Information for 20-AATGTCAGTA (Motif 27)

C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.234e+00
Information Content per bp:1.969
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets102.6 +/- 40.0bp
Average Position of motif in Background99.6 +/- 53.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATGTCAGTA
-NTGTCAN--
C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATGTCAGTA--
TNGAATTTCATTNAN
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

NR4A1/MA1112.2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AATGTCAGTA
TTAAAGGTCAAA-
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATGTCAGTA
RHTGWCAR--
C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AATGTCAGTA
CAAAGGTCAAA-
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AATGTCAGTA-
TATGTAAATAT
C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A A C G T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----AATGTCAGTA
ANGNAAAGGTCA---
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AATGTCAGTA
--TGTCANYT
C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AATGTCAGTA
TCAAGGTCAN--
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATGTCAGTA
VBTGWCAGCB
C G T A C G T A A C G T A C T G A C G T A G T C G T C A A C T G A C G T C G T A
T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C