAATTCG |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAAYCMTAAAAT --GTCATAAAAN |
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|
|
HOXC10/MA0905.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAAYCMTAAAAT --GTCGTAAAAT |
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|
|
PH0047.1_Hoxa11/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAAYCMTAAAAT-- TAAAGTCGTAAAACAT |
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|
|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAYCMTAAAAT- -NGYCATAAAWCH |
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|
|
HOXB9/MA1503.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAAYCMTAAAAT --GTCGTAAAAT |
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|
|
BARX2/MA1471.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAAYCMTAAAAT AAAAACCATTAC-- |
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|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AAAYCMTAAAAT---- AATGCAATAAAATTTAT |
|
|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAYCMTAAAAT -VGCCATAAAA- |
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|
|
HOXD12/MA0873.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAYCMTAAAAT -AGTCGTAAAAA |
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