Information for 5-CTCCACAT (Motif 39)

A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A C T G C G T A A C T G
p-value:1e-1
log p-value:-2.561e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif13689.0
Percentage of Background Sequences with motif17.23%
Average Position of motif in Targets107.8 +/- 37.4bp
Average Position of motif in Background99.3 +/- 89.8bp
Strand Bias (log2 ratio + to - strand density)-3.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTCCACAT
ATCCAC--
A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

MXI1/MA1108.2/Jaspar

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTCCACAT---
-GACACATGGC
A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTCCACAT
TCCAATCCACA-
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCCACAT--
NWAACCACADNN
A C G T A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CTCCACAT-
SSAATCCACANN
A C G T A C G T A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ZBTB26/MA1579.1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCCACAT-----
TACTCCAGAAAAGAT
A C G T A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTCCACAT-----
-ACCACATCCTGT
A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

TWIST1/MA1123.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCCACAT----
ATTCCAGATGTTT
A C G T A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCCACAT---
-ACCATATGTT
A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

CREB3L4/MA1474.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCCACAT----
TGCCACGTCACC
A G T C A C G T A G T C A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G T A C G T A C T C G A A G T C T C A G A G C T T A G C T C G A A G T C A T G C