| p-value: | 1e-7 |
| log p-value: | -1.761e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 0.26% |
| Number of Background Sequences with motif | 10.3 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 84.8 +/- 47.2bp |
| Average Position of motif in Background | 133.5 +/- 42.8bp |
| Strand Bias (log2 ratio + to - strand density) | -2.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.87 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAATGAA- -GGYAATGAAA |
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Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.75 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAATGAA- -GGCMATGAAA |
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|
|
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
| Match Rank: | 3 |
| Score: | 0.74 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAATGAA -GKTAATGR- |
|
|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGTAATGAA-- HDGYAATGAAAN |
|
|
|
PH0012.1_Cdx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGGTAATGAA---- TAAGGTAATAAAATTA |
|
|
|
POU6F1(var.2)/MA1549.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.71 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGGTAATGAA-- --ATAATGAGGT |
|
|
|
MEOX2/MA0706.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAATGAA- -AGTAATTAAC |
|
|
|
PH0013.1_Cdx2/Jaspar
| Match Rank: | 8 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGGTAATGAA---- AAAGGTAATAAAATTT |
|
|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.70 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGGTAATGAA --NTAATGAN |
|
|
|
HOXB7/MA1501.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGTAATGAA- -GGTAATTAAC |
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