| p-value: | 1e-3 |
| log p-value: | -9.130e+00 |
| Information Content per bp: | 1.781 |
| Number of Target Sequences with motif | 67.0 |
| Percentage of Target Sequences with motif | 6.27% |
| Number of Background Sequences with motif | 1857.8 |
| Percentage of Background Sequences with motif | 3.87% |
| Average Position of motif in Targets | 107.0 +/- 56.3bp |
| Average Position of motif in Background | 99.1 +/- 55.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.16 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CCATCCTT AAGATATCCTT |
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HOXA4/MA1496.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCATCCTT-- --GTCATTAG |
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NR5A1/MA1540.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCATCCTT--- NTGACCTTGAN |
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SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCATCCTT- BNTGDCCTTG |
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HOXB4/MA1499.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCATCCTT-- --ATCATTAG |
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|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCATCCTT-- --GTCATTAA |
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|
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HOXD4/MA1507.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCATCCTT-- --ATCATTAG |
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|
|
YY1/MA0095.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CCATCCTT GCNGCCATCTTG |
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|
|
HLTF/MA0109.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCATCCTT---- --AACCTTATAT |
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POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCATCCTT-- NNCTCATTAT |
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