Information for 4-BTCTGTACCCHA (Motif 4)

A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A
Reverse Opposite:
A C G T C A T G A C T G A C T G C T A G A G C T C G T A A T G C C G T A C T A G C G T A T A C G
p-value:1e-5
log p-value:-1.327e+01
Information Content per bp:1.741
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif363.7
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets129.5 +/- 52.2bp
Average Position of motif in Background100.1 +/- 67.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:BTCTGTACCCHA----
GGGTGTGCCCAAAAGG
A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-BTCTGTACCCHA
RGTTAGTGCCCY-
A C G T A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--BTCTGTACCCHA---
NNGTATGTGCACATNNN
A C G T A C G T A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--BTCTGTACCCHA---
NTNTATGTGCACATNNN
A C G T A C G T A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

FOXN3/MA1489.1/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:BTCTGTACCCHA
----GTAAACAA
A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:BTCTGTACCCHA---
ATTTGCATACAATGG
A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--BTCTGTACCCHA
AGGTCTCTAACC--
A C G T A C G T A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:BTCTGTACCCHA----
-NNHYTGACCTAGWTT
A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:BTCTGTACCCHA
TKCTGTTCCA--
A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-BTCTGTACCCHA----
NNNNGGTACCCCCCANN
A C G T A G T C A C G T A G T C C G A T A T C G A C G T C T G A A G T C G T A C A G T C G A T C C G T A A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C