Information for 12-GGACATGGCACC (Motif 14)

A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C G T A G T C A G T C
p-value:1e-4
log p-value:-9.592e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGACATGGCACC-----
ATAAATGACACCTATCA
A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

CREB3L1/MA0839.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGACATGGCACC
TGATGACGTGGCAN-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T

ATF6/MA1466.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGACATGGCACC
TGATGACGTGGCAG-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C
A G C T A C T G T C G A A G C T A C T G C T G A A G T C C T A G A G C T C T A G C A T G G T A C C T G A A T C G A C G T

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGACATGGCACC
-TACTTGGCAGA
A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

MTF1/MA0863.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGACATGGCACC
TTTGCACACGGCAC-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C A C G T

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGACATGGCACC--
TNCCATAGCAACNN
A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGACATGGCACC-
-----TGACACCT
A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

CREB3/MA0638.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGACATGGCACC
NGATGACGTGGCAN-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGACATGGCACC-
TTGCCATGGCAACN
A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGACATGGCACC
--NNTTGGCANN
A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C C G T A A G T C A G T C
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C