Information for 2-GCCGAGTGGA (Motif 7)

A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C C G T A A G T C A C G T A G T C A C T G A C T G A G T C
p-value:1e-11
log p-value:-2.761e+01
Information Content per bp:1.966
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.8 +/- 57.5bp
Average Position of motif in Background62.6 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MTF1/MA0863.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCCGAGTGGA--
GTGCCGTGTGCAAA
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCGAGTGGA-
-TTRAGTGSYK
A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GCCGAGTGGA-
-----GTGGAT
A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGTGGA----
GGGCCGTGTGCAAAAA
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCGAGTGGA
BTBRAGTGSN
A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCGAGTGGA-----
TGCGGAGTGGGACTGG
A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCCGAGTGGA--
NNNTTGAGTGGNNN
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCGAGTGGA-
-TTGAGTGSTT
A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

MSANTD3/MA1523.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCGAGTGGA-
-GTGAGTGNAC
A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A A C G T
A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCGAGTGGA
NTCAAGTGG-
A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C T G A T C G C G T A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T