Information for 9-AGAAGCCTAC (Motif 18)

C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C T G A G T C A C G T A C G T A G T C G A C T
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.953
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif30.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets100.8 +/- 40.5bp
Average Position of motif in Background114.9 +/- 48.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGAAGCCTAC
NGAAGC----
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AGAAGCCTAC
AAACAGAAGCAG--
A C G T A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAAGCCTAC
--AGGCCTNG
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGAAGCCTAC
--AAGCTTG-
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGAAGCCTAC---
---CACCTACTAT
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGAAGCCTAC
--AGGCCTAG
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAAGCCTAC
--CAGCC---
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------AGAAGCCTAC
NNNTTAGGTAGCNTNT
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAAGCCTAC-------
--RGMCCTACTRTGTGC
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAAGCCTAC
-BCAGACWA-
C T G A A C T G C G T A C G T A A C T G A G T C A G T C A C G T C G T A A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T