Information for 4-AAGTTAGG (Motif 21)

C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G
Reverse Opposite:
G T A C A G T C A C G T C G T A C G T A A G T C A C G T A C G T
p-value:1e-6
log p-value:-1.390e+01
Information Content per bp:1.943
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif529.3
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets109.9 +/- 59.5bp
Average Position of motif in Background100.0 +/- 54.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAGTTAGG
AAAAGTCAA-
A C G T A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGTTAGG
ACTAGTTAAC
A C G T A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGTTAGG--
CAGGTAAGTAT
A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G A C G T A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

TLX2/MA1577.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGTTAGG
CTAATTAG-
A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G
A G T C G A C T C T G A C G T A A C G T A C G T C G T A T C A G A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAGTTAGG-
GGAGGAGGTGAGAA
A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTAGG
NNATAAGGNN--
A C G T A C G T A C G T A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTAGG-----
NTTTTAGTTAACNNAGN
A C G T A C G T A C G T A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGTTAGG-----
NNNTTAGTTAACTNANN
A C G T A C G T A C G T A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGTTAGG-----
-GGTTAGAGACCT
C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

NR1I3/MA1534.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGTTAGG
AAAGTTCAT
A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C T G A C T G
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T