Information for 25-ATGTAATGGGCT (Motif 25)

C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A G T C C G T A A C G T A C G T C G T A A G T C C G T A A C G T
p-value:1e-5
log p-value:-1.182e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BSX/MA0876.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATGTAATGGGCT
--NTAATTGG--
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATGTAATGGGCT
--NTAATGAGCT
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

NKX6-3/MA1530.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGTAATGGGCT
-TTTAATGAN--
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T A C G T

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGTAATGGGCT
NNCTAATGGNN-
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATGTAATGGGCT
-GKTAATGR---
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGTAATGGGCT
--ATAATGAGGT
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T

HOXA7/MA1498.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATGTAATGGGCT
--GTAATTGC--
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A T C G A C G T G T C A C G T A C G A T A C G T T C A G T A G C A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATGTAATGGGCT
--NTAATTGN--
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATGTAATGGGCT
--GTAATTGC--
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ATGTAATGGGCT
-GTTAATGGCC-
C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C T G A C T G A C T G A G T C A C G T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T