Information for 9-CACCCAACGT (Motif 30)

A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T A C G T A C T G A C T G A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.146e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif10.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets148.0 +/- 0.0bp
Average Position of motif in Background117.5 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CACCCAACGT
ACCACTCAAAA-
A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACCCAACGT
ATCACCCCAC--
A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CACCCAACGT
TAACCACTCAAGAA
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Klf1/MA0493.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACCCAACGT
GGCCACACCCA----
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CACCCAACGT
GCCACACCCA----
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CACCCAACGT
CNGTCACGCCAC--
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CACCCAACGT
AGCCACTCAAG--
A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CACCCAACGT
GGCCACACCCAN---
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:9
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------CACCCAACGT
ANNTNCCCACCCANNAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACCCAACGT
TBGCACGCAA---
A C G T A C G T A C G T A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C A C T G A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T