Information for 8-CACCATAAAG (Motif 16)

A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T C G A T A C G T C G T A A C G T A C T G A C T G C G A T A C T G
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.948
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif30.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets100.6 +/- 49.1bp
Average Position of motif in Background104.5 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CACCATAAAG--
NGYCATAAAWCH
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CACCATAAAG-
-GTCATAAAAN
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACCATAAAG
VGCCATAAAA
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CACCATAAAG
KGCCATAAAA
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACCATAAAG-
GGCCATAAAAC
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

HOXD13/MA0909.2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACCATAAAG-
CCCAATAAAAC
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

HOXA13/MA0650.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CACCATAAAG-
CCCAATAAAAC
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACCATAAAG
CCYMATAAAA
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACCATAAAG--
CACCATATGGCG
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T A C G T
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CACCATAAAG-
-CYHATAAAAN
A G T C C G T A G T A C A G T C C G T A A C G T C G T A C G T A C G T A A C T G A C G T
A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C