Information for 2-CCAAGTWKRKGM (Motif 2)

A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
Reverse Opposite:
A C G T A G T C G T C A G A C T G T A C C G A T C G T A A G T C A C G T A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.744e+01
Information Content per bp:1.839
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif29.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets142.3 +/- 13.0bp
Average Position of motif in Background85.5 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGTWKRKGM
NNTGCCAAGNN-----
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAAGTWKRKGM
AACCAATTAAT---
A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCAAGTWKRKGM
GGTGCCAAGT------
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCAAGTWKRKGM
ACTCCTAATTAGTCGT
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCAAGTWKRKGM
CGTGCCAAG-------
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAAGTWKRKGM
VCAGGTRDRY--
A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCAAGTWKRKGM
NTCAAGTGG----
A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCAAGTWKRKGM
CCAATTAA----
A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCAAGTWKRKGM
RGMCCTACTRTGTGC
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGTWKRKGM
NNATAAGGNN----
A C G T A C G T A G T C A G T C C G T A C G T A A C T G A C G T C G T A A C T G C T A G A C G T A C T G G T C A
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T