Information for 11-GCACACCATA (Motif 27)

A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C T G A C T G A C G T A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.234e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif23.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets14.0 +/- 0.0bp
Average Position of motif in Background112.2 +/- 123.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GCACACCATA--
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCACACCATA
ATCACCCCAT-
A C G T A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCACACCATA
ATCACCCCAT-
A C G T A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCACACCATA--
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCACACCATA-----
---CACCATATGGCG
A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCACACCATA
NTCACACCTN-
A C G T A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A
A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCACACCATA
ATCACCCCAC-
A C G T A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCACACCATA----
----ACCATATGTT
A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

OLIG2/MA0678.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCACACCATA----
----ACCATATGGT
A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCACACCATA
TTCACACCTT-
A C G T A C T G A G T C C G T A A G T C C G T A A G T C A G T C C G T A A C G T C G T A
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T