Information for 3-GAGGGAAATGKK (Motif 3)

A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
Reverse Opposite:
G T A C G T A C G A T C C G T A G C A T C G A T C G A T G T A C G T A C G T A C A C G T G T A C
p-value:1e-5
log p-value:-1.309e+01
Information Content per bp:1.656
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif2148.8
Percentage of Background Sequences with motif2.83%
Average Position of motif in Targets117.8 +/- 57.2bp
Average Position of motif in Background100.3 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGGGAAATGKK
NNGGGGAATNC-
A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

GFY(?)/Promoter/Homer

Match Rank:2
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAGGGAAATGKK--
--GGGAATTGTAGT
A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G A C G T A C G T
A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAAATGKK
GGAGGGGGAA---
A C G T A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAGGGAAATGKK
-AAGGATATNTN
A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAGGGAAATGKK
GGCGGGAARN---
A C G T A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAAATGKK
TTGAGTGSTT----
A C G T A C G T A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAAATGKK
TGGCGGGAAAHB--
A C G T A C G T A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGGGAAATGKK
ATGTGGGAAA----
A C G T A C G T A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAGGGAAATGKK--
TAGGGCAAAGGTCA
A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

MSANTD3/MA1523.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGAAATGKK
GTGAGTGNAC----
A C G T A C G T A C T G C G T A A C T G A C T G A C T G G C T A C G T A C G T A C G A T C A T G A C T G A C T G
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T A C G T A C G T