Information for 24-CTTTTGAATGGA (Motif 32)

A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G
p-value:1e-3
log p-value:-7.768e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background100.1 +/- 39.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTTTTGAATGGA
-ATTTGAATT--
A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTTTTGAATGGA----
ACTATGAATGAATGAT
A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTTTTGAATGGA--
NNNTTGAGTGGNNN
A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTGAATGGA--
NNNTATTGAATTGNNN
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTTTGAATGGA
-NNTTGAGTGNN
A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A
A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

NFYC/MA1644.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTTTTGAATGGA-
--NCTGATTGGNN
A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTGAATGGA
NNTNTCATGAATGT-
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTGAATGGA---
NTTNTATGAATGTGNNC
A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTTTTGAATGGA
---TTGATTGN-
A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CTTTTGAATGGA-
--NCTGATTGGNN
A G T C A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T