Information for 20-GGTGGAACAA (Motif 40)

A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A G T C A G T C C G T A A G T C A G T C
p-value:1e-3
log p-value:-6.984e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background75.1 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GGTGGAACAA
--TGGAAAA-
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GGTGGAACAA---
---GGAACAAAGR
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGTGGAACAA------
NNNNNGAACAATTGANN
A C G T A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTGGAACAA---
---RNAACAATGG
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGTGGAACAA-------
-AATGAACAATGGAATT
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGTGGAACAA--
--TGGAACAGMA
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

SOX8/MA0868.2/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGTGGAACAA---
---AGAACAATGG
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTGGAACAA
AATGGAAAAT
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GGTGGAACAA-
-----AACAAT
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTGGAACAA
NNTGGAAANN
A C T G A C T G A C G T A C T G A C T G C G T A C G T A A G T C C G T A C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T