Information for 3-ACGAAGGTAC (Motif 8)

C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A G T C A C G T A C G T A G T C A C T G A C G T
p-value:1e-3
log p-value:-8.291e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background79.6 +/- 55.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ACGAAGGTAC
AGAAACGAAAGT--
A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACGAAGGTAC
AAAACAAAGG---
A C G T A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACGAAGGTAC
-NGAAGC---
C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACGAAGGTAC
AAAACAAAGAA--
A C G T A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACGAAGGTAC
ACAGGAAGTG--
A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACGAAGGTAC
GGAACAAAGR---
A C G T A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACGAAGGTAC
RACAAWGG---
A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACGAAGGTAC----
---CAGGTAAGTAT
C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACGAAGGTAC
VRRACAAWGG---
A C G T A C G T A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACGAAGGTAC------
ACTCCAAGTACTTGGAA
A C G T C G T A A G T C A C T G C G T A C G T A A C T G A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A