Information for 12-TGATCTGTGGAG (Motif 24)

A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C G T A G T C C G T A
p-value:1e-3
log p-value:-8.307e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets142.0 +/- 0.0bp
Average Position of motif in Background132.8 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TGATCTGTGGAG
------GTGGAT
A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATCTGTGGAG--
NTGACCTTTGGACCC
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G C A T A G C T C T A G C T A G G T C A G T A C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGATCTGTGGAG
CTGACCTTTG---
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGATCTGTGGAG
NNNNNATTGATGNGTGN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGATCTGTGGAG--
--NNHTGTGGTTWN
A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGATCTGTGGAG
TTGAMCTTTG---
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G A C G T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGATCTGTGGAG
NNTGATTTATGNN-
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TGATCTGTGGAG--
NNNNTTTCTGGAGNN
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G A C G T A C G T
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGATCTGTGGAG
---GCTGTG---
A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGATCTGTGGAG
NNNGTGACCTTTGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C T G A C T G C G T A A C T G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A