Information for 10-GCCGAGGT (Motif 33)

A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A G T C A C T G A C T G A G T C
p-value:1e-4
log p-value:-9.587e+00
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif50.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets86.3 +/- 44.0bp
Average Position of motif in Background99.0 +/- 42.5bp
Strand Bias (log2 ratio + to - strand density)3.4
Multiplicity (# of sites on avg that occur together)3.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCCGAGGT
NNTGCCAAGNN
A C G T A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCGAGGT-
TGCCCAGNHW
A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

NR5A1/MA1540.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCCGAGGT---
GTCAAGGTCAC
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCGAGGT---
-CAAAGGTCAG
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCGAGGT---
NBYCAAGGTCAC
A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCCGAGGT---
-TCAAGGTCAN
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

RUNX3/MA0684.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCGAGGT---
NNTTGAGGTTNN
A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGGT--
NRBCARRGGTCA
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGGT--
GKBCARAGGTCA
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCGAGGT--
BTCAAGGTCA
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A