Information for 18-GGAGCCTTGCAG (Motif 34)

A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G A G T C C G T A C G T A A C T G A C T G A G T C A G C T A G T C A G T C
p-value:1e-5
log p-value:-1.338e+01
Information Content per bp:1.974
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.7 +/- 49.7bp
Average Position of motif in Background46.8 +/- 7.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCTTGCAG
CGGAGC-------
A C G T A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF16/MA1654.1/Jaspar

Match Rank:2
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCCTTGCAG------
AATAGGGAGCCATGGAAGGTTTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A A C G T C T G A C T A G C A T G A T C G C T G A C T A G G A T C G A T C T G C A A G C T C A T G T C A G T C G A C T G A C T A G C T A G A G C T A C G T A G C T A G C T

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GGAGCCTTGCAG
NTNNNAGGAGTCTCNTN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCCTTGCAG
BNTGDCCTTG---
A C G T A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCCTTGCAG----
TTCTAGAANNTTCCAGAANN
A C G T A C G T A C G T A C G T A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GGAGCCTTGCAG
-CAGCC------
A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGAGCCTTGCAG
NTGACCTTGAN-
A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G
C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GGAGCCTTGCAG--
TGTTKCCTAGCAACM
A C G T A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGAGCCTTGCAG--
--GGGATTGCATNN
A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G A C G T A C G T
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GGAGCCTTGCAG-------
--NNNANTGCAGTGCNNTT
A C T G A C T G C T G A A C T G A G T C A G T C A C G T A C G T A C T G A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T