Information for 2-ATGACCAATT (Motif 2)

C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T
Reverse Opposite:
C G T A C T G A A C G T C G A T C T A G C T A G A G C T G T A C C T G A A G C T
p-value:1e-11
log p-value:-2.734e+01
Information Content per bp:1.850
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif180.8
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets83.1 +/- 54.6bp
Average Position of motif in Background97.5 +/- 51.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---ATGACCAATT--
ACCGTGACTAATTNN
A C G T A C G T A C G T C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PH0107.1_Msx2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ATGACCAATT------
GAAGACCAATTAGCGCT
A C G T C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

PH0005.1_Barhl1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATGACCAATT-----
AACAACCAATTAATTC
A C G T C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGACCAATT-----
CAAAACCAATTAATTT
A C G T C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PH0006.1_Barhl2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATGACCAATT-----
AAAAACCAATTAAGAA
A C G T C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

LHX2/MA0700.2/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:forward strand
Alignment:ATGACCAATT---
--AACCAATTAAT
C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

RORB/MA1150.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ATGACCAATT-
NTGACCTAATT
C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T

NR1H4/MA1110.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATGACCAATT
TCAATGACCTA--
A C G T A C G T A C G T C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATGACCAATT-----
ATAAACAATTAAACA
C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

JUN::JUNB/MA1132.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATGACCAATT
GATGACTCAT-
A C G T C T G A A G C T C A T G C T G A G A T C A G T C C G T A C G T A G A C T C G A T
C A T G T C G A C A G T A C T G C T G A A T G C C A G T G T A C G C T A G A C T A C G T