Information for 1-GTCTCGGCCG (Motif 5)

A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A G T C A G T C A C T G C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-9.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background127.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCTCGGCCG-
ACCACTCTCGGTCAC
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0138.1_Irf4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTCTCGGCCG-
AGTATTCTCGGTTGC
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

IRF6/MA1509.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCGGCCG
AGTTTCGGT--
A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G
C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTCTCGGCCG
--CTAGGCCT
A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCTCGGCCG
CTGTCTGG----
A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCTCGGCCG
TGTCTAGA---
A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCTCGGCCG-
GGGGCCGAGGCCTG
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

POL011.1_XCPE1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCGGCCG
GGTCCCGCCC-
A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTCTCGGCCG-
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

ZSCAN29/MA1602.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCTCGGCCG-
CGTCTACACGGG
A C G T A C T G A C G T A G T C A C G T A G T C A C T G A C T G A G T C A G T C A C T G A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G