Information for 14-GGCAATCTCC (Motif 36)

A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-7.671e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background59.7 +/- 46.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGCAATCTCC
GGGAATTTCC
A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCAATCTCC
GGGGGAATCCCC
A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCAATCTCC
GGAAATCCCC
A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFKB1/MA0105.4/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCAATCTCC-
AGGGGAATCCCCT
A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCAATCTCC
GGGAATTTCC
A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCAATCTCC-
AGGGGAATCCCCT
A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MZF1/MA0056.2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGCAATCTCC----
-CAAATCCCCACTT
A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCAATCTCC-
GGGAAATCCCCN
A C G T A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCAATCTCC
AGATGCAATCCC-
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCAATCTCC
GGAAANCCCC
A C T G A C T G A G T C C G T A C G T A A C G T A G T C A C G T A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C