Information for 19-ATTTGTCCCTTA (Motif 20)

C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C T G A C T G A C T G C G T A A G T C C G T A C G T A C G T A A C G T
p-value:1e-4
log p-value:-9.369e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background159.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTCCCTTA
YCTTTGTTCC---
A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATTTGTCCCTTA------
-NTCNTCCCCTATNNGNN
C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGTCCCTTA-
GNNNATTAATCCCTNCN
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

PH0130.1_Otx2/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGTCCCTTA-
GANNATTAATCCCTNNN
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTCCCTTA
CCTTTGTTTT---
A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATTTGTCCCTTA---
NNANTTGACCCCTNNNN
A C G T A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ATTTGTCCCTTA
CCATTGTTNY---
A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:ATTTGTCCCTTA-
-----BCMATTAG
C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGTCCCTTA---
NNNNTGACCTTTNNNN
A C G T C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATTTGTCCCTTA-
-NNTGACCTTTNN
C G T A A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T C G T A A C G T
A C G T G A C T A G C T G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T C G T A G T C A