Information for 9-TCCAGTGTTAGC (Motif 16)

A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C A G C T C G T A C G T A A G T C G T C A A G T C A C G T A C T G A C T G C G T A
p-value:1e-6
log p-value:-1.601e+01
Information Content per bp:1.950
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets107.9 +/- 48.8bp
Average Position of motif in Background89.9 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGTGTTAGC
NNNNTGCCAGTGATTG-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGTGTTAGC-
TTTTCAGTGTGTGCA
A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGTGTTAGC
NNCCATTGTNN--
A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCAGTGTTAGC
-CCATTGTTYB-
A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCAGTGTTAGC-----
NNNNCTGTTAACNNTNN
A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCAGTGTTAGC
-CCATTGTTC--
A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCAGTGTTAGC
NNCCATTGTNN--
A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCCAGTGTTAGC
NCCATTGTTC--
A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

Prdm15/MA1616.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGTGTTAGC-
NNTCCAGGTTTTCCN
A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C A C G T
C T A G A G T C A C G T G A T C G A T C C T G A A C T G T C A G G A C T G A C T A G C T A G C T T G A C G A T C G A C T

Sox11/MA0869.1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TCCAGTGTTAGC
AACAATTTCAGTGTT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T C T G A A C T G A G T C
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T A C G T A C G T A C G T