Information for 20-CCCAGGCAAATG (Motif 20)

A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C T G
p-value:1e-3
log p-value:-9.041e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background111.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCCAGGCAAATG-
--AAGGCAAGTGT
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCCAGGCAAATG--
-ATATGCAAATNNN
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

NFYB/MA0502.2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCCAGGCAAATG--
--NTGGCCAATGAG
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGGCAAATG
TGCCCAGNHW----
A C G T A C G T A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCAGGCAAATG--
--WATGCAAATGAG
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCAGGCAAATG
-ATATGCAAAT-
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCCAGGCAAATG
--TATGCAAATC
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

POU2F3/MA0627.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCAGGCAAATG-
AATATGCAAATAA
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCAGGCAAATG--
--TATGCWAATBAV
A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

EGR4/MA0733.1/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CCCAGGCAAATG
TTACGCCCACGCATTT-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G A C T G A G T C C G T A C G T A C G T A A C G T A C T G
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T A C G T