Information for 17-GCAGGGTCATTC (Motif 17)

A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.032e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GCAGGGTCATTC-
--NAGGTCATTGA
A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C A C G T
A C G T A C G T C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTCATTC-
CGCGCCGGGTCACGTA
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

NR2C1/MA1535.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCAGGGTCATTC
-CGAGGTCAC--
A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C
A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTCATTC-
AGAGCGGGGTCAAGTA
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCAGGGTCATTC
TCAAGGTCATA-
A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTCATTC--
TATTCAAGGTCATGCGA
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCAGGGTCATTC
--GAGGTCAT--
A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C
A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGGTCATTC--
TGCTGAGTCATNNTG
A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCAGGGTCATTC
---AGGTCA---
A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCAGGGTCATTC
NRBCARRGGTCA---
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T