Information for 14-ACATAGGACT (Motif 30)

C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C T G A C G T
p-value:1e-3
log p-value:-6.990e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif38.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets190.0 +/- 0.0bp
Average Position of motif in Background93.1 +/- 115.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ACATAGGACT
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

NEUROG2/MA0669.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACATAGGACT
AACATATGTC-
A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------ACATAGGACT-
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACATAGGACT------
NNATTGGACTTTNGNN
C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACATAGGACT-
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SOX10/MA0442.2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACATAGGACT
AAAACAAAGAA--
A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T

NEUROG1/MA0623.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACATAGGACT
GACATATGTC-
A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T
T C A G T G C A A G T C C T G A A G C T C T G A A G C T A T C G A C G T A G T C A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACATAGGACT--
ACAAAGGNBCCT
C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACATAGGACT
NACATATGGN-
A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ACATAGGACT
AAAACAAAGG---
A C G T A C G T A C G T C G T A A G T C C G T A A C G T C G T A A C T G A C T G C G T A A G T C A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T