Information for 4-CGTTCAAG (Motif 32)

A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G C G T A C G T A A G T C A C T G
p-value:1e-2
log p-value:-4.968e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif122.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background108.2 +/- 89.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB12/MA1649.1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CGTTCAAG--
NNGTTCCAGNN
A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGTTCAAG----
AGGTCAAGGTCA
A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGTTCAAG-----
CTAAGGTTCTAGATCAC
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

NR6A1/MA1541.1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGTTCAAG-----
GTCAAGTTCAAGGTCAA
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

VDR/MA0693.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CGTTCAAG
TGAGTTCA--
A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGTTCAAG----
BCNGGTTCTAGANCN
A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGTTCAAG------
AAGTTCAAGGTCAGC
A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

ZBTB6/MA1581.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGTTCAAG---
NNGGCTCAAGGNN
A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGTTCAAG
CAAAGKTCAA-
A C G T A C G T A C G T A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGTTCAAG----
AGGTCAAGGTCA
A G T C A C T G A C G T A C G T A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A