Information for 5-AAGGGCAAGGTC (Motif 8)

C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.059e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR6A1/MA1541.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---AAGGGCAAGGTC--
GTCAAGTTCAAGGTCAA
A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AAGGGCAAGGTC-
-AGGTCAAGGTCA
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AAGGGCAAGGTC-
-AGGTCAAGGTCA
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAGGGCAAGGTC---
AAGTTCAAGGTCAGC
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

NR5A1/MA1540.1/Jaspar

Match Rank:5
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AAGGGCAAGGTC--
---GTCAAGGTCAC
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

ESRRA/MA0592.3/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AAGGGCAAGGTC---
--GCTCAAGGTCACA
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.68
Offset:5
Orientation:forward strand
Alignment:AAGGGCAAGGTC---
-----CAAGGHCANV
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AAGGGCAAGGTC-
---BTCAAGGTCA
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AAGGGCAAGGTC--
----TCAAGGTCAN
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

Esrrg/MA0643.1/Jaspar

Match Rank:10
Score:0.67
Offset:4
Orientation:forward strand
Alignment:AAGGGCAAGGTC--
----TCAAGGTCAT
C G T A C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T