Information for 13-AATTCGTTGT (Motif 29)

C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A G T C A C T G C G T A C G T A A C G T A C G T
p-value:1e-3
log p-value:-7.447e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets145.0 +/- 0.0bp
Average Position of motif in Background116.7 +/- 74.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0005.1_Barhl1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AATTCGTTGT-
GNNTTAATTGGTTGTT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T
C A T G G C T A T G C A G A C T C G A T C G T A C G T A C G A T A G C T C T A G T A C G G A C T A G C T C A T G G A C T C A G T

PH0108.1_Msx3/Jaspar

Match Rank:2
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----AATTCGTTGT-
NNNTTAATTGGTTTTN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T
C G T A C G T A G T C A G A C T G A C T C G T A C G T A A C G T A G C T C T A G T A C G A C G T G A C T C A G T A G C T A C T G

PH0006.1_Barhl2/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----AATTCGTTGT-
NNNTTAATTGGTTTTT
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATTCGTTGT------
ANTCCTTTGTCTNNNN
C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:5
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AATTCGTTGT
ACTCCTAATTAGTCGT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

PH0028.1_En1/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AATTCGTTGT-
GNATTAATTAGTTNNC
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T
A C T G G A T C T G C A G A C T G A C T C G T A C G T A A G C T A G C T C T G A C T A G A C G T A C G T A G T C A T C G A G T C

PH0008.1_Barx2/Jaspar

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATTCGTTGT-
TAAGTAATTAGTTATA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AATTCGTTGT------
NNNTCCTTTGTTCTNNN
A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX18/MA1563.1/Jaspar

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AATTCGTTGT-
---GCATTGTN
C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G

PH0106.1_Msx1/Jaspar

Match Rank:10
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AATTCGTTGT-
NNATTAATTAGTNGNN
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C T G A C G T A C G T
C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A