Information for 11-CGTTTTGACC (Motif 32)

A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A G T C C G T A C G T A C G T A C G T A A G T C A C T G
p-value:1e-3
log p-value:-7.997e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets155.0 +/- 0.0bp
Average Position of motif in Background80.1 +/- 113.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CGTTTTGACC--
TTGACCTTTTGACCTT
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTTGACC---
TGACCTTTTGACCTTT
A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTTGACC----
WCATTTTGKCCTCYT
A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CGTTTTGACC--
TGACCTTTTGACCTC
A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CGTTTTGACC-
-----TGACCT
A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

RARA/MA0729.1/Jaspar

Match Rank:6
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------CGTTTTGACC--
CATTGACCTTTTGACCTC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

NR2C1/MA1535.1/Jaspar

Match Rank:7
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:CGTTTTGACC---
----NTGACCTCN
A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CGTTTTGACC--
----NTGACCTN
A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CGTTTTGACC---
-----TGACCYCT
A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CGTTTTGACC-------
-----TGACCYYTGVYN
A G T C A C T G A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C