Information for 17-AGTGATTAGT (Motif 38)

C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T C G T A C G T A A C G T A G T C C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.102e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background116.1 +/- 104.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD3/MA0912.2/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGTGATTAGT
-GTAATTAG-
C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGTGATTAGT----
GTACTAATTAGTGGCG
A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

VENTX/MA0724.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGTGATTAGT
ACCGATTAG-
C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGTGATTAGT
-RGGATTAR-
C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGTGATTAGT
NNGGATTAGN
C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

EVX2/MA0888.1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGTGATTAGT
GGTAATTAGC
C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C

PH0138.1_Pitx2/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AGTGATTAGT----
TGAAGGGATTAATCATC
A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0062.1_Hoxb7/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGTGATTAGT----
GTAGTAATTAATGCAA
A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

LHX6/MA0658.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGTGATTAGT
NCTAATTAGT
C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T
T C A G A G T C G A C T T C G A T C G A A C G T A G C T T C G A T C A G A G C T

PH0130.1_Otx2/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGTGATTAGT----
TGTAGGGATTAATTGTC
A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C