Information for 12-CCCTCAGTATGA (Motif 16)

A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A
Reverse Opposite:
A C G T A G T C C G T A C G A T C G T A A G T C A C G T A C T G C G T A A C T G A C T G C T A G
p-value:1e-6
log p-value:-1.579e+01
Information Content per bp:1.898
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 27.3bp
Average Position of motif in Background175.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0152.1_Pou6f1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCAGTATGA--
GCAACCTCATTATNNNN
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCCTCAGTATGA
-DCTCAGCAGG-
A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCTCAGTATGA
NNCTCATTAT--
A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGTATGA--
CCACACAGCAGGAGA
A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGTATGA--
CCACACAGCAGGAGA
A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGTATGA--
GAGCACAGCAGGACA
A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCCTCAGTATGA--
NNNACCTCATTATCNTN
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

TFAP2A/MA0003.4/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCTCAGTATGA
ATTGCCTCAGGCCA-
A C G T A C G T A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A A C G T

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCCTCAGTATGA---
CTTTCANTATGACTV
A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A A C G T A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCTCAGTATGA--
GCACAYAGTAGGKCY
A C G T A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G A T C G T A A C G T A C T G T C G A A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C