Information for 21-AGACTTGTCTAG (Motif 22)

C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A C G T
p-value:1e-4
log p-value:-9.244e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets80.0 +/- 0.0bp
Average Position of motif in Background44.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:AGACTTGTCTAG-
-----TGTCTAGA
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

SMAD3/MA0795.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:AGACTTGTCTAG---
-----TGTCTAGACG
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AGACTTGTCTAG---
-----TGTCTAGACA
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:AGACTTGTCTAG
----TWGTCTGV
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGACTTGTCTAG
NNACTTGCCTT-
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGACTTGTCTAG-----
NNTNNTGTCTGGNNTNG
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGACTTGTCTAG--
AAAATTGTTATGAA
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGACTTGTCTAG
----CTGTCTGG
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AGACTTGTCTAG--
TAGAANVTTCTAGAA
A C G T C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGACTTGTCTAG
--VBSYGTCTGG
C G T A A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C T G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G