Information for 23-GGTTGTTAAAGG (Motif 26)

A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.424e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets89.0 +/- 0.0bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC11/MA0651.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGTTGTTAAAGG
GGTCGTAAAAT-
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTTGTTAAAGG
GGTCGTAAAATT
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTTGTTAAAGG
GGTCGTAAAAA-
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTTGTTAAAGG
GNCTATAAAAGG
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGTTGTTAAAGG-----
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

SRY/MA0084.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGTTGTTAAAGG
-ATTGTTTAN--
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTTGTTAAAGG
-GTCGTAAAAA-
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T

HOXD10/MA1506.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGTTGTTAAAGG
GGTCGTAAAAC-
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C A C G T

MYBL1/MA0776.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTTGTTAAAGG-
-ACCGTTAACGGT
A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T
A C G T C T G A G T A C T A G C C A T G A G C T G C A T C G T A C T G A A G T C A T C G A C T G G A C T

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GGTTGTTAAAGG-
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A