Information for 23-CATTACTTTAAT (Motif 25)

A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A C G T A C G T A A C T G A C G T C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.929e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background101.0 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:CATTACTTTAAT
------TTTAAT
A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATTACTTTAAT------
-ANTAATTTTATGGCCGN
A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PH0095.1_Lhx5/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATTACTTTAAT---
CGAATTAATTAAATACT
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CATTACTTTAAT--
--TTAATTNAATTA
A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G T A C G T A A C G T A G C T T G C A C T G A C G T A A C G T A C G T C G T A

PH0093.1_Lhx3/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CATTACTTTAAT---
GAAATTAATTAAATAAT
A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T A C G C G A T G T C A T C G A G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A C G T A C G A T G T C A G T C A A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CATTACTTTAAT-----
NNTTCCTTTGATCTNNA
A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C A G T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CATTACTTTAAT-----
NNTTCCTTTGATCTANA
A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G A T A G C T A G T C A G T C G C A T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T C T G A

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CATTACTTTAAT---
----ATATTAATTAA
A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATTACTTTAAT-
TACTAAGTACTTAAATG
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CATTACTTTAAT-
TTTTAAGTACTTAAATT
A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T C G T A C G T A A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T