Information for 7-CGGCCATCTC (Motif 15)

A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C G T A C T G A C T G A G T C A G T C A C T G
p-value:1e-3
log p-value:-7.942e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background96.9 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCATCTC-
GCNGCCATCTTG
A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY2/MA0748.2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCATCTC
CGCCGCCATNN-
A C G T A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCATCTC-
GCCGCCATCTTG
A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

NEUROD1/MA1109.1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGGCCATCTC---
NNNCCATCTGTNN
A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGCCATCTC--
--GCCATCTGTT
A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGCCATCTC----
-NNCCATCTGTNNN
A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

ZFP42/MA1651.1/Jaspar

Match Rank:7
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CGGCCATCTC-----
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCATCTC-----
CCNNACCATCTGGCCTN
A C G T A C G T A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGGCCATCTC--
--NNCATCTGNN
A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGCCATCTC--
--ACCATCTGTT
A G T C A C T G A C T G A G T C A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T