Information for 14-CGATCACAATGC (Motif 18)

A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T A C G T A C T G A C G T A C T G C G T A A C G T A G T C A C T G
p-value:1e-4
log p-value:-9.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX18/MA1563.1/Jaspar

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:CGATCACAATGC
----CACAATGC
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CGATCACAATGC-
----GACAATGNN
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGATCACAATGC--
---AAACAATGGCA
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

SOX2/MA0143.4/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CGATCACAATGC--
---AAACAATGGAA
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGATCACAATGC
--VRRACAAWGG
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGATCACAATGC
--RNAACAATGG
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGATCACAATGC---
CTCACACAATGGCGC
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGATCACAATGC
--VRAACAATGG
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGATCACAATGC-
-BMRVACAAWGGV
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C A C G T
A C G T A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGATCACAATGC
-GTAAACAAT--
A G T C A C T G C G T A A C G T A G T C C G T A A G T C C G T A C G T A A C G T A C T G A G T C
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T