Information for 7-CCTCTCATGATC (Motif 7)

A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C C G T A A C G T A C T G C G T A A C T G C G T A A C T G A C T G
p-value:1e-4
log p-value:-1.124e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTCTCATGATC
AGCCACTCAAG---
A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTCTCATGATC
-NNCTCATTAT-
A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C
A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T

Rarg(var.2)/MA0860.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTCATGATC--
TGACCTTTCGTGACCTT
A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C A C G T A C G T
A G C T C T A G C G T A T G A C G T A C A G C T A G C T A G C T T A G C C A T G A G C T A C T G T G C A G T A C T A G C A G C T G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTCATGATC---
GCAACCTCATTATNNNN
A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTCTCATGATC---
NNNACCTCATTATCNTN
A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCTCTCATGATC
TAACCACTCAAGAA-
A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTCTCATGATC-
AGATCACCTGATCT
A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C A C G T
C T G A T C A G T C G A G C A T A T G C G C T A A T G C T A G C G C A T A T C G G C T A A G C T A G T C G A C T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTCATGATC
TGWCCTCARNTGACC
A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTCTCATGATC
-GTCACATGAY-
A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCTCTCATGATC
TGACCTCAGGTGACC
A C G T A C G T A C G T A G T C A G T C A C G T A G T C A C G T A G T C C G T A A C G T A C T G C G T A A C G T A G T C
G A C T T A C G C G T A T G A C A G T C G A C T A T G C C T G A C A T G T A C G G C A T T A C G T C G A T G A C G T A C