Information for 11-CGGCAGSKGT (Motif 23)

A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T
Reverse Opposite:
C T G A T G A C T G A C A T G C A G T C A G C T A C T G A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.273e+01
Information Content per bp:1.782
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif22.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets102.7 +/- 46.6bp
Average Position of motif in Background104.8 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGGCAGSKGT--
NNGGCAGGTGCNN
A C G T A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CGGCAGSKGT-
NNGCAGGTGNN
A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGGCAGSKGT
CACAGCAGGGG-
A C G T A C G T A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T

TCF3/MA0522.3/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGGCAGSKGT-
NNGCAGGTGNN
A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

ZFP57/MA1583.1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGGCAGSKGT
NNTGCGGCAANNN-
A C G T A C G T A C G T A C G T A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGCAGSKGT-
-RGCAGGTGYA
A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T A C G T
A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CGGCAGSKGT--
SDGCAGGTGCNS
A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ETV5/MA0765.2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGCAGSKGT
NCCGGAAGTNN-
A C G T A C G T A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T
T C A G T A G C T G A C T A C G T A C G T C G A C T G A T A C G A G C T T A C G T A C G A C G T

TCF4/MA0830.2/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGGCAGSKGT--
NNGGCAGGTGCNN
A C G T A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGGCAGSKGT-
SSRGCAGCTGCH
A C G T A G T C A C T G A C T G G T A C C T G A A C T G T A C G A C T G A C T G A G C T A C G T
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T