Information for 6-CCGAGGTGCT (Motif 13)

A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C T G A C T G
p-value:1e-3
log p-value:-7.998e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGAGGTGCT--
--DAGGTGTBAA
A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.64
Offset:-8
Orientation:reverse strand
Alignment:--------CCGAGGTGCT---
GGCGCTGTCCATGGTGCTGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCGAGGTGCT-
---AGGTGTCA
A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:4
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------CCGAGGTGCT--
GGAGCTGTCCATGGTGCTGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGAGGTGCT----
ATCCACAGGTGCGAAAA
A C G T A C G T A C G T A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCGAGGTGCT-----
GCGGAGGTGTCGCCTC
A C G T A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

TBX6/MA1567.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCGAGGTGCT--
--GAGGTGTGAA
A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A

TCF4/MA0830.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCGAGGTGCT-
NNGGCAGGTGCNN
A C G T A C G T A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCGAGGTGCT
NNGCAGGTGNN
A C G T A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCGAGGTGCT
NNCAGGTGNN
A G T C A G T C A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G