Information for 6-TCCTAAGCCT (Motif 15)

A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A C G T A C G T C G T A C T A G A C T G C G T A
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.962
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif32.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets100.5 +/- 42.4bp
Average Position of motif in Background107.2 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCCTAAGCCT
-GCTAATCC-
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TCCTAAGCCT---
--CTAATCCTCTT
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TCCTAAGCCT-
---TAATCCCN
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCCTAAGCCT-
-NYTAATCCYB
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCCTAAGCCT
-CTTAATCCC
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TCCTAAGCCT
--CNAGGCCT
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

PITX1/MA0682.2/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCCTAAGCCT
--CTAATCCC
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

OTX2/MA0712.2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCTAAGCCT--
NNCTAATCCCNN
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCCTAAGCCT
--CTAGGCCT
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCTAAGCCT
--ATAATCCC
A C G T A G T C A G T C A C G T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C