Information for 11-GGGGCCAATC (Motif 31)

A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.625e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif30.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets178.0 +/- 0.0bp
Average Position of motif in Background93.7 +/- 155.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GGGGCCAATC
CCCTGGGGCCAGG-
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGGGCCAATC--
--AGCCAATCGG
A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFYB/MA0502.2/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGGGCCAATC--
NTGGCCAATGAG
A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:forward strand
Alignment:GGGGCCAATC---
--AACCAATCAGA
A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYC/MA1644.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:forward strand
Alignment:GGGGCCAATC---
--AGCCAATCAGA
A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGGGCCAATC-
ACTAGCCAATCA
A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCAATC--
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PLAGL2/MA1548.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCCAATC
NGGGGGCCCN--
A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGGGCCAATC
HAWGRGGCCM---
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCAATC--
AGCTCGGCGCCAAAAGC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A G T C A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C