Information for 15-AGTCAGATGGCT (Motif 23)

C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C C G T A A C G T A G T C A C G T A C T G C G T A A G T C A C G T
p-value:1e-5
log p-value:-1.367e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.3 +/- 45.1bp
Average Position of motif in Background62.9 +/- 51.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGTCAGATGGCT-
GGACAGATGGCAG
C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGTCAGATGGCT
-AACAGATGGC-
C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGTCAGATGGCT---
AAGGCCAGATGGTCCGG
A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGATGGCT
GGAACAGATGGCA
A C G T C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

HAND2/MA1638.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGTCAGATGGCT
-ACCAGATGGC-
C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T
A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T

USF1/MA0093.3/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAGATGGCT-
NNGTCACATGACNN
A C G T C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTCAGATGGCT
-AACAGATGGT-
C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

USF2/MA0526.3/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGTCAGATGGCT-
NNGTCACATGACNN
A C G T C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTCAGATGGCT
-AACAKATGGY-
C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T
A C G T C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGTCAGATGGCT
VNAVCAGCTGGC-
A C G T C G T A A C T G A C G T A G T C C G T A A C T G C G T A A C G T A C T G A C T G A G T C A C G T
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T