Information for 9-TGCAGGTT (Motif 33)

C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T
Reverse Opposite:
T C G A G C T A T A G C G T A C C G A T A C T G A G T C C G T A
p-value:1e-3
log p-value:-7.749e+00
Information Content per bp:1.806
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif7.66%
Number of Background Sequences with motif2432.5
Percentage of Background Sequences with motif5.04%
Average Position of motif in Targets88.7 +/- 52.0bp
Average Position of motif in Background99.5 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF3/MA0522.3/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGTT--
NNGCAGGTGNN
A C G T C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGTT--
NNGCAGGTGNN
A C G T C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGTT---
SDGCAGGTGCNS
A C G T C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI1/MA1558.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TGCAGGTT--
GGCAGGTGCA
C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTT--
RGCAGGTGYA
C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TGCAGGTT--
NNCAGGTGNN
C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TGCAGGTT---
-VCAGGTRDRY
C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T A C G T
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGCAGGTT---
NNGGCAGGTGCNN
A C G T A C G T C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCAGGTT--
NNGCAGGTGNN
A C G T C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

PB0024.1_Gcm1_1/Jaspar

Match Rank:10
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----TGCAGGTT---
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A C G T A C G T C G A T T C A G A G T C G C T A C A T G A T C G C G A T A G C T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A