Information for 25-AGTTCTCACC (Motif 35)

C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G C G T A A C T G C G T A C G T A A G T C A C G T
p-value:1e0
log p-value:-1.796e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets92.9 +/- 57.0bp
Average Position of motif in Background134.3 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)7.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX18/MA1565.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGTTCTCACC---
-NTTCACACCTCC
C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGTTCTCACC-
-ATTAACACCT
C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGTTCTCACC--
--TTCACACCTT
C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGTTCTCACC-----
NNTTTTCACACCTTNNN
A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTTCTCACC-
-TTTCACACCT
C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGTTCTCACC--
NTTTTCACACCTT
A C G T C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

ZNF274/MA1592.1/Jaspar

Match Rank:7
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------AGTTCTCACC
GGTATGAGTTCTCGCT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C
C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----AGTTCTCACC--
CGAACAGTGCTCACTAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

TBR1/MA0802.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AGTTCTCACC-
-TTTCACACCT
C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AGTTCTCACC--
--TTVACACCTH
C G T A A C T G A C G T A C G T A G T C A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C