Information for 18-GCTAATCTAC (Motif 33)

A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G C G T A A C G T A C G T C G T A A C T G A G T C
p-value:1e-2
log p-value:-6.885e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background118.1 +/- 70.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GCTAATCTAC
TTCTAATCTAT
A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
C G A T G C A T G T A C C G A T C G T A G C T A G C A T G T A C G C A T C G T A G C A T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCTAATCTAC
GCTAATCC--
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T

DPRX/MA1480.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCTAATCTAC
AGATAATCCC-
A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GCTAATCTAC--
-CTAATCCTCTT
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCTAATCTAC
GCTAATCCCC
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GCTAATCTAC
-YTAATCCY-
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCTAATCTAC----
AGGCTAATCCCCAANG
A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GCTAATCTAC--
GNNAGCTAATCCCCCN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTAATCTAC
CCTAATCCGC
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTAATCTAC
NYTAATCCYB
A C T G A G T C A C G T C G T A C G T A A C G T A G T C A C G T C G T A A G T C
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T