Information for 16-TATATTATAGCC (Motif 19)

A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A A C G T C G T A C G T A A C G T C G T A A C G T C G T A
p-value:1e-3
log p-value:-8.761e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4/MA1473.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATATTATAGCC
-GTTTTATTGCC
A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C
A C G T T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TATATTATAGCC
--TTTTATGGCM
A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C
A C G T A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C

PH0013.1_Cdx2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATATTATAGCC---
NAATTTTATTACCNNN
A C G T A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TATATTATAGCC----
ANANNTGATACCCNATN
A C G T A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TATATTATAGCC
-GTTTTATGGCC
A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C
A C G T T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TATATTATAGCC--
ANTAATTTTATGGCCGN
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TATATTATAGCC--
CCGTATTATAAACAA
A C G T A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

CDX2/MA0465.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TATATTATAGCC-
-NTTTTATTGCNN
A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C A C G T
A C G T C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

HOXD9/MA0913.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TATATTATAGCC
-NTTTTATTGC-
A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C
A C G T C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TATATTATAGCC--
NGANTTTTATGGCTCN
A C G T A C G T A C G T C G T A A C G T C G T A A C G T A C G T C G T A A C G T C G T A A C T G A G T C A G T C A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T