Information for 11-ACCAKGCACG (Motif 23)

C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G
Reverse Opposite:
G T A C A C T G C G A T A C T G A G T C G T A C C G A T A C T G A C T G A C G T
p-value:1e-6
log p-value:-1.519e+01
Information Content per bp:1.815
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets167.6 +/- 18.9bp
Average Position of motif in Background93.6 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACCAKGCACG---
AGACCACCCACGTCG
A C G T A C G T C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

GLI3/MA1491.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ACCAKGCACG---
AGACCACCCACGTCG
A C G T A C G T C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
T G C A A C T G T G C A T G A C T G A C G T C A T A G C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACCAKGCACG
GGACCACCCACG
A C G T A C G T C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

SOX18/MA1563.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACCAKGCACG
CACAATGC---
A C G T C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACCAKGCACG---
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACCAKGCACG---
-----GCACGTNC
C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACCAKGCACG--
AGCAACAGCCGCACC
A C G T A C G T A C G T C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ACCAKGCACG
AGACCACCCASR
A C G T A C G T C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACCAKGCACG
-CCAGACAG-
C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACCAKGCACG---
-----GCACGTAY
C G T A A G T C G T A C C G T A A C T G C T A G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T