Information for 9-TGGCCACTGGTC (Motif 11)

A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C C G T A A C T G A C G T A C T G A C T G A G T C A G T C C G T A
p-value:1e-3
log p-value:-9.011e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets142.0 +/- 0.0bp
Average Position of motif in Background97.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGGCCACTGGTC
TYTGACCASWRG--
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G A C G T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCACTGGTC
NTGGCCAATGAG-
A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGCCACTGGTC--
TCACCTCTGGGCAG
A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Plagl1/MA1615.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCACTGGTC
NNTGGCCCCAGNN-
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGGCCACTGGTC
ACTAGCCAATCA--
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCACTGGTC-
NAGGTCANTGACCT
A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGGCCACTGGTC
--GCAACAGGTG
A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C
A C G T A C G T A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCCACTGGTC----
TGGACTTTGNNCTNTG
A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCACTGGTC--
CNNNGCTACTGTANNN
A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGCCACTGGTC--
NTGCCCTTGGGCGN
A C G T A C T G A C T G A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C G T A G T C A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G