Information for 1-CCTYTTGCCC (Motif 6)

A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G T C A G G A T C C T G A G T C A T C G A C T G A A T C G A C T G
p-value:1e-9
log p-value:-2.187e+01
Information Content per bp:1.750
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif624.9
Percentage of Background Sequences with motif1.31%
Average Position of motif in Targets106.2 +/- 52.9bp
Average Position of motif in Background97.9 +/- 58.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTYTTGCCC--
TGACCTTTTGACCTC
A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCTYTTGCCC---
TGACCTTTTGACCTTT
A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----CCTYTTGCCC--
TTGACCTTTTGACCTT
A C G T A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCTYTTGCCC-
TGACCTTTGCCCCA
A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTYTTGCCC--
TGACCTTTGMCCTNB
A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T A C G T
G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCTYTTGCCC----
WCATTTTGKCCTCYT
A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCTYTTGCCC
CACCTGTTGC--
A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C A C G T A C G T

SCRT2/MA0744.2/Jaspar

Match Rank:8
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CCTYTTGCCC-
NNNCACCTGTTGCTNN
A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T
C G T A C T G A G T A C G T A C C T G A G T A C G A T C C G A T A T C G G A C T C A G T C T A G T G A C G C A T A G C T G A C T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCTYTTGCCC--
TGACCTTTGCCCTAN
A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RARA/MA0729.1/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------CCTYTTGCCC--
CATTGACCTTTTGACCTC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G C T A G C T C A G T A G C T C T A G A G T C A G T C A G T C A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C