Information for 15-AAACCCGTCA (Motif 28)

C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T
p-value:1e-3
log p-value:-7.875e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets174.0 +/- 0.0bp
Average Position of motif in Background112.5 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAACCCGTCA----
AAAGACCTGTCAATCC
A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAACCCGTCA-
AAAACCGGTTTT
A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

PH0104.1_Meis2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAACCCGTCA----
AAAGACCTGTCAATAC
A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PKNOX2/MA0783.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAACCCGTCA
TGACACCTGTCA
A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AAACCCGTCA----
TTGAAAACCGTTAATTT
A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAACCCGTCA----
AATTACCTGTCAATAC
A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PB0045.1_Myb_1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAACCCGTCA----
ATGGAAACCGTTATTTT
A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

TFCP2/MA0145.3/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAACCCGTCA
AAACCGGTTT
C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A
T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAACCCGTCA----
AACGAGCTGTCAATAC
A C G T A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

GRHL2/MA1105.2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAACCCGTCA-
NAAACCTGTTTN
A C G T C G T A C G T A C G T A A G T C A G T C A G T C A C T G A C G T A G T C C G T A A C G T
G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T