Information for 22-CAAATCTATAAA (Motif 29)

A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-8.090e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets106.0 +/- 0.0bp
Average Position of motif in Background113.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ONECUT1/MA0679.2/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAAATCTATAAA--
AAAAAATCAATAAATA
A C G T A C G T A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

ONECUT3/MA0757.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAAATCTATAAA
AAAAAATCAATAAT
A C G T A C G T A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAAATCTATAAA
AAAAAATCGATAAT
A C G T A C G T A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CAAATCTATAAA--------
-----GTATAAAAGGCGGGG
A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CAAATCTATAAA--------
-----GTATAAAAGGCGGGG
A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAATCTATAAA
-TAATCGATAA-
A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAATCTATAAA-----
-CTACCAATAAAATTCT
A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAATCTATAAA--
AAAAACCATTAAGG
A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAATCTATAAA
HNRAATCAAT---
A C G T A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAAATCTATAAA
TTCTAATCTAT---
A C G T A C G T A G T C C G T A C G T A C G T A A C G T A G T C A C G T C G T A A C G T C G T A C G T A C G T A
C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T A C G T A C G T A C G T