Information for 23-GTGTATGAGC (Motif 35)

A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C C G T A A C G T C G T A A G T C C G T A A G T C
p-value:1e-2
log p-value:-6.785e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif44.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets26.0 +/- 0.0bp
Average Position of motif in Background109.0 +/- 107.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGTATGAGC---
NAATTTTACGAGNTNN
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGTATGAGC
AGGGTAACAGC
A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTGTATGAGC
NTTTTACGAGN
A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTGTATGAGC---
ANATTTTACGAGNNNN
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGTATGAGC--
GCGCATGCGCAC
A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GTGTATGAGC-
------CAGCC
A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTGTATGAGC
TTTTATKRGG
A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GTGTATGAGC
AATGTATCAAT
A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTATGAGC--
NTTNTATGAATGTGNNC
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGTATGAGC
NNTGTGGATTSS-
A C G T A C G T A C G T A C T G A C G T A C T G A C G T C G T A A C G T A C T G C G T A A C T G A G T C
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T