Information for 19-GCCTTCTCHDTH (Motif 20)

A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
Reverse Opposite:
C A T G C T G A G A C T C G T A A C T G C G T A C T A G C G T A C G T A A C T G A C T G A T G C
p-value:1e-4
log p-value:-1.115e+01
Information Content per bp:1.725
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1220.5
Percentage of Background Sequences with motif2.25%
Average Position of motif in Targets66.8 +/- 41.3bp
Average Position of motif in Background97.8 +/- 73.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA4/MA0482.2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCTTCTCHDTH
TTCCTTATCTTT-
A C G T A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCTTCTCHDTH
TTCTTTCTCTT--
A C G T A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCTTCTCHDTH
NCCTTATCTG--
A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTTCTCHDTH
AACCTTATAT---
A C G T A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTTCTCHDTH
-YCTTATCTBN-
A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTTCTCHDTH
NNCTTATCTN--
A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCTTCTCHDTH
TTCTTATCTTT-
A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T A C G T

YY2/MA0748.2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTCTCHDTH
CGCCGCCATNN-----
A C G T A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T A C G T A C G T A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTCTCHDTH--
NTNTTCTTATCAGTNTN
A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCTTCTCHDTH-
GAGCCCTTGTCCCTAA
A C G T A C G T A C G T A T C G A G T C A G T C C G A T A C G T A G T C C G A T A G T C G C A T C T G A A G C T G T A C A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G