Information for 9-ATATACGTGC (Motif 23)

C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G A C G T C G T A A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.768e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.0 +/- 0.0bp
Average Position of motif in Background127.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.81
Offset:2
Orientation:forward strand
Alignment:ATATACGTGC
--RTACGTGC
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.79
Offset:3
Orientation:forward strand
Alignment:ATATACGTGC-
---TACGTGCV
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF1A/MA1106.1/Jaspar

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:ATATACGTGC--
--GTACGTGCCC
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:ATATACGTGC
GGGTACGTGC
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.73
Offset:2
Orientation:forward strand
Alignment:ATATACGTGC
--GGACGTGC
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C
A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

Npas2/MA0626.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:ATATACGTGC-
-NACACGTGCN
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

HES6/MA1493.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATATACGTGC-
-AACACGTGCC
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C

Mlxip/MA0622.1/Jaspar

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATATACGTGC
--ACACGTGC
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATATACGTGC
-NVCACGTG-
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T

SOHLH2/MA1560.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATATACGTGC-
-CGCACGTGCA
C G T A A C G T C G T A A C G T C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T G A T C A C T G G A T C C T G A A T G C C A T G G A C T C T A G T G A C T C G A