Information for 3-CAAGGGCGGC (Motif 26)

A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G A G T C A G T C A G T C A C G T A C G T A C T G
p-value:1e-4
log p-value:-9.627e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background136.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAAGGGCGGC-
AGATGGCGGCG
A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C A C G T
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGCGGC
GTCAAGGTCAC-
A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGCGGC
NTCAAGGTCA--
A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGGCGGC
AAGTTCAAGGTCAGC
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGGCGGC---
NNTNAGGGGCGGNNNN
A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAGGGCGGC
BTCAAGGTCA--
A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAGGGCGGC
CAAGGHCANV
A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

KLF15/MA1513.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAGGGCGGC--
-GGGGGCGGGGC
A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C A C G T A C G T
A C G T T A C G T A C G A T C G A T C G C A T G A G T C A T C G A T C G A T C G T A C G T A G C

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAAGGGCGGC----
--GGGGCGGGGCCR
A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C A T G C T A G A C T G A C T G G A T C C T A G C A T G C T A G T C A G G A T C G A T C T C A G

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAAGGGCGGC
NBYCAAGGTCAC-
A C G T A C G T A C G T A G T C C G T A C G T A A C T G A C T G A C T G A G T C A C T G A C T G A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T