Information for 9-TAGGATTCGT (Motif 16)

A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A C G T A A C G T A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-8.529e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background95.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TAGGATTCGT--
CTACTAGGATGTNNTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

OTX2/MA0712.2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGGATTCGT-
AAGGGATTAGAA
A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PITX1/MA0682.2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAGGATTCGT
-NGGATTAN-
A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T
A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAGGATTCGT---
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAGGATTCGT---
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGGATTCGT
-RGGATTAR-
A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T
A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TAGGATTCGT
--GGATTAGC
A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGGATTCGT-----
TNAGTTTCGATTTTN
A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PH0138.1_Pitx2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAGGATTCGT----
TGAAGGGATTAATCATC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGGATTCGT
-GGGATTANN
A C G T C G T A A C T G A C T G C G T A A C G T A C G T A G T C A C T G A C G T
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G