Information for 11-GCGTGTCATA (Motif 30)

A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G C G T A A G T C C G T A A G T C A C T G A G T C
p-value:1e-3
log p-value:-7.721e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background23.1 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCGTGTCATA
TGCGTG-----
A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GCGTGTCATA
--NTGTCAN-
A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCGTGTCATA
-CCTGTCAA-
A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCGTGTCATA---
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCGTGTCATA
TTGCGTGCVA--
A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GCGTGTCATA-
---TGTCANYT
A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A A C G T
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTGTCATA
NNGTCGCGTGNCAC-
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGTGTCATA
-GCTGTCAA-
A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GCGTGTCATA
CAAAGGCGTGGCCAG
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.61
Offset:-9
Orientation:reverse strand
Alignment:---------GCGTGTCATA
CAAAAAGGGGCGTGGCAT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C T G A C G T A G T C C G T A A C G T C G T A
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T A C G T