Information for 18-GTTAATAAGC (Motif 35)

A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G T A A C G T A C G T C G T A C G T A A G T C
p-value:1e-2
log p-value:-6.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets154.0 +/- 0.0bp
Average Position of motif in Background100.2 +/- 85.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTAATAAGC-
-NTAATGAGCT
A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GTTAATAAGC----
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

LBX1/MA0618.1/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GTTAATAAGC
-TTAATTAG-
A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GTTAATAAGC----
AGGTTAATTAGCTGAT
A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

NKX6-1/MA0674.1/Jaspar

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTTAATAAGC
-TTAATTAN-
A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C
A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTTAATAAGC
GNTAATTAGN
A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C
A T C G C A G T G A C T T G C A C T G A G C A T A C G T C T G A A T C G A G T C

PH0060.1_Hoxb5/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GTTAATAAGC----
ACGGTAATTAGCTCAT
A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T

PH0174.1_Vax1/Jaspar

Match Rank:8
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTTAATAAGC----
ACGTTAATTAACCCAG
A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G

NOTO/MA0710.1/Jaspar

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTTAATAAGC
NNTAATTAGN
A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C

PB0031.1_Hoxa3_1/Jaspar

Match Rank:10
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTTAATAAGC----
GTTAATTANCTCNN
A C T G A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T C A G A G C T A G C T G T C A C G T A A C G T A C G T C T G A T A G C G A T C C G A T T A G C T G A C G C T A