Information for 14-GDTCACATGAAA (Motif 15)

A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T G T A C C G T A A C G T A C T G A C G T A C T G C T G A G A T C A G T C
p-value:1e-7
log p-value:-1.633e+01
Information Content per bp:1.908
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets142.6 +/- 46.1bp
Average Position of motif in Background134.0 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.3/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GDTCACATGAAA-
NNGTCACATGACNN
A C G T A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

USF1/MA0093.3/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GDTCACATGAAA-
NNGTCACATGACNN
A C G T A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GDTCACATGAAA-
-VSCACATCAAAG
A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T
A C G T T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G

E-box(bHLH)/Promoter/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GDTCACATGAAA
CCGGTCACGTGA--
A C G T A C G T A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GDTCACATGAAA
-GTCACATGAY-
A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A
A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

MXI1/MA1108.2/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GDTCACATGAAA
-GACACATGGC-
A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A
A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

MITF/MA0620.3/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GDTCACATGAAA---
TAAAGTCACGTGACTTTA
A C G T A C G T A C G T A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G C A T C G T A C G T A C T G A T C A G A G C T T A G C G C T A A G T C T C A G C G A T A T C G T C G A A G T C G A C T G C A T G C A T C G T A

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GDTCACATGAAA
BRGTCACGTGAC-
A C G T A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A
A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.65
Offset:6
Orientation:forward strand
Alignment:GDTCACATGAAA
------ATTAAA
A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GDTCACATGAAA
GGTCACGTGA--
A C T G C A T G A G C T A G T C C G T A A G T C C G T A A C G T A C T G C G T A C G T A C G T A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T