Information for 12-AWAGTTAATT (Motif 13)

C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T
Reverse Opposite:
C T G A C G T A A C G T A C G T C G T A C G T A A G T C C G A T C G T A A C G T
p-value:1e-7
log p-value:-1.792e+01
Information Content per bp:1.914
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif113.6
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets80.7 +/- 36.4bp
Average Position of motif in Background103.9 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx3/MA0135.1/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--AWAGTTAATT-
GATTAATTAATTT
A C G T A C G T C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

NR1I3/MA1534.1/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AWAGTTAATT
AAAGTTCAT-
C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AWAGTTAATT----
NNNTTAGTTAACTNANN
A C G T A C G T A C G T C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0123.1_Obox3/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AWAGTTAATT-------
ATAGTTAATCCCCCNNA
C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

ZNF652/MA1657.1/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AWAGTTAATT
GAAAGAGTTAAA-
A C G T A C G T A C G T C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AWAGTTAATT------
GATAATTAATCCCTCTT
A C G T C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

PH0074.1_Hoxd1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AWAGTTAATT------
NNNAGCTAATTAGCTTA
A C G T C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A

ESX1/MA0644.1/Jaspar

Match Rank:8
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AWAGTTAATT---
---GNTAATTGGN
C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G C T C G A T C T G A C T G A C A G T A G C T C T A G C T A G A G C T

PH0142.1_Pou1f1/Jaspar

Match Rank:9
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AWAGTTAATT----
GANTTAATTAATTANNN
A C G T A C G T A C G T C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T A C G T A C G T A C G T
T A C G G C T A G A T C G C A T C G A T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G T C A G C T A A G C T G A T C

RAX/MA0718.1/Jaspar

Match Rank:10
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AWAGTTAATT---
---NTTAATTGNN
C G T A C G A T C G T A A C T G A C G T A C G T C G T A C G T A A C G T A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G A C T G C A T C G T A C G T A C A G T C G A T C T A G T C A G A G T C