Information for 20-TCCTGTGAGTGT (Motif 29)

A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A G T C A C G T A G T C C G T A A G T C C G T A C T A G A C T G C G T A
p-value:1e-4
log p-value:-1.040e+01
Information Content per bp:1.949
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets105.6 +/- 40.9bp
Average Position of motif in Background70.6 +/- 43.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TCCTGTGAGTGT--
----GTGAGTGNAC
A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TCCTGTGAGTGT-
--NNTTGAGTGNN
A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGTGAGTGT
ACTTCCTGTT-----
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCTGTGAGTGT
RTCATGTGAC---
A C G T A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCTGTGAGTGT---
-NNNTTGAGTGGNNN
A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCCTGTGAGTGT--
----TTRAGTGSYK
A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TCCTGTGAGTGT--
----TTAAGTGCTT
A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCCTGTGAGTGT
ATTTCCTGTN-----
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T
C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCCTGTGAGTGT
-GCTGTG-----
A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCTGTGAGTGT----
NTTNTATGAATGTGNNC
A C G T A C G T A G T C A G T C A C G T C T A G A C G T C T A G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C