| p-value: | 1e-4 |
| log p-value: | -1.082e+01 |
| Information Content per bp: | 1.629 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 40.00% |
| Number of Background Sequences with motif | 1365.2 |
| Percentage of Background Sequences with motif | 1.80% |
| Average Position of motif in Targets | 138.5 +/- 28.2bp |
| Average Position of motif in Background | 100.7 +/- 66.7bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CATGGATRGCTA- GTCATGCHTGRCTGS |
|
|
|
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 2 |
| Score: | 0.54 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CATGGATRGCTA- NGTCACGCTTGGCTGC |
|
|
|
HMBOX1/MA0895.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.53 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | CATGGATRGCTA-- ----GTTAACTAGN |
|
|
|
PH0170.1_Tgif2/Jaspar
| Match Rank: | 4 |
| Score: | 0.52 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CATGGATRGCTA--- GTATTGACAGCTNNTT |
|
|
|
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 5 |
| Score: | 0.51 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----CATGGATRGCTA TNNATTATGCATANNTT |
|
|
|
PH0168.1_Hnf1b/Jaspar
| Match Rank: | 6 |
| Score: | 0.51 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CATGGATRGCTA----- AGCTGTTAACTAGCCGT |
|
|
|
POU4F2/MA0683.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.51 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CATGGATRGCTA----- -ATGCATAATTAATGAG |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 8 |
| Score: | 0.49 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CATGGATRGCTA ATGATKGATGRC-- |
|
|
|
POL010.1_DCE_S_III/Jaspar
| Match Rank: | 9 |
| Score: | 0.49 |
| Offset: | 7 |
| Orientation: | reverse strand |
| Alignment: | CATGGATRGCTA -------NGCTN |
|
|
|
EVX2/MA0888.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.49 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CATGGATRGCTA-- ----GGTAATTAGC |
|
|
|