Information for 10-GACAAACGAC (Motif 27)

A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.184e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background106.9 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GACAAACGAC-
AAACAGACAAAGGAAT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GACAAACGAC
AAAACAAAGG--
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GACAAACGAC
BMRVACAAWGGV-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACAAACGAC
RACAAWGG--
A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GACAAACGAC--
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GACAAACGAC
GAACAAAGGG-
A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GACAAACGAC
RNAACAATGG--
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GACAAACGAC
ATTTACGACAAATAGC
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GACAAACGAC--
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PH0044.1_Homez/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GACAAACGAC-----
NNTAAAAACGATGTTNT
A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A G T C A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A T C G A C T C G A T T C G A C G T A C G T A G C T A G C T A A G T C C A T G C G T A C G A T A C T G C G A T C G A T C G A T G C A T