Information for 2-CCDVCTATAATA (Motif 2)

T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A
Reverse Opposite:
C A G T G T C A A C G T C G A T C T G A A G C T C G T A C A T G A T G C G C A T C A T G A T C G
p-value:1e-7
log p-value:-1.645e+01
Information Content per bp:1.634
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif38.46%
Number of Background Sequences with motif665.9
Percentage of Background Sequences with motif0.90%
Average Position of motif in Targets102.7 +/- 65.3bp
Average Position of motif in Background99.8 +/- 71.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCDVCTATAATA---
TATAATTATAATATTC
A C G T T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCDVCTATAATA---
NNNTTTNTAATACNG
T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCDVCTATAATA---
GCTAATTATAATTATC
A C G T T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCDVCTATAATA---
TAAGATTATAATACGG
A C G T T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

PB0069.1_Sox21_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCDVCTATAATA---
TTTAATTATAATTAAG
A C G T T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:CCDVCTATAATA
-----TTTAAT-
T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

LHX1/MA1518.1/Jaspar

Match Rank:7
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CCDVCTATAATA--
------NTAATTGN
T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G G C A T T C G A C G T A C G A T A C G T C T A G T A G C

NKX6-2/MA0675.1/Jaspar

Match Rank:8
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CCDVCTATAATA--
------TTAATTAN
T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

Dlx3/MA0880.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CCDVCTATAATA--
------NTAATTGN
T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T T C G A C G T A C A G T C A G T C T A G A T C G

GSX1/MA0892.1/Jaspar

Match Rank:10
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CCDVCTATAATA---
-----NNTAATTAGN
T A G C G A T C C G A T T A C G G A T C C G A T T C G A A G C T C G T A C G T A A C G T G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T G C A T C G T A C G T A A G C T C A G T C T G A T A C G C A T G