Information for 4-CCATGCGA (Motif 31)

A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C C G T A A C G T A C T G A C T G
p-value:1e-2
log p-value:-5.305e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif40.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background101.2 +/- 69.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCATGCGA---
GTGCCACGCGACTG
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

MXI1/MA1108.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CCATGCGA-
NNCATGTGNN
A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CCATGCGA-
KCCACGTGAC
A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCATGCGA-
ACCACGTGAC
A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C

USF2/MA0526.3/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCATGCGA---
TGGTCATGTGACCT
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T
C A G T C T A G T C A G A G C T A T G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G C A T

USF1/MA0093.3/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCATGCGA---
TGGTCATGTGACCT
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T
C A G T C T A G T C A G A G C T T A G C G T C A A G C T T C A G C A G T A T C G T C G A A G T C G A T C G A C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCATGCGA-
RTCATGTGAC
A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C

Ebf2/MA1604.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCATGCGA--
TTCCCAAGGGACT
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

EBF3/MA1637.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CCATGCGA--
TTCCCAAGGGAAT
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A A C G T A C G T
A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

SOX18/MA1563.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCATGCGA
CACAATGC--
A C G T A C G T A G T C A G T C C G T A A C G T A C T G A G T C A C T G C G T A
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T