Information for 25-AGGGATGCATGT (Motif 28)

C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T A C T G A G T C C G T A A C G T A G T C A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.926e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background5.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGGATGCATGT-
SCAGYCADGCATGAC
A C G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AGGGATGCATGT--
----ATGMATATDC
C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGGGATGCATGT
CCWGGAATGY----
A C G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGGATGCATGT
TGGAATGYRG--
C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T
G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G A C G T A C G T

MXI1/MA1108.2/Jaspar

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AGGGATGCATGT---
-----NNCATGTGNN
C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C

TEAD3/MA0808.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGGATGCATGT
TGGAATGT----
C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T
G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGGATGCATGT----
AAAATATGCATAATAAA
A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

PH0083.1_Irx3_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGGATGCATGT------
-AAAATACATGTAATACT
C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGGGATGCATGT--
GCAGCCAAGCGTGACN
A C G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PH0087.1_Irx6/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGGATGCATGT-----
ANTTNTACATGTANTTN
C G T A A C T G A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T