| p-value: | 1e-10 |
| log p-value: | -2.529e+01 |
| Information Content per bp: | 1.859 |
| Number of Target Sequences with motif | 7.0 |
| Percentage of Target Sequences with motif | 0.95% |
| Number of Background Sequences with motif | 6.7 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 81.4 +/- 42.4bp |
| Average Position of motif in Background | 105.1 +/- 66.8bp |
| Strand Bias (log2 ratio + to - strand density) | 2.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0001.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ATATAGGTTAGT-- ---CAGGTAAGTAT |
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RORC/MA1151.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATATAGGTTAGT ATAAGTAGGTCA-- |
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RORB/MA1150.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATATAGGTTAGT AATTAGGTCAC- |
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RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATATAGGTTAGT-- AAWCTAGGTCARDNN |
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|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.58 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATATAGGTTAGT TATAAGTAGGTCAA- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATATAGGTTAGT AAYTAGGTCA-- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATATAGGTTAGT AAYTAGGTCA-- |
|
|
|
SD0002.1_at_AC_acceptor/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ATATAGGTTAGT-- ---AAGGCAAGTGT |
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|
|
GATA1/MA0035.4/Jaspar
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ATATAGGTTAGT- --NNAGATTAGAN |
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|
RORA/MA0071.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATATAGGTTAGT ATCAAGGTCA-- |
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