Information for 10-GAAATACATAAT (Motif 16)

A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C G T A C T G A C G T C G T A A C G T A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background171.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAAATACATAAT-
NNATTGCATAANN
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GAAATACATAAT---
---ATGCATAATTCA
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

TEF/MA0843.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAAATACATAAT-
-TATTACGTAACA
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A G C T T C G A G C A T C G A T C T G A G A T C C T A G A G C T G C T A C T G A A G T C T G C A

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAAATACATAAT---
AAAATATGCATAATAAA
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAAATACATAAT
--VTTRCATAAY
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T
A C G T A C G T T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAATACATAAT
AAAAAATCGATAAT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GAAATACATAAT-
---ATGAATATTC
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

ONECUT3/MA0757.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GAAATACATAAT
AAAAAATCAATAAT
A C G T A C G T A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T
T C G A C T G A C G T A G C T A C T G A C T G A G A C T G T A C T C G A C G T A C G A T C G T A G C T A G C A T

DBP/MA0639.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GAAATACATAAT-
-TATTACGTAACA
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T T C G A G C A T A C G T C T G A A G T C T C A G A G C T T G C A C G T A A G T C T C G A

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAAATACATAAT-
-AAACAAACATTC
A C T G C G T A C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C