Information for 9-AGCCAATCCAAT (Motif 14)

C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C T G A C T G A G T C A C G T
p-value:1e-4
log p-value:-9.666e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCCAATCCAAT
ACTAGCCAATCA---
A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGCCAATCCAAT
AGCCAATCAGA-
C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGCCAATCCAAT
AACCAATCAGA-
C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGCCAATCCAAT
AGCCAATCGG--
C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCCAATCCAAT----
AATCAATTCAATAATT
C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCCAAT
TAAYCYAATCAA--
A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T
G C A T T C G A C T G A G A T C A G T C G A T C G T C A G T C A A C G T A G T C C G T A C T G A A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCCAAT---
CGACCCAATCAACGGTG
A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

HOXB13/MA0901.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCCAATCCAAT--
AACCAATAAAATTT
C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGCCAATCCAAT---
AACCCAATAAAATTCG
A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCCAATCCAAT
CGTGCCAAG-----
A C G T A C G T C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T