Information for 10-TCTAATGCCC (Motif 29)

A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C G T A A C G T A C G T C G T A A C T G C G T A
p-value:1e-3
log p-value:-7.457e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif22.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background91.5 +/- 123.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TCTAATGCCC---
----ATGCCCACC
A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TCTAATGCCC
GCTAATCCCC
A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

OTX2/MA0712.2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCTAATGCCC-
NNCTAATCCCNN
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TCTAATGCCC
CCTAATCCGC
A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Isl1/MA1608.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCTAATGCCC
NNCTAATGGNN
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCTAATGCCC--
GNNAGCTAATCCCCCN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTAATGCCC--
-CTAATCCTCTT
A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C A C G T A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PITX2/MA1547.1/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCTAATGCCC
-ATAATCCC-
A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C
A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCTAATGCCC----
AGGCTAATCCCCAANG
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTAATGCCC------
GGGTGTGCCCAAAAGG
A C G T A G T C A C G T C G T A C G T A A C G T A C T G A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G