Information for 19-AGCACCCCGA (Motif 36)

C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G A C T G A C T G A C G T A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.142e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background107.7 +/- 52.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGCACCCCGA--------
GAAGTANCACGAATNMRAGT
A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCACCCCGA----
AAGCCCCCCAAAAAT
A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----AGCACCCCGA---
NNNNGGTACCCCCCANN
A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCACCCCGA
AAGACCCYYN
C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGCACCCCGA-
TTGGGGGCGCCCCTAG
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCACCCCGA-----
AGGAGACCCCCAATTTG
A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AGCACCCCGA----
---ACCCGGATGTA
C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGCACCCCGA----
CCCCCCCCCCCACTTG
A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCACCCCGA---
ATCCCCGCCCCTAAAA
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A A C G T A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--AGCACCCCGA
AGACCACCCASR
A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A G T C A G T C A C T G C G T A
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G