Information for 10-GCCGAGGTCA (Motif 20)

A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.272e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background103.2 +/- 73.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGGTCA
NRBCARRGGTCA
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCCGAGGTCA-
-CAAAGGTCAG
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GCCGAGGTCA
--TRAGGTCA
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GCCGAGGTCA
--AGRGGTCA
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

NR2C1/MA1535.1/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GCCGAGGTCA-
--CGAGGTCAC
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GCCGAGGTCA
GKBCARAGGTCA
A C G T A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCCGAGGTCA-
-TCAAGGTCAN
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:8
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCCGAGGTCA-
NBYCAAGGTCAC
A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:9
Score:0.74
Offset:3
Orientation:forward strand
Alignment:GCCGAGGTCA-
---GAGGTCAT
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GCCGAGGTCA
----AGGTCA
A C T G A G T C A G T C A C T G C G T A A C T G A C T G A C G T A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A