Information for 11-AACGTGAAGC (Motif 26)

C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A G T C C G T A A G T C A C T G A C G T A C G T
p-value:1e-3
log p-value:-8.381e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AACGTGAAGC
GGGTACGTGC---
A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AACGTGAAGC
CACGTG----
C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AACGTGAAGC
RTACGTGC---
A C G T C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AACGTGAAGC
----NGAAGC
C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AACGTGAAGC
GGACGTGC---
A C G T C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACGTGAAGC
NCACGTGACN-
A C G T C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACGTGAAGC
TACGTGCV--
C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACGTGAAGC
NVCACGTG----
A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AACGTGAAGC
ATCACGTGAT--
A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C
C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:10
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------AACGTGAAGC----
NTNNTNGTCACGTGACNNNTNC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C A C T G A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C