Information for 11-CGSMGMCC (Motif 29)

A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C
Reverse Opposite:
C T A G T C A G A C T G A G T C A C T G A T C G A G T C A T C G
p-value:1e-3
log p-value:-8.895e+00
Information Content per bp:1.692
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif466.4
Percentage of Background Sequences with motif0.97%
Average Position of motif in Targets107.9 +/- 57.1bp
Average Position of motif in Background99.3 +/- 48.8bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGSMGMCC
CGGAGC--
A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CGSMGMCC-
TNAACGACGTCGNCCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGSMGMCC--
GCCGCGCAGTGCGT
A C G T A C G T A C G T A C G T A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGSMGMCC----
TTGGGGGCGCCCCTAG
A C G T A C G T A C G T A C G T A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGSMGMCC
NGAAGC--
A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CGSMGMCC--
TACGCCCCGCCACTCTG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGSMGMCC-
-GGCGCGCT
A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------CGSMGMCC-
NNNNTTGGCGCCGANNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

KLF15/MA1513.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGSMGMCC--
GCCCCGCCCCC
A C G T A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T A C G T
A T C G A T G C T A G C T A G C A T G C A C T G G A T C T A G C T A G C A T G C A T G C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGSMGMCC---
GCTCCGCCCMCY
A C G T A T G C A C T G T A G C G T A C C T A G T G A C A G T C A G T C A C G T A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T