Information for 17-GAGGACACTCTT (Motif 19)

A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C T G A C G T A C T G A C G T A G T C A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.614e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets192.0 +/- 0.0bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAGGACACTCTT
TRAGGTCA-----
A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGGACACTCTT
AAGGTCAC----
A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

PAX5/MA0014.3/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGGACACTCTT
NNGGTCACGCTC
A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C

MSANTD3/MA1523.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGGACACTCTT
--GTACACTCAC
A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGGACACTCTT-----
TACGAGACTCCTCTAAC
A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGACACTCTT
AGRGGTCA-----
A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GAGGACACTCTT
NBYCAAGGTCAC----
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGGACACTCTT
GGGAGGACNG----
A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGACACTCTT---
VAGRACAKWCTGTYC
A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GAGGACACTCTT
NRBCARRGGTCA-----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T