Information for 10-TTTTWRGG (Motif 35)

A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G
Reverse Opposite:
G A T C A T G C A G T C C G T A G C T A G T C A G C T A T G C A
p-value:1e-1
log p-value:-4.411e+00
Information Content per bp:1.625
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.65%
Number of Background Sequences with motif738.9
Percentage of Background Sequences with motif1.55%
Average Position of motif in Targets96.5 +/- 59.0bp
Average Position of motif in Background102.2 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTTTWRGG-
TTTTATKRGG
A C G T A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

HOXD12/MA0873.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG---
NTTTTACGACT
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T A C G T
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG--
NTTTTACGAC
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG---
NTTTTACGACC
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXA13/MA0650.2/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTTWRGG-
GTTTTATTGGN
A C G T A C G T A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

HOXC11/MA0651.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG---
NTTTTACGACC
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXD10/MA1506.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG---
NTTTTACGACC
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T A C G T
C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

HOXC9/MA0485.2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG--
NTTTTACGAC
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXB9/MA1503.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG--
NTTTTACGAC
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXC13/MA0907.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTWRGG---
NTTTTACGAGN
A C G T C G A T A C G T C G A T G C A T T C A G A T C G C T A G A C G T A C G T A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C