Information for 5-CCGTACCCAC (Motif 17)

A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G A C T G A C G T C G T A A G T C A C T G A C T G
p-value:1e-3
log p-value:-8.295e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.0 +/- 0.0bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF9/MA1107.2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCGTACCCAC---
CAGCCACACCCACCCC
A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T
T G A C T C G A T A C G T G A C A G T C T G C A T A G C T C G A A T G C T G A C A G T C G T C A A G T C G T A C A G T C T G A C

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCGTACCCAC----
NNNNGGTACCCCCCANN
A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

PB0094.1_Zfp128_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGTACCCAC-
TCTTTGGCGTACCCTAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGTACCCAC----
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGTACCCAC-
GCCACRCCCACY
A C G T A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGTACCCAC
GCCACACCCA-
A C G T A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGTACCCAC-
--ATGCCCACC
A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

RBPJ/MA1116.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCGTACCCAC-
-NNTTCCCANN
A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T
A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCGTACCCAC---
--GTACCCGCATN
A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

KLF4/MA0039.4/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGTACCCAC
CGCCCCACCCCC
A C G T A C G T A G T C A G T C A C T G A C G T C G T A A G T C A G T C A G T C C G T A A G T C
T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C