Information for 2-CCATCACTTGTA (Motif 3)

A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
Reverse Opposite:
A C G T C G T A A T G C C G T A C G T A A C T G A C G T A C T G C G T A A C G T A C T G C T A G
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.941
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets81.7 +/- 51.5bp
Average Position of motif in Background95.2 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)-2.2
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCATCACTTGTA----
CAATCACTGGCAGAAT
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

TFE3/MA0831.2/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCATCACTTGTA
--GTCACGTG--
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCATCACTTGTA
--ACCACTTGAA
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCATCACTTGTA
--GTCACGTGGM
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCATCACTTGTA--
----CACGTGTGCH
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCATCACTTGTA-
TCACCCATCAATAAACA
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CCATCACTTGTA
---CCACTTGAA
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCATCACTTGTA
CTGCCWVCTTTTRTA
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCATCACTTGTA
-GGTCACGTGC-
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCATCACTTGTA
--ATCACGTGAT
A G T C A G T C C G T A A C G T A G T C G T C A G T A C A C G T A C G T A T C G A C G T C G T A
A C G T A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T