Information for 21-TCCATTTTGTGG (Motif 19)

A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C T G A C T G C G T A
p-value:1e-4
log p-value:-9.702e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background114.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TCCATTTTGTGG
GCNGCCATCTTG---
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCCATTTTGTGG----
----NNHTGTGGTTWN
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCATTTTGTGG-
NNNCCATTGTGTNAN
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCCATTTTGTGG---
----GTCTGTGGTTT
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

SOX2/MA0143.4/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTTTGTGG
NNCCATTGTNN--
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTTTGTGG
NNCCATTGTNN--
A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------TCCATTTTGTGG-
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCATTTTGTGG
BCCWTTGTBYKV
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCATTTTGTGG
-CCATTGTTYB-
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TCCATTTTGTGG---
-----NNTGTGGTTT
A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T