Information for 5-GGTATCCAAT (Motif 26)

A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-7.448e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background58.7 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GGTATCCAAT---
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GGTATCCAAT-------
NNTNGNNGTAACCAAGNNNNAGN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCAAT--
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTATCCAAT--
ACCCGTATCAAATTT
A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PH0165.1_Six6_1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCAAT--
AATAGGGTATCAATTAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCAAT--
AATAGGGTATCAATATT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGTATCCAAT--
ACTAGCCAATCA
A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCAAT--
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGTATCCAAT---
---AGCCAATCGG
A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGTATCCAAT--
GATGGGGTATCATTTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T