Information for 10-CATGTACCCTCA (Motif 6)

A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G C G T A C T A G C T A G A C T G C G A T T C G A A G T C G C T A C A G T C T A G
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.759
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif122.1
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets98.9 +/- 64.8bp
Average Position of motif in Background103.5 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CATGTACCCTCA--
---GTACCCGCATN
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CATGTACCCTCA--
----TACCCGCATN
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATGTACCCTCA---
---AAAACCTCAAAT
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

MSANTD3/MA1523.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CATGTACCCTCA-
---GTACACTCAC
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T
A C G T A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

PB0024.1_Gcm1_1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATGTACCCTCA-----
-TCGTACCCGCATCATT
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATGTACCCTCA-------
GCCTCCTCCMTCWGACTGKS
A C G T A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

TFAP2A/MA0003.4/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CATGTACCCTCA-----
---ATTGCCTCAGGCCA
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CATGTACCCTCA--
---AGCCACTCAAG
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

NKX2-5/MA0063.2/Jaspar

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CATGTACCCTCA---
----ACCACTCAAAA
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CATGTACCCTCA
---CTGCCCGCA
A G T C G C T A C A G T T C A G A G C T G C T A G T A C A G T C G A T C A C G T G T A C C G T A
A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A