Information for 3-ATTADAGGDTAB (Motif 6)

C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
Reverse Opposite:
T A G C C G A T G T C A G C T A A G T C A G T C C G A T G A C T C G A T C G T A C T G A A G C T
p-value:1e-7
log p-value:-1.642e+01
Information Content per bp:1.712
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif35.71%
Number of Background Sequences with motif558.7
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets70.8 +/- 64.7bp
Average Position of motif in Background105.2 +/- 73.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTADAGGDTAB
NNCTAATGGNN--
A C G T C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATTADAGGDTAB
NNTTGAGGTTNN
C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:ATTADAGGDTAB---
----AAGGATATNTN
C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATTADAGGDTAB
NBYCAAGGTCAC
C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ATTADAGGDTAB
GKBCARAGGTCA-
A C G T C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ATTADAGGDTAB
---TRAGGTCA-
C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATTADAGGDTAB
ANGNAAAGGTCA-
A C G T C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ATTADAGGDTAB-
--CAAAGGTCAAA
C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G A C G T
A C G T A C G T G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATTADAGGDTAB---
TCTCAAAGGTCACGAG
A C G T C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

PH0080.1_Hoxd8/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ATTADAGGDTAB
TAAATAATTAATGGCTA-
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T C G T A C G T A C G T A A C T G A C T G C A G T A C G T C G T A A C T G
C A G T G C T A C T G A C G A T G A C T G C T A C G T A C G A T G C A T C G T A G C T A G A C T C T A G C T A G G A T C C G A T G C T A A C G T