Information for 21-GAAATTTGTCTA (Motif 23)

A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.644e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAAATTTGTCTA----
NNNNTTTGTTTACNNT
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GAAATTTGTCTA-
-----TWGTCTGV
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POU3F3/MA0788.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAATTTGTCTA--
-AAATTAGCATAAT
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T G C T A G C T A C G T A G A C T G C A T C G T A T C A G G T A C T G C A G C A T G C T A G C T A G C A T

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAAATTTGTCTA--
------TGTCTAGA
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

POU2F3/MA0627.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAAATTTGTCTA--
-NNATTTGCATATN
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T
A C G T C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GAAATTTGTCTA-
---ATTTGCATAT
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GAAATTTGTCTA
--GATTTGCATA
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A
A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

PB0136.1_IRC900814_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAATTTGTCTA-
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

Foxj3/MA0851.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAATTTGTCTA------
-NNNTTTGTTTACNTTNN
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAAATTTGTCTA------
-NNNTTTGTTTACNTTNN
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T