Information for 19-CGGGACGT (Motif 42)

A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T A G T C A G T C A G T C A C T G
p-value:1e-5
log p-value:-1.193e+01
Information Content per bp:1.530
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets84.6 +/- 46.2bp
Average Position of motif in Background90.4 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGGGACGT--
NNGCACGTNC
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGGGACGT-
-BGCACGTA
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGGACGT
--TGACGT
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGGACGT--
--GGACGTGC
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HES6/MA1493.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGGACGT---
-GGCACGTGTT
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGGACGT-
-ATGACGTA
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

HES7/MA0822.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CGGGACGT----
TGGCACGTGCCA
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

HES5/MA0821.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGGACGT----
TGGCACGTGCCG
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

CREB3L4/MA1474.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGGGACGT----
GGTGACGTGGCN
A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C A G A G C T A T C G T C G A A G T C T C A G A G C T C A T G C A T G G T A C T C G A

TFDP1/MA1122.1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGGGACGT
GGGCGGGAAGG
A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A A G T C A C T G A C G T
T A C G T A C G T A C G G A T C T A C G T A C G A T C G C T G A T G C A T A C G T A C G