Information for 17-ACATACACATAC (Motif 18)

C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C
Reverse Opposite:
A C T G A C G T T C G A G A C T A T C G C G A T T A C G C G A T C T G A C A G T C T A G C G A T
p-value:1e-10
log p-value:-2.317e+01
Information Content per bp:1.764
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.74%
Number of Background Sequences with motif619.2
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets86.4 +/- 47.9bp
Average Position of motif in Background106.8 +/- 76.6bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACATACACATAC-
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACATACACATAC---
AYATGYATATGCATR
C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C A C G T A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACATACACATAC-
ATATGCAAATNNN
C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACATACACATAC-
NNTATANATATACN
A C G T C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACATACACATAC
ATATGCAAAT--
C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:ACATACACATAC
ATATGCAAATT-
C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACATACACATAC
--ATGMATATDC
C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

POU2F3/MA0627.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-ACATACACATAC
AATATGCAAATAA
A C G T C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C
G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACATACACATAC
--ATTTGCATA-
C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C
A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:ACATACACATAC
--ATTTGCATA-
C G T A A G T C G T C A G A C T C G T A A T G C G C T A T A G C C T G A A G C T G T C A A G T C
A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T