Information for 3-GGGTTACTAC (Motif 24)

A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C G T C G T A C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-8.871e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets121.0 +/- 0.0bp
Average Position of motif in Background45.7 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGTTACTAC
-CGTTGCTAT
A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C
A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGTTACTAC------
GGGTTACTANAGGTCA
A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTACTAC----
NCCGTTGCTANGNGN
A C G T A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGGTTACTAC-
-GTTAACTAGN
A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------GGGTTACTAC
NMMNBAAAGGGTTAA---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTACTAC
NGGGATTA----
A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGGTTACTAC--------
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTACTAC----
NNCGTTGCTATGGNN
A C G T A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTACTAC--
GCTGGGGGGTACCCCTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

PITX1/MA0682.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTACTAC
NGGATTAN---
A C G T A C T G A C T G A C T G A C G T A C G T C G T A A G T C A C G T C G T A A G T C
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T