| p-value: | 1e-15 |
| log p-value: | -3.679e+01 |
| Information Content per bp: | 1.974 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.82% |
| Number of Background Sequences with motif | 2.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 90.3 +/- 33.5bp |
| Average Position of motif in Background | 139.5 +/- 25.7bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CDX2/MA0465.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC-- --NTTTTATTGCNN |
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PH0013.1_Cdx2/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC---- NAATTTTATTACCNNN |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC --NTTTTATGAC |
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HOXD9/MA0913.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC --NTTTTATTGC |
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|
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CDX4/MA1473.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC- --GTTTTATTGCC |
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|
|
PH0046.1_Hoxa10/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AGAATTTATTCC--- TNAATTTTATTACCTN |
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|
HOXA10/MA0899.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC- --NTTTTATTACN |
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|
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PH0124.1_Obox5_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC----- NANANTTAATCCCNNNN |
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|
CDX1/MA0878.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC- --GTTTTATGGCC |
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|
PH0012.1_Cdx1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGAATTTATTCC---- NAATTTTATTACCTNN |
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