Information for 3-GGTCGTTA (Motif 37)

A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A G T C A C T G C G T A A G T C A G T C
p-value:1e-2
log p-value:-5.888e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif108.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background110.8 +/- 121.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA9/MA0594.2/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:GGTCGTTA---
-GTCGTAAACG
A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

HOXC11/MA0651.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GGTCGTTA---
GGTCGTAAAAT
A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

Hoxa11/MA0911.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGTCGTTA----
GGTCGTAAAATT
A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

NR1H4/MA1110.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GGTCGTTA-
NAGGTCATTGA
A C G T A C G T A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTCGTTA---
GGTCGTAAAAA
A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A

PH0067.1_Hoxc12/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGTCGTTA------
TTAGGTCGTAAAATTTC
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

HOXA4/MA1496.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GGTCGTTA-
-GTCATTAG
A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T
A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGTCGTTA------
TAAGGTCGTAAAATCCT
A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

HOXD10/MA1506.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGTCGTTA---
GGTCGTAAAAC
A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C

HOXB9/MA1503.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GGTCGTTA---
-GTCGTAAAAT
A C T G A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C G T A C G T A C G T
A C G T T C A G A G C T A G T C T C A G A C G T G C T A C G T A G T C A G C T A G A C T