Information for 18-GAGCACCTGAGA (Motif 22)

A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.359e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets59.0 +/- 0.0bp
Average Position of motif in Background107.9 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGCACCTGAGA
-NNCACCTGNN-
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

TCF4/MA0830.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAGCACCTGAGA-
CGGCACCTGCCCC
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

SNAI1/MA1558.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAGCACCTGAGA
-NGCACCTGCN-
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A
A C G T G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GAGCACCTGAGA--
NNTNCGCACCTGTNGAN
A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C G T A C G T
G C A T C A G T G C A T A G C T G A T C T C A G G T A C C T G A A T G C T A G C A C G T A C T G A C G T C A T G C A T G G T C A A G C T

ZEB1/MA0103.3/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GAGCACCTGAGA
-CCCACCTGCGC
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A
A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGCACCTGAGA
-ACCACGTG---
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGCACCTGAGA-
ATGCACCTGTCAT
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C G T
T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

Rbpjl/MA1621.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGCACCTGAGA-
CGAACACCTGTCCC
A C G T A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C G T
A T G C T C A G T G C A T C G A G T A C C T G A A T G C T A G C A G C T A T C G A G C T A T G C G A T C A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGCACCTGAGA
SNGCACCTGCHS
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GAGCACCTGAGA
-ACCACCTGTT-
A C T G C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G C G T A
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T