Information for 4-GTATAACGAG (Motif 9)

A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C T G A C G T A C G T C G T A A C G T C G T A A G T C
p-value:1e-3
log p-value:-8.932e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets109.0 +/- 0.0bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTATAACGAG--
--ATAATGAGGT
A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTATAACGAG-
NTTTTACGAGN
A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXA9/MA0594.2/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTATAACGAG
NNTTTACGAC
A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTATAACGAG-----
AAACATAATGAGGTTGC
A C G T A C G T A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTATAACGAG----
GAATGACGAATAAC
A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTATAACGAG--
--NTAATGAGCT
A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTATAACGAG-----
GACGATAATGAGCTTGC
A C G T A C G T A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0048.1_Hoxa13/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTATAACGAG----
ANATTTTACGAGNNNN
A C G T A C G T A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTATAACGAG-
ANTTTTACGACC
A C G T A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G A C G T
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C

NKX6-3/MA1530.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTATAACGAG
-TTTAATGAN
A C T G A C G T C G T A A C G T C G T A C G T A A G T C A C T G C G T A A C T G
A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G