| p-value: | 1e-6 |
| log p-value: | -1.529e+01 |
| Information Content per bp: | 1.691 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 37.50% |
| Number of Background Sequences with motif | 189.6 |
| Percentage of Background Sequences with motif | 0.16% |
| Average Position of motif in Targets | 122.0 +/- 34.8bp |
| Average Position of motif in Background | 94.2 +/- 109.7bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0093.1_Lhx3/Jaspar
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TNAAGTWAGTAM- GAAATTAATTAAATAAT |
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PH0149.1_Pou3f4/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TNAAGTWAGTAM--- AATTAATTAATTAATTC |
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PH0095.1_Lhx5/Jaspar
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TNAAGTWAGTAM- CGAATTAATTAAATACT |
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PH0146.1_Pou3f1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TNAAGTWAGTAM-- NANTTAATTAATTANNN |
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PH0142.1_Pou1f1/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TNAAGTWAGTAM--- GATTAATTAATTAAGTC |
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|
|
PH0045.1_Hoxa1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TNAAGTWAGTAM--- CTGAGCTAATTACCGT |
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PH0136.1_Phox2b/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TNAAGTWAGTAM- CNNNTTAATTAATTNNN |
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|
PH0173.1_Uncx/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TNAAGTWAGTAM- CNCNTTAATTAATTANN |
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|
PH0101.1_Lmx1b/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TNAAGTWAGTAM- NNAATTAATTAAAAANN |
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Lhx3/MA0135.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TNAAGTWAGTAM-- -AAATTAATTAATC |
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