Information for 1-CATTGAAG (Motif 8)

A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G
Reverse Opposite:
A G T C A C G T G A C T G T A C C G T A C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.088e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3206.0
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets112.8 +/- 64.4bp
Average Position of motif in Background100.9 +/- 72.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CATTGAAG--
TAATTCAATGAAGTG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CATTGAAG
CTCATTAAA-
A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------CATTGAAG--
NNCATTCATTCATNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CATTGAAG-
CCTTTGAWGT
A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CATTGAAG-
CCTTTGATGT
A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G A C G T
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TEAD1/MA0090.3/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATTGAAG--
CCACATTCCAGGC
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G A C G T A C G T
G A T C G A T C C T G A T G A C C T G A A G C T C G A T G T A C G A T C C G T A C T A G T A C G T G A C

TCF7/MA0769.2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CATTGAAG-
TCCTTTGATGT
A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G A C G T
A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

SOX2/MA0143.4/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CATTGAAG
NNCCATTGTNN
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CATTGAAG---
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

SOX13/MA1120.1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATTGAAG
NNCCATTGTNN
A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G C T G A C G T A A C T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T