Information for 6-CCCCTAATACCT (Motif 6)

A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
Reverse Opposite:
C T G A A C T G A C T G C G A T C G T A A C G T A C G T C G T A A C T G A C T G C T A G A T C G
p-value:1e-13
log p-value:-3.213e+01
Information Content per bp:1.854
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets124.7 +/- 54.6bp
Average Position of motif in Background124.0 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC/MA0648.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCCCTAATACCT
--GCTAATCCCC
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCCCTAATACCT
--CCTAATCCGC
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

ZNF410/MA0752.1/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCCCTAATACCT
TCCATCCCATAATACTC
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

PITX2/MA1547.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCCCTAATACCT
---ATAATCCC-
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T

OTX2/MA0712.2/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCCCTAATACCT-
-NNCTAATCCCNN
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T A C G T
A C G T G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCCCTAATACCT
----TAATCCCN
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCCTAATACCT
--CTTAATCCC-
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CCCCTAATACCT
---CTAATCCC-
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCCTAATACCT
--NYTAATCCYB
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCCTAATACCT
---YTAATCCY-
A T G C A G T C A G T C G T A C A C G T G T C A C G T A A C G T C G T A A G T C A G T C A G C T
A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T