Information for 2-CTCTRWCGGG (Motif 8)

T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G
Reverse Opposite:
A T G C T A G C T A G C T A C G G C T A A G C T C G T A T A C G T G C A A T C G
p-value:1e-5
log p-value:-1.361e+01
Information Content per bp:1.567
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif366.0
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets117.8 +/- 60.2bp
Average Position of motif in Background106.2 +/- 69.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTCTRWCGGG
VCCTCTCTGDDY--
A C G T A C G T A C G T A C G T T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTCTRWCGGG
TWGTCTGV----
A C G T A C G T T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTCTRWCGGG
VBSYGTCTGG----
A C G T A C G T A C G T A C G T T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CTCTRWCGGG
AGGTCTCTAACC--
A C G T A C G T A C G T A C G T T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTCTRWCGGG-----
CTCTCGCGAGATCTG
T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G A C G T A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

ZSCAN29/MA1602.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CTCTRWCGGG-
CGTCTACACGGG
A C G T T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

Smad4/MA1153.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTCTRWCGGG
TGTCTAGA---
A C G T T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCTRWCGGG
CTGTCTGG----
A C G T A C G T T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCTRWCGGG---
-TCTCGCGAGAAT
T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G A C G T A C G T A C G T
A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

ZBED1/MA0749.1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CTCTRWCGGG-----
--CTATCGCGACATA
T A G C A C G T A T G C C G A T T C G A C G A T A T G C A T C G A T C G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A