Information for 3-KKAAARGRTTGC (Motif 4)

A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
Reverse Opposite:
A C T G A G T C C G T A C T G A G A C T A G T C A G T C A G C T A G C T A C G T T G C A G T A C
p-value:1e-7
log p-value:-1.704e+01
Information Content per bp:1.790
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif559.4
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets117.8 +/- 48.4bp
Average Position of motif in Background95.9 +/- 82.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:KKAAARGRTTGC
----NNNANTGA
A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-KKAAARGRTTGC
GCTAAACGGT---
A C G T A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-KKAAARGRTTGC--
TAYAAAAGBWGGCAG
A C G T A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C A C G T A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------KKAAARGRTTGC
TTCAAAWTAAAAGTC---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---KKAAARGRTTGC
NMMNBAAAGGGTTAA
A C G T A C G T A C G T A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---KKAAARGRTTGC
ASATCAAAGG-----
A C G T A C G T A C G T A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:KKAAARGRTTGC
----AAGCTTG-
A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T

ZNF652/MA1657.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KKAAARGRTTGC-
-GAAAGAGTTAAA
A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C A C G T
A C G T A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----KKAAARGRTTGC
GNCTATAAAAGG----
A C G T A C G T A C G T A C G T A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:KKAAARGRTTGC
NNATAAGGNN--
A C T G A C G T C G T A C T G A C T G A C T A G A C T G C T G A A G C T A C G T A C T G G T A C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T