Information for 12-AGAACGATAAAC (Motif 14)

C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C G T A C G T A G T C A C G T
p-value:1e-4
log p-value:-9.406e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0072.1_Sox5_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGAACGATAAAC-
TTTAGAACAATAAAAT
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AGAACGATAAAC-
TTAAGAACAATAAATT
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AGAACGATAAAC
NTTNAGAACAATTA--
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGAACGATAAAC--
TNNAGAACAATANATNN
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGAACGATAAAC--
TAGTGAACAATAGATTT
A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGAACGATAAAC---
-CAAACGTAAACAAT
C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGAACGATAAAC-----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAACGATAAAC-
AAAAACCATTAAGG
A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

PH0044.1_Homez/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AGAACGATAAAC-
NNTAAAAACGATGTTNT
A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAACGATAAAC---
ATTTACGACAAATAGC
A C G T C G T A A C T G C G T A C G T A A G T C A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C