| p-value: | 1e-4 |
| log p-value: | -9.274e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 21.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGAGCTTTGGGG CTGACCTTTG--- |
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PB0053.1_Rara_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TGAGCTTTGGGG NNNGTGACCTTTGNNN |
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|
PB0049.1_Nr2f2_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TGAGCTTTGGGG NNNNTGACCTTTNNNN |
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NR4A1/MA1112.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TGAGCTTTGGGG NNTGACCTTTNN-- |
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NR2F2/MA1111.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TGAGCTTTGGGG NNTGACCTTTN--- |
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|
|
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGAGCTTTGGGG TTGAMCTTTG--- |
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|
HNF4A(var.2)/MA1494.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TGAGCTTTGGGG-- NTGACCTTTGGACCC |
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|
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGAGCTTTGGGG TGACCTTTNCNT |
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|
|
NR1I3/MA1534.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGAGCTTTGGGG ATGAACTTT---- |
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HNF4A/MA0114.4/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TGAGCTTTGGGG NNTGGACTTTGNN- |
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