Information for 25-CGCAGCTGCAGG (Motif 31)

A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G
p-value:1e-3
log p-value:-8.385e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets180.0 +/- 0.0bp
Average Position of motif in Background84.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CGCAGCTGCAGG
CGCAGCTGCG--
A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CGCAGCTGCAGG
DGCAGCTGCYSS
A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CGCAGCTGCAGG
NNCAGCTGNN--
A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T A C G T

ASCL1/MA1100.2/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CGCAGCTGCAGG
GGCAGCTGCC--
A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C A C G T A C G T

MYOG/MA0500.2/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCTGCAGG
NNGCAGCTGCNN-
A C G T A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-CGCAGCTGCAGG
NNACAGCTGC---
A C G T A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGCAGCTGCAGG
-NCAGCTGCTG-
A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----CGCAGCTGCAGG-
NNNNAGCAGCTGCTGAN
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGCAGCTGCAGG
AGCAGCTGCTNN
A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

NHLH2/MA1529.1/Jaspar

Match Rank:10
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CGCAGCTGCAGG--
GGGACGCAGCTGCGNCCC
A C G T A C G T A C G T A C G T A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C G T A C G T
C T A G C A T G C A T G T C G A G T A C C T A G A T G C T C G A A T C G T A G C G A C T C T A G G T A C A C T G C T A G G A T C G T A C G A T C