Information for 21-CTAACAAATATA (Motif 20)

A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T A C G T A C G T A C T G A C G T A C G T C G T A A C T G
p-value:1e-4
log p-value:-9.603e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background152.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CTAACAAATATA-
NNNTAACAATTATAN
A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CTAACAAATATA
AAAAATAACAAACGG-
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTAACAAATATA-
-AAACAAACATTC
A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTAACAAATATA
--AACAAT----
A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTAACAAATATA
NNCNNAACAATTNT-
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTAACAAATATA
AAATAAGAAAAAAC
A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTAACAAATATA--
TNCNNAACAATTTTTNC
A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0062.1_Sox12_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTAACAAATATA
NTTNAGAACAATTA--
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAACAAATATA
AAAACAAAGAA-
A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAACAAATATA
GTAAACAAT----
A C G T A G T C A C G T C G T A C G T A A G T C C G T A C G T A C G T A A C G T C G T A A C G T C G T A
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T