Information for 2-TCTAAATAGCAD (Motif 2)

A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A
Reverse Opposite:
G A C T A C G T A T C G A T G C C G A T C G T A C G A T A G C T A G C T C G T A A C T G G T C A
p-value:1e-5
log p-value:-1.210e+01
Information Content per bp:1.757
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1562.7
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets126.0 +/- 40.8bp
Average Position of motif in Background96.7 +/- 127.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU1F1/MA0784.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTAAATAGCAD---
-CTAATTTGCATATT
A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A A C G T A C G T A C G T
A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCTAAATAGCAD
-CTAATTAGCN-
A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A
A C G T A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G A T G C T A C G A C G T

PH0032.1_Evx2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCTAAATAGCAD-
CACCGCTAATTAGCGGT
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCTAAATAGCAD-
-CTCATTTGCATW
A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A A C G T
A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

HOXD3/MA0912.2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCTAAATAGCAD
-CTAATTAC---
A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A
A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C A C G T A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCTAAATAGCAD--
AGCGCTAATTAGCGATT
A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCTAAATAGCAD--
ACCCCTAATTAGCGGTG
A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

ARGFX/MA1463.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCTAAATAGCAD
TCTAATTAAA--
A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A
C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A A C G T A C G T

LHX6/MA0658.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCTAAATAGCAD
NCTAATTAGT--
A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A
T C A G A G T C G A C T T C G A T C G A A C G T A G C T T C G A T C A G A G C T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCTAAATAGCAD--
AAAGCTAATTAGCGAAA
A C G T A C G T A C G T A C G T A G T C A C G T C T G A C T G A C G T A A C G T G C T A A T C G A T G C C G T A C G T A A C G T A C G T
C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A