Information for 3-ACAGGGTGCG (Motif 6)

C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T
p-value:1e-4
log p-value:-9.590e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-ACAGGGTGCG-
AGCAGGGGGCGC
A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ACAGGGTGCG---
-NTGGGTGTGGCC
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ACAGGGTGCG---
--TGGGTGTGGCN
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGGTGCG-----
NNNAAGGGGGCGGGNNN
A C G T A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

KLF4/MA0039.4/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACAGGGTGCG---
-NNGGGTGGGGNN
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C G T T A C G C A T G C T A G A T C G T A C G G A C T C A T G C A T G C T A G C T A G T A G C A T C G

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACAGGGTGCG--
--DGGGYGKGGC
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T A C G T
A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

KLF2/MA1515.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACAGGGTGCG---
--NGGGCGTGGTN
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T T C A G A T C G T A C G A G T C C T A G A C G T C A T G A C T G A G C T A T C G

ZSCAN4/MA1155.1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAGGGTGCG--
TTTTCAGTGTGTGCA
A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G A C G T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGGTGCG
CACAGN-----
A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ACAGGGTGCG
AAAACAGGTTTT-
A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C T G A G T C A C T G
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T A C G T