Information for 3-TTGGGAGCTAAA (Motif 4)

A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A G T C A G T C C G T A C G T A
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTGGGAGCTAAA
--CGGAGC----
A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

E2F3/MA0469.3/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTGGGAGCTAAA--
ATTTTGGCGCCAAAAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C G T
C T G A C G A T C G A T G C A T C A G T T A C G C A T G G A T C C T A G G T A C A T G C G T C A C G T A C G T A G C T A G A C T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGGGAGCTAAA
TTTGGCGCCAAA
A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

E2F8/MA0865.1/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTGGGAGCTAAA
TTTGGCGGGAAA
A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

PH0170.1_Tgif2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTGGGAGCTAAA-
GTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTGGGAGCTAAA---
CCTTCGGCGCCAAAAGG
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F4/MA0470.2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGAGCTAAA-
NAATGGCGCCAAAA
A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A

E2F7/MA0758.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTGGGAGCTAAA-
TTTTGGCGGGAAAA
A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

ZNF16/MA1654.1/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTGGGAGCTAAA---------
AATAGGGAGCCATGGAAGGTTTT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A A C G T C T G A C T A G C A T G A T C G C T G A C T A G G A T C G A T C T G C A A G C T C A T G T C A G T C G A C T G A C T A G C T A G A G C T A C G T A G C T A G C T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TTGGGAGCTAAA
NNTTGGCANN----
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T C G T A C G T A C G T A
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T