Information for 15-TGTGTCTTGGCA (Motif 19)

A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C C G T A C G T A A C T G C G T A A G T C C G T A A G T C C G T A
p-value:1e-4
log p-value:-9.619e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets152.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TGTGTCTTGGCA--
---TACTTGGCAGA
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TGTGTCTTGGCA--
----NNTTGGCANN
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----TGTGTCTTGGCA
NNTGTTTATTTTGGCA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TGTGTCTTGGCA-
-----CTTGGCAA
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TGTGTCTTGGCA--
-----NTTGGCANN
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGTGTCTTGGCA---
TGTTKCCTAGCAACM
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

SMAD5/MA1557.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGTGTCTTGGCA
--TGTCTAGACA
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A
A C G T A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

ATF6/MA1466.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TGTGTCTTGGCA-
TGATGACGTGGCAG
A C G T A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T
A G C T A C T G T C G A A G C T A C T G C T G A A G T C C T A G A G C T C T A G C A T G G T A C C T G A A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGTGTCTTGGCA
--WDNCTGGGCA
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGTGTCTTGGCA
--TGTCTAGACG
A C G T A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A
A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G