Information for 7-CATGSACTCTRY (Motif 14)

A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T
Reverse Opposite:
C T G A G A T C G C T A C A T G C G T A C A T G A C G T A T G C A T G C G T C A C G A T T A C G
p-value:1e-7
log p-value:-1.760e+01
Information Content per bp:1.512
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets119.9 +/- 51.7bp
Average Position of motif in Background65.8 +/- 51.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4A/MA0114.4/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CATGSACTCTRY-
NNTGGACTTTGNN
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CATGSACTCTRY-
NNTGGACTTTGNN
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATGSACTCTRY------
--TGGACTTTGNNCTNTG
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CATGSACTCTRY--
NNATTGGACTTTNGNN
A C G T A C G T A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CATGSACTCTRY
-CTGACCTTTG-
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CATGSACTCTRY--
WYATGCATWATGCAT
A C G T A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

NEUROD1/MA1109.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGSACTCTRY--
-NNNCCATCTGTNN
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T A C G T
A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

CTCFL/MA1102.2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CATGSACTCTRY-
-GCGCCCCCTGNN
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T
A C G T T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CATGSACTCTRY-
---GCCATCTGTT
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T A C G T
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CATGSACTCTRY
-TTGAMCTTTG-
A T G C G C T A C A G T T A C G T A C G T G C A G T A C G C A T G T A C C G A T C T A G G A C T
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T