Information for 16-GATTATTGCAGA (Motif 19)

A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C C G T A C G T A A C G T C G T A C G T A A C G T A G T C
p-value:1e-4
log p-value:-9.644e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background180.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATTATTGCAGA
NTTTTATTGCNN-
A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T A C G T

CEBPA/MA0102.4/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GATTATTGCAGA----
--TTATTGCACAATAT
A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C A G T T C G A G C A T C A G T C A T G G A T C C T G A G A T C G T C A C G T A A G C T G C T A G C A T

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GATTATTGCAGA
AATTATT-----
A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T

CEBPD/MA0836.2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GATTATTGCAGA----
---TATTGCACAATAT
A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATTATTGCAGA
CGGATTAN------
A C G T A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0126.1_Obox6/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------GATTATTGCAGA
AAAAACGGATTATTG----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATTATTGCAGA
RGGATTAR------
A C G T A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GATTATTGCAGA--
ANATTTTTGCAANTN
A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NFIL3/MA0025.2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GATTATTGCAGA---
--NNATTGCATAANN
A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A

PITX2/MA1547.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATTATTGCAGA
GGGATTAN------
A C G T A C G T A C T G C G T A A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C T G C G T A
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T