Information for 3-YMCCATAKGSMY (Motif 3)

A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
Reverse Opposite:
C T G A A C G T A T C G A G T C G T A C A C G T C G T A A C G T A C T G A C T G A C G T C T G A
p-value:1e-7
log p-value:-1.683e+01
Information Content per bp:1.809
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif45.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets171.7 +/- 18.2bp
Average Position of motif in Background122.1 +/- 78.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:YMCCATAKGSMY
CACCATATGGCG
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G

NEUROD2/MA0668.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:YMCCATAKGSMY
-GCCATATGGT-
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:YMCCATAKGSMY
-ACCATATGTT-
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T

OLIG2/MA0678.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:YMCCATAKGSMY
-ACCATATGGT-
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:5
Score:0.76
Offset:1
Orientation:forward strand
Alignment:YMCCATAKGSMY
-ACCATATGTT-
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.76
Offset:2
Orientation:forward strand
Alignment:YMCCATAKGSMY
--CCATATGT--
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:YMCCATAKGSMY
-AACATATGTT-
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T

ATOH7/MA1468.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:YMCCATAKGSMY
-AACATATGTC-
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:YMCCATAKGSMY
CGCCATATGTCC
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A T G C T C A G A T G C A T G C C T G A G C A T C G T A A G C T A T C G A C G T A G T C T A G C

OLIG1/MA0826.1/Jaspar

Match Rank:10
Score:0.72
Offset:1
Orientation:forward strand
Alignment:YMCCATAKGSMY
-AACATATGTT-
A G C T G T C A A G T C A G T C C G T A A C G T C G T A A C T G C T A G A T G C G T C A A G C T
A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T