Information for 19-CAGTCAATTTCC (Motif 19)

A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C T G C G T A A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.019e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAGTCAATTTCC
--GGGAATTTCC
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CAGTCAATTTCC
-RRTCAATA---
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C
A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CAGTCAATTTCC---
-----ATTTTCCATT
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------CAGTCAATTTCC--
NNCNNNCNCANACAATTAGNAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAGTCAATTTCC---
-----ATTTTCCATT
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

PH0009.1_Bsx/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCAATTTCC--
NTNAGNTAATTACCTN
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

PH0024.1_Dlx5/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCAATTTCC--
NANNGNTAATTACCNN
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CAGTCAATTTCC----
------ATTTCCTGTN
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

NFATC4/MA1525.1/Jaspar

Match Rank:9
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CAGTCAATTTCC---
-----ATTTTCCATN
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------CAGTCAATTTCC
AAGCACCTGTCAATAT--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A G T C
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T