Information for 18-AGTCATCTACCA (Motif 18)

C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T C G T A A C T G C G T A A C G T A C T G C G T A A G T C A C G T
p-value:1e-4
log p-value:-9.617e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGTCATCTACCA-
-GYCATCMATCAT
C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A A C G T
A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGTCATCTACCA
RGCCATYAATCA
C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
C T A G T A C G G A T C T G A C T C G A A C G T G A C T G C T A T C G A A G C T G A T C G C T A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGTCATCTACCA
--YCATCMATCA
C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
A C G T A C G T G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A

JUN::JUNB/MA1132.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATCTACCA
ATGAGTCATC-----
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
C T G A C G A T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G T A C A C G T A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGTCATCTACCA
--TCATCAATCA
C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGTCATCTACCA
GARTGGTCATCGCCC-
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C A C G T

FOSL1::JUNB/MA1137.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCATCTACCA
NNATGAGTCATNN----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
C A T G A C G T T C G A G A C T C A T G G T C A T A C G G C A T G T A C C G T A A G C T G T A C C T G A A C G T A C G T A C G T A C G T

FOSL2::JUND/MA1144.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATCTACCA
ATGAGTCATC-----
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T T G A C A C G T A C G T A C G T A C G T A C G T

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCATCTACCA
NNATGAGTCATNN----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
A C T G C A T G T C G A A G C T C A T G G T C A T C A G C G A T G T A C C T G A A G C T G T A C T G C A A C G T A C G T A C G T A C G T

FOSB::JUNB/MA1135.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTCATCTACCA
ATGAGTCATC-----
A C G T A C G T A C G T C G T A A C T G A C G T A G T C C G T A A C G T A G T C A C G T C G T A A G T C A G T C C G T A
T C G A G A C T A C T G G T C A T A C G A C G T G T A C G C T A A G C T T G A C A C G T A C G T A C G T A C G T A C G T