Information for 10-CGTCAAACTC (Motif 20)

A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C G T A C G T A C T G C G T A A G T C A C T G
p-value:1e-3
log p-value:-8.288e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background89.8 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGTCAAACTC
ACGTCA-----
A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGTCAAACTC
GGTCGTAAAATT-
A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGTCAAACTC
AGTCGTAAAAA--
A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTCAAACTC
TACGTCAT----
A C G T A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGTCAAACTC----
-TCCAAAGTCCAGA
A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CGTCAAACTC----
-TCCAAAGTCCAAA
A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HOXC9/MA0485.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGTCAAACTC
GTCGTAAAAT--
A C G T A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T A C G T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTCAAACTC
GGTCGTAAAAT--
A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTCAAACTC
GGTCGTAAAAA--
A C G T A C G T A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGTCAAACTC
GTCGTAAAAT--
A C G T A C G T A G T C A C T G A C G T A G T C C G T A C G T A C G T A A G T C A C G T A G T C
T C A G A G C T A G T C T C A G A C G T G C T A C G T A G T C A G C T A G A C T A C G T A C G T