Information for 15-CACTTAAGTG (Motif 28)

A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C T G A G C T A C T G
p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.978
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.7 +/- 39.9bp
Average Position of motif in Background50.2 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.79
Offset:3
Orientation:reverse strand
Alignment:CACTTAAGTG--
---TTAAGTGGT
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:CACTTAAGTG-
---TTAAGTGC
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CACTTAAGTG------
NTNNTTAAGTGGNTNAN
A C G T A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx3-2/MA0122.3/Jaspar

Match Rank:4
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CACTTAAGTG-----
--NTTAAGTGGTTNN
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CACTTAAGTG--
--NTCAAGTGGN
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CACTTAAGTG--
--CTYRAGTGSY
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CACTTAAGTG------
NTNNTTAAGTGGTTANN
A C G T A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CACTTAAGTG-
--NTCAAGTGG
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CACTTAAGTG--
-NNTTGAGTGNN
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CACTTAAGTG--
--BTBRAGTGSN
A G T C C T G A A G T C A C G T A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C