Information for 5-CATACACAGA (Motif 12)

A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
Reverse Opposite:
A C G T T A G C G A C T T A C G C G A T A T C G C A G T G T C A A C G T T C A G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.652
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif11.08%
Number of Background Sequences with motif2428.5
Percentage of Background Sequences with motif5.09%
Average Position of motif in Targets103.9 +/- 52.3bp
Average Position of motif in Background102.0 +/- 66.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATACACAGA
TCCAATCCACA--
A C G T A C G T A C G T A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CATACACAGA
-GTAAACA--
A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATACACAGA
WWATRTAAACAN-
A C G T A C G T A C G T A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATACACAGA----
AAAGTAAACAAAAATT
A C G T A C G T A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A A C G T A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxf1/MA1606.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATACACAGA
ATGTAAACAAA
A C G T A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CATACACAGA
SSAATCCACANN
A C G T A C G T A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CATACACAGA
----CACAGN
A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

MF0005.1_Forkhead_class/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CATACACAGA
AAATAAACA--
A C G T A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CATACACAGA-
AAAACAAAGAA
A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CATACACAGA
-GTAAACAA-
A G T C T G C A C A G T G T C A T A G C G C T A A T G C C T G A A T C G T G C A
A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T