Information for 17-TATAATGGCAAA (Motif 20)

A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T C G T A A C G T C G T A
p-value:1e-3
log p-value:-8.718e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets161.0 +/- 0.0bp
Average Position of motif in Background167.7 +/- 1.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX6-3/MA1530.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TATAATGGCAAA
TTTAATGAN---
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TATAATGGCAAA-
---NATGGAAAAN
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

HOXB8/MA1502.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TATAATGGCAAA
-NTAATTGC---
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G T G A C A C G T A C G T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TATAATGGCAAA
-GTAATTGC---
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T

Isl1/MA1608.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATAATGGCAAA
NNCTAATGGNN--
A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TATAATGGCAAA-
---AATGGAAAAT
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

HOXA7/MA1498.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TATAATGGCAAA
-GTAATTGC---
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
A C G T A T C G A C G T G T C A C G T A C G A T A C G T T C A G T A G C A C G T A C G T A C G T

HOXB6/MA1500.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TATAATGGCAAA
-TTAATTAC---
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
A C G T A G C T A G C T G T C A C G T A A C G T A C G T C T G A A G T C A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TATAATGGCAAA
-NTAATTGN---
A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATAATGGCAAA
AAACAATGGAA--
A C G T A C G T C G T A A C G T C G T A C G T A A C G T A C T G A C T G A G T C C G T A C G T A C G T A
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T