Information for 23-GGAGACTAAG (Motif 37)

A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C
p-value:1e-2
log p-value:-6.583e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background130.5 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGAGACTAAG----
AAACAGACAAAGGAAT
A C G T A C G T A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGAGACTAAG-
-AAAACAAAGG
A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

ZNF460/MA1596.1/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGAGACTAAG--
CTCGGGAGGCTGAGGC
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T A C G T
A G T C A G C T A G T C T C A G T A C G T A C G G T C A T A C G T C A G G A T C A C G T T A C G T C G A T A C G T A C G A G T C

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGAGACTAAG--
-AAAACAAAGAA
A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T A C G T
A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGACTAAG
BCAGACWA--
A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGAGACTAAG-
-GGAACAAAGR
A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGAGACTAAG---
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGAGACTAAG-
-AAAACAATGG
A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGAGACTAAG---
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GGAGACTAAG---
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A A C T G A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T