Information for 7-CCTTCTATCG (Motif 18)

A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C G T C G T A A C T G C G T A C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.272e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets119.0 +/- 0.0bp
Average Position of motif in Background134.4 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CCTTCTATCG
CACCTACTAT--
A C G T A C G T A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCTTCTATCG--
CCTTTTATAGNC
A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCTTCTATCG---
AGNGTTCTAATGANN
A C G T A C G T A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTTCTATCG--
CCATATATGGNA
A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

SRF/MA0083.3/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCTATCG---
TGNCCATATATGGTCA
A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTTCTATCG
GCTTCC----
A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTTCTATCG
AACCTTATAT--
A C G T A C G T A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTTCTATCG--
TNCCATATATGGNA
A C G T A C G T A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G A C G T A C G T
C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTCTATCG
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTCTATCG
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A G T C A C G T C G T A A C G T A G T C A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C