Information for 10-AWAGACAC (Motif 38)

C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G A T A G T C A G C T C G A T A C G T
p-value:1e-4
log p-value:-1.068e+01
Information Content per bp:1.894
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif7.70%
Number of Background Sequences with motif2200.4
Percentage of Background Sequences with motif4.54%
Average Position of motif in Targets103.8 +/- 55.9bp
Average Position of motif in Background100.1 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AWAGACAC------
ATAAATGACACCTATCA
A C G T A C G T A C G T C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AWAGACAC
AAGGTCAC
C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AWAGACAC
-TTGACAG
C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AWAGACAC-
CAAGGHCANV
A C G T C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AWAGACAC
NBYCAAGGTCAC
A C G T A C G T A C G T A C G T C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AWAGACAC---
-NTCACACCTN
C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AWAGACAC-
-TTGACAGG
C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C A C G T
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AWAGACAC
TCAAGGTCAN
A C G T A C G T C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0033.1_Irf3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AWAGACAC--
GAGAACCGAAACTG
A C G T A C G T A C G T A C G T C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

NR5A1/MA1540.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AWAGACAC
GTCAAGGTCAC
A C G T A C G T A C G T C G T A C G T A C T G A A C T G C G T A A G T C C G T A A G T C
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C