Information for 5-GAGTGCTATC (Motif 12)

A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T C G T A A C T G A G T C C G T A A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.348e+01
Information Content per bp:1.949
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets140.0 +/- 41.0bp
Average Position of motif in Background85.6 +/- 71.6bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAGTGCTATC
TTRAGTGSYK--
A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGTGCTATC--
AGATGCAATCCC
A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C A C G T A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGCTATC
TTGAGTGSTT--
A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGCTATC
CTYRAGTGSY---
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGCTATC
CTTGAGTGGCT--
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGTGCTATC
BTBRAGTGSN---
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAGTGCTATC
NNTTGAGTGNN---
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGCTATC
TTAAGTGCTT--
A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGCTATC--
NNAGATNVNWATCTN
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAGTGCTATC------
NNNCTGATATCTCNNNN
A C G T A C T G C G T A A C T G A C G T A C T G G T A C C G A T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C