| p-value: | 1e-7 |
| log p-value: | -1.749e+01 |
| Information Content per bp: | 1.612 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 0.59% |
| Number of Background Sequences with motif | 2.3 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 154.8 +/- 22.3bp |
| Average Position of motif in Background | 139.2 +/- 45.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 1 |
| Score: | 0.54 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TRTADGYYCG--- AAWCTAGGTCARDNN |
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HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer
| Match Rank: | 2 |
| Score: | 0.54 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TRTADGYYCG- -TWVGGTCCGC |
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|
RORC/MA1151.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.53 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TRTADGYYCG ATAAGTAGGTCA- |
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|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.52 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TRTADGYYCG- NNNNTTGTGTGCTTNN |
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|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.52 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TRTADGYYCG TATAAGTAGGTCAA |
|
|
|
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 6 |
| Score: | 0.52 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TRTADGYYCG --TAATCCCN |
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|
|
ZKSCAN1/MA1585.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.50 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TRTADGYYCG ATAGTAGGTG-- |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 8 |
| Score: | 0.50 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TRTADGYYCG AAYTAGGTCA- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 9 |
| Score: | 0.50 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TRTADGYYCG AAYTAGGTCA- |
|
|
|
PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.49 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TRTADGYYCG--- NNNGTAACTANGNNA |
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