Information for 9-TGGGAAACCC (Motif 26)

A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G C T A G A C G T C G A T A C G T A G T C A G T C A G T C C G T A
p-value:1e-6
log p-value:-1.587e+01
Information Content per bp:1.938
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets137.5 +/- 30.4bp
Average Position of motif in Background93.3 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--TGGGAAACCC
CCTGGGAAAG--
A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C
A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGGGAAACCC
ATGTGGGAAA---
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TGGGAAACCC
CSTGGGAAAD--
A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TGGGAAACCC-
-GGAAATCCCC
A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TGGGAAACCC---
-GGGAAATCCCCN
A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGGGAAACCC--
--GGAAANCCCC
A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGGGAAACCC-
GGGGGAATCCCC
A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TGGGAAACCC--
--GGAAATTCCC
A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

NFKB2/MA0778.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGGAAACCC--
AGGGGATTCCCCT
A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGGGAAACCC--
AGGGGAATCCCCT
A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T