Information for 2-ATCRCCTACC (Motif 10)

C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C
Reverse Opposite:
T C A G T C A G G C A T G T C A A C T G A T C G G A T C A T C G C G T A A C G T
p-value:1e-10
log p-value:-2.457e+01
Information Content per bp:1.755
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets104.2 +/- 56.3bp
Average Position of motif in Background118.4 +/- 50.9bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATCRCCTACC--
CAGCACCTGCCCC
A C G T C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCRCCTACC-
CGCACCTGCCG
C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

ZKSCAN5/MA1652.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCRCCTACC--
NNCTCACCTCCTNN
A C G T A C G T C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

TCF3/MA0522.3/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATCRCCTACC-
CGCACCTGCCC
C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCRCCTACC--
--CACCTACTAT
C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ATCRCCTACC-
NNGGCGACACCTCNNN
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCRCCTACC
TGACACCT---
A C G T C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

TCF4/MA0830.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATCRCCTACC--
CGGCACCTGCCCC
A C G T C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

MZF1/MA0056.2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ATCRCCTACC
CAAATCCCCACTT
A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C
G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATCRCCTACC-
SNGCACCTGCHS
A C G T C G T A C G A T A T G C C T A G T A G C A G T C A C G T C G T A A G T C A G T C A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C