Information for 1-CCGTCATTGG (Motif 5)

A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T A C T G C G T A A G T C A C T G A C T G
p-value:1e-3
log p-value:-9.011e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCGTCATTGG-----
---TGATTGGCTANN
A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.2/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CCGTCATTGG----
--CTCATTGGCCAG
A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

NFYC/MA1644.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCGTCATTGG--
-NCTGATTGGNN
A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCGTCATTGG--
--CCGATTGGCT
A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

NR1H4/MA1110.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCATTGG
NAGGTCATTGA
A C G T A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

NFYA/MA0060.3/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCGTCATTGG--
-NCTGATTGGNN
A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

YY2/MA0748.2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCGTCATTGG
CGCCGCCATNN-
A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCGTCATTGG
NTTATTCGTCATNC-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

Atf1/MA0604.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCATTGG
TACGTCAT---
A C G T A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCGTCATTGG-
-GNTAATTGGN
A G T C A G T C A C T G A C G T A G T C C G T A A C G T A C G T A C T G A C T G A C G T
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G