Information for 5-CGGGGGSTCC (Motif 10)

A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A A T G C A G T C A T G C A G T C A G T C G T A C C T A G
p-value:1e-9
log p-value:-2.201e+01
Information Content per bp:1.839
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets103.8 +/- 51.0bp
Average Position of motif in Background114.4 +/- 63.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0025.1_Glis2_1/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CGGGGGSTCC---
NTNTGGGGGGTCNNNA
A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

GLIS2/MA0736.1/Jaspar

Match Rank:2
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGSTCC
CTTCGCGGGGGGTC-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T

ZIC5/MA1584.1/Jaspar

Match Rank:3
Score:0.76
Offset:-6
Orientation:reverse strand
Alignment:------CGGGGGSTCC
GCNCAGCGGGGGGTCN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
C A T G T G A C C T G A A G T C T C G A T C A G G A T C C T A G A C T G C A T G A C T G A C T G C A T G A G C T T G A C A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.73
Offset:-6
Orientation:reverse strand
Alignment:------CGGGGGSTCC
NCNCAGCGGGGGGTC-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CGGGGGSTCC
CGTGGGTGGTCC
A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:6
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CGGGGGSTCC-----
GCTGGGGGGTACCCCTT
A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGSTCC
CACAGCGGGGGGTC-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------CGGGGGSTCC
NCGCAGCGGGGGGTC-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T

PLAGL2/MA1548.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGGGGGSTCC-
-NGGGGGCCCN
A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C A C G T
A C G T C G T A C T A G C T A G A C T G A C T G A T C G A T G C A G T C G T A C C G T A

GLIS3/MA0737.1/Jaspar

Match Rank:10
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGGGSTCC
CTTCGTGGGGGGTC-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G A T C G A C T G A T C G C G A T A G T C A G T C
T A G C C A G T G C A T G A T C T C A G G A C T C T A G A C T G C T A G C T A G A C T G T A C G A G C T T G A C A C G T