Information for 3-TACTAAGGGGMT (Motif 3)

A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T
Reverse Opposite:
G T C A A C G T G T A C G T A C A G T C G A T C C A G T A G C T C G T A A C T G C G A T C T G A
p-value:1e-5
log p-value:-1.250e+01
Information Content per bp:1.709
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif42.86%
Number of Background Sequences with motif505.3
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets101.0 +/- 45.9bp
Average Position of motif in Background108.1 +/- 88.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0194.1_Zbtb12_2/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TACTAAGGGGMT
AGNGTTCTAATGANN-
A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A A C G T

Isl1/MA1608.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TACTAAGGGGMT
NNCTAATGGNN-
A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TACTAAGGGGMT
CACCTACTAT------
A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TACTAAGGGGMT
--CTAATKGV--
A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T
A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TACTAAGGGGMT-------
--TTAAGGGGATTAACTAC
A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:TACTAAGGGGMT---
----AAGAGGATTAG
A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TACTAAGGGGMT
RGMCCTACTRTGTGC--
A C G T A C G T A C G T A C G T A C G T A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TACTAAGGGGMT------
-TATTATGGGATGGATAA
A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

MZF1/MA0056.2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TACTAAGGGGMT---
--NNNTGGGGATTNN
A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TACTAAGGGGMT
RSCACTYRAG----
A C G T A C G T A G C T C G T A A G T C C G A T C T G A G C T A C A T G C T A G C A T G A C T G G T C A A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T