Information for 23-CTATCTATTA (Motif 35)

A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T C G T A A C T G
p-value:1e-2
log p-value:-6.797e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif31.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets156.0 +/- 0.0bp
Average Position of motif in Background108.4 +/- 81.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX2/MA0755.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTATCTATTA
TTATCGATTA
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTATCTATTA
NTATCGATTA
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTATCTATTA-
-TATCGATNAN
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

VENTX/MA0724.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTATCTATTA-
--ACCGATTAG
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTATCTATTA---
AAAAACCATTAAGG
A C G T A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Isl1/MA1608.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTATCTATTA---
--ATCCATTAGCA
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTATCTATTA
TAATCAATTA
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTATCTATTA-
-AAACMATTAN
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T
A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTATCTATTA---
ATTATCGATTTTTT
A C G T A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PAX7/MA0680.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTATCTATTA
TAATCGATTA
A G T C A C G T C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A
C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A