Information for 11-GGGTAGCCCC (Motif 27)

A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G A G T C A C G T C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.092e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background141.0 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0156.1_Plagl1_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGGTAGCCCC----
NNNNGGTACCCCCCANN
A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGTAGCCCC
GGGGGAATCCCC
A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGGTAGCCCC-
AGGGGAATCCCCT
A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

Plagl1/MA1615.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGGTAGCCCC----
-NNTGGCCCCAGNN
A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGTAGCCCC
GGAAATCCCC
A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGGTAGCCCC-
AGGGGAATCCCCT
A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGTAGCCCC---
TTGGGGGCGCCCCTAG
A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZNF682/MA1599.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGTAGCCCC---
CGGGCCAAGCCCCTAT
A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGTAGCCCC--
GGGAAATCCCCN
A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGGTAGCCCC
CGTGGGTGGTCC-
A C G T A C G T A C G T A C T G A C T G A C T G A C G T C G T A A C T G A G T C A G T C A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T