Information for 3-CTTTTTTTCG (Motif 7)

A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C T G
p-value:1e-3
log p-value:-9.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background193.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CTTTTTTTCG----
TTTTTTTTCNNGTN
A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

ZNF384/MA1125.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTTTTTTTCG--
TTTTTTTTTANN
A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T
C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

PB0186.1_Tcf3_2/Jaspar

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTTTCG---
NNTTTNTTTTNGNNN
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G T A C G A T A G C T C G A T A C G T C G A T C G A T C G A T A G C T G C A T T A G C A T C G T A C G A T G C G A C T

MEF2A/MA0052.4/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTTTTCG--
NNTCTATTTTTAGNN
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTTTTCG---
TTCTATTTTTAGNNN
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTTTTTTTCG---
GNATTTTTTTTTTGANC
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C T A G G C T A C T G A A C G T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A T C A G T C A T G T G C A T C G A G T A C

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTTTTTTTCG---
NNNNTTTTTTTTTNAAC
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTTTCG-
TCTATTTATAGN
A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTTTTTTCG-
GCTATTTTTAGC
A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PB0032.1_IRC900814_1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTTTTTTTCG-----
GNNATTTGTCGTAANN
A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T