Information for 15-CCAATAACAC (Motif 27)

A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.538e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets184.0 +/- 0.0bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13/MA0909.2/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CCAATAACAC
CCCAATAAAAC
A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

HOXA13/MA0650.2/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-CCAATAACAC
CCCAATAAAAC
A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

HOXB13/MA0901.2/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCAATAACAC--
AACCAATAAAATTT
A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCAATAACAC---
CTACCAATAAAATTCT
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CCAATAACAC---
AACCCAATAAAATTCG
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCAATAACAC--
CAAACAACAACACCT
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

NFYC/MA1644.1/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCAATAACAC
AGCCAATCAGA-
A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:8
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCAATAACAC
CCYMATAAAA-
A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCAATAACAC----
AAAAATAACAAACGG
A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCAATAACAC
AACCAATCAGA-
A C G T A C G T A G T C A G T C C G T A C G T A A C G T C G T A C G T A A G T C C G T A A G T C
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T