Information for 12-AAGAGCTACTCC (Motif 17)

C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C G T C G T A A C T G A G T C A C G T A G T C A C G T A C G T
p-value:1e-3
log p-value:-9.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background174.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/MA1657.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGAGCTACTCC
GAAAGAGTTAAA--
A C G T A C G T C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A A C G T A C G T

DPRX/MA1480.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGAGCTACTCC-
---AGATAATCCC
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAGAGCTACTCC
----GCTAATCC
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

PH0035.1_Gsc/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAGAGCTACTCC-----
AATCGTTAATCCCTTTA
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AAGAGCTACTCC----
GNNAGCTAATCCCCCN
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGAGCTACTCC------
-ATAGTTAATCCCCCNNA
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PITX1/MA0682.2/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAGAGCTACTCC-
-----CTAATCCC
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

OTX2/MA0712.2/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AAGAGCTACTCC---
---NNCTAATCCCNN
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAGAGCTACTCC--
----GCTAATCCCC
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAGAGCTACTCC-
---CNGTCCTCCC
C G T A C G T A A C T G C G T A A C T G A G T C A C G T C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C