Homer de novo Motif Results (motif_results/SRR15726019//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 933
Total background sequences = 41000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G A G T C C G T A T A G C G T C A A G T C C T G A C T A G A G T C C G T A C G A T T A G C 1e-16-3.849e+010.96%0.01%52.8bp (92.5bp)MTF1/MA0863.1/Jaspar(0.614)
More Information | Similar Motifs Found
motif file (matrix)
2 A C G T C T A G A C T G C A G T G T C A T C G A C A G T C A T G C A G T A C T G C A G T C T A G 1e-13-3.131e+013.73%0.74%45.9bp (64.6bp)PB0130.1_Gm397_2/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A G T C A G T C C G T A A G T C A C G T A C T G A C T G A G T C A G T C A C G T A G T C 1e-13-3.116e+010.85%0.01%51.8bp (49.2bp)SD0002.1_at_AC_acceptor/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
4 A C G T C G T A C G T A A G T C C G T A A C T G C G T A A C T G A G T C A C G T C G T A A C G T 1e-13-3.027e+010.64%0.00%19.1bp (0.0bp)PB0126.1_Gata5_2/Jaspar(0.578)
More Information | Similar Motifs Found
motif file (matrix)
5 A T G C G T C A A G C T A C G T A C T G A C T G A T C G C G T A A C T G A C T G C G T A A C T G 1e-12-2.778e+010.96%0.02%43.8bp (48.8bp)ZNF263/MA0528.2/Jaspar(0.818)
More Information | Similar Motifs Found
motif file (matrix)
6 * C A G T G C T A C G A T A C T G C A G T C A T G G C T A C G T A A C T G C G A T A T C G C G A T 1e-11-2.703e+012.24%0.29%44.3bp (59.3bp)NKX2-8/MA0673.1/Jaspar(0.614)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A C T G A C T G C T A G A G T C G A C T C G T A C G T A C G T A A C G T A C T G A C T G 1e-11-2.613e+010.64%0.01%59.4bp (36.2bp)PLAG1/MA0163.1/Jaspar(0.708)
More Information | Similar Motifs Found
motif file (matrix)
8 * C G T A A G T C A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A G T C 1e-9-2.108e+010.53%0.01%50.3bp (21.8bp)Stat2/MA1623.1/Jaspar(0.905)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C T G A C G T C G T A A C T G A C G T C G T A A C G T A G T C A G T C C G T A 1e-8-2.068e+010.64%0.01%48.0bp (25.2bp)PB0158.1_Rfx3_2/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C A T G C A C T G T C A G C T G A A G C T C T A G C G T A 1e-8-2.045e+014.05%1.28%52.1bp (57.0bp)SPDEF/MA0686.1/Jaspar(0.725)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A C T G A C T G A C T G A C G T C G T A A G T C A G T C C G T A C G T A 1e-8-2.027e+010.85%0.03%55.5bp (54.1bp)PB0059.1_Six6_1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
12 * C G T A A C T G C T G A C T A G T C A G A T G C C G T A A T G C C G T A A C T G 1e-8-2.007e+014.69%1.66%54.9bp (63.5bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.660)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G C T A C T G A C T G 1e-8-1.925e+011.39%0.15%69.0bp (52.5bp)NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer(0.839)
More Information | Similar Motifs Found
motif file (matrix)
14 * A C G T C T A G A C G T A G T C A G T C C G A T A C T G A G T C C T A G A T G C A C T G C G T A 1e-8-1.907e+010.53%0.01%32.1bp (52.0bp)PB0199.1_Zfp161_2/Jaspar(0.677)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C G T A C T G A C T G A G T C A G T C A C T G A C T G C G T A C G T A A G T C 1e-8-1.897e+010.43%0.00%20.2bp (5.2bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.747)
More Information | Similar Motifs Found
motif file (matrix)
16 * C G T A A C G T A C T G A C G T A G T C A C T G A C G T C G T A A C T G A C G T 1e-8-1.897e+010.43%0.00%50.3bp (19.6bp)PB0032.1_IRC900814_1/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C G T A C T G A C T G A C G T A C T G A G T C A C T G A C T G A C T G C G T A 1e-8-1.897e+010.43%0.00%52.2bp (8.5bp)Znf281/MA1630.1/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C A C G T A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T 1e-8-1.897e+010.43%0.00%10.9bp (21.2bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.651)
More Information | Similar Motifs Found
motif file (matrix)
19 * A G T C A C G T G T C A A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T C G T A 1e-8-1.897e+010.43%0.00%55.2bp (36.0bp)PB0091.1_Zbtb3_1/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
20 * C A G T T A C G C T G A A T C G G A C T A T G C C G T A T C A G A G C T A G T C C G A T A C T G 1e-8-1.859e+011.92%0.34%48.3bp (61.4bp)BATF/MA1634.1/Jaspar(0.701)
More Information | Similar Motifs Found
motif file (matrix)
21 * C A G T A G T C A G C T A G C T C A G T C G A T C G A T A G C T A G C T A T G C 1e-7-1.764e+0111.73%6.77%53.9bp (58.4bp)PB0192.1_Tcfap2e_2/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C G T A C T G A C G T C G T A A G T C A C T G A C T G C G T A A C T G C G T A 1e-7-1.622e+010.43%0.01%28.4bp (48.2bp)PB0139.1_Irf5_2/Jaspar(0.574)
More Information | Similar Motifs Found
motif file (matrix)
23 * A T C G C G T A A G T C A C T G A G C T A C T G A G T C A C T G 1e-6-1.603e+010.96%0.08%34.2bp (55.4bp)HIF1A/MA1106.1/Jaspar(0.868)
More Information | Similar Motifs Found
motif file (matrix)
24 * C A T G T G A C G T C A C A T G A G T C A C T G A G T C A G T C 1e-5-1.367e+012.56%0.80%54.2bp (50.4bp)POL006.1_BREu/Jaspar(0.686)
More Information | Similar Motifs Found
motif file (matrix)
25 * C G T A A C T G A C T G A G T C A C T G A G T C C G T A A C G T A C T G C T A G A C T G A G T C 1e-5-1.364e+010.32%0.00%53.2bp (0.0bp)NRF(NRF)/Promoter/Homer(0.778)
More Information | Similar Motifs Found
motif file (matrix)
26 * G A C T C T A G A C G T A T C G T G A C C G T A A C G T A C T G 1e-5-1.290e+0115.14%10.30%53.8bp (67.3bp)POU5F1/MA1115.1/Jaspar(0.701)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G A C G T C T A G A G T C A G T C 1e-5-1.260e+010.43%0.01%59.6bp (33.0bp)PB0130.1_Gm397_2/Jaspar(0.720)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C G T A C T G A C G T A T C G A C G T C T G A A C G T C G T A A C T G A C G T A G T C A C G T 1e-5-1.228e+010.53%0.02%32.4bp (52.1bp)Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer(0.599)
More Information | Similar Motifs Found
motif file (matrix)
29 * A C G T A C T G C G T A A C T G A C G T A G T C A G T C A C G T A C T G A C G T A C T G A C G T 1e-5-1.157e+010.32%0.01%46.6bp (34.1bp)NFE2/MA0841.1/Jaspar(0.632)
More Information | Similar Motifs Found
motif file (matrix)
30 * C G T A A C T G C G T A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T A G T C 1e-5-1.157e+010.32%0.00%51.0bp (15.4bp)PB0060.1_Smad3_1/Jaspar(0.599)
More Information | Similar Motifs Found
motif file (matrix)
31 * T G A C G A T C C T G A C G T A A G T C A T C G A T G C C G A T 1e-4-1.134e+013.52%1.52%56.8bp (55.6bp)PB0046.1_Mybl1_1/Jaspar(0.709)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G C T A G C T A C T G C G A T G C A T A C T G C T G A A C G T 1e-4-1.092e+019.17%5.74%52.8bp (57.8bp)MF0011.1_HMG_class/Jaspar(0.759)
More Information | Similar Motifs Found
motif file (matrix)
33 * C A T G A T G C G C A T G T C A G A C T A C T G A T C G C G T A 1e-3-8.851e+0016.52%12.41%55.9bp (59.8bp)RFX3/MA0798.2/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
34 * A G C T A G C T A C G T C G A T C T G A C T A G C T A G A C T G A C G T G C A T A C G T A C G T 1e-3-8.777e+000.64%0.08%55.3bp (53.1bp)PH0064.1_Hoxb9/Jaspar(0.601)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C G T A C T G A C T G A C G T A C T G A C G T A C T G A G T C A C G T A C T G 1e-3-8.695e+000.75%0.12%54.4bp (58.4bp)PB0208.1_Zscan4_2/Jaspar(0.734)
More Information | Similar Motifs Found
motif file (matrix)
36 * A C T G A C T G A C G T A C T G A C T G A G T C C G T A C T G A A G T C C G T A A T G C A G C T 1e-3-8.677e+001.71%0.58%63.2bp (57.8bp)HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer(0.715)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C G T C G A T A C G T G A C T A G T C A C G T C T A G C T A G 1e-3-7.816e+004.80%2.78%52.9bp (57.6bp)HOXC13/MA0907.1/Jaspar(0.715)
More Information | Similar Motifs Found
motif file (matrix)
38 * A G T C C G T A A G T C A G T C A G T C A C G T T A C G C G T A A C T G A C G T 1e-3-7.495e+000.75%0.15%54.3bp (62.5bp)PSE(SNAPc)/K562-mStart-Seq/Homer(0.661)
More Information | Similar Motifs Found
motif file (matrix)
39 * A G T C A G T C C G T A A C G T A C T G A C T G A C T G A G T C A C G T A T G C A C G T A C T G 1e-3-7.220e+000.21%0.01%48.9bp (43.9bp)HNF4A/MA0114.4/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
40 * A C G T A G T C A C G T A G T C A G T C A C G T A C T G A C G T C G T A A C G T C G T A G T A C 1e-3-7.220e+000.21%0.01%49.0bp (9.2bp)Foxo1/MA0480.1/Jaspar(0.680)
More Information | Similar Motifs Found
motif file (matrix)
41 * A G T C C G T A A C G T A C T G A C T G A G C T C G T A A C G T C G T A A G T C 1e-2-5.369e+000.32%0.04%52.3bp (61.4bp)Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer(0.614)
More Information | Similar Motifs Found
motif file (matrix)
42 * A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T 1e-1-3.953e+000.11%0.00%52.9bp (0.0bp)SD0001.1_at_AC_acceptor/Jaspar(0.690)
More Information | Similar Motifs Found
motif file (matrix)
43 * G T A C G C A T C T G A G C A T A T G C G C A T C G T A G C A T A G T C G C A T G T A C G T A C 1e41.000e+010.53%0.00%22.7bp (27.9bp)PRDM1/MA0508.3/Jaspar(0.608)
More Information | Similar Motifs Found
motif file (matrix)