Information for 22-ACAATGTATGGA (Motif 21)

C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A C G T C G T A A G T C C G T A A C G T A C G T A C T G A C G T
p-value:1e-4
log p-value:-9.847e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACAATGTATGGA
AAACAATGGAA---
A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ACAATGTATGGA
GACAATGNN----
A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ACAATGTATGGA
AAACAATGGCA---
A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACAATGTATGGA
GATACAAAGTATC--
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.64
Offset:-7
Orientation:forward strand
Alignment:-------ACAATGTATGGA
TCACGGAACAATAGGTG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ACAATGTATGGA
-CCATATATGG-
C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:7
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----ACAATGTATGGA
YDGHTACAWTGTADC--
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACAATGTATGGA---
CCATTGTATGCAAAT
C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGTATGGA
GHWACAWTGTWDCWA
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACAATGTATGGA
VRAACAATGG-----
A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C T G A C G T C G T A A C G T A C T G A C T G C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T A C G T A C G T