| p-value: | 1e-15 |
| log p-value: | -3.505e+01 |
| Information Content per bp: | 1.906 |
| Number of Target Sequences with motif | 8.0 |
| Percentage of Target Sequences with motif | 1.05% |
| Number of Background Sequences with motif | 3.8 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 123.9 +/- 44.8bp |
| Average Position of motif in Background | 156.3 +/- 12.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.7 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.78 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GRATMTCCTTAG AAGATATCCTT-- |
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EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer
| Match Rank: | 2 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GRATMTCCTTAG --ATTTCCTGTN |
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|
|
RELA/MA0107.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GRATMTCCTTAG GGGAATTTCC---- |
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|
|
HLTF/MA0109.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GRATMTCCTTAG-- ----AACCTTATAT |
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|
|
HOXB4/MA1499.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GRATMTCCTTAG ----ATCATTAG |
|
|
|
POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.56 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GRATMTCCTTAG --NNCTCATTAT |
|
|
|
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GRATMTCCTTAG GGGAATTTCC---- |
|
|
|
HOXA4/MA1496.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GRATMTCCTTAG ----GTCATTAG |
|
|
|
HOXD4/MA1507.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GRATMTCCTTAG ----ATCATTAG |
|
|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GRATMTCCTTAG ----GTCATTAA |
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