Information for 14-AGTGGACTCG (Motif 34)

C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A C G T A G T C A G T C C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.036e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background111.8 +/- 67.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGTGGACTCG----
NNATTGGACTTTNGNN
A C G T A C G T C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGTGGACTCG
NNTGTGGATTSS
A C G T A C G T C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTGGACTCG
-GTGGAT---
C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTGGACTCG-
TGTGGATTNNN
C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

VDR/MA0693.2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTGGACTCG
--TGAACTCA
C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGTGGACTCG------
TACGAGACTCCTCTAAC
A C G T C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

MSANTD3/MA1523.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGACTCG
GTGAGTGNAC---
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGACTCG
NTCAAGTGGN----
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGACTCG
TTGAGTGSTT---
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AGTGGACTCG
NNNTTGAGTGGNNN--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G C G T A A G T C A C G T A G T C A C T G
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T A C G T