Information for 1-CCCATRTSNTRY (Motif 1)

A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
Reverse Opposite:
T C A G A G C T C G T A C G T A A T C G C T G A A G C T C G T A A C G T A C T G A C T G C T A G
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.733
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif774.1
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets71.0 +/- 55.3bp
Average Position of motif in Background99.9 +/- 81.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCCATRTSNTRY
ACCATATGTT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCATRTSNTRY
AACATATGTT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCATRTSNTRY
ANCATATGTT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T

TFAP4(var.2)/MA1570.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCATRTSNTRY
AACATATGTT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
T C G A G T C A A G T C C T G A A G C T T C G A A C G T A T C G C A G T A G C T A C G T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCATRTSNTRY
ACCATATGGT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T A C G T

ATOH7/MA1468.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCATRTSNTRY
GACATATGTT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCATRTSNTRY
ACCATATGTT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T A C G T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCATRTSNTRY
NGCCATATGGTG-
A C G T A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCATRTSNTRY
ACCATATGTT--
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCATRTSNTRY
-CCATATGT---
A G T C T G A C A G T C C G T A C G A T C T G A A G C T A T G C A C G T A C G T T C A G A G T C
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T