Information for 17-ATAGGTGAAGGA (Motif 20)

C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T C G T A A C G T
p-value:1e-4
log p-value:-9.538e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ATAGGTGAAGGA--
--AGGTCAAGGTCA
C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATAGGTGAAGGA--
--AGGTCAAGGTCA
C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

SNAI3/MA1559.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATAGGTGAAGGA
AACAGGTGCA---
A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A
C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ATAGGTGAAGGA
NNGACAGGTGCNN--
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATAGGTGAAGGA
TGCGCATAGGGGAGGAG
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

MYOD1/MA0499.2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATAGGTGAAGGA
NNGACAGGTGCNN--
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G A C G T A C G T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ATAGGTGAAGGA--
--TGGGGAAGGGCM
C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A A C G T A C G T
A C G T A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATAGGTGAAGGA---------
-AANGTGAAGNANNGTNAAGG
C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T C G A C T A G A C T G A C G T C T A G T C G A T C G A C T A G C G T A C T G A T C A G C T A G C T A G C G A T C G T A C G T A C T G A T C A G C T A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATAGGTGAAGGA
TCTCAAAGGTCACGAG
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ATAGGTGAAGGA--
GCGGAGGTGTCGCCTC
A C G T A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A C T G C G T A A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C