Information for 1-ACAGTGAAATGA (Motif 1)

C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A
Reverse Opposite:
C G A T A G T C C G T A A C G T A G C T C G A T G T A C C G T A A G T C A C G T T A C G C G A T
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif294.5
Percentage of Background Sequences with motif0.57%
Average Position of motif in Targets129.5 +/- 56.4bp
Average Position of motif in Background99.7 +/- 82.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTGAAATGA--
NNNTTAGTTAACTNANN
A C G T A C G T A C G T C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACAGTGAAATGA---
---GWAAYHTGABMC
C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACAGTGAAATGA----
-TAATTCAATGAAGTG
C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACAGTGAAATGA-
---GTGGGGTGAT
C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:ACAGTGAAATGA-
----TTTAATGAN
C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:6
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ACAGTGAAATGA---
-----ATAATGAGGT
C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

PH0167.1_Tcf1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ACAGTGAAATGA--
NTTTTAGTTAACNNAGN
A C G T A C G T A C G T C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACAGTGAAATGA-
---ATGGGGTGAT
C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

ZBTB32/MA1580.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACAGTGAAATGA
TGTACAGTAT-----
A C G T A C G T A C G T C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A
G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T A C G T A C G T A C G T A C G T A C G T

USF1/MA0093.3/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACAGTGAAATGA---
-NNGTCACATGACNN
C G T A A T G C C G T A A C T G A C G T A C T G C G T A C T G A G T C A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A