Information for 7-AAGATTTCATTG (Motif 8)

C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C T G C G T A C G T A C G T A A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.036e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:AAGATTTCATTG--
----TTTCATTRCC
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:AAGATTTCATTG--
----TTTCATKGCC
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AAGATTTCATTG---
---NTTTCATTRCHD
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T A C G T C G A T A G T C C G T A A C G T A C G T C T A G A G T C G A C T C A G T

HOXB13/MA0901.2/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAGATTTCATTG---
-NNATTTTATTGGNN
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AAGATTTCATTG--
----TTTNATTGCY
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGATTTCATTG----
NNANTTTTATTGGNNN
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AAGATTTCATTG-
GACAGAGATATCAGTGT
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGATTTCATTG----
NTNAATTTTATTGNATT
A C G T C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAGATTTCATTG----
NNAATTTTATTGGNTN
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AAGATTTCATTG---
---NTTTTATTGCNN
C G T A C G T A A C T G C G T A A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T