Information for 7-CCGAATCAAT (Motif 24)

A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G C G T A A C G T A C G T A G T C A C T G A C T G
p-value:1e-3
log p-value:-8.382e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CCGAATCAAT
HNRAATCAAT
A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCGAATCAAT----
CGACCCAATCAACGGTG
A C G T A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CCGAATCAAT-
---RRTCAATA
A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CCGAATCAAT--
--DGATCRATAN
A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCGAATCAAT--
--TAATCAATTA
A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

ONECUT1/MA0679.2/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCGAATCAAT-----
AAAAAATCAATAAATA
A C G T A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGAATCAAT
TAAYCYAATCAA-
A C G T A C G T A C G T A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T
G C A T T C G A C T G A G A T C A G T C G A T C G T C A G T C A A C G T A G T C C G T A C T G A A C G T

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCGAATCAAT--
--TAATCGATAA
A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCGAATCAAT------
GAAGATCAATCACTAA
A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CCGAATCAAT
-CCAATCAA-
A G T C A G T C A C T G C G T A C G T A A C G T A G T C C G T A C G T A A C G T
A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T