Information for 3-GSGRWTGAAGWK (Motif 4)

A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G
Reverse Opposite:
G T A C C G A T A G T C A C G T A C G T A G T C C G T A C G T A A G T C A G T C A T C G A G T C
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.839
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif24.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets76.5 +/- 31.5bp
Average Position of motif in Background79.6 +/- 65.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GSGRWTGAAGWK
-----NGAAGC-
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GSGRWTGAAGWK-
----NTCAAGTGG
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GSGRWTGAAGWK
GGYAATGAAA--
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GSGRWTGAAGWK
GGGAATTGTAGT-
A C G T A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GSGRWTGAAGWK
NNNANTGA----
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GSGRWTGAAGWK--
----BTBRAGTGSN
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GSGRWTGAAGWK
-----TGACGT-
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GSGRWTGAAGWK--
----NTCAAGTGGN
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GSGRWTGAAGWK-----
NNNANTGCAGTGCNNTT
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GSGRWTGAAGWK--
----CTYRAGTGSY
A C T G T A C G A C T G C T A G C G A T A C G T A C T G C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C