Information for 1-ACGCAAGGAG (Motif 8)

C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A C G T A C G T A C T G A G T C A C T G A C G T
p-value:1e-3
log p-value:-8.991e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets178.0 +/- 0.0bp
Average Position of motif in Background191.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ACGCAAGGAG
TBGCACGCAA----
A C G T A C G T A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACGCAAGGAG
AAGGCAAGTGT
A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACGCAAGGAG
CACGCA-----
A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ACGCAAGGAG
TTACGTAA----
A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:ACGCAAGGAG---
---CAAGGHCANV
C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

CEBPB/MA0466.2/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACGCAAGGAG
ATTGCGCAAT---
A C G T A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACGCAAGGAG
ATTGCGCAAT---
A C G T A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
T C G A C A G T C A G T C T A G G A T C C T A G G A T C C T G A C G T A A G C T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACGCAAGGAG
TTATGCAAT---
A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ACGCAAGGAG--
-GTCAAGGTCAC
C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

CEBPE/MA0837.1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACGCAAGGAG
ATTGCGCAAT---
A C G T A C G T A C G T C G T A A G T C A C T G A G T C C G T A C G T A A C T G A C T G C G T A A C T G
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T A C G T