Information for 25-TGGGCADAGGGC (Motif 21)

C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C A G T C A G C T G A T C A C G T A C T G G T A C A T G C A G T C C G T A
p-value:1e-3
log p-value:-8.508e+00
Information Content per bp:1.732
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif293.4
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets120.0 +/- 25.0bp
Average Position of motif in Background106.0 +/- 82.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGGGCADAGGGC-
TAGGGCAAAGGTCA
A C G T C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGGGCADAGGGC-
GTAGGGCAAAGGTCA
A C G T A C G T C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCADAGGGC-
TGGGGCAAAGGTCA
A C G T C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGGCADAGGGC-
VNAGGKCAAAGGTCA
A C G T A C G T C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGGGCADAGGGC-
AGGGGTCAGAGGTCA
A C G T A C G T C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

CTCFL/MA1102.2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGGCADAGGGC--
--AGCAGGGGGCGC
C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T A C G T
A C G T A C G T T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGGGCADAGGGC-
GAGGTCAAAGGTCA
A C G T C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGGGCADAGGGC-
TGCCCTGAGGGCA
C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGGGCADAGGGC-
TGCCCTNAGGGCA
C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGGGCADAGGGC-
TGCCCTGAGGGCA
C G A T A C T G T A C G A C T G G T A C G T C A C A T G C T G A C T A G A C T G A C T G G T A C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A