| p-value: | 1e-3 |
| log p-value: | -7.339e+00 |
| Information Content per bp: | 1.873 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 0.72% |
| Number of Background Sequences with motif | 60.0 |
| Percentage of Background Sequences with motif | 0.12% |
| Average Position of motif in Targets | 109.2 +/- 45.8bp |
| Average Position of motif in Background | 106.6 +/- 60.8bp |
| Strand Bias (log2 ratio + to - strand density) | -1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0133.1_Hic1_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.80 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GTGCCCTAGT-- GGGTGTGCCCAAAAGG |
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RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTGCCCTAGT-- BTGACCTAVTTW |
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|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 3 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTGCCCTAGT- -TGACCTARTT |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTGCCCTAGT- -TGACCTARTT |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 5 |
| Score: | 0.73 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTGCCCTAGT-- NNHYTGACCTAGWTT |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.73 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GTGCCCTAGT--- -TGACCTANTTAN |
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|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTGCCCTAGT---- TTGACCTANTTATN |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTGCCCTAGT- NTGACCTAATT |
|
|
|
HIC2/MA0738.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTGCCCTAGT ATGCCCACC- |
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|
|
PB0200.1_Zfp187_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GTGCCCTAGT------ GAGCCCTTGTCCCTAA |
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