Information for 11-GTCTCACAACCC (Motif 13)

A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T A C T G A C G T A C T G C G T A A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets124.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCTCACAACCC
CTGTCTGTCACCT-
A C G T A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCACAACCC
TGTCTGDCACCT-
A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCTCACAACCC--
NNCTCACCTCCTNN
A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

ZNF282/MA1154.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTCACAACCC---
CTTTCCCACAACACGAC
A C G T A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A T G C G C A T C G A T C A G T A T G C A G T C A T G C G T C A G A T C C G T A C G T A A T G C G T C A A G T C C A T G C T G A A T G C

TBX18/MA1565.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTCTCACAACCC-
-NTTCACACCTCC
A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T
A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTCTCACAACCC
---TCACACCT-
A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C
A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCACAACCC---
NNTTTTCACACCTTNNN
A C G T A C G T A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCTCACAACCC---
ATGTCACAACAACAC
A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCTCACAACCC
---TCACACCT-
A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTCTCACAACCC
---TCACACCT-
A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A C G T A A G T C A G T C A G T C
A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T