Information for 1-ATTCGGTC (Motif 5)

C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C
Reverse Opposite:
A C T G C G T A A T G C A G T C A T C G C G T A C G T A A G C T
p-value:1e-8
log p-value:-1.890e+01
Information Content per bp:1.808
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif4.77%
Number of Background Sequences with motif912.7
Percentage of Background Sequences with motif1.89%
Average Position of motif in Targets91.8 +/- 63.5bp
Average Position of motif in Background100.8 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTCGGTC
CCGATTGGCT-
A C G T A C G T A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ATTCGGTC--
TGATTGGCTANN
A C G T A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTCGGTC--
WAABTAGGTCAV
A C G T A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

PH0026.1_Duxbl/Jaspar

Match Rank:4
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------ATTCGGTC-
NNNNGTTGATTGGGTCG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ATTCGGTC--
TATAAGTAGGTCAA
A C G T A C G T A C G T A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

NFYC/MA1644.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTCGGTC
NCTGATTGGNN-
A C G T A C G T A C G T A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTCGGTC-
AAYTAGGTCA
A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C A C G T
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATTCGGTC-
AAYTAGGTCA
A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C A C G T
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

NFYA/MA0060.3/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATTCGGTC
NCTGATTGGNN-
A C G T A C G T A C G T A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T A C G T

RORB/MA1150.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATTCGGTC--
AATTAGGTCAC
A C G T C T G A C G A T A C G T A T G C A C T G A T C G A C G T G T A C A C G T A C G T
C G T A G C T A C G A T A C G T C T G A A C T G C T A G A G C T G A T C C T G A G A T C