Information for 5-CCGTCTAC (Motif 33)

G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C
Reverse Opposite:
T A C G A G C T G C T A T A C G C G T A G T A C A C T G C A T G
p-value:1e-6
log p-value:-1.398e+01
Information Content per bp:1.598
Number of Target Sequences with motif849.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif2198.3
Percentage of Background Sequences with motif5.86%
Average Position of motif in Targets99.4 +/- 55.8bp
Average Position of motif in Background99.1 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CCGTCTAC-----
-CGTCTACACGGG
G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCGTCTAC
VBSYGTCTGG
A C G T A C G T G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCGTCTAC
CTGTCTGG
G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

MYBL1/MA0776.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCGTCTAC---
ACCGTTAACGGT
A C G T G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C A C G T A C G T A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCGTCTAC-
-TGTCTAGA
G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C A C G T
A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGTCTAC---
-CGTCTAGACA
G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C A C G T A C G T A C G T
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

BARHL1/MA0877.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCGTCTAC
NCGTTTAN
G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCGTCTAC
CTGTTTAC
G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C
A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGTCTAC--
NYYTGTTTACHN
A C G T A C G T G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C A C G T A C G T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCGTCTAC
TWGTCTGV
G T A C T G A C C A T G G C A T A T G C C G A T T C G A A T G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G