| p-value: | 1e-3 |
| log p-value: | -8.589e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 170.0 +/- 0.0bp |
| Average Position of motif in Background | 186.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
| Match Rank: | 1 |
| Score: | 0.75 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TATCAAACAATG- ---VRAACAATGG |
|
|
|
SOX13/MA1120.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TATCAAACAATG--- ----AAACAATGGCA |
|
|
|
Sox5/MA0087.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.72 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | TATCAAACAATG ----NAACAAT- |
|
|
|
SOX14/MA1562.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TATCAAACAATG --CCGAACAATG |
|
|
|
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
| Match Rank: | 5 |
| Score: | 0.72 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TATCAAACAATG-- ----RAACAATGGN |
|
|
|
SOX2/MA0143.4/Jaspar
| Match Rank: | 6 |
| Score: | 0.71 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TATCAAACAATG--- ----AAACAATGGAA |
|
|
|
SOX9/MA0077.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | TATCAAACAATG- ----GAACAATGG |
|
|
|
PBX1/MA0070.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TATCAAACAATG CCATCAATCAAA- |
|
|
|
SOX8/MA0868.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.70 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TATCAAACAATG- ---AGAACAATGG |
|
|
|
PB0168.1_Sox14_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TATCAAACAATG---- -CTCACACAATGGCGC |
|
|
|