Information for 11-GCAGGCGATG (Motif 28)

A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A G T C A C T G A G T C A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.027e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background87.2 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCGATG
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCGATG
NNGGCAGGTGCNN
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF3/MA0522.3/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCGATG
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T

TCF4/MA0830.2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCGATG
NNGGCAGGTGCNN
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCGATG
SDGCAGGTGCNS
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

ZEB1/MA0103.3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCAGGCGATG
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAGGCGATG
CACAGCAGGGG---
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCGATG
NNCAGGTGNN-
A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCAGGCGATG
TGCGCAGGCGC--
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGCGATG
RGCAGGTGYA-
A C G T A C T G A G T C C G T A A C T G A C T G A G T C A C T G C G T A A C G T A C T G
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A A C G T