Information for 6-TATATATGTCTA (Motif 8)

A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A G T C C G T A A C G T C G T A A C G T C G T A A C G T C G T A
p-value:1e-3
log p-value:-9.152e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background146.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TATATATGTCTA
TCTTTATATATAAATA
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TATATATGTCTA--
TGTATATATATACC
A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PB0163.1_Six6_2/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TATATATGTCTA
ATGGGATATATCCGCCT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TATATATGTCTA
AACATATGTC--
A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TATATATGTCTA
AYATGYATATGCATR
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

NEUROG1/MA0623.2/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TATATATGTCTA
GACATATGTC--
A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TATATATGTCTA--
------TGTCTAGA
A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TATATATGTCTA--
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TATATATGTCTA--
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Twist2/MA0633.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TATATATGTCTA
NACATATGGN--
A C G T C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C G T C G T A
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T