Information for 2-GATGAAWGMTKK (Motif 2)

A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
Reverse Opposite:
G T C A G T C A C G T A A C T G A G T C C G A T A C G T A C G T A G T C C G T A C G A T A G T C
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.869
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif49.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets172.8 +/- 5.4bp
Average Position of motif in Background87.2 +/- 75.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GATGAAWGMTKK
NNTNTCATGAATGT---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATGAAWGMTKK
GAATGAATGAATG
A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GATGAAWGMTKK-
NTTNTATGAATGTGNNC
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATGAAWGMTKK-
-ATGATKGATGRC
A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GATGAAWGMTKK--
ACTATGAATGAATGAT
A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATGAAWGMTKK
ATGATGCAAT----
A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T A C G T A C G T A C G T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GATGAAWGMTKK
ASATCAAAGG---
A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GATGAAWGMTKK
--TGATKGATGR
A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GATGAAWGMTKK
GGTGYTGACAGS---
A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GATGAAWGMTKK
GGYAATGAAA-----
A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A C G T A A C T G G T A C A C G T A C G T A C G T
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T