Information for 10-CACAAGGCGA (Motif 29)

A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C A G T C A C G T A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.568e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 0.0bp
Average Position of motif in Background128.7 +/- 46.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CACAAGGCGA--
--CAAGGHCANV
A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C G T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACAAGGCGA-
GTCAAGGTCAC
A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

SOX18/MA1563.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACAAGGCGA
CACAATGC--
A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACAAGGCGA
VRRACAAWGG--
A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAAGGCGA
BTCAAGGTCA
A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACAAGGCGA
GACACATGGC--
A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACAAGGCGA
NTCAAGGTCA
A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAAGGCGA
GTCACATGAY--
A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACAAGGCGA
BMRVACAAWGGV-
A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACAAGGCGA--
AAGTTCAAGGTCAGC
A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C