Information for 21-GCAAAGGACATG (Motif 33)

A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.076e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background149.4 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCAAAGGACATG
-CAAAGGTCAG-
A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GCAAAGGACATG
TAGGGCAAAGGTCA--
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCAAAGGACATG
ANGNAAAGGTCA--
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCAAAGGACATG--
TCTCAAAGGTCACGAG
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

NR4A1/MA1112.2/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCAAAGGACATG
TTAAAGGTCAAA
A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCAAAGGACATG
TGGGGCAAAGGTCA--
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCAAAGGACATG--
TCTCAAAGGTCACCTG
A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:8
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGGACATG
VNAGGKCAAAGGTCA--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCAAAGGACATG--
---AAGGATATNTN
A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAGGACATG
GTAGGGCAAAGGTCA--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G C G T A A G T C C G T A A C G T A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T