Information for 1-AGCAGACAGGAC (Motif 1)

C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
Reverse Opposite:
A T C G C G A T T A G C A G T C C G A T A T C G C G A T A T G C A C G T A C T G A G T C A C G T
p-value:1e-11
log p-value:-2.760e+01
Information Content per bp:1.750
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.82%
Number of Background Sequences with motif317.9
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets98.5 +/- 50.0bp
Average Position of motif in Background104.5 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AGCAGACAGGAC
-CCAGACAG---
C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGCAGACAGGAC
TAACAGCAGACT----
A C G T A C G T A C G T A C G T C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGCAGACAGGAC
-CCAGACRSVB-
C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCAGACAGGAC
-BCAGACWA---
C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCAGACAGGAC
RHHCAGAGAGGB-
A C G T C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCAGACAGGAC-
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Foxo1/MA0480.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCAGACAGGAC
TGTAAACAGGA-
C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCAGACAGGAC-
CGAAGCACACAAAATA
A C G T A C G T A C G T C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGCAGACAGGAC
----CACAGN--
C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCAGACAGGAC-
AGCGGCACACACGCAA
A C G T A C G T A C G T C G T A C T A G G T A C C G T A A T C G G C T A T A G C C G T A C T A G A T C G C G T A T A G C A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A