Information for 17-CTTGGACCGT (Motif 30)

A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G
p-value:1e-3
log p-value:-7.875e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTGGACCGT----
NNATTGGACTTTNGNN
A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGACCGT
NTGACCTTTGACCTN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------CTTGGACCGT-
GTTGACCTTTGACCTTT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T A C G T
T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Stat5a/MA1624.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTTGGACCGT
NNTTCTTGGAAN--
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T
C T G A C G A T G A C T G C A T T G A C G A C T C G A T C T A G C A T G G C T A C T G A G C T A A C G T A C G T

OVOL2/MA1545.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTTGGACCGT------
---GTACCGTTATGTG
A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTTGGACCGT
TGACCTTTGACCTN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PPARD/MA1550.1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGACCGT-
NTGACCTTTGACCCCN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T A C G T
C A G T G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G A T C A G T C A G T C C G A T

TCF7L1/MA1421.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTTGGACCGT-
CCTTTGATCTTT
A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T A C G T
A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T

THRB/MA1574.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGGACCGT
NTGACCTTTGACCCC
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T
T C G A G A C T T C A G T G C A G T A C G T A C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTTGGACCGT---
NNTGGACTTTGNN
A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A