Information for 8-TATACSCA (Motif 27)

A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A
Reverse Opposite:
A C G T A C T G A T C G A C T G A C G T C G T A A C G T C G T A
p-value:1e-3
log p-value:-7.454e+00
Information Content per bp:1.885
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif1047.5
Percentage of Background Sequences with motif2.16%
Average Position of motif in Targets98.4 +/- 53.7bp
Average Position of motif in Background98.6 +/- 58.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------TATACSCA---
ATGGGATATATCCGCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TATACSCA------
AAGCATACGCCCAACTT
A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:3
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TATACSCA---
ANANNTGATACCCNATN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.62
Offset:-10
Orientation:reverse strand
Alignment:----------TATACSCA
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.61
Offset:-10
Orientation:reverse strand
Alignment:----------TATACSCA
NNNNNNCTTTTATAN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

PH0162.1_Six2/Jaspar

Match Rank:6
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------TATACSCA---
ANANGTGATACCCCATT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

ZSCAN29/MA1602.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATACSCA--
CGTCTACACGGG
A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TATACSCA---
AATNTTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TATACSCA---
ANNNATGATACCCCATC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Six3/MA0631.1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TATACSCA---
ANANGTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G A T C G T A A G T C A T G C A G T C G T C A A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C