| p-value: | 1e-3 |
| log p-value: | -8.541e+00 |
| Information Content per bp: | 1.973 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 0.21% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 112.5 +/- 53.8bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 6.50 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 1 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CCTGCATACACC -ATGMATATDC- |
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GCM2/MA0767.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCTGCATACACC TACCCGCATN---- |
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|
PB0130.1_Gm397_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCTGCATACACC--- AGCGGCACACACGCAA |
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|
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CCTGCATACACC-- ATTTGCATACAATGG |
|
|
|
PB0158.1_Rfx3_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------CCTGCATACACC---- ACTGACCCTTGGTTACCACAAAG |
|
|
|
PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CCTGCATACACC TACCCTAGTTACCGA |
|
|
|
PB0024.1_Gcm1_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CCTGCATACACC TCGTACCCGCATCATT- |
|
|
|
GCM1/MA0646.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CCTGCATACACC GTACCCGCATN---- |
|
|
|
ZSCAN29/MA1602.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CCTGCATACACC NCNGTGTAGACG |
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|
|
TCF12(var.2)/MA1648.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CCTGCATACACC CGCACCTGCCG----- |
|
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