Information for 15-CCATTGMGCC (Motif 20)

A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
Reverse Opposite:
A C T G C T A G A G T C C A G T T G A C G C T A C G T A A C G T A C T G C T A G
p-value:1e-4
log p-value:-1.135e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif44.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets84.2 +/- 37.7bp
Average Position of motif in Background81.9 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.71
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB6/MA1581.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CCATTGMGCC--
GTCCTTGAGCCCG
A C G T A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGMGCC
NNCCATTGTNN-
A C G T A C G T A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCATTGMGCC
GRTGMTRGAGCC
A C G T A C G T A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCATTGMGCC
NNCCATTGTNN-
A C G T A C G T A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCATTGMGCC
CCATTGTTYB
A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX18/MA1563.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCATTGMGCC
GCATTGTN--
A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCATTGMGCC
CCATTGTTC-
A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCATTGMGCC--
CCATTGTTYYBB
A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C A C G T A C G T
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCATTGMGCC--
NNNCCATTGTGTNAN
A C G T A C G T A C G T A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCATTGMGCC
NCCATTGTTC-
A C G T A G T C G T A C C G T A A C G T C G A T A C T G G T C A A C T G A G T C A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T