Information for 1-TGAGCATAGG (Motif 5)

A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C G T A C T G A G T C A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.018e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1756.4
Percentage of Background Sequences with motif1.25%
Average Position of motif in Targets114.0 +/- 48.6bp
Average Position of motif in Background102.0 +/- 95.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCATAGG
ATTTGCATA--
A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TGAGCATAGG--
--ANCATATGGT
A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

POU5F1B/MA0792.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCATAGG
ATTTGCATA--
A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAGCATAGG--
--AACATATGTT
A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCATAGG
BTVATTWGCATA--
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGAGCATAGG---
-AAACATATGTTT
A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAGCATAGG--
--ACCATATGGT
A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

ATOH7/MA1468.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGAGCATAGG--
--AACATATGTC
A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T T C G A T G C A A G T C C T G A A G C T T G C A A C G T A C T G A C G T G A T C

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGAGCATAGG--
--ACCATATGTT
A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

NEUROD2/MA0668.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGAGCATAGG--
--ACCATATGGC
A C G T A C T G C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C