Information for 3-CGGTGAGA (Motif 23)

A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A T G C C G T A A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.332e+01
Information Content per bp:1.945
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif49.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets63.4 +/- 55.0bp
Average Position of motif in Background93.9 +/- 51.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX18/MA1565.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CGGTGAGA--
GGAGGTGTGAAA
A C G T A C G T A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A A C G T A C G T
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGTGAGA
AGGTGTGA
A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGTGAGA
AGGTGTGA
A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGGTGAGA--
CAGGTAAGTAT
A C G T A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A A C G T A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGTGAGA
AGGTGTGA
A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGTGAGA--
AGGTGTGAAM
A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A A C G T A C G T
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGGTGAGA----
AAGGTGTGAAAAT
A C G T A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGGTGAGA-
AAGGTGTGAA
A C G T A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A A C G T
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGTGAGA--
AGGTGTGAAA
A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A A C G T A C G T
C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A

TBX5/MA0807.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGTGAGA
AGGTGTGA
A G T C A C T G C T A G A C G T A T C G C G T A A C T G C G T A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A