Information for 1-GAGTCAAGCG (Motif 1)

A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C G T A C G T A C T G C G T A A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.182e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GAGTCAAGCG
AAAAGTCAA---
A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

BATF3/MA0835.2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAAGCG
NATGAGTCATN--
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A A C G T A C G T

BATF::JUN/MA0462.2/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAAGCG
NATGAGTCATN--
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A A C G T A C G T

BATF/MA1634.1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAAGCG
NATGAGTCATN--
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGTCAAGCG
-AGTCACGC-
A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAAGCG
GATGAGTCAT---
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T A C G T

FOSL1/MA0477.2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCAAGCG
NNATGAGTCATNN-
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
C T A G C T A G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A A C G T

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCAAGCG
NNATGAGTCATNNN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCAAGCG
GATGAGTCATCC-
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C A C G T

FOS::JUND/MA1141.1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAGTCAAGCG
GGATGAGTCATCG-
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C C G T A C G T A A C T G A G T C A C T G
A C T G C A T G T C G A A G C T A C T G G T C A T C A G A C G T G T A C C G T A A G C T T G A C T A C G A C G T