Information for 10-GAATGAGCATCA (Motif 13)

A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C T G A G T C A C G T A G T C C G T A A C G T A C G T A G T C
p-value:1e-4
log p-value:-1.112e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0017.1_Cux1_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAATGAGCATCA---
TAGTGATCATCATTA
A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

POU3F3/MA0788.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAATGAGCATCA-
AAATTAGCATAAT
A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A A C G T
G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAATGAGCATCA
ATAATGAGGT---
A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAATGAGCATCA
TAATTTGCATAA
A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
C G A T G T C A G C T A G C A T G C A T G C A T T C A G G T A C C T G A G A C T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAATGAGCATCA
BTVATTWGCATA-
A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAATGAGCATCA
NTAATGAGCT---
A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAATGAGCATCA
TAATTTGCATAA
A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GAATGAGCATCA
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAATGAGCATCA
ATGACTCAGCAD--
A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAATGAGCATCA
CAGCATGACTCAGCA---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G C G T A A C T G A G T C C G T A A C G T A G T C C G T A
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A A C G T A C G T A C G T