Information for 17-GCTGGTCATGGA (Motif 19)

A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A C G T A C T G C G T A A G T C A G T C C G T A A C T G A G T C
p-value:1e-3
log p-value:-8.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets120.0 +/- 0.0bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCTGGTCATGGA
-NAGGTCATTGA
A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
A C G T C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCTGGTCATGGA
GGGGCTYGKCTGGGA
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Pax2/MA0067.1/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTGGTCATGGA
---AGTCACGC-
A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGTCATGGA
CYWSTGGTCARA--
A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTGGTCATGGA
--AGGTCA----
A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTGGTCATGGA--
--AGGTCAAGGTCA
A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCTGGTCATGGA-
---GGYAATGAAA
A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTGGTCATGGA
WDNCTGGGCA----
A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCTGGTCATGGA
CGCGCCGGGTCACGTA
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

ZNF341/MA1655.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGTCATGGA
NNGGCTGTTCCN---
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C T G C G T A
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C A C G T A C G T A C G T