Information for 17-TAGTCCAGGG (Motif 30)

A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A C T G A C T G C G T A A G T C A C G T C G T A
p-value:1e-3
log p-value:-7.089e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif93.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background98.9 +/- 186.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAGTCCAGGG--
NNTAATCCNGNCNN
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TAGTCCAGGG
TCCAAAGTCCAGA-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TAGTCCAGGG
TCCAAAGTCCAAA-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T

PITX1/MA0682.2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAGTCCAGGG
CTAATCCC---
A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T A C G T A C G T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TAGTCCAGGG---
-AGGTCAAGGTCA
A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PITX2/MA1547.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGTCCAGGG
ATAATCCC---
A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TAGTCCAGGG-
GGCAAAAGTCCAATAA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAGTCCAGGG
RCATTCCWGG-
A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TAGTCCAGGG
CCACATTCCAGGC
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
G A T C G A T C C T G A T G A C C T G A A G C T C G A T G T A C G A T C C G T A C T A G T A C G T G A C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAGTCCAGGG
GCTAATCC----
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C T G A C T G A C T G
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T