Information for 19-GGCATTGGAC (Motif 35)

A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A C G T A A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-6.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background108.0 +/- 63.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCATTGGAC--
CTCATTGGCCAG
A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGCATTGGAC--
GGGATTGCATNN
A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGCATTGGAC-------
-NNATTGGACTTTNGNN
A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCATTGGAC
TGACCTTGAN-
A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCATTGGAC--
GCTGACCTTGAACTN
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCATTGGAC
CCGATTGGCT
A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCATTGGAC
NGTGGGCAT-----
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCATTGGAC
GGTTGGCAT-----
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCATTGGAC---
-TGATTGGCTANN
A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCATTGGAC--
AGGTCANTGACCTN
A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C