Information for 2-TGGATAGGCAGA (Motif 2)

A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C G T A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGATAGGCAGA
ATGMATATDC---
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGGATAGGCAGA-
---ATATGCAAAT
A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGATAGGCAGA
TGGAACAGMA--
A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGGATAGGCAGA-
CTTTGTTATGCAAAT
A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGATAGGCAGA
GTGGAT-------
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGGATAGGCAGA---
--AATATGCAAATAA
A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGATAGGCAGA
NTGATTGACAGN
A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGGATAGGCAGA
CTACTTGGATACGGAAT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TGGATAGGCAGA
CTCATGAATATTCAT-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGGATAGGCAGA--
----TATGCAAATC
A C G T A C T G A C T G C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C