| p-value: | 1e-7 |
| log p-value: | -1.625e+01 |
| Information Content per bp: | 1.805 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 27.27% |
| Number of Background Sequences with motif | 67.6 |
| Percentage of Background Sequences with motif | 0.08% |
| Average Position of motif in Targets | 62.0 +/- 19.2bp |
| Average Position of motif in Background | 85.6 +/- 75.5bp |
| Strand Bias (log2 ratio + to - strand density) | 1.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GCATAAGGATTA-- ----VRGGATTARN |
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OTX2/MA0712.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GCATAAGGATTA--- ---AAGGGATTAGAA |
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Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GCATAAGGATTA ----NGGGATTA |
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BARX2/MA1471.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GCATAAGGATTA- -AAAAACCATTAC |
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PITX1/MA0682.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | GCATAAGGATTA- -----NGGATTAN |
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|
|
GSC/MA0648.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GCATAAGGATTA-- ----NNGGATTAGN |
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|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 6 |
| Orientation: | reverse strand |
| Alignment: | GCATAAGGATTA-- ------GGATTAGC |
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PITX3/MA0714.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | 5 |
| Orientation: | reverse strand |
| Alignment: | GCATAAGGATTA-- -----GGGATTANN |
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|
|
Crx/MA0467.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GCATAAGGATTA- --AAGAGGATTAG |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
| Match Rank: | 10 |
| Score: | 0.65 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GCATAAGGATTA- -----RGGATTAR |
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