Information for 13-GCTGGTGCACAT (Motif 24)

A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A G T C C G T A A G T C A G T C C G T A A C T G A G T C
p-value:1e-8
log p-value:-1.922e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.8 +/- 22.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCTGGTGCACAT----
TACATGTGCACATAAAA
A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGTGCACAT---
NNGTATGTGCACATNNN
A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGTGCACAT
SDGCAGGTGCNS--
A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

TCF4/MA0830.2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGTGCACAT
NNGGCAGGTGCNN--
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCTGGTGCACAT
NNGGCAGGTGCNN--
A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G A C G T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGTGCACAT
RGCAGGTGYA---
A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T A C G T A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCTGGTGCACAT
AACAGGTGCA---
A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T A C G T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTGGTGCACAT
GGCAGGTGCA---
A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T A C G T A C G T

TCF3/MA0522.3/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGTGCACAT
NNGCAGGTGNN---
A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCTGGTGCACAT
NNGCAGGTGNN---
A C G T A C G T A C T G A G T C A C G T A C T G A C T G A C G T A C T G A G T C C G T A A G T C C G T A A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T A C G T A C G T