| p-value: | 1e-3 |
| log p-value: | -9.045e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 195.0 +/- 0.0bp |
| Average Position of motif in Background | 38.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CTGCCCCACTTA- ----ACCACTTAA |
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PB0048.1_Nkx3-1_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTGCCCCACTTA----- CTTAACCACTTAAGGAT |
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RORC/MA1151.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTGCCCCACTTA- -TGACCTANTTAN |
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RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTGCCCCACTTA BTGACCTAVTTW |
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|
|
NKX2-3/MA0672.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CTGCCCCACTTA-- ----ACCACTTGAA |
|
|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTGCCCCACTTA----- CATAACCACTTAACAAC |
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|
|
Wt1/MA1627.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CTGCCCCACTTA CCCCTCCCCCACAC- |
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|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTGCCCCACTTA-- TTGACCTANTTATN |
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|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTGCCCCACTTA NNHYTGACCTAGWTT |
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|
ISL2/MA0914.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | CTGCCCCACTTA- -----GCACTTAA |
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