Information for 2-TTAATCAAACAA (Motif 5)

A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.112e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXE1/MA1487.1/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TTAATCAAACAA-
CCTTAAATAAACAAT
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTAATCAAACAA-
GGGTTTAATTAAAATTC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
T A C G A C T G A C T G G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A G T C A G A C T G C A T G A T C

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TTAATCAAACAA-
-CCATCAATCAAA
A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

PHOX2B/MA0681.2/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TTAATCAAACAA---
TTTAATCAAATTATAT
A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTAATCAAACAA--
--AAACAAACATTC
A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----TTAATCAAACAA-
CGAATTAATTAAATACT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
T A G C C T A G G C T A C T G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C T A G C A T G T C A G T A C A G C T

FOXD2/MA0847.2/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TTAATCAAACAA
GTTAAGTAAACAA
A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A
T A C G G A C T G C A T T C G A G C T A T C A G G A C T G T C A T G C A C G T A A G T C C G T A G C T A

PH0091.1_Lhx1/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTAATCAAACAA-
CGAATTAATTAATAATG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
T G A C T C A G C G T A C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G C A T G C T A G C T A G A C T A C T G

PH0100.1_Lmx1a/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTAATCAAACAA-
CGAATTAATTAAAAACC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
T A G C T A C G G C T A C G T A G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G T A G C T A G C T A G A T C A G T C

PH0101.1_Lmx1b/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTAATCAAACAA-
NNAATTAATTAAAAANN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A C G T A A G T C C G T A C G T A A C G T
T G A C C T G A G C T A C G T A A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G T A G C T A G C T A G A T C A G C T