Information for 25-CACACACACACA (Motif 37)

A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
Reverse Opposite:
C A G T A T C G G C A T C T A G C G A T T A C G G C A T T C A G C G A T T C A G C A G T T C A G
p-value:1e-3
log p-value:-7.009e+00
Information Content per bp:1.613
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.34%
Number of Background Sequences with motif541.0
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets92.5 +/- 55.8bp
Average Position of motif in Background103.2 +/- 75.4bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CACACACACACA
AGCGGCACACACGCAA-
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

KLF9/MA1107.2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CACACACACACA
CAGCCACACCCACCCC
A C G T A C G T A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
T G A C T C G A T A C G T G A C A G T C T G C A T A G C T C G A A T G C T G A C A G T C G T C A A G T C G T A C A G T C T G A C

ZSCAN4/MA1155.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CACACACACACA-
TGCACACACTGAAAA
A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CACACACACACA
GGACACACCCCC-
A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACACACACACA
CRCCCACGCA--
A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CACACACACACA
CGAAGCACACAAAATA-
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACACACACACA
GTACACTCAC-----
A C G T A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CACACACACACA
GGCCACACCCAN---
A C G T A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

KLF10/MA1511.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACACACACACA
GCCACACCCCC---
A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
T C A G G T A C G T A C T C G A G T A C C T G A T A G C A G T C A G T C G T A C G A T C A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CACACACACACA
GCCACACCCA----
A C G T A C G T A G T C G T C A A G T C G C T A A G T C C G T A A T G C G C T A G A T C C G T A T A G C G T C A
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T