Information for 4-CGCATATCCT (Motif 10)

A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
p-value:1e-3
log p-value:-8.991e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets5.0 +/- 0.0bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGCATATCCT-
AAGATATCCTT
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGCATATCCT-----
GATAACATCCTAGTAG
A C G T A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CGCATATCCT---
---ATTTCCTGTN
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCATATCCT---
-NNAYTTCCTGHN
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCATATCCT--
ACCACATCCTGT
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T
T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGCATATCCT
ANCATATGGT
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCATATCCT---
---ACATCCTGNT
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCATATCCT
ATGMATATDC-
A C G T A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCATATCCT-
NAACATATGTTT
A C G T A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCATATCCT--
--CACTTCCTGT
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T