Information for 2-GGTTCAAGTGTG (Motif 2)

A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G
Reverse Opposite:
G T A C G C T A A G T C C G T A A G T C A G C T A G C T A C T G G T C A C G T A A G T C G T A C
p-value:1e-5
log p-value:-1.355e+01
Information Content per bp:1.713
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif693.0
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets138.0 +/- 31.4bp
Average Position of motif in Background96.9 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGTTCAAGTGTG
--NTCAAGTGG-
A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGTTCAAGTGTG
--NTCAAGTGGN
A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

ZBTB12/MA1649.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGTTCAAGTGTG
NNGTTCCAGNN--
A C G T A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G
T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTTCAAGTGTG
--CTYRAGTGSY
A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGTTCAAGTGTG-
-GNMCAGGTGTGC
A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G A C G T
A C G T C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGTTCAAGTGTG
--BTBRAGTGSN
A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCAAGTGTG---
NANTTTCAAGTGGTTAN
A C G T A C G T A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

ZBTB6/MA1581.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCAAGTGTG
NNGGCTCAAGGNN-
A C G T A C G T A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G
A T G C A C T G C T A G C A T G A G T C C A G T A T G C G T C A T C G A C A T G A T C G T C G A G T A C A C G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGTTCAAGTGTG--
NNATCAGGTGATNN
A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G A C G T A C G T
C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGTTCAAGTGTG-
---TTRAGTGSYK
A C T G C T A G C G A T A C G T G T A C T C G A C T G A A C T G G C A T C T A G C G A T A C T G A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T