Information for 4-GCGTTGCTCYCC (Motif 4)

T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
Reverse Opposite:
C A T G C T A G C T A G T A C G C G T A T A C G G T A C G C T A C G T A G T A C C T A G A G T C
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.628
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif2225.0
Percentage of Background Sequences with motif2.69%
Average Position of motif in Targets120.2 +/- 55.7bp
Average Position of motif in Background101.9 +/- 83.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGTTGCTCYCC
-CGTTGCTAT--
T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCGTTGCTCYCC
YCTTTGTTCC--
T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GCGTTGCTCYCC
-----GCTCCG-
T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCGTTGCTCYCC-
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

ZNF16/MA1654.1/Jaspar

Match Rank:5
Score:0.58
Offset:-8
Orientation:reverse strand
Alignment:--------GCGTTGCTCYCC---
AAAACCTTCCATGGCTCCCTATT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C A C G T A C G T A C G T
T C G A T C G A T G C A T C G A G A T C G A T C G A C T A G C T A G T C G T A C C T G A A C G T C T A G C T A G G A T C A G C T A T G C G T A C G A T C G A C T T G C A A G C T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCGTTGCTCYCC
-CNGTCCTCCC-
T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCGTTGCTCYCC-
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX8/MA0868.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCGTTGCTCYCC
CCATTGTTCT--
T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTGCTCYCC
NCCTTTGTTC---
A C G T T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCGTTGCTCYCC
---TTGTTTAC-
T C A G G A T C C A T G A C G T C A G T A C T G A G T C C G A T A G T C G A T C A G T C G A T C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T