Information for 5-GGGAAACCCTGG (Motif 6)

A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A G T C A G T C A G T C
p-value:1e-11
log p-value:-2.609e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.2 +/- 5.1bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prdm15/MA1616.1/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GGGAAACCCTGG---
AGGAAAACCTGGAGC
A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:2
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GGGAAACCCTGG------
---AAAACCTGGANHGGR
A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGAAACCCTGG
GGGGGAATCCCC--
A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGAAACCCTGG
GGAAATCCCC--
A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGGAAACCCTGG
-GGAAANCCCC-
A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGAAACCCTGG
-GGAAATTCCC-
A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGAAACCCTGG
CCTGGGAAAG-----
A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T A C G T A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGGAAACCCTGG-----
--GCACCCCTGGGTGCC
A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGGAAACCCTGG
AGGGGAATCCCCT-
A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGAAACCCTGG
AGGGGAATCCCCT-
A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C T G
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T A C G T