Information for 15-CTGTAAGTGTGT (Motif 20)

A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T
Reverse Opposite:
G T C A A G T C G T C A A G T C C G T A A G T C A C G T A C G T C G T A A G T C C G T A A C T G
p-value:1e-7
log p-value:-1.699e+01
Information Content per bp:1.911
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets90.6 +/- 48.6bp
Average Position of motif in Background98.9 +/- 77.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-2/MA0122.3/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGTAAGTGTGT--
-NTTAAGTGGTTNN
A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T A C G T A C G T
A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTGTAAGTGTGT
--TTAAGTGGT-
A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T
A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGTAAGTGTGT
--TTAAGTGC--
A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTGTAAGTGTGT---
TTTTCAGTGTGTGCA
A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T A C G T A C G T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTGTAAGTGTGT---
NTNNTTAAGTGGTTANN
A C G T A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTGTAAGTGTGT
--TTAAGTGCTT
A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T
A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGTAAGTGTGT---
NTNNTTAAGTGGNTNAN
A C G T A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTAAGTGTGT
-NTCAAGTGGN-
A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

ELF1/MA0473.3/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGTAAGTGTGT
AAACAGGAAGTGGG-
A C G T A C G T A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T
C T G A C T G A T G C A T A G C T G C A A T C G C T A G T G C A C G T A T C A G C G A T T C A G T C A G T A C G A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGTAAGTGTGT
ACAGGAAGTG---
A C G T A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T