Information for 5-TTBACAGCTTAC (Motif 5)

A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C
Reverse Opposite:
A T C G A G C T C G T A C T G A C A T G G T A C C G A T A C T G A C G T T A G C C T G A G T C A
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.720
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif611.3
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets90.0 +/- 62.0bp
Average Position of motif in Background100.7 +/- 74.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTBACAGCTTAC
TTMACACCTT--
A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTBACAGCTTAC-
GTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTBACAGCTTAC
TTGACAGC----
A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTBACAGCTTAC-
NTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TTBACAGCTTAC-
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTBACAGCTTAC-
TCNCTTTACAGCGNNNT
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TTBACAGCTTAC
----CTGTTTAC
A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TTBACAGCTTAC-
GTATTGACAGGTNNTT
A C G T A C G T A C G T A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTBACAGCTTAC
TTGACAGG----
A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTBACAGCTTAC-
GGATTGACAGGTCNTT
A C G T A C G T A C G T A C G T A G C T A C T G G T C A A G T C C G T A A C T G G T A C A G C T C G A T C T G A A T G C A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T