Information for 23-AGGGATGAGATT (Motif 27)

C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A G T C A C G T A G T C C G T A A C G T A G T C A G T C A G T C A C G T
p-value:1e-4
log p-value:-9.835e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background115.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGGGATGAGATT--
TAGAGGGATTAAATTTC
A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

OTX2/MA0712.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGGGATGAGATT
AAGGGATTAGAA-
A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

ZNF528/MA1597.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGGGATGAGATT--
CCCAGGGAAGCCATTTC
A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G A T C A G T C T G A C C T G A C T A G C T A G C T A G T C G A C T G A C T A G A G T C G T A C T C G A A G C T A G C T A G C T G A T C

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGGGATGAGATT-
--TGCTGTGATTT
C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

ZNF263/MA0528.2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGGATGAGATT
GGGGGGAGGAGG--
A C G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGGGATGAGATT--
NANAGGGATTAATTATN
A C G T A C G T A C G T C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGGGATGAGATT-
---GCAGTGATTT
C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGGATGAGATT
-NGGATTAN---
C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T
A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGGATGAGATT
NNGGATTAGN--
C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

GATA6/MA1104.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGGGATGAGATT-
NNAGATAAGATAN
C G T A A C T G A C T G A C T G C G T A A C G T A C T G C G T A A C T G C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A