Information for 11-CGGATATTTTAA (Motif 12)

A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A G T C A C T G
p-value:1e-3
log p-value:-8.994e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGGATATTTTAA--
--KCTATTTTTRGH
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGATATTTTAA
AAGGATATNTN--
A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGGATATTTTAA--
--GCTATTTTTAGC
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2A/MA0052.4/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGATATTTTAA---
NNTCTATTTTTAGNN
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGATATTTTAA----
-TTCTATTTTTAGNNN
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGATATTTTAA-----
-NANTATTATAATTNNN
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGATATTTTAA-
---CTATTTTTGG
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGATATTTTAA-----
-NCGTATTATAATCNTA
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

LIN54/MA0619.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGGATATTTTAA--
-----ATTTGAATT
A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGATATTTTAA
ACCCGGATGTA----
A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T C G T A C G T A
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T A C G T A C G T