Information for 4-GGTAATACCG (Motif 10)

A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T C G T A A C G T A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.718e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background125.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGTAATACCG
--TAATCCCN
A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTAATACCG
GGAAATTCCC
A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGTAATACCG
GGAAANCCCC
A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

PITX2/MA1547.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGTAATACCG
-ATAATCCC-
A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
A C G T G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGTAATACCG--
GNNAGCTAATCCCCCN
A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGTAATACCG
GGAAATCCCC
A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GGTAATACCG
NNNTTTNTAATACNG
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

DPRX/MA1480.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTAATACCG
AGATAATCCC-
A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C A C G T

PITX1/MA0682.2/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GGTAATACCG
-CTAATCCC-
A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGTAATACCG
CTTAATCCC-
A C T G A C T G A C G T C G T A C G T A A C G T C G T A A G T C A G T C A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T