Information for 2-CCGCTTGC (Motif 25)

G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C T G A G T C A C T G C A T G
p-value:1e-5
log p-value:-1.188e+01
Information Content per bp:1.933
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.34%
Number of Background Sequences with motif126.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets70.9 +/- 44.6bp
Average Position of motif in Background101.4 +/- 49.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCGCTTGC---
GCGCCTGCGCA
G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T A C G T A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCGCTTGC---
NNACTTGCCTT
G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T A C G T A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGCTTGC
-NGCTN--
G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

MYC/MA0147.3/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCGCTTGC--
GGCCACGTGCCC
A C G T A C G T G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T A C G T
T A C G T A C G T A G C T G A C C T G A A G T C T C A G A G C T A T C G A T G C A G T C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCGCTTGC
-TGCGTG-
G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGCTTGC--
CGCACCTGCCG
A C G T G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGCTTGC----
GCGCATGCGCAG
G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T A C G T A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGCTTGC-
ACCACTTGAA
A C G T G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

TCF3/MA0522.3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGCTTGC--
CGCACCTGCCC
A C G T G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGCTTGC--
GTGCGCATGCGC
A C G T A C G T G T A C A G T C A C T G A G T C A C G T C G A T A C T G A G T C A C G T A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C