Information for 3-ATATTATWAAGC (Motif 6)

C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C
Reverse Opposite:
A C T G A G T C G A C T A C G T C G A T C G T A A C G T C G T A G T C A A C G T C G T A A G C T
p-value:1e-7
log p-value:-1.644e+01
Information Content per bp:1.759
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif23.81%
Number of Background Sequences with motif247.5
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets97.6 +/- 59.3bp
Average Position of motif in Background104.0 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0129.1_Glis2_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATATTATWAAGC-
AATATTAATAAAGA
A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C A C G T
G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATATTATWAAGC-
CCGTATTATAAACAA
A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PB0079.1_Sry_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATATTATWAAGC--
NANTATTATAATTNNN
A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C A C G T A C G T
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATATTATWAAGC--
NCGTATTATAATCNTA
A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATATTATWAAGC
CTAATATTGCTAAA-
A C G T A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATATTATWAAGC
CTAATATTGCTAAA-
A C G T A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ATATTATWAAGC--
NNTAATTATAATNANN
A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATATTATWAAGC
AAATAAGAAAAAAC
A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ATATTATWAAGC--
NNTAATTATAATTNNN
A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C A C G T A C G T
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATATTATWAAGC-
TAGGTAATAAAATTCA
A C G T A C G T A C G T C T G A C G A T C G T A C A G T C G A T G T C A G A C T C G T A C G T A C T G A A C T G A G T C A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A