Information for 1-GCTGTGAC (Motif 5)

A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C
Reverse Opposite:
C T A G C G A T A G T C C G T A A G T C C G T A A C T G G T A C
p-value:1e-5
log p-value:-1.210e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif62.50%
Number of Background Sequences with motif4179.2
Percentage of Background Sequences with motif4.06%
Average Position of motif in Targets133.2 +/- 45.8bp
Average Position of motif in Background100.1 +/- 87.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GCTGTGAC
GCTGTG--
A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGAC-
NNTCCTGCTGTGNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

MGA/MA0801.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGAC
AGGTGTGA-
A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGAC
AGGTGTGA-
A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGAC----
AGGACGCTGTAAAGGGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGAC
AGGTGTGA-
A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C
C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

Zic2/MA1629.1/Jaspar

Match Rank:7
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGAC
CCCCCTGCTGTGNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGAC----
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGAC----
AAGACGCTGTAAAGCGA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GCTGTGAC-
TNTCCTGCTGTGNNG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A C G T A C T G C G T A A G T C A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G