Information for 13-CAAGACCAAGCT (Motif 15)

A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C T G
p-value:1e-4
log p-value:-9.369e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background179.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR6A1/MA1541.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAAGACCAAGCT---
GTCAAGTTCAAGGTCAA
A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CAAGACCAAGCT-
------CAAGCTT
A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAAGACCAAGCT-
CCAAGCCCAACCAG
A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAGACCAAGCT
CAAGGHCANV--
A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGACCAAGCT
NTCAAGGTCA----
A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAGACCAAGCT
BTCAAGGTCA----
A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAAGACCAAGCT
-GAGSCCGAGC-
A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAAGACCAAGCT
-AAAACAAAGG-
A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAAGACCAAGCT
GTCAAGGTCAC---
A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CAAGACCAAGCT
AAGTTCAAGGTCAGC--
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C C G T A C G T A A C T G A G T C A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T