Information for 6-TRTAGCAGAGGC (Motif 6)

A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C
Reverse Opposite:
A T C G A G T C A T G C G C A T A T G C C G A T A T C G A G T C G A C T G T C A A G C T C G T A
p-value:1e-5
log p-value:-1.289e+01
Information Content per bp:1.658
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif944.7
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets138.8 +/- 33.9bp
Average Position of motif in Background99.5 +/- 71.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TRTAGCAGAGGC--
--AAACAGAAGCAG
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TRTAGCAGAGGC--
TGGGGCAAAGGTCA
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TRTAGCAGAGGC--
GTAGGGCAAAGGTCA
A C G T A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TRTAGCAGAGGC--
TAGGGCAAAGGTCA
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TRTAGCAGAGGC---
-GGGCCTGAGGCGGG
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T A C G T
A C G T A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TRTAGCAGAGGC--
----CCAGACRSVB
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:TRTAGCAGAGGC-
---ACCAGATGGC
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T
A C G T A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TRTAGCAGAGGC--
----HAWGRGGCCM
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C

TFAP2A/MA0003.4/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TRTAGCAGAGGC---
-NNGCCTGAGGCANN
A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C A C G T A C G T A C G T
A C G T A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TRTAGCAGAGGC
GTGGGGGAGGGG-
A C G T A C G T T C G A A C G T C G T A T C A G A T G C C G T A A T C G C G T A A T C G T A C G A T G C
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T