Information for 2-TGATCGTTAC (Motif 2)

A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A G T C A C T G C G T A A C G T A G T C C G T A
p-value:1e-5
log p-value:-1.155e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX1/MA0754.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGATCGTTAC
TAATCGATAA
A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

HOXA9/MA0594.2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:TGATCGTTAC--
--GTCGTAAACG
A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C A C G T A C G T
A C G T A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

CUX2/MA0755.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGATCGTTAC
TAATCGATAA
A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGATCGTTAC
DGATCRATAN
A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

OVOL2/MA1545.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGATCGTTAC---
GTACCGTTATGTG
A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

PH0044.1_Homez/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGATCGTTAC----
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

DMRTA2/MA1478.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGATCGTTAC---
-AATTGTTACATT
A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T
A C G T G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGATCGTTAC--
TGACCTTTNCNT
A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATCGTTAC
NTNATCGATA-
A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGATCGTTAC--
CTATAATTGTTAGCG
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T C G T A A G T C A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G