Information for 11-GCATTCAGTGAT (Motif 16)

A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-9.138e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCATTCAGTGAT---
NNCATTCATTCATNNN
A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

ZNF24/MA1124.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCATTCAGTGAT--
-CATTCATTCATTC
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C

PB0005.1_Bbx_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCATTCAGTGAT---
TAATTCAATGAAGTG
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

GFI1/MA0038.2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCATTCAGTGAT---
---TGCAGTGATTTN
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T A G G A T C G T C A A T C G C G A T C A T G C G T A C G A T A C G T A C G T T C A G

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATTCAGTGAT
-NNTTGAGTGNN
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T
A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCATTCAGTGAT---
--NTTAAGTGGTTNN
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GCATTCAGTGAT---
NNNANTGCAGTGCNNTT
A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCATTCAGTGAT--
--TTTGATTGATGN
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GCATTCAGTGAT-
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCATTCAGTGAT--
----GCAGTGATTT
A C T G A G T C C G T A A C G T A C G T A G T C C G T A A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T