Information for 5-GAATAAAT (Motif 34)

A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C G T A A C G T A C G T A G T C
p-value:1e-1
log p-value:-2.881e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2309.8
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background97.9 +/- 122.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GAATAAAT-
AAGCAATAAAAA
A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GAATAAAT---
ACTATGAATGAATGAT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GAATAAAT
-AATAATT
A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GAATAAAT
HNRAATCAAT
A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GAATAAAT-
TACTGGAAAAAAAA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAATAAAT-----
NNCCATAAATCATNN
A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T

PBX2/MA1113.2/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAATAAAT----
GTCATAAATCATT
A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

ZNF24/MA1124.1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GAATAAAT-
GAATGAATGAATG
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

HOXA10/MA0899.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAATAAAT-
GGTAATAAAAA
A C G T A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GAATAAAT-
GTCATAAAAN
A C G T A C T G C G T A C G T A A C G T C G T A C G T A C G T A A C G T A C G T
T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T