Information for 21-GCAATTCAGAAA (Motif 24)

A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.760e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets156.0 +/- 0.0bp
Average Position of motif in Background187.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0063.1_Hoxb8/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCAATTCAGAAA
ACCGGCAATTAATAAA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCAATTCAGAAA--
AATCAATTCAATAATT
A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCAATTCAGAAA-
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GCAATTCAGAAA-
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

Hmx1/MA0896.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAATTCAGAAA-
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCAATTCAGAAA-
ACAAGCAATTAATGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAATTCAGAAA-
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAATTCAGAAA-
ACAAGCAATTAAAGAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

ZBTB26/MA1579.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCAATTCAGAAA----
-TACTCCAGAAAAGAT
A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCAATTCAGAAA---
---RHHCAGAGAGGB
A C T G A G T C C G T A C G T A A C G T A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G