Information for 3-AAAGGGCTCG (Motif 10)

C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A C T G A G T C A G T C A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.720e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background195.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0009.1_E2F3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGCTCG----
ATAAGGGCGCGCGAT
A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAGGGCTCG
--AGGCCTNG
C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAAGGGCTCG----
CGAACAGTGCTCACTAT
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGCTCG----
ATAAAGGCGCGCGAT
A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAAGGGCTCG
--AGGCCTAG
C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

NR4A1/MA1112.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAAGGGCTCG
TTAAAGGTCAAA
A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGCTCG--
TCTCAAAGGTCACCTG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGCTCG--
TCTCAAAGGTCACGAG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAAGGGCTCG
----NGCTN-
C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGGCTCG
NBYCAAGGTCAC-
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C T G A G T C A C G T A G T C A C T G
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C A C G T