Information for 22-GGCTWAGCCC (Motif 34)

A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C
Reverse Opposite:
A C T G A T C G C T A G G T A C C G A T C G T A G T C A C T A G A G T C A T G C
p-value:1e-3
log p-value:-7.274e+00
Information Content per bp:1.763
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif528.8
Percentage of Background Sequences with motif1.10%
Average Position of motif in Targets92.8 +/- 54.1bp
Average Position of motif in Background100.5 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF682/MA1599.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GGCTWAGCCC----
CGGGCCAAGCCCCTAT
A C G T A C G T A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C A C G T A C G T A C G T A C G T
A G T C T C A G C T A G T C A G T A G C A G T C T G C A T G C A A C T G A G T C A G T C A T G C G T A C C G A T T C G A A G C T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCTWAGCCC
GGATTAGC--
A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCTWAGCCC-----
AGGCTAATCCCCAANG
A C G T A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCTWAGCCC
NGGATTAN---
A C G T A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGCTWAGCCC---
GNNAGCTAATCCCCCN
A C G T A C G T A C G T A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

MAFK/MA0496.3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCTWAGCCC---
NNTGCTGAGTCAGCN
A C G T A C G T A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C A C G T A C G T A C G T
C G T A C G A T C A G T A T C G T G A C G C A T C A T G C G T A T A C G A C G T T G A C C G T A A C T G A T G C C G T A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCTWAGCCC-
---TAATCCCN
A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTWAGCCC
NGCTN-----
A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

BACH1/MA1633.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCTWAGCCC--
NTGCTGAGTCATN
A C G T A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C A C G T A C G T
C G A T C G A T A T C G T G A C G A C T C A T G G C T A A T C G A C G T T G A C T C G A A G C T T A G C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTWAGCCC
-CTTAATCCC
A T C G C T A G A G T C A C G T G C A T C G T A C A T G A G T C A T G C G T A C
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C