Information for 2-CGTTGGTTCA (Motif 9)

A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A C G T A A T G C A T G C C G T A C G T A A G T C A C T G
p-value:1e-10
log p-value:-2.383e+01
Information Content per bp:1.930
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif8.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets102.3 +/- 57.6bp
Average Position of motif in Background97.5 +/- 50.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGTTGGTTCA
-GTTTGTT--
A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A
A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CGTTGGTTCA
--TGAGTTCA
A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A
A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A

RFX7/MA1554.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGTTGGTTCA
CGTTGCTAT-
A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A
A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGTTGGTTCA----
AGAGCGGGGTCAAGTA
A C G T A C G T A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGGTTCA----
NNCATTCATTCATNNN
A C G T A C G T A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CGTTGGTTCA---
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGTTGGTTCA-
-ATTGCATCAK
A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T

ZNF24/MA1124.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGTTGGTTCA---
CATTCATTCATTC
A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A A C G T A C G T A C G T
G A T C T C G A G A C T A G C T G A T C T C G A A G C T A G C T G A T C T C G A G A C T A G C T G A T C

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CGTTGGTTCA---
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CGTTGGTTCA----
NNNNTTTGTTTACNNT
A C G T A C G T A G T C A C T G A C G T A C G T A T C G A T C G A C G T A C G T A T G C C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T