Information for 8-GCACTAGTTC (Motif 16)

A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.421e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets135.5 +/- 31.1bp
Average Position of motif in Background117.7 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCACTAGTTC-----
GAAAACTAGTTAACATC
A C G T A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCACTAGTTC----
GAGCCCTTGTCCCTAA
A C G T A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCACTAGTTC--
--ACTAGTTAAC
A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

NR1I3/MA1534.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCACTAGTTC--
---AAAGTTCAT
A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

HES6/MA1493.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCACTAGTTC
GGCACGTGTT-
A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACTAGTTC----
NNNCACTAATTANTNN
A C G T A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A T G C C T A G A T G C G A T C T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A T A C G A C G T T G C A T G A C

MYOD1/MA0499.2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCACTAGTTC-
CAGCACCTGTCCC
A C G T A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T
A T G C C G T A T A C G T A G C C T G A A T G C T A G C A G C T A T C G A G C T A G T C G T A C A G T C

SNAI3/MA1559.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCACTAGTTC
TGCACCTGTT-
A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C
A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T A C G T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCACTAGTTC-
-CACGTGTGCH
A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T
A C G T A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

PH0156.1_Rax/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCACTAGTTC------
TGCACTAATTAGCGCAC
A C G T A C T G A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T A C G A G T C T C G A A G T C G A C T T C G A C T G A A G C T A C G T C T G A T C A G A G T C A T C G T A G C T G C A G A T C