Information for 12-GTCTATGTATAA (Motif 13)

A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.099e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0198.1_Zfp128_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTCTATGTATAA-
TGTATATATATACC
A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTCTATGTATAA-
-TCTATTTATAGN
A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

PH0148.1_Pou3f3/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCTATGTATAA----
AAAATATGCATAATAAA
A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTCTATGTATAA--
----ATGAATATTC
A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

MEF2B/MA0660.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTCTATGTATAA-
-GCTATTTATAGC
A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTCTATGTATAA--
----ATGMATATDC
A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

MEF2A/MA0052.4/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCTATGTATAA--
NNTCTATTTTTAGNN
A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCTATGTATAA---
TCTTTATATATAAATA
A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTCTATGTATAA--
---AATGTATCAAT
A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCTATGTATAA-
-GCTATTTTTAGC
A C T G A C G T A G T C A C G T C G T A A C G T A C T G A C G T C G T A A C G T C G T A C G T A A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C