Information for 5-GGGCCAAAAGTT (Motif 7)

A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A G T C
p-value:1e-4
log p-value:-9.565e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background109.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAAAGTT---
AAGGTCAAAAGGTCAA
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGCCAAAAGTT--
AAAGGTCAAAAGGTCA
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

E2F4/MA0470.2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCCAAAAGTT
NAATGGCGCCAAAA---
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T
C G T A C G T A C G T A C A G T T A C G A T C G G T A C C A T G A T G C A T G C G T C A G T C A G C T A G C T A A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCAAAAGTT-
TGGGGCAAAGGTCA
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAAAGTT-
GGGGTCAAAGGTCA
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAAAGTT--
GGGTCCAAAGGTCAC
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAAAGTT--
GAGGTCAAAAGGTCA
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAAAGTT
CGTGCCAAG----
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAAAGTT-
GGGGTCAAAGGTCA
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGGCCAAAAGTT--
GAGGTCAAAGGTCAC
A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C