Information for 1-YCACACTTTAKC (Motif 1)

A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
Reverse Opposite:
A T C G G T A C A C G T C G T A C G T A C G T A A C T G C G A T A T C G C G A T A C T G C T A G
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.901
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets112.5 +/- 45.5bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX21/MA0690.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-YCACACTTTAKC
TTCACACCTT---
A C G T A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----YCACACTTTAKC
NTTTTCACACCTT---
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:YCACACTTTAKC
TCACACCT----
A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YCACACTTTAKC
TCACACCT----
A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YCACACTTTAKC
TCACACCT----
A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:YCACACTTTAKC
TCACACCT----
A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--YCACACTTTAKC
KTTCACACCT----
A C G T A C G T A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YCACACTTTAKC
--CCACTTGAA-
A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--YCACACTTTAKC
TTTCACACCTN---
A C G T A C G T A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--YCACACTTTAKC
TTTCACACCT----
A C G T A C G T A G T C A G T C C G T A A T G C C G T A A G T C A C G T A C G T A C G T C G T A A C T G A T G C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T