Information for 23-CAACAAAATTTC (Motif 24)

A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G
p-value:1e-3
log p-value:-9.177e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background191.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13/MA0901.2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CAACAAAATTTC
AACCAATAAAATTT-
A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAATTTC
AACCCAATAAAATTCG
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAATTTC
CTACCAATAAAATTCT
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAATTTC-
AATGCAATAAAATTTAT
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAACAAAATTTC
-AACAAT-----
A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAACAAAATTTC
GATACAAAGTATC
A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

CDX2/MA0465.2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAACAAAATTTC
AAGCAATAAAAA---
A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A A C G T A C G T A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAACAAAATTTC
CCCAATAAAAC---
A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CAACAAAATTTC
AAAGGTAATAAAATTT-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAATTTC
CAAACAACAACACCT-
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A G T C
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T