| p-value: | 1e-5 |
| log p-value: | -1.247e+01 |
| Information Content per bp: | 1.884 |
| Number of Target Sequences with motif | 9.0 |
| Percentage of Target Sequences with motif | 1.20% |
| Number of Background Sequences with motif | 74.6 |
| Percentage of Background Sequences with motif | 0.16% |
| Average Position of motif in Targets | 119.3 +/- 45.8bp |
| Average Position of motif in Background | 93.3 +/- 59.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NR1H4/MA1110.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATACAC NAGGTCATTGA- |
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NR1H4::RXRA/MA1146.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCATACAC--- GAGGTCATTGACCTT |
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NR4A2::RXRA/MA1147.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCATACAC--- GAGGTCATTGACCCC |
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NR2F1(var.3)/MA1538.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATACAC--- AAGGTCANTGACCTT |
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PH0073.1_Hoxc9/Jaspar
| Match Rank: | 5 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATACAC--- GGAGGTCATTAATTAT |
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|
|
NR2F6(var.3)/MA1539.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATACAC--- AAGGTCANTGACCTT |
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FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATACAC-- NAGGTCANTGACCT |
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|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGTCATACAC AGGTCA----- |
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|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATACAC CGAGGTCAC---- |
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PH0012.1_Cdx1/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATACAC--- TAAGGTAATAAAATTA |
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