Information for 4-CAATGTGCCG (Motif 11)

A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G
p-value:1e-3
log p-value:-9.053e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAATGTGCCG
NNCATGTGNN-
A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAATGTGCCG
GACAATGNN---
A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------CAATGTGCCG-
NNTNNACAATGGGANNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAATGTGCCG
AAACAATGGCA--
A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAATGTGCCG--
--CTGTTCCTGG
A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G A C G T A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Dmrt1/MA1603.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CAATGTGCCG
GATACAAAGTATC-
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CAATGTGCCG
KCCACGTGAC-
A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAATGTGCCG--
--NANTGCSGCA
A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G A C G T A C G T
A C G T A C G T G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A

SOX2/MA0143.4/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAATGTGCCG
AAACAATGGAA--
A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T

ZFP57/MA1583.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAATGTGCCG----
-GCATTGCCGCAGT
A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T