Information for 9-CAACTATAGC (Motif 29)

A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.453e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif62.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background141.3 +/- 92.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAACTATAGC
GAACAATGG-
A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

MYB/MA0100.3/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAACTATAGC
ACCAACTGTC--
A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T A C G T

OSR1/MA1542.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAACTATAGC-
-NACAGTAGCN
A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C A C G T
A C G T G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAACTATAGC
AACCAATTAAT--
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAACTATAGC
AGAACAATGG-
A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAACTATAGC
KCCAAAAATAGC
A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAACTATAGC----
ATGTACAGTAGCAAAG
A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAACTATAGC----
ATTTACAGTAGCAAAA
A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAACTATAGC
GCTAAAAATAGC
A C G T A C G T A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAACTATAGC
CACCTGTTGC
A G T C C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G A G T C
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C