Information for 3-CGCAGAAACA (Motif 7)

A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T G C A T A C G T A G T C A C G T A C T G T G A C A C T G
p-value:1e-6
log p-value:-1.531e+01
Information Content per bp:1.944
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.5 +/- 39.5bp
Average Position of motif in Background18.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CGCAGAAACA---
--NAGAAACAGNN
A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGCAGAAACA-
AAACAGAAGCAG
A C G T A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCAGAAACA-
SCCTAGCAACAG
A C G T A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Stat5b/MA1625.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGCAGAAACA
CATTTCCCAGAAATC
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A
A G T C C T G A G C A T A G C T C G A T G A T C G A T C G T A C C T G A A C T G C T G A T C G A T C G A G C A T T A G C

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCAGAAACA-
---GTAAACAA
A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A A C G T
A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A

FOXL1/MA0033.2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CGCAGAAACA
---GTAAACA
A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A
A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CGCAGAAACA---
---GTAAACAWBN
A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGCAGAAACA---
--AATAAACAATN
A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A A C G T A C G T A C G T
A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCAGAAACA-
-CCAGGAACAG
A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGCAGAAACA
-AAATAAACA
A G T C A C T G A G T C C G T A A C T G C G T A C G T A C G T A A G T C G T C A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A