Information for 4-CATGTAGTCCTA (Motif 6)

G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G C G T A A T G C A C G T C G T A A G T C C G T A A C G T A C T G
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.971
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets86.7 +/- 47.9bp
Average Position of motif in Background71.8 +/- 61.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0083.1_Irx3_1/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CATGTAGTCCTA
AAAATACATGTAATACT-
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CATGTAGTCCTA
AATATACATGTAATATA-
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CATGTAGTCCTA
AAAATACATGTAAAAAT-
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CATGTAGTCCTA
TAAATACATGTAAAATT-
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------CATGTAGTCCTA
AATATACATGTAAAATT-
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T A C G T

THAP11/MA1573.1/Jaspar

Match Rank:6
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------CATGTAGTCCTA
TGCTGGGAAATGTAGTCCN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
A G C T A C T G G A T C A G C T C T A G A C T G C T A G T C G A T C G A C G T A A G C T C T A G C A G T C T G A T C A G A C G T G A T C A G T C A G C T A C G T

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CATGTAGTCCTA
AATATACATGTAAAACA-
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CATGTAGTCCTA-
-----AGGCCTNG
G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

MXI1/MA1108.2/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATGTAGTCCTA
NNCATGTGNN----
A C G T A C G T G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGTAGTCCTA-
-NNCTAATCCCNN
G T A C C G T A A C G T A C T G A C G T C G T A A T C G A C G T A G T C A G T C A C G T C G T A A C G T
A C G T G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T