Information for 24-GTGCAGCTGC (Motif 38)

C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G T C A A G T C
p-value:1e-2
log p-value:-5.579e+00
Information Content per bp:1.899
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif177.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets102.2 +/- 48.4bp
Average Position of motif in Background96.3 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.70
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GTGCAGCTGC---
-DGCAGCTGCYSS
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

ASCL1/MA1100.2/Jaspar

Match Rank:2
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GTGCAGCTGC-
-NGCAGCTGCN
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A C G T T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GTGCAGCTGC---
CAGCACCTGCCCC
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GTGCAGCTGC-
-CGCAGCTGCG
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

TCF4/MA0830.2/Jaspar

Match Rank:5
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTGCAGCTGC---
CGGCACCTGCCCC
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.78
Offset:0
Orientation:forward strand
Alignment:GTGCAGCTGC--
SNGCACCTGCHS
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GTGCAGCTGC--
--GCAGCTGTNN
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GTGCAGCTGC----
NNNNAGCAGCTGCTGAN
A C G T A C G T A C G T C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MYOG/MA0500.2/Jaspar

Match Rank:9
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GTGCAGCTGC--
NNGCAGCTGCNN
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:10
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GTGCAGCTGC-
-TRCACCTGCY
C T A G A C G T A C T G A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T
A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T