Information for 6-GTACACAAGGAG (Motif 6)

A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C G A C T A C G T C A T G A C G T A C T G A G C T C G T A A G T C
p-value:1e-13
log p-value:-3.161e+01
Information Content per bp:1.864
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets106.1 +/- 54.3bp
Average Position of motif in Background65.0 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXK1/MA0852.2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTACACAAGGAG
AATGTAAACAAGGC-
A C G T A C G T A C G T A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
C G T A C T G A C A G T T C A G C G A T T G C A T G C A G T C A A G T C G T C A T C G A T A C G T A C G T G A C A C G T

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTACACAAGGAG
-NACATATGGN-
A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTACACAAGGAG
--NNATAAGGNN
A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTACACAAGGAG
ATGTAAACADGS--
A C G T A C G T A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTACACAAGGAG
--ACATATGG--
A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTACACAAGGAG
AAAACAAAGG---
A C G T A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTACACAAGGAG
-AACAKATGGY-
A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

MXI1/MA1108.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTACACAAGGAG
-GACACATGGC-
A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTACACAAGGAG-
GGACAGATGGCAG
A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTACACAAGGAG
GGAACAGATGGCA
A C G T A C T G C G A T C T G A A G T C C G T A G T A C C G T A C T G A A C T G A C T G C G T A A C T G
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A