Information for 20-CATAACACTC (Motif 31)

A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C G T A C T G
p-value:1e-3
log p-value:-6.977e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background98.7 +/- 72.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CATAACACTC--
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CATAACACTC-
ATGTCACAACAACAC
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CATAACACTC
CAAACAACAACACCT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CATAACACTC--
--MRSCACTYAA
A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATAACACTC
--NAACAAT-
A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CATAACACTC----
---ACCACTCAAAA
A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

ZNF410/MA0752.1/Jaspar

Match Rank:7
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CATAACACTC
TCCATCCCATAATACTC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

CDX1/MA0878.2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATAACACTC
GGCCATAAAAC--
A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATAACACTC---
---RSCACTYRAG
A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CATAACACTC-
AGAGCCATAAAATTCG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A A G T C C G T A A G T C A C G T A G T C A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G