Information for 8-ATTTTATTCG (Motif 17)

C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C G T C G T A C G T A C G T A C G T A A C G T
p-value:1e-3
log p-value:-8.658e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background187.5 +/- 3.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.2/Jaspar

Match Rank:1
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTATTCG--
NNATTTTATTGGNN
A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTATTCG---
NNAATTTTATTGGNTN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTATTCG---
NNANTTTTATTGGNNN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:ATTTTATTCG-
-TTTTATKRGG
C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:ATTTTATTCG-
-TTTTATTRGN
C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T
A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTATTCG---
NTNAATTTTATTGNATT
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:ATTTTATTCG-
GTTTTATTGGN
C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTTTATTCG
NTTTTATDRG
C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G

PH0046.1_Hoxa10/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTATTCG---
TNAATTTTATTACCTN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTTTATTCG
NTTTTATGAC
C G T A A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C T G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C