| p-value: | 1e-3 |
| log p-value: | -8.928e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 185.0 +/- 0.0bp |
| Average Position of motif in Background | 121.6 +/- 38.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATAAAGTACG NGYCATAAAWCH-- |
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ZKSCAN1/MA1585.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATAAAGTACG-- --ATAGTAGGTG |
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PH0116.1_Nkx2-9/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATAAAGTACG----- NATTTAAGTACTTNAAA |
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|
PH0117.1_Nkx3-1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATAAAGTACG----- NATTTAAGTACTTANNA |
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|
|
PH0112.1_Nkx2-3/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATAAAGTACG----- CNTTAAGTACTTAANG |
|
|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATAAAGTACG GTCATAAAAN--- |
|
|
|
PB0152.1_Nkx3-1_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATAAAGTACG----- ACTCCAAGTACTTGGAA |
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|
|
PB0094.1_Zfp128_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATAAAGTACG------- TTNGGGTACGCCNNANN |
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|
|
PB0106.1_Arid5a_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATAAAGTACG------ CATACAATACGAAATAA |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATAAAGTACG CYHATAAAAN--- |
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