| p-value: | 1e-4 |
| log p-value: | -1.054e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 184.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.75 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC -GGYAATGAAA- |
|
|
|
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC -RGCAATNAAA- |
|
|
|
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC -GGCMATGAAA- |
|
|
|
NFYB/MA0502.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGGCAATGAAGC NTGGCCAATGAG-- |
|
|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC HDGYAATGAAAN |
|
|
|
CDX2/MA0465.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC AAGCAATAAAAA |
|
|
|
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGGCAATGAAGC----- NGTGTTCAVTSAAGCGKAAA |
|
|
|
CDX4/MA1473.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC -GGCAATAAAAC |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC -GGCCATAAAAC |
|
|
|
HOXD13/MA0909.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GGGCAATGAAGC -CCCAATAAAAC |
|
|
|