Information for 9-CTGCTATTCATC (Motif 9)

A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G
p-value:1e-5
log p-value:-1.187e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTCATC-
GYCTGGYYTNTGTCA
A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGCTATTCATC-
-RGCCATYAATCA
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C A C G T
A C G T C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTGCTATTCATC-----
---ACATTCATGACACG
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTATTCATC-----------
AACTCCTAYTCATCCTTCAAAACCC
A C G T A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C A C G T A G T C A G T C A C G T C G T A A G C T C G A T A G T C C G T A G A C T A G T C A G T C G A C T C A G T A G T C G T C A C T G A C T G A C T G A G T A C A G T C A G T C

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGCTATTCATC-
---NTATYGATCH
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGCTATTCATC-
---YCATCMATCA
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGCTATTCATC
NCTGTCAATCAN-
A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTGCTATTCATC--
--GCTATTTATAGC
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C A C G T A C G T
A C G T A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGCTATTCATC
-GHATATKCAT-
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGCTATTCATC
CGGCTGTTCC--
A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T A G T C C G T A A C G T A G T C
G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C A C G T A C G T