Information for 18-CATAGTACATCC (Motif 27)

A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.404e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATAGTACATCC
TTATTAGTACATAN
A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CATAGTACATCC
-AAAGTTCAT--
A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C
A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATAGTACATCC
TCCAAAGTCCAAA-
A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATAGTACATCC
TCCAAAGTCCAGA-
A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CATAGTACATCC------
--GATAACATCCTAGTAG
A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------CATAGTACATCC
CANAGNNCAAAGTCCA---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CATAGTACATCC---
TTCNAAGTACTTNNNNN
A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CATAGTACATCC----
-----TACATCCGGGT
A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CATAGTACATCC
GCACAYAGTAGGKCY
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

PB0077.1_Spdef_1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CATAGTACATCC--------
----GTACATCCGGATTTTT
A G T C C G T A A C G T C G T A A C T G A C G T C G T A A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T