Information for 6-AGGACASTTKAT (Motif 7)

C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
Reverse Opposite:
G T C A A G C T G T C A C G T A C G T A A T G C A C G T A T C G A C G T A G T C A G T C A G C T
p-value:1e-4
log p-value:-1.030e+01
Information Content per bp:1.709
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif41.67%
Number of Background Sequences with motif2679.5
Percentage of Background Sequences with motif3.50%
Average Position of motif in Targets85.7 +/- 55.5bp
Average Position of motif in Background101.9 +/- 69.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGGACASTTKAT
TRAGGTCA------
A C G T A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGACASTTKAT
AAGGTCAC-----
A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGGACASTTKAT
AGGTCA------
C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AGGACASTTKAT
NBYCAAGGTCAC-----
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGACASTTKAT--
VAGRACAKWCTGTYC
A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGACASTTKAT
CCAGGAACAG-----
A C G T A C G T A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGGACASTTKAT
CAAGGHCANV----
A C G T A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGACASTTKAT
CAAAGGTCAG-----
A C G T A C G T A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGACASTTKAT---
NAGNACANNNTGTNCT
A C G T C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T A C G T A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGGACASTTKAT--
--GWAAYHTGAKMC
C T G A C T A G A C T G G T C A A T G C C G T A A T C G G C A T G C A T A C G T C T G A A C G T A C G T A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C