Information for 7-CAACATGGGT (Motif 29)

A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C C G T A A C G T A C T G A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.913e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background139.8 +/- 131.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CAACATGGGT--
CAAGATGGCGGC
A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

ZFP42/MA1651.1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CAACATGGGT-------
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAACATGGGT
GCAACAGGTG-
A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T
A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T

SCRT2/MA0744.2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAACATGGGT--
AAAGCAACAGGTGGTT
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T

SCRT1/MA0743.2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAACATGGGT--
AATTCAACAGGTGGTT
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACATGGGT
GACACATGGC-
A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

GLI2/MA0734.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAACATGGGT-----
CGNCGTGGGTGGTCN
A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAACATGGGT--
CAAGATGGCGGC
A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

CLOCK/MA0819.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAACATGGGT-
-AACACGTGTT
A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CAACATGGGT-
CAATGCATTGTGGGTA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A A C G T A C T G A C T G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A