Information for 1-AGTTTCGAAA (Motif 1)

C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A G T C A C G T
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTCGAAA--
TNTGGTTTCGATACN
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

IRF6/MA1509.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:AGTTTCGAAA
AGTTTCGGT-
C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A
C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCGAAA---
NTGGTTTCGGTTNNN
A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTCGAAA--
NNNTTGGTTTCGNTNNN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCGAAA---
TNAGTTTCGATTTTN
A C G T A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGTTTCGAAA
CGGTTTCAAA-
A C G T C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T

CEBPE/MA0837.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTTTCGAAA-
-ATTGCGCAAT
C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T
A C G T T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBPB/MA0466.2/Jaspar

Match Rank:8
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTTTCGAAA-
-ATTGCGCAAT
C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T
A C G T T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTTTCGAAA-
-GTTGCGCAAT
C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTTTCGAAA-
-ATTGCGCAAT
C G T A A C T G A C G T A C G T A C G T A G T C A C T G C G T A C G T A C G T A A C G T
A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T