| p-value: | 1e-3 |
| log p-value: | -7.037e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 6.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 52.0 +/- 0.0bp |
| Average Position of motif in Background | 143.0 +/- 38.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
| Match Rank: | 1 |
| Score: | 0.81 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GTATAATTAG- ---TAATTAGN |
|
|
|
VSX2/MA0726.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.81 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GTATAATTAG --NTAATTAG |
|
|
|
VSX1/MA0725.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.81 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GTATAATTAG --NTAATTAG |
|
|
|
PRRX2/MA0075.3/Jaspar
| Match Rank: | 4 |
| Score: | 0.79 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GTATAATTAG --NTAATTAG |
|
|
|
LBX1/MA0618.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.79 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GTATAATTAG --TTAATTAG |
|
|
|
ARGFX/MA1463.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.79 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTATAATTAG- -TTTAATTAGN |
|
|
|
LHX9/MA0701.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.79 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GTATAATTAG --NTAATTAG |
|
|
|
VAX1/MA0722.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.78 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GTATAATTAG --NTAATTAG |
|
|
|
HOXD3/MA0912.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.78 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GTATAATTAG --GTAATTAG |
|
|
|
EMX1/MA0612.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.77 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GTATAATTAG --CTAATTAG |
|
|
|