Information for 3-TATACYCTYTGY (Motif 3)

A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T
Reverse Opposite:
C T G A A G T C C G T A T C A G C T G A C T A G C T A G A C T G A G C T C T G A C A G T T G C A
p-value:1e-4
log p-value:-1.048e+01
Information Content per bp:1.563
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif2635.7
Percentage of Background Sequences with motif3.37%
Average Position of motif in Targets121.7 +/- 39.5bp
Average Position of motif in Background101.7 +/- 73.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TATACYCTYTGY---
----NNCTTTGTTNN
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TATACYCTYTGY--
--VCCTCTCTGDDY
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TATACYCTYTGY-----
--TGACCTTTGCCCTAN
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TATACYCTYTGY-----
--TGACCTTTGMCCTNB
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T C A G T G C A G T A C G A T C A G C T A G C T A C G T T A C G T G C A G A T C G A T C G A C T G C T A A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TATACYCTYTGY----
--TGACCTTTGCCCTA
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TATACYCTYTGY----
--TGACCTTTGCCCCA
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TATACYCTYTGY
ANANGTGATACCCTATN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TATACYCTYTGY
ANANGTGATACCCTATN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T

SOX4/MA0867.2/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TATACYCTYTGY--
----NCCTTTGTTC
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TATACYCTYTGY---
-----CCTTTGTTTT
A C G T G T C A A G C T T C G A G T A C G A T C G A T C G A C T A G T C C G A T A C T G G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T