Information for 8-GAAAGTAACAAC (Motif 13)

A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C G T A C G T C G T A A G T C A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.718e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets7.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAAAGTAACAAC---
AAAAATAACAAACGG
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

DMRTA2/MA1478.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GAAAGTAACAAC-
-AATGTAACAATT
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T
A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAAGTAACAAC
-AATGTATCAAT
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAAAGTAACAAC-
-AATGTATCAATT
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T
A C G T G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAAAGTAACAAC----
-CAAACAACAACACCT
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0093.1_Zfp105_1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTAACAAC--
AACAAACAACAAGAG
A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0120.1_Foxj1_2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAAGTAACAAC-----
--ATGTCACAACAACAC
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAAAGTAACAAC-
ADGGYAGYAGCATCT
A C G T A C G T A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAAGTAACAAC
-AAAGTAAACA-
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAAGTAACAAC-
-AAACAAACATTC
A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A A G T C C G T A C G T A A G T C A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C