Information for 2-TGAGCCCCBCTD (Motif 2)

A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
Reverse Opposite:
G A C T C G T A C T A G T C G A C T A G A C T G A C T G A T C G T G A C C G A T A G T C C G T A
p-value:1e-5
log p-value:-1.242e+01
Information Content per bp:1.738
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif918.5
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets74.8 +/- 42.2bp
Average Position of motif in Background98.4 +/- 78.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0162.1_Six2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCCCCBCTD
ANANGTGATACCCCATT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCCCCBCTD
ANANGTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCCCCBCTD
ANANGTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCCCCBCTD
ANANNTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCCCCBCTD
ANANNTGATACCCNATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCCCCBCTD-
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCCCCBCTD
ANNNATGATACCCCATC
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGCCCCBCTD
AATNTTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAGCCCCBCTD
TGGGGCCCAC--
A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TGAGCCCCBCTD
TGTCGTGACCCCTTAAT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C G T A C A G T C A G T C A C G T A G T C A C G T C G T A
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T