Information for 16-CGGTACTCAG (Motif 22)

A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G C T G A A C T G A C G T C G T A A G T C A G T C C T A G
p-value:1e-6
log p-value:-1.386e+01
Information Content per bp:1.935
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif23.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets109.2 +/- 47.6bp
Average Position of motif in Background110.5 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGGTACTCAG--
ACTCCAAGTACTTGGAA
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGGTACTCAG
AAGCACTTAA
A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

MSANTD3/MA1523.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGTACTCAG
GTACACTCAC
A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGGTACTCAG---
CGAACAGTGCTCACTAT
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGTACTCAG-
AGCCACTCAAG
A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGTACTCAG
--GTAAACAG
A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G
A C G T A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CGGTACTCAG--
NDGTAAACARRN
A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G A C G T A C G T
G C A T C T A G T C A G A C G T C G T A C G T A C G T A A G T C C G T A T C A G T C A G C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGTACTCAG
MRSCACTYAA
A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGGTACTCAG---
TACTAAGTACTTAAATG
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G A C G T A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CGGTACTCAG---
---TGCCCAGNHW
A G T C A C T G A C T G A C G T C G T A A G T C A G C T A G T C C G T A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A