| p-value: | 1e-4 |
| log p-value: | -9.625e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 177.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | AGAGAGCCATCA-- ----GGCCATTAAC |
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GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGAGAGCCATCA-- NAGATWNBNATCTNN |
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ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGAGAGCCATCA-------- AADGAGVCANYASTACAGNC |
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|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AGAGAGCCATCA- -GYCATCMATCAT |
|
|
|
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | AGAGAGCCATCA-- ----RGCAATNAAA |
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|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AGAGAGCCATCA------- --TCACCCATCAATAAACA |
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|
ZFP42/MA1651.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AGAGAGCCATCA------ NNNNGGCAGCCATTTTGNNNN |
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|
|
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AGAGAGCCATCA RHHCAGAGAGGB---- |
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|
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AGAGAGCCATCA------ --AGAGCCATAAAATTCG |
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HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 10 |
| Score: | 0.54 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAGAGCCATCA --YCATCMATCA |
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