Information for 12-GTTTAATTGAGT (Motif 19)

A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A G T C C G T A C G T A A C G T A C G T C G T A C G T A C G T A A G T C
p-value:1e-3
log p-value:-9.097e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GTTTAATTGAGT-
---TAATTGATTA
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

LHX2/MA0700.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTTAATTGAGT
-NNTAATTGGNN
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T

UNCX/MA0721.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTTTAATTGAGT
--NTAATTAN--
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A G C T C G A T C T G A C T G A C A G T G A C T C T G A T C A G A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTTTAATTGAGT
-TTTAATTGCN-
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

SHOX/MA0630.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTTTAATTGAGT
--TTAATTGG--
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T G A C T G C A T T C G A C T G A A C G T C G A T C T A G T C A G A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTTTAATTGAGT
--NTAATTGN--
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T

PRRX1/MA0716.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTTTAATTGAGT
--NTAATTAN--
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A G C T C G A T C T G A C T G A C A G T A G C T C T G A T C A G A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTTTAATTGAGT
--NTAATTGG--
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T

ALX3/MA0634.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTTTAATTGAGT
-NNTAATTAGA-
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A G C T C G A T C T G A C G T A C A G T G A C T C T G A T C A G C T G A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GTTTAATTGAGT
-TTTAAT-----
A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T