| p-value: | 1e-6 |
| log p-value: | -1.482e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.68% |
| Number of Background Sequences with motif | 20.3 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 87.2 +/- 59.9bp |
| Average Position of motif in Background | 93.7 +/- 53.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.14 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATGAGGGATG-- ATGATKGATGRC |
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HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 2 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATGAGGGATG- -TGATKGATGR |
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Znf281/MA1630.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATGAGGGATG GGTGGGGGAGG |
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NFE2/MA0841.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATGAGGGATG GATGAGTCATN |
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MEIS1(var.2)/MA1639.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATGAGGGATG-- NNTGATTGATGNN |
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JDP2/MA0655.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATGAGGGATG ATGAGTCAT- |
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BACH2/MA1101.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----ATGAGGGATG---- NAANGATGAGTCATGNTTN |
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Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATGAGGGATG- -TGATTGATGA |
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JUNB/MA0490.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATGAGGGATG- NNATGAGTCATNN |
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GCM2/MA0767.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATGAGGGATG TATGCGGGTA- |
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