Information for 4-CTGCAGCCTGCA (Motif 9)

G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C T G A T C G A G T C A C G T A C T G A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.908
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif15.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets119.5 +/- 30.3bp
Average Position of motif in Background88.3 +/- 46.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGCAGCCTGCA
--BCAGACWA--
G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

ZBTB6/MA1581.1/Jaspar

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGCAGCCTGCA
GTCCTTGAGCCCG--
A C G T A C G T A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CTGCAGCCTGCA
AATCGCACTGCATTCCG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTGCAGCCTGCA-
WYATGCATWATGCAT
A C G T A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTGCAGCCTGCA
---CAGCC----
G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGCCTGCA
CACAGCAGGGG---
A C G T A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---CTGCAGCCTGCA
DCHCAGCAGGRGGCC
A C G T A C G T A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

MTF1/MA0863.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGCAGCCTGCA-
TTTGCACACGGCAC
A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

CTCFL/MA1102.2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTGCAGCCTGCA
GCGCCCCCTGNN
G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTGCAGCCTGCA
NANTGCSGCA----
A C G T A C G T G T A C C G A T A C T G A G T C C G T A A C T G A T G C G T A C C G A T A C T G A G T C C G T A
G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A A C G T A C G T A C G T A C G T