Information for 7-MCCAYAATGYTT (Motif 8)

G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T
Reverse Opposite:
C T G A C G T A C T A G A G T C C G T A C G A T A C G T C T A G C A G T A T C G C A T G C A G T
p-value:1e-11
log p-value:-2.706e+01
Information Content per bp:1.723
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif326.4
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets97.1 +/- 53.2bp
Average Position of motif in Background100.5 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143/MA0088.2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--MCCAYAATGYTT--
TACCCACAATGCATTG
A C G T A C G T G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:MCCAYAATGYTT
--GACAATGNN-
G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:MCCAYAATGYTT
-AAACAATGGCA
G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T
A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:MCCAYAATGYTT
-AAACAATGGAA
G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T
A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--MCCAYAATGYTT-
CTCACACAATGGCGC
A C G T A C G T G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX18/MA1563.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:MCCAYAATGYTT
--CACAATGC--
G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T
A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-MCCAYAATGYTT--
GAACADWATGTTCTT
A C G T G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T A C G T A C G T
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:MCCAYAATGYTT
VRRACAAWGG--
G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MCCAYAATGYTT
VRAACAATGG--
G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---MCCAYAATGYTT--
GGGAACACAATGTTCCC
A C G T A C G T A C G T G T C A G T A C A T G C G T C A G A C T G T C A C G T A C G A T A C T G G A T C C G A T A G C T A C G T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C