| p-value: | 1e-9 |
| log p-value: | -2.105e+01 |
| Information Content per bp: | 1.839 |
| Number of Target Sequences with motif | 17.0 |
| Percentage of Target Sequences with motif | 4.68% |
| Number of Background Sequences with motif | 328.6 |
| Percentage of Background Sequences with motif | 0.67% |
| Average Position of motif in Targets | 88.9 +/- 60.7bp |
| Average Position of motif in Background | 98.5 +/- 65.3bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0082.1_Irx2/Jaspar
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TATACATGGA----- TAAATACATGTAAAATT |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TATACATGGA GHATATKCAT--- |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TATACATGGA GAATATTCAT--- |
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|
|
PH0084.1_Irx3_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TATACATGGA----- AATATACATGTAATATA |
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|
|
PH0083.1_Irx3_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TATACATGGA----- AAAATACATGTAATACT |
|
|
|
PH0087.1_Irx6/Jaspar
| Match Rank: | 6 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TATACATGGA----- AAAATACATGTAAAAAT |
|
|
|
PH0086.1_Irx5/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TATACATGGA----- AATATACATGTAAAATT |
|
|
|
PH0085.1_Irx4/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TATACATGGA---- NNTTTTACATGTANNNT |
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|
|
MEF2D/MA0773.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.65 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TATACATGGA ACTATAAATAGA |
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|
|
FOXA1/MA0148.4/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TATACATGGA ATGTAAACATGT- |
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