Information for 5-TMTGWRKAMTWY (Motif 5)

A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T
Reverse Opposite:
T C G A C G A T C G T A A C G T A G C T T G A C G A T C C G T A A G T C C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.293e+01
Information Content per bp:1.764
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2225.0
Percentage of Background Sequences with motif2.55%
Average Position of motif in Targets66.5 +/- 40.1bp
Average Position of motif in Background97.4 +/- 79.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TMTGWRKAMTWY
NNTGTGGATTSS
A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TMTGWRKAMTWY-
AAAATATGCATAATAAA
A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TMTGWRKAMTWY-
-ATGCATAATTCA
A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T A C G T
A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TMTGWRKAMTWY-
--TGTGGATTNNN
A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TMTGWRKAMTWY
NNNNTTTGTTTACNNT
A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TMTGWRKAMTWY
-ATGAATATTC-
A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T
A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TMTGWRKAMTWY
TTCTNMGGAA---
A C G T A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TMTGWRKAMTWY----
-ATGAATWATTCATGA
A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T A C G T A C G T A C G T A C G T
A C G T G T C A A C G T C T A G G T C A C G T A G C A T C G T A C G T A G C A T C A G T A G T C C G T A C A G T C T A G C T G A

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TMTGWRKAMTWY
ANTTCTCAGGAANNN
A C G T A C G T A C G T A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

FOXP1/MA0481.3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TMTGWRKAMTWY
NNTGTTTACNN-
A C G T G T A C A C G T A C T G G C A T C T A G A C T G C T G A G T C A C G A T C G T A A G C T
C G A T C G T A C G A T T C A G C G A T C A G T C A G T G C T A G A T C G C T A G C A T A C G T