| p-value: | 1e-2 |
| log p-value: | -6.139e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 16.0 |
| Percentage of Target Sequences with motif | 1.65% |
| Number of Background Sequences with motif | 342.7 |
| Percentage of Background Sequences with motif | 0.72% |
| Average Position of motif in Targets | 106.3 +/- 52.9bp |
| Average Position of motif in Background | 98.6 +/- 54.9bp |
| Strand Bias (log2 ratio + to - strand density) | 2.1 |
| Multiplicity (# of sites on avg that occur together) | 2.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAAAA VGCCATAAAA |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCCTAAAA KGCCATAAAA |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAAAA-- NGYCATAAAWCH |
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CDX1/MA0878.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAAAA- GGCCATAAAAC |
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|
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CCCTAAAA---- AGAGCCATAAAATTCG |
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|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCCTAAAA- CYHATAAAAN |
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|
|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
| Match Rank: | 7 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAAAA NGCAATTAAA |
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|
|
HOXA13/MA0650.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAAAA- CCCAATAAAAC |
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|
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TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 9 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCCTAAAA-- GNCTATAAAAGG |
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HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer
| Match Rank: | 10 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCCTAAAA CCYMATAAAA |
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