Information for 13-GAGGTRGGAATC (Motif 18)

A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
Reverse Opposite:
A C T G C T G A A C G T A C G T A G T C A G T C A G C T C G T A A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.132e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets103.3 +/- 56.8bp
Average Position of motif in Background154.4 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)-3.2
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX18/MA1565.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAGGTRGGAATC
GGAGGTGTGAAA-
A C G T A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GAGGTRGGAATC
AAGGTGTGAA--
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GAGGTRGGAATC
-AGGTGTTAAT-
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGGTRGGAATC
-AGGTGTGAAA-
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGGTRGGAATC
DAGGTGTBAA--
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GAGGTRGGAATC
--CCTGGGAAAG
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
A C G T A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

E2F6/MA0471.2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGTRGGAATC
GGGGGCGGGAAGG
A C G T A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

ZNF75D/MA1601.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGGTRGGAATC
-ATGTGGGAAA-
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
A C G T T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGGTRGGAATC
-AGGTGTGAAA-
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
A C G T C T G A C T A G A C T G G C A T C T A G G C A T A T C G C T G A C G T A G T C A A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGGTRGGAATC
-AGGTGTGA---
A C T G C G T A A C T G A C T G A C G T C T G A A C T G A C T G C G T A C G T A A G C T G T A C
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T