Information for 4-WAKCAGATTAAT (Motif 4)

C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
Reverse Opposite:
C G T A A C G T G A C T C G T A C G T A C A G T A G T C C G A T C T A G G T C A A C G T C G T A
p-value:1e-4
log p-value:-1.021e+01
Information Content per bp:1.700
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif80.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets127.0 +/- 65.0bp
Average Position of motif in Background91.6 +/- 82.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-WAKCAGATTAAT
TAATCHGATTAC-
A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T

PHOX2B/MA0681.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---WAKCAGATTAAT-
TTTAATCAAATTATAT
A C G T A C G T A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T A C G T
C G A T G C A T G C A T C G T A C G T A G C A T G A T C G C T A G C T A C G T A C G A T G C A T C G T A C G A T G C T A G C A T

PB0105.1_Arid3a_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----WAKCAGATTAAT
ACCCGTATCAAATTT--
A C G T A C G T A C G T A C G T A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-WAKCAGATTAAT
TAATYNRATTAR-
A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------WAKCAGATTAAT
NTNTTCTTATCAGTNTN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A A C G T A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---WAKCAGATTAAT
TAACAGCAGACT---
A C G T A C G T A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:WAKCAGATTAAT--
----TGATTGATGA
C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PH0126.1_Obox6/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--WAKCAGATTAAT-
AAAAACGGATTATTG
A C G T A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--WAKCAGATTAAT
NTAATBNAATTA--
A C G T A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--WAKCAGATTAAT
CCAATCAA------
A C G T A C G T C G A T C G T A A C G T A G T C C G T A C T A G G T C A G A C T C G A T C T G A G T C A C G A T
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T