| p-value: | 1e-12 |
| log p-value: | -2.881e+01 |
| Information Content per bp: | 1.805 |
| Number of Target Sequences with motif | 15.0 |
| Percentage of Target Sequences with motif | 1.00% |
| Number of Background Sequences with motif | 32.3 |
| Percentage of Background Sequences with motif | 0.07% |
| Average Position of motif in Targets | 129.8 +/- 47.6bp |
| Average Position of motif in Background | 86.3 +/- 54.0bp |
| Strand Bias (log2 ratio + to - strand density) | -0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.13 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer
| Match Rank: | 1 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCGATCACT SCTGTCAVTCAV- |
|
|
|
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTCGATCACT NCYATMAATCAY- |
|
|
|
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCGATCACT NCTGTCAATCAN- |
|
|
|
GFI1/MA0038.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GTCGATCACT--- -CAAATCACTGCA |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCGATCACT GYCATCMATCAT- |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTCGATCACT YCATCMATCA-- |
|
|
|
PH0016.1_Cux1_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTCGATCACT--- ACCGGTTGATCACCTGA |
|
|
|
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTCGATCACT- TGTCTGDCACCT |
|
|
|
PKNOX1/MA0782.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GTCGATCACT NNGCTGTCACTCANN |
|
|
|
CUX1/MA0754.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTCGATCACT NTATCGATTA-- |
|
|
|