Information for 20-TGTAWGGCCACC (Motif 22)

C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
Reverse Opposite:
T A C G C A T G A C G T C A T G C A T G A G T C A G T C C G A T A G C T C G T A A G T C G C T A
p-value:1e-3
log p-value:-8.456e+00
Information Content per bp:1.705
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif169.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets163.5 +/- 1.5bp
Average Position of motif in Background100.3 +/- 71.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:TGTAWGGCCACC
--TRAGGTCA--
C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TGTAWGGCCACC
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TGTAWGGCCACC
---AAGGTCAC-
C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTAWGGCCACC
CTGTCTGG-----
A C G T C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGTAWGGCCACC
TGTCTAGA----
C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTAWGGCCACC
VBSYGTCTGG-----
A C G T A C G T A C G T C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGTAWGGCCACC
----AGGTCA--
C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGTAWGGCCACC
NTGGGTGTGGCC---
A C G T A C G T A C G T C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TGTAWGGCCACC
GGTCANYTGAGGWCA--
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTAWGGCCACC
NRBCARRGGTCA--
A C G T A C G T C A G T A C T G A C G T T C G A C G T A A C T G A C T G G A T C G A T C C G T A G T A C A G T C
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T