Information for 20-CCTACAATGAAG (Motif 29)

A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.272e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCTACAATGAAG
-AAACAATGGAA
A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCTACAATGAAG
--GACAATGNN-
A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCTACAATGAAG--
TAATTCAATGAAGTG
A C G T A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCTACAATGAAG
-AAACAATGGCA
A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTACAATGAAG
CACCTACTAT----
A C G T A C G T A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTACAATGAAG
VRRACAAWGG--
A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCTACAATGAAG
ATTTGCATACAATGG--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTACAATGAAG
CCGAACAATG---
A C G T A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCTACAATGAAG--
TACCCACAATGCATTG
A C G T A C G T A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTACAATGAAG
BMRVACAAWGGV-
A C G T A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C G T A C T G C G T A C G T A A C T G
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T