| p-value: | 1e-4 |
| log p-value: | -9.941e+00 |
| Information Content per bp: | 1.659 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 40.00% |
| Number of Background Sequences with motif | 1854.2 |
| Percentage of Background Sequences with motif | 2.25% |
| Average Position of motif in Targets | 119.0 +/- 66.8bp |
| Average Position of motif in Background | 99.2 +/- 79.6bp |
| Strand Bias (log2 ratio + to - strand density) | -2.0 |
| Multiplicity (# of sites on avg that occur together) | 1.25 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
| Match Rank: | 1 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAATCCTKCAMM NYTAATCCYB---- |
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OTX2/MA0712.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAATCCTKCAMM NNCTAATCCCNN--- |
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PITX1/MA0682.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATCCTKCAMM CTAATCCC----- |
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HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CAATCCTKCAMM YCATCMATCA-- |
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|
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OTX1/MA0711.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CAATCCTKCAMM TTAATCCG----- |
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|
|
PH0138.1_Pitx2/Jaspar
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------CAATCCTKCAMM GNNNATTAATCCCTNCN- |
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|
|
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAATCCTKCAMM TAATCCCN---- |
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|
|
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAATCCTKCAMM GCTAATCC------ |
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|
|
PITX3/MA0714.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAATCCTKCAMM CTTAATCCC----- |
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GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAATCCTKCAMM YTAATCCY----- |
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