Information for 16-AACCCTAAAA (Motif 32)

T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A
Reverse Opposite:
A C G T A C G T G A C T C G A T C G T A T A C G C A T G C A T G G C A T A C G T
p-value:1e-5
log p-value:-1.238e+01
Information Content per bp:1.656
Number of Target Sequences with motif84.0
Percentage of Target Sequences with motif8.28%
Number of Background Sequences with motif2337.4
Percentage of Background Sequences with motif4.94%
Average Position of motif in Targets97.6 +/- 58.1bp
Average Position of motif in Background101.1 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.51
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACCCTAAAA----
AGAGCCATAAAATTCG
A C G T A C G T T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A A C G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AACCCTAAAA--
NGYCATAAAWCH
T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AACCCTAAAA
VGCCATAAAA
T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AACCCTAAAA
AACCGANA--
T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A
C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACCCTAAAA
AAAACCTCAAAT
A C G T A C G T T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AACCCTAAAA
AAACCGCAA--
A C G T T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACCCTAAAA-
AGTCGTAAAAA
T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A A C G T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AACCCTAAAA
KGCCATAAAA
T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACCCTAAAA-
-GTCATAAAAN
T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AACCCTAAAA--
ATGGAAACCGTTATTTT
A C G T A C G T A C G T A C G T A C G T T G C A C G T A G T A C G T A C A T G C G C A T G C T A C T G A T G C A T G C A A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T