Information for 2-RTGTKCTCHTTG (Motif 5)

C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G
Reverse Opposite:
G T A C C G T A C T G A C G T A A C T G C T G A C T A G G T A C C G T A T G A C C G T A G A C T
p-value:1e-6
log p-value:-1.544e+01
Information Content per bp:1.699
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif538.5
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets103.9 +/- 61.8bp
Average Position of motif in Background98.5 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----RTGTKCTCHTTG-
CGAACAGTGCTCACTAT
A C G T A C G T A C G T A C G T C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:RTGTKCTCHTTG------
-TGTTCCCATTGTGTACT
C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RTGTKCTCHTTG-
-AGGVNCCTTTGT
C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--RTGTKCTCHTTG------
NNNTGAACTCNNTGACCTCN
A C G T A C G T C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RTGTKCTCHTTG---
---VCCTCTCTGDDY
C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

CTCFL/MA1102.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RTGTKCTCHTTG--
--GCGCCCCCTGNN
C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T A C G T
A C G T A C G T T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

SOX4/MA0867.2/Jaspar

Match Rank:7
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:RTGTKCTCHTTG---
-----NCCTTTGTTC
C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

ZNF274/MA1592.1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----RTGTKCTCHTTG
GGTATGAGTTCTCGCT-
A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G
C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:RTGTKCTCHTTG----
------CCWTTGTYYB
C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RTGTKCTCHTTG
CNGTCCTCCC--
C T G A C G A T A C T G C G A T A C T G A G T C A G C T T G A C G C A T A G C T A C G T A C T G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T