Information for 5-CTAGGTCCCC (Motif 24)

A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C T G C G T A A G T C A G T C A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.737e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif18.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background72.2 +/- 116.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTAGGTCCCC
TWVGGTCCGC
A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

PLAGL2/MA1548.1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CTAGGTCCCC--
--TGGGCCCCCT
A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTAGGTCCCC--
CAACGTCCGCGG
A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C A C G T A C G T
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTAGGTCCCC--
--AAGACCCYYN
A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTAGGTCCCC
ATCAAGGTCA--
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTAGGTCCCC
AAYTAGGTCA--
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTAGGTCCCC
AAYTAGGTCA--
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTAGGTCCCC
CCCCCTTGGGCCCC
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTAGGTCCCC
--AGGTCA--
A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTAGGTCCCC
TCAAGGTCAN-
A C G T A G T C A C G T C G T A A C T G A C T G A C G T A G T C A G T C A G T C A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T