Information for 16-CKAACTKAGT (Motif 27)

A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T G T A C C G T A A C T G A C G T A C G T G T C A A C T G
p-value:1e-5
log p-value:-1.360e+01
Information Content per bp:1.882
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif59.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets90.7 +/- 53.9bp
Average Position of motif in Background95.4 +/- 51.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CKAACTKAGT
ATGAACTTT--
A C G T A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CKAACTKAGT
GTTAACTAGN-
A C G T A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------CKAACTKAGT-
ACTTAGTTAACTAAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CKAACTKAGT-
-TAATTGATTA
A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T A C G T
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CKAACTKAGT-
CCTTAGTTAACTAAAAT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

MYB/MA0100.3/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CKAACTKAGT
ACCAACTGTC-
A C G T A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CKAACTKAGT--
RGMCCTACTRTGTGC
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C

MSANTD3/MA1523.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:CKAACTKAGT----
----GTGAGTGNAC
A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CKAACTKAGT
--AACCGANA
A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CKAACTKAGT--
NNNNCAACCTTCGNGA
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C A C G T C A T G G T C A A C T G A C G T A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A