Information for 8-TTTAAAGGCCTA (Motif 10)

A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:TTTAAAGGCCTA-
-----AGGCCTNG
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.70
Offset:5
Orientation:forward strand
Alignment:TTTAAAGGCCTA-
-----AGGCCTAG
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTAAAGGCCTA
TTTAATTGCN--
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTTAAAGGCCTA
CCTTTTATAGNC---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTAAAGGCCTA
GGTTAGAGACCT-
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTAAAGGCCTA
TTTTATGGCB--
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTAAAGGCCTA-
NNAATTAATGACCNNN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTAAAGGCCTA
TTTTATGGCM--
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTTAAAGGCCTA
ANTAATTTTATGGCCGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTAAAGGCCTA
NATTCAAAT-----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C A C G T C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T