Information for 19-GTCTGATGGAGG (Motif 37)

A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G T C G T C A A C G T A G T C C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.463e+00
Information Content per bp:1.970
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.3 +/- 49.4bp
Average Position of motif in Background90.4 +/- 42.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GTCTGATGGAGG----
SMCAGTCWGAKGGAGGAGGC
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GTCTGATGGAGG-
---TGATKGATGR
A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

Wt1/MA1627.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTCTGATGGAGG--
GNGTGGGGGAGGNG
A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T
T C A G A C G T T A C G G A C T T A C G C A T G T C A G T C A G T A C G G T C A A T C G C A T G T C A G C T A G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTCTGATGGAGG--
--ATGATKGATGRC
A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

YY2/MA0748.2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GTCTGATGGAGG--
---AGATGGCGGCG
A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCTGATGGAGG
TWGTCTGV------
A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCTGATGGAGG
CTGTCTGG------
A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Znf281/MA1630.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCTGATGGAGG
-GGTGGGGGAGG
A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G
A C G T C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GTCTGATGGAGG
VBSYGTCTGG------
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTCTGATGGAGG
VTGYGKGGGAGK
A C T G A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G C G T A A C T G A C T G
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G