| p-value: | 1e-5 |
| log p-value: | -1.285e+01 |
| Information Content per bp: | 1.872 |
| Number of Target Sequences with motif | 21.0 |
| Percentage of Target Sequences with motif | 1.79% |
| Number of Background Sequences with motif | 257.0 |
| Percentage of Background Sequences with motif | 0.54% |
| Average Position of motif in Targets | 103.9 +/- 55.9bp |
| Average Position of motif in Background | 101.3 +/- 54.7bp |
| Strand Bias (log2 ratio + to - strand density) | -1.8 |
| Multiplicity (# of sites on avg that occur together) | 1.67 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AACCCTAAAA VGCCATAAAA |
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PH0064.1_Hoxb9/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AACCCTAAAA---- AGAGCCATAAAATTCG |
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|
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AACCCTAAAA-- NGYCATAAAWCH |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AACCCTAAAA KGCCATAAAA |
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|
|
HOXD12/MA0873.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AACCCTAAAA- AGTCGTAAAAA |
|
|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AACCCTAAAA- -GTCATAAAAN |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AACCCTAAAA- GGCCATAAAAC |
|
|
|
HOXA13/MA0650.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AACCCTAAAA- CCCAATAAAAC |
|
|
|
PH0056.1_Hoxa9/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AACCCTAAAA----- ACGGCCATAAAATTAAT |
|
|
|
HOXC12/MA0906.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AACCCTAAAA- GGTCGTAAAAA |
|
|
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