Information for 14-CTGTAGCACTCA (Motif 21)

A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A
Reverse Opposite:
A C G T A C T G C T G A A C T G A C G T A C T G A G T C A C G T C G T A A G T C C G T A A C T G
p-value:1e-6
log p-value:-1.465e+01
Information Content per bp:1.960
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets105.4 +/- 28.7bp
Average Position of motif in Background91.0 +/- 48.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR1/MA1542.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTGTAGCACTCA
NACAGTAGCN----
A C G T A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTGTAGCACTCA-
---AAGCACTTAA
A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTGTAGCACTCA--
---AGCCACTCAAG
A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

NKX2-5/MA0063.2/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTGTAGCACTCA---
----ACCACTCAAAA
A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

PB0050.1_Osr1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTGTAGCACTCA
ATTTACAGTAGCAAAA-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CTGTAGCACTCA
ATGTACAGTAGCAAAG-
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTGTAGCACTCA-
---AASCACTCAA
A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGTAGCACTCA-
---MRSCACTYAA
A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

DMRTA2/MA1478.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGTAGCACTCA
AATGTAACAATT-
A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A
T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTAGCACTCA
AATGTATCAAT--
A C G T A G T C A C G T A C T G A C G T C G T A A C T G A G T C C G T A A G T C A G C T A G T C G T C A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T