Information for 14-ATCCTTCAAACT (Motif 15)

C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T A C G T A C T G C G T A C G T A A C T G A C T G C G T A A C G T
p-value:1e-4
log p-value:-9.937e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets176.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATCCTTCAAACT---
TCACCCATCAATAAACA
A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATCCTTCAAACT
YCATCMATCA----
A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCCTTCAAACT
CCATCAATCAAA--
A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATCCTTCAAACT
--NATTCAAAT-
C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATCCTTCAAACT
GYCATCMATCAT---
A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ATCCTTCAAACT
AAGATATCCTT------
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATCCTTCAAACT
GATAACATCCTAGTAG--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:ATCCTTCAAACT
--CCTTTGAWGT
C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T
A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATCCTTCAAACT-
---TTTGAAACCG
C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

MYBL2/MA0777.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ATCCTTCAAACT---
AACCGTTAAACGGTC
C G T A A C G T A G T C A G T C A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C