Information for 12-TTTAATTTTTCG (Motif 13)

A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A C G T A C G T A C G T A A C G T A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.871e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background161.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTAATTTTTCG
TTTAAT------
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTAATTTTTCG-
NNATNAATTGTTTNN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTTTTCG-
ATTNNTTAATTGCTTGT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PH0043.1_Hmx3/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTTTTCG-
ATTNNTTAATTGCTTGT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
G C T A G C A T A G C T A G T C C G A T G C A T G C A T C T G A C G T A C A G T G A C T C T A G G A T C A G C T A C G T T A C G A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTTAATTTTTCG---
NNTTTATTGTTCTNNN
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A

MNX1/MA0707.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTAATTTTTCG
TTTAATTANN--
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G
C A G T G C A T A C G T G C T A C T G A A C G T C A G T T C G A A T G C G A T C A C G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTTAATTTTTCG-
---CATTGTTCGG
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
A C G T A C G T A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTTTTCG-
ANNCATTAATTGCTNGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTTAATTTTTCG-
ANNCATTAATTGCTNGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTTAATTTTTCG--
CTATAATTGTTAGCG
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G