Information for 5-TGCCTCAGAAAA (Motif 5)

A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T A C G T T G A C A C G T C T A G C G T A C T A G A C T G G T A C T C G A
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.766
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif213.6
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets117.2 +/- 57.1bp
Average Position of motif in Background99.1 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGCCTCAGAAAA
--CCYMATAAAA
A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A
A C G T A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCCTCAGAAAA
TTCCKNAGAA--
A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TGCCTCAGAAAA
CATTTCCTGAGAAAT
A C G T A C G T A C G T A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

PH0068.1_Hoxc13/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGCCTCAGAAAA---
AAAGCTCGTAAAATTT
A C G T A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TGCCTCAGAAAA
--NCYAATAAAA
A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A
A C G T A C G T C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

NFE2L1/MA0089.2/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGCCTCAGAAAA
AGAATGACTCAGCAAT
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A
G C T A T A C G G T C A T C G A G C A T C A T G C T G A A T G C C G A T G T A C C G T A C A T G A T G C C G T A C G T A C G A T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCCTCAGAAAA
TTCTNNAGAANT
A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGCCTCAGAAAA---
AAACCTCGTAAAATTT
A C G T A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTCAGAAAA--
ATGACTCAGCANWWT
A C G T A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T
T C G A A C G T A C T G C G T A T A G C G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCCTCAGAAAA-
--GCTCGTAAAAA
A C G T C A T G T G A C G A T C G C A T A G T C C G T A A C T G C G T A G T C A C G T A C G T A A C G T
A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A