Information for 18-TGCCTGCCAG (Motif 23)

A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G
Reverse Opposite:
G T A C C G A T C T A G A C T G A G T C C T G A C T A G A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.701e+01
Information Content per bp:1.880
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.47%
Number of Background Sequences with motif120.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets116.3 +/- 49.9bp
Average Position of motif in Background101.0 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGCCTGCCAG
TTCCCGCCWG
A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G
A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:forward strand
Alignment:TGCCTGCCAG--
----TGCCAGCB
A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCCAG
TTGCGTGCVA-
A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TGCCTGCCAG-
--CGTGCCAAG
A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGCCTGCCAG
--CTTGGCAA
A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGCCTGCCAG
TGGCAGNCTGCCAG
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCCAG-
NTGATTGACAGN
A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCCTGCCAG-
BTGABTGACAGS
A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCCTGCCAG
VDTTTCCCGCCA-
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T

E2F6/MA0471.2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCCTGCCAG-
NNTTCCCGCCNNN
A C G T A C G T A C G T A C T G A G T C A G T C A G C T A C T G A G T C A G T C C G T A A C T G A C G T
A T G C A G T C A G C T A G C T A T G C T A G C G A T C C A T G A T G C A G T C G A T C A G T C A T G C