Information for 20-GGAGATTGTC (Motif 34)

A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
p-value:1e-2
log p-value:-6.818e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background95.7 +/- 90.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGAGATTGTC
-CTCATTGTC
A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGAGATTGTC
----ATTGTT
A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C
A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T

MZF1/MA0056.2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGAGATTGTC
NNNTGGGGATTNN-
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAGATTGTC-----
-AAAATTGTTATGAA
A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGAGATTGTC-
----ATTGTTA
A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGAGATTGTC---
----ATTGTTTAN
A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGAGATTGTC-----
GGAAAAATTGTTAGGAA
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

DPRX/MA1480.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAGATTGTC-
-NGGATTATCT
A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C A C G T
A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGATTGTC------
CNNNTATTGTTCNNNNN
A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGAGATTGTC----
AGGGGGATTAGCTGCC
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C