Information for 4-TMGCTAAGAG (Motif 19)

A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G
Reverse Opposite:
G T A C C A G T G T A C A C G T C A G T C T G A A C T G A G T C A C G T G T C A
p-value:1e-3
log p-value:-8.534e+00
Information Content per bp:1.709
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif3968.0
Percentage of Background Sequences with motif5.07%
Average Position of motif in Targets88.8 +/- 52.0bp
Average Position of motif in Background101.8 +/- 76.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TMGCTAAGAG-
---CTAATKGV
A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G A C G T
A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

GATA6/MA1104.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TMGCTAAGAG--
NNAGATAAGATAN
A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G A C G T A C G T
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

PB0021.1_Gata3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TMGCTAAGAG------
TTTTTAGAGATAAGAAATAAAG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0023.1_Gata6_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TMGCTAAGAG---
TATAGAGATAAGAATTG
A C G T A C G T A C G T A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G A C G T A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

HMBOX1/MA0895.1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TMGCTAAGAG
GTTAACTAGN--
A C G T A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TMGCTAAGAG
NNAGATTAGAN
A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

BATF3/MA0835.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TMGCTAAGAG
TATGACTCATA-
A C G T A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G
C G A T G T C A G C A T C A T G G C T A A T G C C G A T G T A C C G T A C G A T G C T A A C G T

GATA2/MA0036.3/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TMGCTAAGAG
NNAGATAAGNN
A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A

BATF::JUN/MA0462.2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TMGCTAAGAG
TATGACTCATA-
A C G T A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G
C G A T T G C A G C A T C A T G C T G A A T G C C G A T G T A C C G T A C A G T G C T A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TMGCTAAGAG-
NCCGTTGCTANGNGN
A C G T A C G T A C G T A C G T A C G T T G C A C T A G G T A C A G C T G T C A C G T A A C T G G T C A A C T G A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G