Information for 14-TTGGGCCAATTT (Motif 12)

A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T A C T G A C T G A G T C A G T C A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.079e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGGGCCAATTT-
-NTGGCCAATGAG
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

Plagl1/MA1615.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGGGCCAATTT
CCCTGGGGCCAGG--
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGGGCCAATTT----
NTNAGNTAATTACCTN
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGGGCCAATTT-
---AGCCAATCGG
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTGGGCCAATTT
-CGTGCCAAG--
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGGGCCAATTT
-GGTGCCAAGT-
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTGGGCCAATTT
BTGACCTAVTTW
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

PH0079.1_Hoxd3/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTGGGCCAATTT----
TTGAGTTAATTAACCT
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

MSX2/MA0708.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TTGGGCCAATTT-
-----CCAATTAA
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

PH0109.1_Nkx1-1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGGGCCAATTT------
-TGCGCTAATTAGTGGGA
A C G T A C G T A C T G A C T G A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T T A C G G T A C T C A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G C T C A T G T A C G A C T G T C G A