Information for 1-GCGTATGG (Motif 35)

A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C
p-value:1e-2
log p-value:-6.536e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif198.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background93.6 +/- 160.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD2/MA0668.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGG-
ACCATATGGC
A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

BHLHE22/MA0818.1/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGG-
ANCATATGGT
A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGG-
ANCATATGGT
A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

PB0143.1_Klf7_2/Jaspar

Match Rank:4
Score:0.68
Offset:-7
Orientation:reverse strand
Alignment:-------GCGTATGG--
NNNTNGGGCGTATNNTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCGTATGG
ACATATGG
A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCGTATGG--
NGCCATATGGTG
A C G T A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCGTATGG-
ACCATATGGT
A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T

ATOH7/MA1468.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCGTATGG-
AACATATGTC
A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T
T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGTATGG
VBSYGTCTGG
A C G T A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGTATGG-
AACATATGTT
A C G T A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G A C G T
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T