Information for 20-GGAGCGTTCAGG (Motif 23)

A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C T G A G T C A C G T A G T C A G T C
p-value:1e-3
log p-value:-8.955e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGTTCAGG
CGGAGC-------
A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GGAGCGTTCAGG
--TGAGTTCA--
A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCGTTCAGG----
TTCTAGAANNTTCCAGAANN
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

BARHL1/MA0877.2/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGAGCGTTCAGG
---NCGTTTAN-
A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T A C G T G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T

HSF4/MA0771.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGAGCGTTCAGG--
-GAANNTTCTAGAA
A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGAGCGTTCAGG
--ANCGTTTANN
A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

NR1I3/MA1534.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGAGCGTTCAGG
--AAAGTTCAT-
A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G
A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGAGCGTTCAGG---
GGCGAGGGGTCAAGGGC
A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGTTCAGG--
TAGAANVTTCTAGAA
A C G T A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

HSF1/MA0486.2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GGAGCGTTCAGG--
-GAACGTTCTAGAA
A C T G A C T G C G T A A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A C T G A C G T A C G T
A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A