Information for 16-TCCATAGTCCAA (Motif 20)

A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C T G C G T A A G T C A C G T C G T A A C G T A C T G A C T G C G T A
p-value:1e-3
log p-value:-8.592e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets162.0 +/- 0.0bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4A/MA0114.4/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TCCATAGTCCAA-
TCCAAAGTCCAAA
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TCCATAGTCCAA-
TCCAAAGTCCAGA
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TCCATAGTCCAA---
GGCAAAAGTCCAATAA
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TCCATAGTCCAA
CANAGNNCAAAGTCCA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCATAGTCCAA
NNCCATTGTNN--
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCATAGTCCAA
NNCCATTGTNN--
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCATAGTCCAA
NCCATTGTTC--
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCATAGTCCAA
--CAAAGKTCAA
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A
A C G T A C G T G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCATAGTCCAA-
ANNTCCATTGTTCNNN
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCCATAGTCCAA
NCCATTGTTY--
A C G T A G T C A G T C C G T A A C G T C G T A A C T G A C G T A G T C A G T C C G T A C G T A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T