Information for 15-TTTAGGGTTTTT (Motif 20)

A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A G T C A C G T A A T G C A G T C G T A C A C G T C T G A G T C A C G T A
p-value:1e-6
log p-value:-1.384e+01
Information Content per bp:1.867
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif42.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets84.4 +/- 52.8bp
Average Position of motif in Background110.4 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)2.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT3/MA0757.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTAGGGTTTTT--
NTTATTGATTTTTT
A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGGGTTTTT
CCTTAATNGNTTTT
A C G T A C G T A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTTAGGGTTTTT
DGWTTTATGRCN---
A C G T A C G T A C G T A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TTTAGGGTTTTT--
ATTATCGATTTTTT
A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TTTAGGGTTTTT
NGANTTTTATGGCTCN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTTAGGGTTTTT
TTTTATGGCB---
A C G T A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T
G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTTAGGGTTTTT--
----GGGGATTTCC
A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

ONECUT1/MA0679.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTTAGGGTTTTT--
NNTTTATTGATTTTTT
A C G T A C G T A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTTAGGGTTTTT
NNGTTTTACGACTTTA
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TTTAGGGTTTTT-
NNGTANTGTTTTNC
A C G T A C G T A C G T A G C T C G T A C A T G C T A G A T C G G C A T A C G T A G C T A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C