Information for 24-CATGGTATATAG (Motif 40)

A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C G T C G T A A C G T C G T A A G T C A G T C C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.249e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets154.0 +/- 0.0bp
Average Position of motif in Background108.7 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATGGTATATAG------
-ATGGGATATATCCGCCT
A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CATGGTATATAG-------
----GTATAAAAGGCGGGG
A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CATGGTATATAG-------
----GTATAAAAGGCGGGG
A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

Foxq1/MA0040.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATGGTATATAG
TATTGTTTATT-
A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATGGTATATAG--
TATTATGGGATGGATAA
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CATGGTATATAG--
CCATTGTATGCAAAT
A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SOX2/MA0143.4/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CATGGTATATAG
NNCCATTGTNN----
A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T A C G T A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CATGGTATATAG
NNCTGGAATGTNN
A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGGTATATAG
-CTGGAATGYA-
A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G
A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CATGGTATATAG--
---GTTTTATTGGG
A G T C C G T A A C G T A C T G A C T G A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G