Information for 8-ACAATGTATACT (Motif 9)

C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T
p-value:1e-3
log p-value:-8.994e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background147.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACAATGTATACT
AAACAATGGAA---
A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGTATACT
GACAATGNN----
A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

FOXA1/MA0148.4/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACAATGTATACT-
-NNATGTTTACAT
C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T G C T A G T A C G C T A C G A T C T A G G C A T C A G T A C G T C T G A G A T C G C T A G C A T

Dmrt1/MA1603.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACAATGTATACT
GATACAAAGTATC--
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ACAATGTATACT
AAACAATGGCA---
A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ACAATGTATACT
ACAAAGGNBCCT
C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

FOXP1/MA0481.3/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACAATGTATACT-
--NNTGTTTACNN
C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T C G A T C G T A C G A T T C A G C G A T C A G T C A G T G C T A G A T C G C T A G C A T

FOXA2/MA0047.3/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ACAATGTATACT-
--NNTGTTTACAT
C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T A C G T
A C G T A C G T G C A T C G T A C G A T T C A G C G A T C A G T C A G T C G T A G A T C G C T A G A C T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------ACAATGTATACT
TNNAGAACAATANATNN-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGTATACT
GHTACAWTGTADCHR
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T C G T A A G T C A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A