Information for 4-CATTGTGTTGAG (Motif 5)

A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
Reverse Opposite:
A G T C A C G T G A T C G C T A C G T A A G T C C G T A A G T C T G C A G T C A C G A T A T C G
p-value:1e-4
log p-value:-9.978e+00
Information Content per bp:1.685
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif1943.7
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets104.2 +/- 38.8bp
Average Position of motif in Background95.8 +/- 88.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CATTGTGTTGAG
NNNCCATTGTGTNAN-
A C G T A C G T A C G T A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CATTGTGTTGAG
NNCCATTGTNN----
A C G T A C G T A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CATTGTGTTGAG
NNCCATTGTNN----
A C G T A C G T A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATTGTGTTGAG
CTCATTGTC-----
A C G T A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CATTGTGTTGAG
BCCWTTGTBYKV--
A C G T A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A T G C G A C T A C T G T A C G A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATTGTGTTGAG
GCATTGTN-----
A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CATTGTGTTGAG-----
NNCTTTGTTTTGNTNNN
A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATTGTGTTGAG
CCATTGTTYB---
A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CATTGTGTTGAG
ACTTCCTGTT---
A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATTGTGTTGAG
CCWTTGTYYB---
A C G T A T G C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G A T C A T G T C G A A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T