Information for 5-GCAGGTTCGA (Motif 10)

A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A C G T A A G T C A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.980e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF3/MA0522.3/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTTCGA
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGTTCGA
NNGGCAGGTGCNN
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF4/MA0830.2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGTTCGA
NNGGCAGGTGCNN
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTTCGA
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAGGTTCGA
GGCAGGTGCA-
A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTTCGA
SDGCAGGTGCNS
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:7
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCAGGTTCGA---
ATCCACAGGTGCGAAAA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTTCGA
RGCAGGTGYA-
A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGTTCGA
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGTTCGA
CGCAGCTGCG-
A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T A G T C A C T G C G T A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T