| p-value: | 1e-5 |
| log p-value: | -1.371e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.33% |
| Number of Background Sequences with motif | 0.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 100.7 +/- 26.7bp |
| Average Position of motif in Background | 92.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 3.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GTCTCTCATATT TGTCTGDCACCT- |
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PKNOX1/MA0782.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GTCTCTCATATT NNGCTGTCACTCANN-- |
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SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GTCTCTCATATT CTGTCTGTCACCT- |
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PB0106.1_Arid5a_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTCTCTCATATT----- TNNTTTCGTATTNNANN |
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Arid5a/MA0602.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GTCTCTCATATT------ ----CTAATATTGCTAAA |
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|
|
PB0002.1_Arid5a_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | GTCTCTCATATT------ ----CTAATATTGCTAAA |
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PBX3/MA1114.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------GTCTCTCATATT NNNCCTGTCACTCANNN- |
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Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GTCTCTCATATT NCTGTCAATCAN--- |
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PAX3(var.2)/MA1546.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GTCTCTCATATT-- CCGTCACGCTAATTAA |
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Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GTCTCTCATATT-- --GKVTCADRTTWC |
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