Information for 15-CAACAATAATTC (Motif 32)

A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.496e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets182.0 +/- 0.0bp
Average Position of motif in Background154.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:CAACAATAATTC
----AATAATT-
A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CAACAATAATTC
TTAAGAACAATAAATT
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0074.1_Sox8_1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CAACAATAATTC-
TNNAGAACAATANATNN
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAATAATTC
NTTNAGAACAATTA---
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAACAATAATTC
NAACAAT-----
A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CAACAATAATTC
-AACAAT-----
A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CAACAATAATTC
NNTNANAACAATTNNA-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CAACAATAATTC
TTTAGAACAATAAAAT
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0172.1_Sox1_2/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CAACAATAATTC
NNNTAACAATTATAN
A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0073.1_Sox7_1/Jaspar

Match Rank:10
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------CAACAATAATTC----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A