Information for 1-TTCACGCACG (Motif 8)

A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A G T C A C T G A C G T A C T G C G T A C G T A
p-value:1e-3
log p-value:-8.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets133.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TTCACGCACG
--CACGCA--
A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TTCACGCACG
TBGCACGCAA-
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

PAX6/MA0069.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTCACGCACG----
TTCACGCATGAGTT
A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

TFDP1/MA1122.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTCACGCACG
NNTTCCCGCCN-
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G
A T G C A T G C A C G T G A C T T A G C A T G C A T G C C T A G A T G C A T G C A T G C A C G T

PAX5/MA0014.3/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTCACGCACG
NNGGTCACGCTC-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T

TCFL5/MA0632.2/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTCACGCACG-
-TCACGCGCAC
A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G A C G T
A C G T A C G T A G T C C T G A A G T C C T A G G A T C T C A G T A G C G T C A G T A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCACGCACG
TTCCCGCCWG
A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TTCACGCACG---
-----GCACGTAY
A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTCACGCACG
NYTTCCCGCC--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G
T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTCACGCACG---
---NNGCACGTNC
A C G T A C G T A G T C C G T A A G T C A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C