| p-value: | 1e-3 |
| log p-value: | -6.935e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 17.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 183.0 +/- 0.0bp |
| Average Position of motif in Background | 135.7 +/- 93.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0121.1_Foxj3_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATGTTATGGC--- NNCTTTGTTTTGNTNNN |
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CDX1/MA0878.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATGTTATGGC- GTTTTATGGCC |
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PH0064.1_Hoxb9/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATGTTATGGC--- NGANTTTTATGGCTCN |
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PH0056.1_Hoxa9/Jaspar
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATGTTATGGC--- ANTAATTTTATGGCCGN |
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CDX4/MA1473.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATGTTATGGC- GTTTTATTGCC |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 6 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATGTTATGGC NTTTTATGAC |
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PB0120.1_Foxj1_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATGTTATGGC-- GTNTTGTTGTGANNT |
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HOXD9/MA0913.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATGTTATGGC NTTTTATTGC |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATGTTATGGC- -TTTTATGGCM |
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PB0122.1_Foxk1_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATGTTATGGC--- NNNTGTTGTTGTTNG |
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