Information for 14-GCCTGAACTA (Motif 34)

A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C G T A C G T A G T C C G T A A C T G A C T G A G T C
p-value:1e-2
log p-value:-6.846e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background110.3 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GCCTGAACTA-
--ATGAACTTT
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C G T
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GCCTGAACTA-
---TGAACTCA
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCTGAACTA--
--TTGAMCTTTG
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCCTGAACTA--
--GTTAACTAGN
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCTGAACTA------
--TTGACCTANTTATN
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

ELK3/MA0759.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCTGAACTA
ACCGGAAGTA
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A
C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T C T G A

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCTGAACTA
RCCGGAAGTD
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

ELK1/MA0028.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCTGAACTA
ACCGGAAGTG
A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A
C T G A T A G C T G A C A C T G A C T G T G C A G C T A T C A G A G C T C T A G

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGAACTA----
NNHYTGACCTAGWTT
A C G T A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGAACTA
TGACCTTGACCT-
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C G T C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T