Information for 9-TCATAACGTGCT (Motif 11)

A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A G T C A C T G A C G T A C G T C G T A A C G T A C T G C G T A
p-value:1e-4
log p-value:-9.215e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF1A/MA1106.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCATAACGTGCT-
---GTACGTGCCC
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

MLX/MA0663.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCATAACGTGCT
--ATCACGTGAT
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

MLXIPL/MA0664.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TCATAACGTGCT
--ATCACGTGAT
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TCATAACGTGCT
---RTACGTGC-
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TCATAACGTGCT
----TACGTGCV
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCATAACGTGCT
--GTCACGTGAT
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T

BACH2(var.2)/MA1470.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCATAACGTGCT-----
AAAGCATGACGTCATGATTT
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A C G T T A G C C G T A C G A T C T A G C T G A A G T C A C T G A C G T A T G C G T C A A G C T A T C G T G C A G C A T G C A T C G A T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCATAACGTGCT
----CACGTG--
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCATAACGTGCT--
CCNNANCACGTGGTCN
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T
G T A C G T A C A G T C T A C G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T G T A C G T C A

ARNT2/MA1464.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCATAACGTGCT
--GTCACGTGCC
A C G T A G T C C G T A A C G T C G T A C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T C A G C G A T T G A C C T G A A G T C C T A G G A C T C A T G G T A C A T G C