Information for 3-CTCAAAGTCG (Motif 10)

A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C A C G T A C G T A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-8.387e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets138.0 +/- 0.0bp
Average Position of motif in Background30.3 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF7/MA0769.2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CTCAAAGTCG
ANATCAAAGNN-
A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTCAAAGTCG---
TCCAAAGTCCAGA
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CTCAAAGTCG---
TCCAAAGTCCAAA
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

PB0136.1_IRC900814_2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCAAAGTCG-----
ATGGAAAGTCGTAAAA
A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

ESRRA/MA0592.3/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCAAAGTCG--
GCTCAAGGTCACA
A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

ESRRB/MA0141.3/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTCAAAGTCG--
-TCAAGGTCATA
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T
A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAGTCG-----
TATTCAAGGTCATGCGA
A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCAAAGTCG
NTCAAGGTCA
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

NR5A1/MA1540.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCAAAGTCG-
GTCAAGGTCAC
A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G A C G T
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTCAAAGTCG
ACATCAAAGG--
A C G T A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C T G A C G T A G T C A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T