Information for 24-ATGGTAAGGAAC (Motif 30)

C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A G T C A G T C A C G T A C G T C G T A A G T C A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.231e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets185.0 +/- 0.0bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGGTAAGGAAC
CAGGTAAGTAT-
C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGGTAAGGAAC
TATGCWAATBAV-
A C G T C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ATGGTAAGGAAC
--GGYAATGAAA
C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
A C G T A C G T C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGGTAAGGAAC
WATGCAAATGAG-
A C G T C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T

GATA4/MA0482.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTAAGGAAC
NNAGATAAGGNN-
A C G T C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATGGTAAGGAAC
NATGGAAAAN---
A C G T C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ATGGTAAGGAAC
CCTGGGAAAG---
A C G T C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATGGTAAGGAAC-
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

FOXN3/MA1489.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATGGTAAGGAAC
---GTAAACAA-
C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C
A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A C G T A A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATGGTAAGGAAC-
TAAACTGATAAGAAGAT
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C T G A C T G C G T A C G T A A G T C A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T