| p-value: | 1e-4 |
| log p-value: | -1.059e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 130.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AATGAAAGATGC GGYAATGAAA----- |
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Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AATGAAAGATGC GGCMATGAAA----- |
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Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AATGAAAGATGC HDGYAATGAAAN---- |
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PB0028.1_Hbp1_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------AATGAAAGATGC ACTATGAATGAATGAT-- |
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|
PH0169.1_Tgif1/Jaspar
| Match Rank: | 5 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AATGAAAGATGC-- GATATTGACAGCTGCGT |
|
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|
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATGAAAGATGC---- -ATGCATWATGCATRW |
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|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATGAAAGATGC- -ATGATKGATGRC |
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|
|
POU4F3/MA0791.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGAAAGATGC-- CTCATTAATTATGCAT |
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|
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AATGAAAGATGC---- -ATGAATWATTCATGA |
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PH0141.1_Pknox2/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGAAAGATGC-- NNATTGACAGGTGCTT |
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