Information for 3-BTHGACAGCCAC (Motif 3)

A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G C G A T C T A G A C T G A T G C A C G T A C T G C G A T G T A C C A T G G T C A T A C G
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.717
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif718.0
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets60.2 +/- 35.4bp
Average Position of motif in Background101.8 +/- 67.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:BTHGACAGCCAC
-----CAGCC--
A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:BTHGACAGCCAC
-TTGACAGC---
A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--BTHGACAGCCAC--
GTATTGACAGCTNNTT
A C G T A C G T A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:forward strand
Alignment:BTHGACAGCCAC---
-----AAACCACANN
A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---BTHGACAGCCAC--
GATATTGACAGCTGCGT
A C G T A C G T A C G T A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

KLF9/MA1107.2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-BTHGACAGCCAC---
CAGCCACACCCACCCC
A C G T A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C A C G T A C G T A C G T
T G A C T C G A T A C G T G A C A G T C T G C A T A G C T C G A A T G C T G A C A G T C G T C A A G T C G T A C A G T C T G A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---BTHGACAGCCAC--
TCNCTTTACAGCGNNNT
A C G T A C G T A C G T A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:BTHGACAGCCAC
VBTGWCAGCB--
A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:BTHGACAGCCAC
------ATCCAC
A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:BTHGACAGCCAC
-TTGACAGG---
A G T C A C G T G A T C A C T G C G T A G T A C C G T A A T C G A G T C A G T C C G T A A G T C
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T