Information for 2-TCCAACGAGC (Motif 9)

A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C T G A C T G C G T A
p-value:1e-3
log p-value:-8.879e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets127.0 +/- 0.0bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TCCAACGAGC--
--GTACGTGCCC
A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TCCAACGAGC-
------CAGCC
A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCCAACGAGC
AGCCAATCGG-
A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

NFYB/MA0502.2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCCAACGAGC
NTGGCCAATGAG-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T

NFYA/MA0060.3/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCAACGAGC
AACCAATCAGA
A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

NFYC/MA1644.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCCAACGAGC
AGCCAATCAGA
A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCCAACGAGC
HTTTCCCASG---
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TCCAACGAGC--
GGGTCCAAAGGTCAC
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

MYC/MA0147.3/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCCAACGAGC--
GGCCACGTGCCC
A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCCAACGAGC-----
TTGACCGAGAATTCC
A C G T A G T C A G T C C G T A C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C