Information for 24-CCCAACGCTA (Motif 35)

A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-7.252e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background48.9 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCCAACGCTA
CCAAGCCCAACCAG-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G A C G T

SOX18/MA1563.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCAACGCTA
CACAATGC--
A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T

KLF4/MA0039.4/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCAACGCTA
CGCCCCACCCCC
A C G T A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCAACGCTA--
CTATCCCCGCCCTATT
A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A A C G T A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T

EGR2/MA0472.2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCAACGCTA
ACGCCCACGCA-
A C G T A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCCAACGCTA
NTCAAGGTCA
A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCCAACGCTA
BTCAAGGTCA
A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CCCAACGCTA
AGCCTCAGGCA-
A C G T A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CCCAACGCTA
-----NGCTN
A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------CCCAACGCTA--
TTTCGAGCGGAACGGTCGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A C G T A A G T C A C T G A G T C A C G T C G T A A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T