Information for 19-ATGCTTCTAC (Motif 26)

C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G C G T A C G T A A C T G A G T C C G T A A C G T
p-value:1e-7
log p-value:-1.678e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets122.7 +/- 43.4bp
Average Position of motif in Background90.3 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ATGCTTCTAC
--GCTTCC--
C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ATGCTTCTAC---
AGATGCTRCTRCCHT
A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ATGCTTCTAC--
NNGCTTCTGTNN
C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C A C G T A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATGCTTCTAC
CAAGCTT----
A C G T C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATGCTTCTAC
ATGMATATDC
C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

ZSCAN29/MA1602.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:ATGCTTCTAC-----
---CGTCTACACGGG
C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATGCTTCTAC----
ACATGCTACCTAATAC
A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ATGCTTCTAC
GTCTGTTTCTA-
A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T

Spz1/MA0111.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ATGCTTCTAC---
--GCTGTTACCCT
C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

GCM1/MA0646.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATGCTTCTAC
CATGCGGGTAC
A C G T C G T A A C G T A C T G A G T C A C G T A C G T A G T C A C G T C G T A A G T C
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C