Information for 6-AACCCTAATGGT (Motif 7)

C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A A C G T A C G T C T G A A C T G A C T G A C T G A C G T A C G T
p-value:1e-14
log p-value:-3.444e+01
Information Content per bp:1.950
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.4 +/- 36.9bp
Average Position of motif in Background71.5 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AACCCTAATGGT-
--NNCTAATGGNN
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AACCCTAATGGT--
----NTAATKGTTT
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AACCCTAATGGT----
--CCTTAATNGNTTTT
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

BARX1/MA0875.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AACCCTAATGGT
----NTAATTGN
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

VENTX/MA0724.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AACCCTAATGGT-
----CTAATCGNT
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AACCCTAATGGT
----CTAATKGV
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

BARX2/MA1471.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:AACCCTAATGGT----
----NTAATGGTTTTN
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G G C A T C T G A G T C A A G C T A C T G C T A G A C G T G C A T C G A T G C A T G A C T

HOXA4/MA1496.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AACCCTAATGGT
----NTAATGAC
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C

HOXB4/MA1499.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AACCCTAATGGT
----NTAATGAT
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T

HOXC4/MA1504.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AACCCTAATGGT
----NTAATGAN
C G T A C G T A G T A C A G T C A G T C A G C T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C