Information for 4-GCAATTGC (Motif 38)

A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
p-value:1e-2
log p-value:-5.177e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif170.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets10.5 +/- 0.5bp
Average Position of motif in Background84.3 +/- 93.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0007.1_Barx1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GCAATTGC---
ATNNACTAATTACTTT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T
C G T A G C A T C A G T G A T C T C G A T A G C G A C T T G C A G T C A A C G T A C G T C T G A A T G C A G C T C A G T C A G T

PH0024.1_Dlx5/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GCAATTGC-----
GGGGTAATTAGCTCTG
A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

PH0009.1_Bsx/Jaspar

Match Rank:3
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----GCAATTGC---
NTNAGNTAATTACCTN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

HOXC8/MA1505.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCAATTGC
GTAATTAC
A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
C A T G A G C T G T C A G T C A A C G T C A G T C T G A G T A C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCAATTGC
AGATGCAATCCC
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

PH0061.1_Hoxb6/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCAATTGC---
TATTGGTAATTACCTT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCAATTGC-
-TAATTASS
A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T
A C G T G A C T T G C A G C T A G C A T A C G T T C G A A T G C T A C G

MYB/MA0100.3/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAATTGC-
ACCAACTGTC
A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C A C G T
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

HOXD8/MA0910.2/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCAATTGC
GCAATTAC
A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C

DLX5/MA1476.1/Jaspar

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GCAATTGC
GCAATTAC
A C T G A G T C C G T A C G T A A C G T A C G T A C T G A G T C
T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C