Information for 6-TAGTCAGTCTGC (Motif 8)

A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C A C G T C G T A
p-value:1e-4
log p-value:-9.422e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAGTCAGTCTGC
--VBSYGTCTGG
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TAGTCAGTCTGC
----CTGTCTGG
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TAGTCAGTCTGC
----TWGTCTGV
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TAGTCAGTCTGC-
---TGAGTCAGCA
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

POL002.1_INR/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TAGTCAGTCTGC
---TCAGTCTT-
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TAGTCAGTCTGC-----
-----NNTCTGCTGTNA
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C G A T G A T C G C A T C A T G G A T C G C A T A C T G G C A T A G C T G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TAGTCAGTCTGC
SCTGTCAVTCAV-
A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TAGTCAGTCTGC-
---TGACTCAGCA
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TAGTCAGTCTGC----
-GGTCANNGTGACCTN
A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---TAGTCAGTCTGC
NNGCTGTCACTCANN
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A C T G A G T C
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A