Information for 1-TGAAGAAACG (Motif 2)

A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T A C G T A G T C A C G T A C G T G T A C C G T A
p-value:1e-15
log p-value:-3.480e+01
Information Content per bp:1.950
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets109.4 +/- 44.2bp
Average Position of motif in Background101.9 +/- 50.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGAAGAAACG
ATGATGCAAT-
A C G T A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G
T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T A C G T

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGAAGAAACG
-NTAGCAACG
A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G
A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGAAGAAACG-----
---AGAAACGAAAGT
A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGAAGAAACG
MTGATGCAAT-
A C G T A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G
T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGAAGAAACG---
--NAGAAACAGNN
A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGAAGAAACG-----
-GGAGAAAGGTGCGA
A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

POL007.1_BREd/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGAAGAAACG
--NANANAC-
A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G
A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TGAAGAAACG
TACTGGAAAAAAAA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

ATF4/MA0833.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TGAAGAAACG-
AAATGATGCAATAA
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G A C G T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A

FOXE1/MA1487.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TGAAGAAACG--
CCTTAAATAAACAAT
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G G T C A C G T A C G T A A G T C A C T G A C G T A C G T
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T