Information for 14-CCACACGT (Motif 34)

A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T
Reverse Opposite:
C G T A G A T C C T A G G C A T A C T G A G C T C T A G A C T G
p-value:1e-4
log p-value:-1.052e+01
Information Content per bp:1.821
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif156.8
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets97.5 +/- 54.5bp
Average Position of motif in Background94.2 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCACACGT--
--GCACGTNC
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T A C G T
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CCACACGT--
--GCACGTAY
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T A C G T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCACACGT-
DGCACACGTG
A C G T A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T
C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G

Arnt/MA0004.1/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CCACACGT-
---CACGTG
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

HIF1A/MA1106.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCACACGT--
NNGCACGTNC
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T A C G T
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCACACGT----
--GCACGTACCC
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCACACGT--
--ACACGTGC
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCACACGT
NWAACCACADNN
A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCACACGT---
---CACGTGBN
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCACACGT-
-BGCACGTA
A G T C A G T C C T G A A G T C C G T A A G T C C T A G C G A T A C G T
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A