Information for 18-TTGTTAAACTCA (Motif 26)

A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.918e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background41.3 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTAAACTCA
ATTGTTTAN----
A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TTGTTAAACTCA
----TGAACTCA
A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAAACTCA
ATTGTT-------
A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAAACTCA
ATTGTTA------
A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTGTTAAACTCA
GGTCGTAAAATT--
A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTGTTAAACTCA---
---AAAACCTCAAAT
A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

PB0065.1_Sox15_1/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TTGTTAAACTCA
ANNTCTATTGTTCNNNA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTAAACTCA
NCNTTTGTTATTTNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------TTGTTAAACTCA
GAAAACTAGTTAACATC-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTGTTAAACTCA-
---GTACACTCAC
A C G T A C G T A C T G A C G T A C G T C G T A C G T A C G T A A G T C A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C