Information for 2-AGGAGCTTCG (Motif 8)

C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
Reverse Opposite:
A T G C A C T G C G T A C G T A A C T G A G T C A C G T A T G C T A G C C G A T
p-value:1e-12
log p-value:-2.843e+01
Information Content per bp:1.849
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif77.8
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets80.8 +/- 44.6bp
Average Position of motif in Background100.4 +/- 51.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AGGAGCTTCG
----GCTTCC
C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.64
Offset:4
Orientation:forward strand
Alignment:AGGAGCTTCG
----GCTCCG
C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

IRF6/MA1509.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGGAGCTTCG--
---AGTTTCGGT
C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G A C G T A C G T
A C G T A C G T A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGAGCTTCG
CGCAGCTGCG
C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

ZNF682/MA1599.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGGAGCTTCG----
NNAGGGGCTTGGCCNN
A C G T A C G T C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G A C G T A C G T A C G T A C G T
T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGAGCTTCG
-CAAGCTT--
C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGGAGCTTCG
--CAGCC---
C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGGAGCTTCG
ADGGYAGYAGCATCT
A C G T A C G T A C G T A C G T A C G T C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

NHLH2/MA1529.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGGAGCTTCG----
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G A C G T A C G T A C G T A C G T
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGAGCTTCG
AGCAGCTGCT
C G T A A T C G T A C G C G T A A C T G A G T C A C G T G C A T G T A C A T C G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T