Information for 13-GTCTCTCTCTCT (Motif 13)

T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T
Reverse Opposite:
C T G A T C A G T C G A T A C G C T G A A T C G C G T A T A C G G T C A T A C G C G T A A T G C
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.708
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.35%
Number of Background Sequences with motif670.9
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets102.0 +/- 51.2bp
Average Position of motif in Background103.0 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GTCTCTCTCTCT-
--TTCTTTCTCTT
T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T A C G T
A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTCTCTCTCTCT-
-ACTTTCACTTTC
T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Stat2/MA1623.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCTCTCT
NNTTTCTGTTTCT
A C G T T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T
C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTCTCTCTCTCT----
----VCCTCTCTGDDY
T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTCTCTCTCTCT
AGTTTCAGTTTC-
A C G T T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTCTCTCTCT-
ACCACTCTCGGTCAC
A C G T A C G T T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PBX3/MA1114.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTCTCTCT---
NNNCCTGTCACTCANNN
A C G T A C G T T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T A C G T A C G T A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PKNOX1/MA0782.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCTCTCT--
NNGCTGTCACTCANN
A C G T T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T A C G T A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCTCTCT
TGTCTGDCACCT-
A C G T T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTCTCTCT
ACTTTCACTTTC-
A C G T T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T