Information for 3-TGCATTCAGAGT (Motif 3)

A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A T G C A C G T A T C G C G T A C G T A A C G T A C T G A G T C C G T A
p-value:1e-16
log p-value:-3.770e+01
Information Content per bp:1.962
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.9 +/- 14.9bp
Average Position of motif in Background75.7 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTCAGAGT
NNCATTCATTCATNNN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGCATTCAGAGT-
CAATGCATTGTGGGTA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTCAGAGT
NNNNTGAATTCANNNC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCATTCAGAGT---
-ACATTCATGACACG
A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGCATTCAGAGT--
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGCATTCAGAGT
ATTTGCATACAATGG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

POU5F1/MA1115.1/Jaspar

Match Rank:7
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGCATTCAGAGT
NATTTGCATNN-----
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T A C G T A C G T A C G T A C G T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGCATTCAGAGT
CYRCATTCCA---
A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCATTCAGAGT
-CCAATCAA---
A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TGCATTCAGAGT
TGTGGATTNNN---
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T