Information for 1-ATAATAACTATT (Motif 4)

C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C T G A C G T A C G T C G T A A C G T A C G T C G T A A C G T
p-value:1e-4
log p-value:-1.112e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATAATAACTATT-
NTTNAGAACAATTA
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATAATAACTATT
TAATGATGATCACTA--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATAATAACTATT----
GANGTTAACTAGTTTNN
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

ZNF652/MA1657.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATAATAACTATT--
--NTTAACTCTTTN
C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATAATAACTATT-
NNNTAACAATTATAN
A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0069.1_Sox21_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ATAATAACTATT
TTTAATTATAATTAAG
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

MEOX2/MA0706.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATAATAACTATT
NTTAATTACN---
A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATAATAACTATT----
--AAAAACCATTAAGG
C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

HMBOX1/MA0895.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATAATAACTATT
--GTTAACTAGN
C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATAATAACTATT
CAAACAACAACACCT
A C G T A C G T A C G T C G T A A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T