Information for 9-GACACTTGATTT (Motif 12)

A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A C G T A G T C
p-value:1e-10
log p-value:-2.484e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets96.2 +/- 34.0bp
Average Position of motif in Background99.3 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GACACTTGATTT
-CCACTTGAA--
A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GACACTTGATTT-
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GACACTTGATTT-
TAAGCCACTTGAATTT
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GACACTTGATTT-
TAAGCCACTTGAAATT
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GACACTTGATTT
ACCACTTGAA--
A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GACACTTGATTT--
ATAACCACTTGAAAATT
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

TFE3/MA0831.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GACACTTGATTT
--CACGTGAC--
A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C A C G T A C G T

MITF/MA0620.3/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GACACTTGATTT--
NNNNGTCACGTGACNNNN
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A T C A G A G C T T A G C G C T A A G T C T C A G C G A T A T C G T C G A A G T C G A C T G C A T G C A T C G T A

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GACACTTGATTT
GTCACGTGAT--
A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GACACTTGATTT
--TAATTGATTA
A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A