Information for 10-CCAACCTTTCTC (Motif 12)

A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets148.2 +/- 28.9bp
Average Position of motif in Background82.2 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CCAACCTTTCTC--
---TTCTTTCTCTT
A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCAACCTTTCTC-
NNGCACCTTTCTCC
A C G T A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Nr2e3/MA0164.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCAACCTTTCTC
-CAAGCTT----
A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCAACCTTTCTC----
----ACTTTCACTTTC
A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCAACCTTTCTC--
----CCTTTGTTTT
A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CCAACCTTTCTC
ACTATGCCAACCTACC--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCAACCTTTCTC
----CCWTTGTY
A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCAACCTTTCTC-
-TGACCTTTNCNT
A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCAACCTTTCTC------
NTGACCTTTGACCTANAT
A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G A C T T C A G T G C A G T A C A G T C A G C T G A C T G A C T T C A G T G C A G A T C G T A C A G C T T G C A A G T C C G T A C G A T

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCAACCTTTCTC-
NNNNCAACCTTCGNGA
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A G T C A C G T A G T C A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A