Information for 22-CTCCTAGAGTGC (Motif 22)

A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A G T C A C G T C G T A A C T G A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.089e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets100.0 +/- 0.0bp
Average Position of motif in Background184.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTCCTAGAGTGC
NGGCCTCCCAGGGAG-
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CTCCTAGAGTGC-
---BTBRAGTGSN
A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CTCCTAGAGTGC-
---CTYRAGTGSY
A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTCCTAGAGTGC--
---CTTGAGTGGCT
A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

BCL6/MA0463.2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTAGAGTGC--
NATTCCTCGAAAGCAN
A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
G T C A C T G A G C A T G A C T T G A C G A T C C G A T T G A C T C A G C G T A T G C A C G T A C A T G G A T C C T G A C G A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTCCTAGAGTGC--
----TTGAGTGSTT
A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCCTAGAGTGC-
--NNTTGAGTGNN
A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTCCTAGAGTGC--
----TTRAGTGSYK
A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTCCTAGAGTGC-
ATTTCCCAGVAKSCY
A C G T A C G T A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

NKX2-2/MA1645.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCTAGAGTGC---
-NNNTTGAGTGGNNN
A G T C A C G T A G T C A G T C A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A