Information for 2-CGAAATTG (Motif 31)

A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A A C G T A C G T A C G T A G T C A C T G
p-value:1e-2
log p-value:-5.060e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif87.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background100.8 +/- 108.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGAAATTG-------
-AAAATTGTTATGAA
A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGAAATTG-------
GGAAAAATTGTTAGGAA
A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

IRF6/MA1509.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CGAAATTG
ACCGAAACT-
A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T

DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGAAATTG
SSTAATTA
A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G
A T G C T A C G A G C T T G C A C G T A C G A T A C G T C T G A

Dlx4/MA0881.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGAAATTG-
-NTAATTGN
A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CGAAATTG--
CGTATCGAAACCAAA
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

MSX1/MA0666.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGAAATTG-
-NTAATTGG
A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T
A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G

DLX6/MA0882.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGAAATTG-
-NTAATTGN
A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

Dlx3/MA0880.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGAAATTG-
-NTAATTGN
A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T
A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGAAATTG-
-NTAATTGG
A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C T G A C G T
A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G