Information for 25-AATGAATAACCT (Motif 33)

C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T
p-value:1e-3
log p-value:-7.714e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background111.9 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AATGAATAACCT
-ATGAATATTC-
C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATGAATAACCT
-ATGMATATDC-
C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AATGAATAACCT
TTAATNATTAAC--
A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C A C G T A C G T

HNF1A/MA0046.2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AATGAATAACCT
AGTTAATGATTAACT-
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------AATGAATAACCT
ACTATGAATGAATGAT--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T A C G T A C G T

HNF1B/MA0153.2/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATGAATAACCT
GTTAATNATTAAC--
A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
C T A G A G C T G A C T C T G A G T C A G C A T A T G C C G T A C A G T G A C T C G T A T C G A G T A C A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AATGAATAACCT
TTAATGTTTAACC-
A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T

ONECUT1/MA0679.2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AATGAATAACCT
AAAAAATCAATAAATA
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

NR1H4/MA1110.1/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AATGAATAACCT-
--TCAATGACCTA
C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

PH0172.1_Tlx2/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATGAATAACCT
TAATTAATTAATAACTA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A C G T C G T A C G T A A G T C A G T C A C G T
A C G T G C T A C T G A C G A T G A C T C G T A C G T A G A C T G A C T C T G A C G T A G C A T C G T A C T G A G A T C C G A T C G A T