Information for 3-AGCCCGCT (Motif 34)

C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C T G A C T G A C T G A G T C A C G T
p-value:1e-2
log p-value:-5.294e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif538.1
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background100.1 +/- 186.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AGCCCGCT---
GCGCCCCCTGNN
A C G T C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGCCCGCT----
--CCTGCTGAGH
C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCCCGCT
AGCGCGCC
C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCCGCT
CAGCC----
A C G T C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCCCGCT---
NNCCTGCTGNG
C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGCCCGCT----
GGTCCCGCCCCCTTCTC
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCCCGCT
CTGCCCGCA
A C G T C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCCCGCT--
TACCCGCATN
C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCCCGCT-----
TCGTACCCGCATCATT
A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCCCGCT
TWVGGTCCGC-
A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A C T G A G T C A C G T
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T