Information for 25-CTCTCAGAGGGG (Motif 24)

A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C G T A G T C A C G T A C T G C G T A A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.187e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CTCTCAGAGGGG--
--CHCAGCRGGRGG
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCTCAGAGGGG
-DCTCAGCAGG-
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTCTCAGAGGGG-
-RHHCAGAGAGGB
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T
A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

ZIC5/MA1584.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTCAGAGGGG-----
-GCNCAGCGGGGGGTCN
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T G A C C T G A A G T C T C G A T C A G G A T C C T A G A C T G C A T G A C T G A C T G C A T G A G C T T G A C A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTCAGAGGGG----
-NCGCAGCGGGGGGTC
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTCAGAGGGG----
-DCHCAGCAGGRGGCC
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCTCAGAGGGG-----
TGCGCATAGGGGAGGAG
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCTCAGAGGGG---
CTCCCTGGGAGGCCN
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTCTCAGAGGGG----
--CACAGCGGGGGGTC
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTCTCAGAGGGG----
-NCNCAGCGGGGGGTC
A G T C A C G T A G T C A C G T A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C