Information for 6-CCGTCAAGAG (Motif 30)

A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T A C G T A C T G C G T A A G T C A C T G A C T G
p-value:1e-3
log p-value:-8.159e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background89.9 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCAAGAG
GCTGTCAA---
A C G T A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCGTCAAGAG--
--BTBRAGTGSN
A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCGTCAAGAG
ACGTCA----
A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCAAGAG
CCTGTCAA---
A C G T A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGTCAAGAG-
--NTCAAGTGG
A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

SMAD3/MA0795.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGTCAAGAG-
-CGTCTAGACA
A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGTCAAGAG--
--NTCAAGTGGN
A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CCGTCAAGAG
AAAGACCTGTCAATAC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

TFE3/MA0831.2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGTCAAGAG
--GTCACGTG
A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G
A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G

SMAD5/MA1557.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCGTCAAGAG-
-TGTCTAGACA
A G T C A G T C A C T G A C G T A G T C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A