Information for 3-TTAGTTATGTCA (Motif 5)

A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C C G T A A C G T C G T A C G T A A G T C A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.036e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets187.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CREB1/MA0018.4/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTAGTTATGTCA--
-TTATGATGTCATA
A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A C G T G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

FOSL1::JUND(var.2)/MA1143.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTAGTTATGTCA-
---GTTACGTCAT
A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T A G G C A T A C G T C T G A G T A C T C A G C A G T T A G C T C G A A G C T

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTAGTTATGTCA
ACTAGTTAAC---
A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTAGTTATGTCA-
---RTTATGYAAB
A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TTAGTTATGTCA-
TATAAGTAGGTCAA
A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PH0020.1_Dlx1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTAGTTATGTCA-
ATTAATTANCTCAN
A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G

PB0176.1_Sox5_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTATGTCA
NNCTNAATTATGANN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:TTAGTTATGTCA-
------NTGTCAN
A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTAGTTATGTCA--
NNNTTAGTTAACTNANN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTAGTTATGTCA---
--TATTATGCAATAT
A C G T A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T