Information for 10-AGCATCTGCG (Motif 23)

C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C T G C G T A A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.723e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background118.9 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:AGCATCTGCG
CGCAGCTGCG
C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

HAND2/MA1638.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCATCTGCG
NNCATCTGNN
C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

Ptf1a/MA1618.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AGCATCTGCG-
NNAACATCTGTNN
A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T
C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGCATCTGCG--
NVCAGCTGBBNN
C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

ASCL1/MA1100.2/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGCATCTGCG
NGCAGCTGCN
C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C

NHLH2/MA1529.1/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AGCATCTGCG----
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGCATCTGCG
AGCAGCTGCT
C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AGCATCTGCG--
DGCAGCTGCYSS
C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGCATCTGCG----
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AGCATCTGCG
AACATCTGGA
C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C T G A G T C A C T G
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A