Information for 15-GGCTGGCCSC (Motif 27)

A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C
Reverse Opposite:
C T A G A T C G A C T G A C T G G T A C A G T C C G T A A C T G A G T C A G T C
p-value:1e-5
log p-value:-1.198e+01
Information Content per bp:1.791
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.29%
Number of Background Sequences with motif349.5
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets90.8 +/- 56.5bp
Average Position of motif in Background101.6 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.43
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GGCTGGCCSC----
-NNTGGCCCCAGNN
A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGCCSC-
CTGTCTGTCACCT
A C G T A C G T A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGGCCSC-
TGTCTGDCACCT
A C G T A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGCTGGCCSC-
---TGCCAGCB
A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C A C G T
A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCTGGCCSC
VGCTGWCAVB
A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGCTGGCCSC--
NGTAGGTTGGCATNNN
A C G T A C G T A C G T A C G T A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTGGCCSC
-NTTGGCANN
A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTGGCCSC---
-SCTGTCARCACC
A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C A C G T A C G T A C G T
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTGGCCSC
GGTTGGCAT-
A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGCCSC
TWGTCTGV----
A C G T A C G T A C T G T C A G G T A C A C G T C T A G A C T G A G T C G T A C A T G C A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T