Information for 4-TGTGAKSTGTGT (Motif 6)

A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
Reverse Opposite:
C T G A A G T C C T G A A G T C C G T A A T C G G T C A G C A T A G T C C G T A A G T C G T C A
p-value:1e-11
log p-value:-2.583e+01
Information Content per bp:1.780
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.28%
Number of Background Sequences with motif330.4
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets115.0 +/- 47.4bp
Average Position of motif in Background99.8 +/- 72.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGTGAKSTGTGT
NNHTGTGGTTWN---
A C G T A C G T A C G T A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGTGAKSTGTGT-
NNTGATTTATGNN
A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T A C G T
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGAKSTGTGT
NNNNTTGTGTGCTTNN-
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGTGAKSTGTGT
CTTTGATGTGSB-
A C G T A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T A C G T

TCF7L1/MA1421.1/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTGAKSTGTGT
CCTTTGATCTTT--
A C G T A C G T A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGAKSTGTGT
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0130.1_Gm397_2/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TGTGAKSTGTGT------
--NNGCGTGTGTGCNGCN
A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGTGAKSTGTGT---
-GTGCCGTGTGCAAA
A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T A C G T A C G T A C G T
A C G T C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TGTGAKSTGTGT
GTCTGTGGTTT----
A C G T A C G T A C G T A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGTGAKSTGTGT
CTGTGGTTTN---
A C G T A C G T C T A G A C G T A C T G C G T A C A G T T A G C A C G T C T A G A G C T C T A G A G C T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T