Information for 22-ACCAGGGCAA (Motif 37)

C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C T G A C G T
p-value:1e-3
log p-value:-7.386e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets99.5 +/- 56.7bp
Average Position of motif in Background84.8 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX3/MA0798.2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACCAGGGCAA---
TNCCATAGCAACNN
A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACCAGGGCAA
WDNCTGGGCA-
A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:3
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------ACCAGGGCAA
NNAGGGACAAGGGCNC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACCAGGGCAA--
TTGCCATGGCAACN
A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--ACCAGGGCAA--
TTGCCATGGCAACC
A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A G A T C G T A C

RFX1/MA0509.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACCAGGGCAA---
TNCCATAGCAACNN
A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACCAGGGCAA-
KGTTGCCATGGCAAC
A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACCAGGGCAA---
GTTGCCATGGCAACCG
A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C G T A C G T
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

RFX5/MA0510.2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ACCAGGGCAA--
NGTTGCCATGGCAACG
A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T A C G T
A T G C C T A G A C G T G A C T C T A G A G T C A G T C C G T A G C A T T C A G T C A G G A T C C T G A T C G A G A T C T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ACCAGGGCAA-
-CAAGGHCANV
C G T A A G T C A G T C C G T A A C T G A C T G A C T G A G T C C G T A C G T A A C G T
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G