Homer de novo Motif Results (motif_results/SRR12081044//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 894
Total background sequences = 40500
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A A C G T A T G C C G T A A G T C G T A C A G C T C G T A A G T C G T A C A C G T C G T A 1e-29-6.768e+011.34%0.00%57.0bp (0.0bp)RORA(var.2)/MA0072.1/Jaspar(0.649)
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motif file (matrix)
2 G A C T A G T C A G C T C G T A T A G C G T C A T C G A G A T C G A T C G T A C G T A C G T A C 1e-29-6.768e+011.34%0.00%49.5bp (0.0bp)GFY(?)/Promoter/Homer(0.757)
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motif file (matrix)
3 A G C T C G T A A T C G C G T A A G T C C G T A C A T G A C G T C G T A A T C G C A T G A G C T 1e-23-5.358e+012.79%0.14%50.4bp (65.4bp)ZKSCAN1/MA1585.1/Jaspar(0.734)
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motif file (matrix)
4 A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T 1e-12-2.958e+010.89%0.01%40.9bp (33.6bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.691)
More Information | Similar Motifs Found
motif file (matrix)
5 A G C T G C A T A C G T A G C T C G T A A C T G C T A G C T A G A G C T A G C T A G C T A C G T 1e-12-2.800e+012.12%0.23%48.0bp (56.1bp)PH0064.1_Hoxb9/Jaspar(0.670)
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motif file (matrix)
6 * C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G 1e-11-2.691e+016.14%2.06%54.4bp (59.6bp)POL012.1_TATA-Box/Jaspar(0.674)
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motif file (matrix)
7 * A C G T A C T G A C G T C G T A A C G T A C T G A G T C G T C A A C G T A C G T A C G T A C T G 1e-11-2.627e+010.67%0.01%37.0bp (13.2bp)Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer(0.660)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C T G 1e-10-2.465e+010.56%0.00%58.7bp (26.9bp)YY1(Zf)/Promoter/Homer(0.645)
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motif file (matrix)
9 * C G T A A G T C C G T A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A C G T C G T A 1e-10-2.465e+010.56%0.00%26.0bp (0.0bp)ZBTB32/MA1580.1/Jaspar(0.659)
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motif file (matrix)
10 * A C G T A T G C A T C G C G T A A G T C C G T A C G A T A C G T C G T A A G T C A G T C C G T A 1e-10-2.465e+010.56%0.00%54.3bp (0.0bp)PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer(0.623)
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motif file (matrix)
11 * C G A T C A T G A C T G C G A T A C T G C T A G A C T G C T A G C A T G G T A C 1e-9-2.170e+012.57%0.50%48.6bp (62.0bp)ZNF740/MA0753.2/Jaspar(0.761)
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motif file (matrix)
12 * T G C A C G T A C T A G A T G C G T A C G C T A A G C T A T C G A T G C T G A C 1e-8-2.065e+019.26%4.52%49.2bp (55.9bp)SP1/MA0079.4/Jaspar(0.688)
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motif file (matrix)
13 * T A C G G C A T A T G C C A G T A T G C G C A T T A G C G A C T A T G C A G C T A G T C G A C T 1e-8-2.025e+014.35%1.42%51.2bp (60.8bp)PRDM1/MA0508.3/Jaspar(0.690)
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motif file (matrix)
14 * C G T A C G T A A G T C A C G T C G T A C G T A C G T A C G T A A C G T A G T C A G T C A C G T 1e-8-1.907e+010.45%0.00%42.0bp (55.8bp)PH0167.1_Tcf1/Jaspar(0.594)
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motif file (matrix)
15 * G T C A A T C G A C T G G T C A A C T G C A T G C A G T G T C A 1e-8-1.890e+0110.49%5.59%59.1bp (58.4bp)ZKSCAN1/MA1585.1/Jaspar(0.735)
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motif file (matrix)
16 * C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A 1e-8-1.853e+012.57%0.59%46.2bp (59.0bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.723)
More Information | Similar Motifs Found
motif file (matrix)
17 * G C A T A G C T T G A C A G C T T A G C T C A G A C G T A T G C G A T C G A T C 1e-7-1.673e+013.01%0.87%60.6bp (59.0bp)ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer(0.722)
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motif file (matrix)
18 * C G T A C G T A A C G T C G T A A G T C A G T C C G T A A G T C C G T A A C G T C G T A A G T C 1e-7-1.631e+010.45%0.01%27.0bp (18.0bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.713)
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motif file (matrix)
19 * C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A G T C A G T C C G T A A G T C 1e-7-1.631e+010.45%0.00%31.4bp (14.0bp)Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer(0.705)
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motif file (matrix)
20 * T C A G C A G T T C A G C G A T T C A G C A G T T C A G C A G T C T A G C G A T C T A G C A G T 1e-7-1.629e+018.37%4.34%44.9bp (76.8bp)KLF9/MA1107.2/Jaspar(0.701)
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motif file (matrix)
21 * G A C T C A G T C G A T C A G T C A T G G A T C G C A T C T A G C G A T G A C T 1e-7-1.616e+014.69%1.86%57.7bp (59.3bp)ZNF341/MA1655.1/Jaspar(0.788)
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motif file (matrix)
22 * A G T C A G T C C G T A A C G T A C T G A G T C C G T A C T G A A C T G A G T C C G T A A C T G 1e-6-1.470e+010.45%0.01%62.0bp (52.7bp)SD0002.1_at_AC_acceptor/Jaspar(0.571)
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motif file (matrix)
23 * A C G T C G T A A C G T A G T C A G T C A T G C A C G T C G T A 1e-5-1.336e+012.34%0.68%58.0bp (56.5bp)SD0003.1_at_AC_acceptor/Jaspar(0.682)
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motif file (matrix)
24 * A C G T C T G A A G C T A G T C G C T A A T G C C G A T A C T G C G T A A G T C C A G T C T A G 1e-5-1.313e+011.23%0.19%47.8bp (56.9bp)PB0195.1_Zbtb3_2/Jaspar(0.637)
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motif file (matrix)
25 * A G T C C G T A A C T G A C T G A C T G C G T A A G T C A C T G A C T G A T G C 1e-5-1.269e+010.45%0.01%64.5bp (57.1bp)PB0110.1_Bcl6b_2/Jaspar(0.658)
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motif file (matrix)
26 * C G T A A G T C A G T C A C G T A G T C C G T A A G T C G T A C A C T G C G A T 1e-5-1.257e+011.00%0.13%53.4bp (57.1bp)RUNX3/MA0684.2/Jaspar(0.714)
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motif file (matrix)
27 * C T A G C T A G C A T G C A G T C G A T A C G T A G C T C G A T C G A T A C G T G A C T C G A T 1e-4-1.127e+015.47%2.82%53.8bp (53.6bp)ZNF384/MA1125.1/Jaspar(0.850)
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motif file (matrix)
28 * C G A T A G T C A C G T C T G A C G T A A G T C A C G T A C T G A C G T A C G T 1e-4-1.105e+010.67%0.06%73.7bp (47.0bp)PB0046.1_Mybl1_1/Jaspar(0.700)
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motif file (matrix)
29 * A G T C A C G T C T G A C T G A A C G T A G T C A C G T C G A T C G T A A G T C 1e-4-1.084e+011.00%0.16%52.7bp (56.9bp)GATA1/MA0035.4/Jaspar(0.824)
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motif file (matrix)
30 * A G T C T A C G C T A G A T C G A G T C T C G A T C A G T C A G 1e-4-1.055e+0111.16%7.35%55.0bp (55.9bp)THAP1/MA0597.1/Jaspar(0.723)
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motif file (matrix)
31 * A G T C C G T A A C T G A C G T A C G T A C T G A C T G A G T C C G T A A C G T 1e-4-1.046e+010.56%0.04%54.5bp (46.1bp)Hic1/MA0739.1/Jaspar(0.833)
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motif file (matrix)
32 * A C G T C G T A C G T A C G A T C G T A A C G T C T A G A G T C A C G T C G T A C G T A A G T C 1e-4-1.044e+010.33%0.01%69.0bp (56.0bp)MAFF/MA0495.3/Jaspar(0.715)
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motif file (matrix)
33 * A C T G C G A T A G T C A G T C C G T A A G C T A G T C C G T A A T G C A G T C 1e-2-6.733e+000.78%0.18%53.5bp (63.5bp)SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar(0.649)
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motif file (matrix)
34 * A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C T G A G T C C T G A 1e-2-5.119e+000.22%0.01%50.9bp (66.0bp)ZSCAN29/MA1602.1/Jaspar(0.681)
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motif file (matrix)
35 * A C G T A C G T A C G T C G T A A C T G A G T C A G T C A G T C A T G C C G T A A C T G A C T G 1e-1-3.976e+000.11%0.00%31.1bp (0.0bp)PB0088.1_Tcfap2e_1/Jaspar(0.724)
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motif file (matrix)