Information for 6-CATATGGCCG (Motif 11)

A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A G T C C G T A A C G T C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background139.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD2/MA0668.1/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--CATATGGCCG
ACCATATGGC--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-CATATGGCCG
ACATATGG---
A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:3
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CATATGGCCG
NACATATGGN--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

MSGN1/MA1524.1/Jaspar

Match Rank:4
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CATATGGCCG
NNACATATGGCN-
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
A T C G T C A G T G C A A T G C T C G A G C A T C G T A A G C T A T C G T A C G A G T C T A C G A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CATATGGCCG
AACATATGTT--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T

ATOH7/MA1468.1/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CATATGGCCG
AACATATGTC--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CATATGGCCG
AACATATGTC--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T

NEUROG1/MA0623.2/Jaspar

Match Rank:8
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CATATGGCCG
GACATATGTC--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C A C G T A C G T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---CATATGGCCG
NGCCATATGGTG-
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CATATGGCCG
ANCATATGGT--
A C G T A C G T A G T C C G T A A C G T C G T A A C G T A C T G A C T G A G T C A G T C A C T G
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T A C G T