Information for 6-CGGSAGGA (Motif 28)

A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A
Reverse Opposite:
A G C T G T A C A G T C A C G T A T G C A G T C A G T C C T A G
p-value:1e-5
log p-value:-1.279e+01
Information Content per bp:1.826
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif826.5
Percentage of Background Sequences with motif1.72%
Average Position of motif in Targets111.4 +/- 53.5bp
Average Position of motif in Background101.4 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF263/MA0528.2/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CGGSAGGA--
GGGGGGAGGAGG
A C G T A C G T A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CGGSAGGA---
-GGGAGGACNG
A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CGGSAGGA-
CACAGCAGGGG
A C G T A C G T A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CGGSAGGA----
ANTNCCGGGGGGAANTT
A C G T A C G T A C G T A C G T A C G T A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T A C G T A C G T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

MAZ/MA1522.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGSAGGA---
GGGGAGGGGNN
A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T A C G T
T C A G T C A G A T C G A C T G G T C A A T C G A T C G A T C G T A C G T A G C T A C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGGSAGGA-----
-NDCAGGAARTNN
A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ZNF148/MA1653.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGGSAGGA---
GGGGGAGGGGNG
A C G T A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T A C G T
T A C G T A C G C T A G T C A G T A C G G T C A A T C G A T C G T A C G T A C G T A C G T C A G

E2F6/MA0471.2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGGSAGGA---
GGGGGCGGGAAGG
A C G T A C G T A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T A C G T
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGGSAGGA--
CACAGCAGGGGG
A C G T A C G T A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic2/MA1629.1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGGSAGGA--
CTCACAGCAGGGGG
A C G T A C G T A C G T A C G T A G T C C T A G A C T G A T C G G T C A A C T G A C T G C T G A A C G T A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G