Information for 6-GTCCTGCTCTAA (Motif 6)

A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G C G T A A G T C
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets138.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTCCTGCTCTAA
NNCCTGCTGNG-
A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTGCTCTAA-
CCCCCTGCTGTGNN
A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCCTGCTCTAA
ACATCCTGNT----
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTCCTGCTCTAA-
NNAGTCCCACTCNNNN
A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTGCTCTAA
GGTCCCGCCC---
A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A
A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTGCTCTAA--
NNTCCTGCTGTGNNN
A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCCTGCTCTAA--
TNTCCTGCTGTGNNG
A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

IKZF1/MA1508.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTCCTGCTCTAA
NCTTCCTGTTNN--
A C G T A C G T A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A
T C G A A G T C G C A T A G C T A G T C G A T C G C A T A T C G A G C T A C G T A G C T A G T C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTCCTGCTCTAA----
----GGCTCYAKCAYC
A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTCCTGCTCTAA
CACCTACTAT--
A C T G A C G T A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T C G T A C G T A
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T