Information for 5-CHCAYATA (Motif 22)

G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A
Reverse Opposite:
A C G T G C T A A C G T C T G A A C G T A C T G C A G T A C T G
p-value:1e-5
log p-value:-1.165e+01
Information Content per bp:1.736
Number of Target Sequences with motif214.0
Percentage of Target Sequences with motif22.81%
Number of Background Sequences with motif8139.7
Percentage of Background Sequences with motif17.27%
Average Position of motif in Targets102.7 +/- 53.0bp
Average Position of motif in Background99.9 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CHCAYATA-
NWAACCACADNN
A C G T A C G T A C G T G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CHCAYATA-
CCYMATAAAA
A C G T G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

SRF/MA0083.3/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CHCAYATA------
TGACCATATATGGTCA
A C G T A C G T G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CHCAYATA---
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C G T G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CHCAYATA--
NACATATGGN
G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T A C G T
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CHCAYATA-
AAACCACAGAN
A C G T A C G T G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

MXI1/MA1108.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CHCAYATA--
GACACATGGC
G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T A C G T
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CHCAYATA--
AACATATGTT
G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T A C G T
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CHCAYATA--
ACCATATGTT
G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T A C G T
T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

OLIG2/MA0678.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CHCAYATA--
ACCATATGGT
G T A C G T C A A G T C C G T A A G C T C G T A C G A T G T C A A C G T A C G T
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T