Information for 6-AACATACAGRAT (Motif 9)

C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T A G T C A C G T A C T G A C G T C G T A A C G T A C T G A C G T A C G T
p-value:1e-10
log p-value:-2.489e+01
Information Content per bp:1.912
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif19.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets85.2 +/- 43.3bp
Average Position of motif in Background93.4 +/- 46.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AACATACAGRAT
NANANAC-----
C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AACATACAGRAT
CAAACGTAAACAAT
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

PBX2/MA1113.2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AACATACAGRAT-
GTCATAAATCATT
C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AACATACAGRAT-
AAACAGACAAAGGAAT
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------AACATACAGRAT
AAAGTAAACAAAAATT--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AACATACAGRAT
AGAAACAGAAACT--
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T A C G T A C G T

FOXE1/MA1487.1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----AACATACAGRAT
CCTTAAATAAACAAT--
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AACATACAGRAT-
--AATAAACAATN
C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T A C G T
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Foxd3/MA0041.1/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----AACATACAGRAT
AAACAAACATTC-----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AACATACAGRAT--
NNCCATAAATCATNN
A C G T C G T A C G T A A G T C C G T A A C G T C G T A G T A C C G T A C T A G C T G A C G T A A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T