Information for 6-CGAACAGCATCT (Motif 6)

A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C T G A G T C A C G T A C T G A C G T A C G T A G T C A C T G
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF341/MA1655.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CGAACAGCATCT
GGGAACAGCCAC-
A C G T A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGAACAGCATCT
GGAACAGCCG--
A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGAACAGCATCT
TGGAACAGMA---
A C G T A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGAACAGCATCT----
-GAACADWATGTTCTT
A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGAACAGCATCT----
-GVACAGNMTGTYCTB
A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGAACAGCATCT----
-GRACAGWMTGTYCTB
A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGAACAGCATCT----
---NNAACATCTGTNN
A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

HAND2/MA1638.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CGAACAGCATCT---
-----NNCATCTGNN
A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGAACAGCATCT
--ANCAGGATGT
A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T
A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

SOX12/MA1561.1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGAACAGCATCT
ACCGAACAATG---
A C G T A C G T A G T C A C T G C G T A C G T A A G T C C G T A A C T G A G T C C G T A A C G T A G T C A C G T
G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G A C G T A C G T A C G T