Information for 15-GAGTGAGAAGGC (Motif 15)

A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C G T A G T C
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-8
Orientation:forward strand
Alignment:--------GAGTGAGAAGGC
SMCAGTCWGAKGGAGGAGGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

PBX3/MA1114.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GAGTGAGAAGGC-
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PRDM1/MA0508.3/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGTGAGAAGGC-
--NAGAGAAAGNA
A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T
A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PKNOX1/MA0782.2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGTGAGAAGGC
TTTGAGTGACAGCTA
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GAGTGAGAAGGC
TGCGGAGTGGGACTGG
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGTGAGAAGGC
--CAGATAAGGN
A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C
A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

GATA4/MA0482.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAGTGAGAAGGC-
-NNAGATAAGGNN
A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T
A C G T C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAGAAGGC
NTGATTGACAGN--
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GAGTGAGAAGGC---
TAAACTGATAAGAAGAT
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGAGAAGGC
BTGABTGACAGS--
A C G T A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A C G T A A C T G A C T G A G T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T