Information for 12-TTCGGTTAAAGA (Motif 12)

A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C G T A C G T C G T A C G T A A G T C A G T C A C T G C G T A C G T A
p-value:1e-3
log p-value:-9.148e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTCGGTTAAAGA
TGTCGGTT-----
A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTCGGTTAAAGA---
NTTTTAGTTAACNNAGN
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTCGGTTAAAGA---
NNNTTAGTTAACTNANN
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTCGGTTAAAGA---
---GGTTAGAGACCT
A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCGGTTAAAGA
TTGCGGTTT----
A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGGTTAAAGA
NTGGTTTCGGTTNNN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T A C G T A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCGGTTAAAGA-
-ACCGTTAACGGT
A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T
A C G T C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCGGTTAAAGA----
---GGTTAAACATTAA
A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

IRF5/MA1420.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTCGGTTAAAGA
AGTTTCGGTTTCGG-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A
T C G A A C T G C A G T G C A T A C G T A G T C C T A G C T A G G A C T C G A T G C A T G T A C T C A G C T A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCGGTTAAAGA-----
AGCTGTTAACTAGCCGT
A C G T A C G T A G T C A C T G A C T G A C G T A C G T C G T A C G T A C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T