Information for 13-AGAACAAGAGTA (Motif 19)

C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C A C G T A C G T A C T G A C G T A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.900e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background193.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGAACAAGAGTA
AGAACAATGG--
C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGAACAAGAGTA
AAAACAATAG--
C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AGAACAAGAGTA-----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGAACAAGAGTA-
TTTAGAACAATAAAAT
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAAGAGTA
NNTNANAACAATTNNA
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGAACAAGAGTA
NTTNAGAACAATTA--
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGAACAAGAGTA-
TTAAGAACAATAAATT
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGAACAAGAGTA
-GAACAATGG--
C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGAACAAGAGTA
-GAACAATGGN-
C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAACAAGAGTA
RNAACAATGG--
C G T A A C T G C G T A C G T A A G T C C G T A C G T A A C T G C G T A A C T G A C G T C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T