Information for 6-ATCACCTACCTA (Motif 8)

T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A
Reverse Opposite:
A C G T C T G A A C T G C T A G A C G T C G T A C A T G A C T G A C G T C A T G C T G A A C G T
p-value:1e-11
log p-value:-2.762e+01
Information Content per bp:1.757
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.04%
Number of Background Sequences with motif100.0
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets101.4 +/- 47.3bp
Average Position of motif in Background98.9 +/- 66.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATCACCTACCTA
-NNACTTACCTN
T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCACCTACCTA----
ACATGCTACCTAATAC
T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATCACCTACCTA----
ACTTGCTACCTACACC
T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCACCTACCTA--
TTGACCTANTTATN
T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORC/MA1151.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATCACCTACCTA-
-TGACCTANTTAN
T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A A C G T
A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATCACCTACCTA
-GCACGTACCC-
T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A
A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATCACCTACCTA
NNCTCACCTCCTNN
A C G T A C G T T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

Nkx3-2/MA0122.3/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCACCTACCTA
ATAACCACTTAAA--
A C G T A C G T A C G T T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ATCACCTACCTA-
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATCACCTACCTA
-TGACCTARTT-
T C G A A G C T G T A C G T C A G T A C G T A C G C A T C G T A A G T C T G A C A G C T T G C A
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T