Information for 17-AGGTTGKTVA (Motif 30)

C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A
Reverse Opposite:
C G A T A G C T C G T A G T A C G A T C G C T A C G T A A G T C A G T C C G A T
p-value:1e-5
log p-value:-1.173e+01
Information Content per bp:1.717
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif455.0
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets111.6 +/- 55.0bp
Average Position of motif in Background103.0 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGGTTGKTVA
CAGGTAAGTAT
A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

NR1H4/MA1110.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGGTTGKTVA
NAGGTCATTGA
A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AGGTTGKTVA
NNTTGAGGTTNN---
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGTTGKTVA
VCAGGTRDRY--
A C G T A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGTTGKTVA----
AAGGTCACTGACCTT
A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A A C G T A C G T A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C C T G A A T G C A G C T T C A G T G C A G T A C G T A C A G C T G A C T

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGTTGKTVA----
AAGGTCATTGACCTT
A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A A C G T A C G T A C G T A C G T
C T G A C T G A A C T G C T A G A C G T A G T C T C G A A C G T A G C T T C A G G T C A A G T C T G A C G A C T G A C T

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGTTGKTVA----
GAGGTCATTGACCCC
A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A A C G T A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A G C T A G T C T C G A C G A T A G C T T A C G T G C A G T A C G T A C A G T C A G T C

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGTTGKTVA----
GAGGTCATTGACCTT
A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A A C G T A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A G T C C T G A G C A T A G C T T C A G T G C A G T A C G T A C A G C T A G C T

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGTTGKTVA
GAGGTCAT---
A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AGGTTGKTVA
TCGCGAAGGTTGTACT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T C G A T C T A G C A T G C G A T T C G A C G T A
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T