Information for 2-CGCTTTCG (Motif 38)

A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A C G T A A C T G A G T C A C T G
p-value:1e-2
log p-value:-5.811e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background76.0 +/- 73.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF7/MA0772.1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTTTCG-
ANTTTCGCTTTCGN
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGCTTTCG--
TGGTTTCAGT
A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CGCTTTCG-----
TNTGGTTTCGATACN
A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

IRF8/MA0652.1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTTTCG-
AGTTTCGGTTTCGN
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.66
Offset:-10
Orientation:reverse strand
Alignment:----------CGCTTTCG
GTTTTGCTTTCACTTTCC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

IRF4/MA1419.1/Jaspar

Match Rank:6
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------CGCTTTCG-
TAGTTTCGGTTTCGG
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T
G C A T C T G A A T C G C A G T G C A T A C G T A G T C C T A G T A C G C G A T G C A T C A G T A G T C C T A G C T A G

IRF5/MA1420.1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CGCTTTCG-
AGTTTCGGTTTCGG
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T
T C G A A C T G C A G T G C A T A C G T A G T C C T A G C T A G G A C T C G A T G C A T G T A C T C A G C T A G

BCL6/MA0463.2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGCTTTCG-------
ATGCTTTCGAGGAATT
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C T A G G T A C G C A T A C G T G C A T A G T C A C T G G C T A C T A G A C T G C T G A C G T A G A C T C A G T

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGCTTTCG-----
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

ELK4/MA0076.2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGCTTTCG--
CCACTTCCGGC
A C G T A G T C A C T G A G T C A C G T A C G T A C G T A G T C A C T G A C G T A C G T
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C