Information for 11-ACTTACTAAGGT (Motif 11)

C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C T G A C G T
p-value:1e-4
log p-value:-9.524e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACTTACTAAGGT
CACCTACTAT---
A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTTACTAAGGT---
GACGATAATGAGCTTGC
A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

THRB(var.2)/MA1575.1/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTTACTAAGGT---
GTGACCTCATTGAGGTCAC
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C T A G G A C T T A C G C G T A T G A C A G T C A G C T A G T C T C G A G C A T A G C T T C A G T C G A A T C G A C T G G C A T A T G C C T G A G A T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACTTACTAAGGT---
AAACATAATGAGGTTGC
A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACTTACTAAGGT-
NNCGTTGCTATGGNN
A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACTTACTAAGGT
CTGTTGCTAGGS-
A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTTACTAAGGT
ACCACTTAA------
A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACTTACTAAGGT-
RGMCCTACTRTGTGC
A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------ACTTACTAAGGT-----
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

POU6F2/MA0793.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACTTACTAAGGT
--NTAATGAGCT
C G T A A G T C A C G T A C G T C G T A A G T C A C G T C G T A C G T A A C T G A C T G A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T