Information for 3-GACCGTAG (Motif 40)

A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A C T G A C T G A C G T A G T C
p-value:1e-2
log p-value:-5.678e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif124.9
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets197.0 +/- 0.0bp
Average Position of motif in Background90.2 +/- 143.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR1/MA1542.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GACCGTAG--
NACAGTAGCN
A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G A C G T A C G T
G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GACCGTAG-----
ATTTACAGTAGCAAAA
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GACCGTAG-----
ATGTACAGTAGCAAAG
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACCGTAG---
-ATAGTAGGTG
A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GACCGTAG
NNTGACCTTTN
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCGTAG---
TGACCYYTGVYN
A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G A C G T A C G T A C G T
A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

NR2C1/MA1535.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GACCGTAG
NTGACCTCN-
A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G
C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GACCGTAG
CNNTTGACCTTTG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GACCGTAG
GCGGACCBWA-
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G
A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GACCGTAG-
TGGCAGTTGG
A C G T A C T G C G T A A G T C A G T C A C T G A C G T C G T A A C T G A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G