Information for 24-AGATGGACAGGC (Motif 27)

C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G A C G T A G T C A G T C C G T A A C G T A G T C A C G T
p-value:1e-3
log p-value:-8.553e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets192.0 +/- 0.0bp
Average Position of motif in Background105.5 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGATGGACAGGC
TGAGTGACAGSC
C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGATGGACAGGC----
NNATTGACAGGTGCTT
C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGATGGACAGGC
NTGATTGACAGN-
A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

PBX3/MA1114.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGATGGACAGGC--
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGATGGACAGGC
GGAACAGATGGCA----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATGGACAGGC
BTGABTGACAGS-
A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGATGGACAGGC
---TTGACAGC-
C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

NEUROD1/MA1109.1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGATGGACAGGC
GGACAGATGGCAG---
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGATGGACAGGC
AAGGCCAGATGGTCCGG-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGATGGACAGGC-
TTTGAGTGACAGCTA
A C G T A C G T C G T A A C T G C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C T G A G T C A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A