Information for 19-CTGTCCTTGTGG (Motif 28)

A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.167e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.1 +/- 48.2bp
Average Position of motif in Background89.9 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTTGTGG
BNTGDCCTTG---
A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTGTGG
NTGACCTTGAN-
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTGTGG
-TGACCTTGAV-
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTTGTGG
-TGACCTTGAN-
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTGTCCTTGTGG
GTGACCTTGRVN
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
C A T G G A C T T A C G G T C A G T A C G A T C G A C T A G C T A T C G T C G A T A C G T A G C

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTTGTGG--
GCTGACCTTGAACTN
A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

ESRRA/MA0592.3/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCCTTGTGG
NNTGACCTTGANN
A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTGTGG
CTGTTCCTGG--
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGTCCTTGTGG
NTGACCTTGA--
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGTCCTTGTGG
ATGACCTTGA--
A G T C A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C T G A C T G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T