Information for 11-GGACTTTAAATT (Motif 20)

A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A G T C
p-value:1e-3
log p-value:-9.074e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background43.1 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GGACTTTAAATT
NNATTGGACTTTNGNN-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGACTTTAAATT----
-GACTTTTAWTTTGAA
A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGACTTTAAATT
---ATTTGAATT
A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

HNF4G/MA0484.2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGACTTTAAATT
NNTGGACTTTGNN--
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GGACTTTAAATT
NNTGGACTTTGNN--
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGACTTTAAATT---
ACGGCCATAAAATTAAT
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGACTTTAAATT
AGGTCTCTAACC-
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGACTTTAAATT---
TGGACTTTGNNCTNTG
A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGACTTTAAATT-
GGAGGTCATTAATTAT
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGACTTTAAATT--
--ACTTTCACTTTC
A C T G A C T G C G T A A G T C A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C