Information for 20-CAGTTGGCAT (Motif 31)

A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C A G T C C G T A C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.046e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets80.2 +/- 54.5bp
Average Position of motif in Background74.9 +/- 46.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CAGTTGGCAT
-GGTTGGCAT
A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CAGTTGGCAT-
-NNTTGGCANN
A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CAGTTGGCAT---
NGTAGGTTGGCATNNN
A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MYB/MA0100.3/Jaspar

Match Rank:4
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTGGCAT
NNCAGTTGNN--
A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CAGTTGGCAT-
--NTTGGCANN
A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CAGTTGGCAT
CACGGCAGTTGGTNN
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CAGTTGGCAT
-NGTGGGCAT
A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CAGTTGGCAT
-VGCTGGCA-
A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAGTTGGCAT
TGGCAGTTGG---
A C G T A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CAGTTGGCAT
AACAGATGGC--
A C G T A C G T A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T