Information for 1-CGACACTGGT (Motif 25)

A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C T G
p-value:1e-4
log p-value:-9.216e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF6/MA1509.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGACACTGGT
ACCGAAACT---
A C G T A C G T A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T
T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGACACTGGT-
AAACAATGGAA
A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGACACTGGT-----
CAATCACTGGCAGAAT
A C G T A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGACACTGGT
VVRRAACAATGG-
A C G T A C G T A C G T A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G A C G T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGACACTGGT-
AAACAATGGCA
A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGACACTGGT
-GACAATGNN
A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T
A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGACACTGGT
-RACAAWGG-
A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T
A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGACACTGGT
VRAACAATGG-
A C G T A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CGACACTGGT
ATAAACCGAAACCAA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A A C G T

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CGACACTGGT--
CTGATCGAAACCAAAGT
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C T G A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T