Information for 12-AGCGTCTACCAA (Motif 15)

C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A
Reverse Opposite:
G C A T C G A T C A T G A C T G G C A T C G T A C A T G C G T A G A T C C A T G A G T C G C A T
p-value:1e-14
log p-value:-3.442e+01
Information Content per bp:1.509
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.6 +/- 51.3bp
Average Position of motif in Background106.0 +/- 83.6bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGCGTCTACCAA--
----GGTGCCAAGT
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGCGTCTACCAA----
ACATGCTACCTAATAC
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGCGTCTACCAA---
----NNTGCCAAGNN
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGCGTCTACCAA--
--TGTCTGDCACCT
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGCGTCTACCAA----
ACTTGCTACCTACACC
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AGCGTCTACCAA
TGGAATGTACCA-
A C G T C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCGTCTACCAA--
--CGTCTACACGGG
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T
A C G T A C G T A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCGTCTACCAA-
-----TTGCCAAG
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

PB0096.1_Zfp187_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCGTCTACCAA---
-TTATGTACTAATAA
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T A C G T
A C G T A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

DMRTC2/MA1479.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGCGTCTACCAA--
--AATGTATCAATT
C G T A C T A G G T A C C T A G G C A T G T A C G C A T C G T A G T A C G T A C G C T A C G T A A C G T A C G T
A C G T A C G T G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T