Information for 7-GACACAGG (Motif 27)

A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G
Reverse Opposite:
A G T C T G A C A C G T A T C G A G C T A C T G A C G T A G T C
p-value:1e-4
log p-value:-9.490e+00
Information Content per bp:1.918
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.59%
Number of Background Sequences with motif1129.6
Percentage of Background Sequences with motif2.38%
Average Position of motif in Targets87.9 +/- 53.7bp
Average Position of motif in Background100.9 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GACACAGG--
GACACATGGC
A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G A C G T A C G T
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

PRDM4/MA1647.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACACAGG-
NAGAAACAGNN
A C G T A C G T A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G A C G T
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GACACAGG
AAAACAAAGG
A C G T A C G T A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GACACAGG--
GTCACATGAY
A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G A C G T A C G T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GACACAGG
--CACAGN
A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GACACAGG---
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GACACAGG
TTGACAG---
A C G T A C G T A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GACACAGG
RACAAWGG
A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GACACAGG-
AAAACAAAGAA
A C G T A C G T A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GACACAGG
GGAACAAAGR
A C G T A C G T A C T G C G T A A G T C C T G A A T G C C G T A A C T G A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G