Information for 11-TTCTCACGTC (Motif 28)

A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G C G T A C G T A
p-value:1e-3
log p-value:-8.023e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background154.0 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTCTCACGTC----
NNCTCACCTCCTNN
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTCTCACGTC
HTTTCCCASG--
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

TBX18/MA1565.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACGTC-
NTTCACACCTCC
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C A C G T
A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACGTC
KTTCACACCT-
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACGTC
TTTCACACCT-
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCACGTC
TTTCACACCT-
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTCTCACGTC
ATTAACACCT-
A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TTCTCACGTC
--BGCACGTA
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:9
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTCTCACGTC---
---GCACGTACCC
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TTCTCACGTC-
---GCACGTNC
A C G T A C G T A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C