Information for 24-TAACATAAAGCA (Motif 25)

A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C G T A C T G A C G T A C G T C G T A
p-value:1e-3
log p-value:-8.178e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets137.0 +/- 0.0bp
Average Position of motif in Background29.7 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX2/MA1113.2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:TAACATAAAGCA--
-GTCATAAATCATT
A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
A C G T T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAACATAAAGCA---
NNCCATAAATCATNN
A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAACATAAAGCA--
-GTCATCAATCATT
A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
A C G T C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAACATAAAGCA--
AAACAGACAAAGGAAT
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TAACATAAAGCA
NGYCATAAAWCH
A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAACATAAAGCA-
-NCYATMAATCAY
A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A A C G T
A C G T T A C G G A T C G A T C C T G A A G C T G T C A G C T A T C G A C G A T G A T C G C T A G A C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TAACATAAAGCA
GGCCATAAATCA
A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Stat2/MA1623.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAACATAAAGCA
AGAAACAGAAACT-
A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TAACATAAAGCA
--TCATCAATCA
A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

NFIL3/MA0025.2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TAACATAAAGCA
NNATTGCATAANN--
A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A C G T A C G T A A C T G A G T C C G T A
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A A C G T A C G T