Homer de novo Motif Results (motif_results/SRR15726024//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 833
Total background sequences = 56000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C G T A C G T A A C T G A G T C A G T C G T A C A G T C A T G C C T G A A C T G A C G T A C T G 1e-18-4.312e+010.96%0.00%61.3bp (24.0bp)PB0201.1_Zfp281_2/Jaspar(0.655)
More Information | Similar Motifs Found
motif file (matrix)
2 A G T C A C G T A G T C A G T C A C G T A G T C C T G A A C G T A C G T A G C T C T G A A C T G 1e-18-4.259e+011.32%0.01%46.7bp (47.7bp)PB0176.1_Sox5_2/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
3 A C G T A C G T C G T A A C G T C G T A C G T A A C T G A G T C C G T A A C T G A C T G A C T G 1e-13-3.096e+010.72%0.00%23.7bp (0.0bp)PB0174.1_Sox30_2/Jaspar(0.628)
More Information | Similar Motifs Found
motif file (matrix)
4 A C G T A C T G A C T G C G T A C G T A A C T G C G T A A C T G A C G T A G T C A G T C C G T A 1e-12-2.931e+010.84%0.01%27.3bp (35.4bp)PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer(0.749)
More Information | Similar Motifs Found
motif file (matrix)
5 A C T G C G T A A G C T A C T G C G T A A C G T A G T C C G T A A G T C C G T A C T G A C G T A 1e-12-2.931e+010.84%0.01%62.3bp (30.6bp)PH0017.1_Cux1_2/Jaspar(0.729)
More Information | Similar Motifs Found
motif file (matrix)
6 * C T A G C G T A A C G T C T G A A T G C G T A C A C G T T A G C C T A G C G T A A C T G A T C G 1e-11-2.731e+010.84%0.01%56.7bp (33.0bp)DMRT3/MA0610.1/Jaspar(0.583)
More Information | Similar Motifs Found
motif file (matrix)
7 * C G T A A G T C C G T A A C G T A C T G G T A C A G T C C G T A A C T G A C T G A C T G G T C A 1e-11-2.681e+010.72%0.01%42.0bp (27.1bp)TEAD1/MA0090.3/Jaspar(0.735)
More Information | Similar Motifs Found
motif file (matrix)
8 * A C G T C G T A C G T A C G T A A C T G C G T A A C G T C G T A A C T G A C G T A C T G A C T G 1e-10-2.510e+010.60%0.00%8.5bp (0.0bp)MEF2A/MA0052.4/Jaspar(0.635)
More Information | Similar Motifs Found
motif file (matrix)
9 * A C G T A T C G A C T G A C T G C G T A A C G T C T G A T G C A A G T C G C A T A T C G G T C A 1e-10-2.450e+010.84%0.01%45.0bp (32.4bp)Hand1::Tcf3/MA0092.1/Jaspar(0.592)
More Information | Similar Motifs Found
motif file (matrix)
10 * A C T G A C G T A G C T A T G C A G T C A G C T A C G T C G T A A C T G A G T C 1e-10-2.395e+011.32%0.07%40.8bp (52.3bp)Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer(0.654)
More Information | Similar Motifs Found
motif file (matrix)
11 * A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T 1e-10-2.335e+011.32%0.08%38.2bp (53.3bp)GFX(?)/Promoter/Homer(0.659)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C C G T A A C T G G C A T C T A G A G T C A C G T A T G C G T A C C G T A A G T C C G A T 1e-9-2.269e+010.72%0.01%55.3bp (87.1bp)PB0099.1_Zfp691_1/Jaspar(0.748)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G 1e-9-2.171e+010.84%0.02%33.5bp (68.4bp)PB0159.1_Rfx4_2/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
14 * A G T C A C G T A C T G A C G T A C T G A C T G A G T C A C T G A C G T A C T G 1e-9-2.165e+010.60%0.01%11.5bp (39.5bp)Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer(0.752)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A 1e-9-2.165e+010.60%0.01%44.0bp (52.1bp)PRDM1/MA0508.3/Jaspar(0.650)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C A C G T A G T C C G T A A C G T C G T A A G T C A G T C A G T C A G T C 1e-8-2.028e+010.72%0.01%24.0bp (44.9bp)Spz1/MA0111.1/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
17 * C G T A C T A G A T G C C G A T C G T A A T C G A G T C A G C T G A C T G A T C 1e-8-1.991e+014.57%1.48%53.4bp (54.2bp)Nr2e3/MA0164.1/Jaspar(0.671)
More Information | Similar Motifs Found
motif file (matrix)
18 * A C T G A C T G A C G T A G T C A C G T C G T A A C G T A C G T C G T A A G T C C G T A A C G T 1e-8-1.943e+010.48%0.00%24.1bp (0.0bp)NFIL3/MA0025.2/Jaspar(0.602)
More Information | Similar Motifs Found
motif file (matrix)
19 * A C T G A C G T C G T A T A G C G T C A C G T A A C T G A C G T C T A G C G T A A C G T C T A G 1e-8-1.943e+010.48%0.00%40.5bp (0.0bp)MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer(0.605)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G T C A C G T A C T G A C G T C G T A C G T A A C T G C G A T C T A G A C G T C T A G A C G T 1e-7-1.699e+010.84%0.04%48.6bp (77.1bp)Nkx3-2/MA0122.3/Jaspar(0.698)
More Information | Similar Motifs Found
motif file (matrix)
21 * A G T C C T G A A C T G A G T C G T A C A T C G A G T C C G T A A T C G G A T C 1e-7-1.683e+011.92%0.34%52.0bp (56.5bp)PB0151.1_Myf6_2/Jaspar(0.740)
More Information | Similar Motifs Found
motif file (matrix)
22 * A C T G A G T C A C G T C T A G C G T A A G T C A C G T A C T G A C G T A C T G A C G T A C T G 1e-5-1.305e+010.48%0.01%55.4bp (74.3bp)MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer(0.655)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C T G A C T G A G T C A C G T A C G T A C G T C G T A A C T G 1e-5-1.301e+011.80%0.40%66.2bp (57.5bp)ZBTB6/MA1581.1/Jaspar(0.678)
More Information | Similar Motifs Found
motif file (matrix)
24 * A T C G G C T A G T A C A G T C A G C T T C G A A G T C A G T C A G C T C G T A 1e-5-1.214e+010.96%0.11%63.0bp (54.0bp)RORA(var.2)/MA0072.1/Jaspar(0.650)
More Information | Similar Motifs Found
motif file (matrix)
25 * A G T C T G C A A G T C G A C T A C T G A G T C G T C A C G A T G T A C G T C A 1e-5-1.158e+012.52%0.82%58.6bp (58.5bp)PB0091.1_Zbtb3_1/Jaspar(0.806)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A C G T C G T A A C T G C G T A A C T G A C G T A C T G A G T C A G T C 1e-4-1.145e+010.60%0.03%52.0bp (54.8bp)Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer(0.671)
More Information | Similar Motifs Found
motif file (matrix)
27 * C T G A T G C A A C T G A C G T A C G T A C G T C G T A A C G T 1e-4-1.122e+016.01%3.13%56.5bp (56.4bp)SD0003.1_at_AC_acceptor/Jaspar(0.750)
More Information | Similar Motifs Found
motif file (matrix)
28 * A T G C A T G C G C A T A C G T A C G T A C T G C G T A A C G T 1e-4-1.010e+0122.60%17.20%55.7bp (57.7bp)PB0040.1_Lef1_1/Jaspar(0.824)
More Information | Similar Motifs Found
motif file (matrix)
29 * A T G C A T G C A G T C C G A T T A C G C A T G C T A G C G A T 1e-4-9.728e+005.17%2.71%60.0bp (57.6bp)EBF1/MA0154.4/Jaspar(0.791)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C T G C G T A C T A G A G T C C G T A A G T C C G T A A G T C A C G T A C T G C G T A A C G T 1e-3-7.447e+000.24%0.01%49.8bp (27.3bp)ZSCAN4/MA1155.1/Jaspar(0.589)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A A G T C C G T A A G T C C G T A A C T G C G T A A C T G A G T C A C G T A C T G A C T G 1e-3-7.447e+000.24%0.01%46.5bp (28.0bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.615)
More Information | Similar Motifs Found
motif file (matrix)
32 * A C G T A C T G A G T C A G T C C G T A A G T C A G T C A G T C C G T A C G T A A G T C C G T A 1e-2-6.647e+000.24%0.01%50.7bp (41.8bp)PB0029.1_Hic1_1/Jaspar(0.743)
More Information | Similar Motifs Found
motif file (matrix)
33 * A G T C A C G T A C T G A C T G A C T G C G T A A G T C C G T A A G T C C G T A 1e-2-5.120e+000.48%0.09%59.4bp (62.8bp)AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer(0.699)
More Information | Similar Motifs Found
motif file (matrix)
34 * C G T A A C T G A C G T A G T C C T G A A C G T A G T C A G T C 1e-2-4.815e+001.20%0.48%50.1bp (62.4bp)Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer(0.715)
More Information | Similar Motifs Found
motif file (matrix)
35 * A G T C C G T A A C G T A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C G T A C T G 1e-1-4.066e+000.12%0.00%59.2bp (0.0bp)Znf281/MA1630.1/Jaspar(0.672)
More Information | Similar Motifs Found
motif file (matrix)
36 * A C T G A C T G A C T G C G T A A C T G A C G T A C T G C G T A A G T C A G T C A G T C A C G T 1e-1-4.066e+000.12%0.00%61.2bp (0.0bp)PAX5/MA0014.3/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)