Information for 25-GTCACATTCATA (Motif 27)

A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G C G T A C G T A A C G T A C T G A C G T A C T G C G T A A G T C
p-value:1e-4
log p-value:-9.897e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTCACATTCATA----
GACCACATTCATACAAT
A C G T A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GTCACATTCATA-----
---ACATTCATGACACG
A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

TEAD2/MA1121.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTCACATTCATA--
-TCACATTCCAGCC
A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C G T
A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

DMRTA2/MA1478.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTCACATTCATA
AATTGTTACATT----
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTCACATTCATA
-GHATATKCAT-
A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCACATTCATA
-CYRCATTCCA-
A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A
A C G T T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A A C G T

TEAD4/MA0809.2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GTCACATTCATA-
-CCACATTCCAGG
A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A A C G T
A C G T G A T C G A T C C T G A T G A C G C T A A G C T C G A T A G T C G A T C G C T A C T A G T A C G

TEAD3/MA0808.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTCACATTCATA
---ACATTCCA-
A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A
A C G T A C G T A C G T C T G A T G A C C G T A A C G T C G A T A G T C A G T C C G T A A C G T

USF2/MA0526.3/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTCACATTCATA
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

USF1/MA0093.3/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTCACATTCATA
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A A C G T A C G T A G T C C G T A A C G T C G T A
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A