| p-value: | 1e-4 |
| log p-value: | -1.088e+01 |
| Information Content per bp: | 1.638 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 36.36% |
| Number of Background Sequences with motif | 1324.5 |
| Percentage of Background Sequences with motif | 1.58% |
| Average Position of motif in Targets | 129.5 +/- 64.0bp |
| Average Position of motif in Background | 98.3 +/- 85.6bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0108.1_Atf1_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -RATGAYNAGM--- GAATGACGAATAAC |
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HOXA4/MA1496.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --RATGAYNAGM NTAATGAC---- |
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POL002.1_INR/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---RATGAYNAGM NNNANTGA----- |
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HOXB4/MA1499.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --RATGAYNAGM NTAATGAT---- |
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|
|
NKX6-3/MA1530.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---RATGAYNAGM TTTAATGAN---- |
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|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --RATGAYNAGM NTAATGAN---- |
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|
|
NR1H4/MA1110.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --RATGAYNAGM TCAATGACCTA- |
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|
|
HOXD4/MA1507.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --RATGAYNAGM NTAATGAN---- |
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|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---RATGAYNAGM GTTAATGGCC--- |
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FOSL1::JUND(var.2)/MA1143.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | RATGAYNAGM- -ATGACGTAAC |
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