| p-value: | 1e-13 |
| log p-value: | -3.117e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.73% |
| Number of Background Sequences with motif | 2.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 163.4 +/- 15.6bp |
| Average Position of motif in Background | 60.8 +/- 1.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
TATA-Box(TBP)/Promoter/Homer
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TACTTTTATAGA- -CCTTTTATAGNC |
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POL012.1_TATA-Box/Jaspar
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TACTTTTATAGA NNNNNNCTTTTATAN- |
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TBP/MA0108.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TACTTTTATAGA NNNNNNCTTTTATAN- |
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PH0078.1_Hoxd13/Jaspar
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TACTTTTATAGA--- NNANTTTTATTGGNNN |
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HOXB13/MA0901.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TACTTTTATAGA-- NNATTTTATTGGNN |
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|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TACTTTTATAGA- ---TTTTATGGCM |
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|
|
PH0056.1_Hoxa9/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TACTTTTATAGA--- ANTAATTTTATGGCCGN |
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|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TACTTTTATAGA--- NTNAATTTTATTGNATT |
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|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TACTTTTATAGA- ---TTTAATTGCN |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TACTTTTATAGA- ---TTTTATTRGN |
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