Information for 5-GGCCHAHCTGGG (Motif 6)

A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G
Reverse Opposite:
G T A C A G T C A G T C C G T A A C T G C G T A C G A T C G T A A C T G C A T G G T A C G T A C
p-value:1e-6
log p-value:-1.391e+01
Information Content per bp:1.726
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif23.53%
Number of Background Sequences with motif227.0
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets87.5 +/- 65.1bp
Average Position of motif in Background107.2 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGCCHAHCTGGG--
----WDNCTGGGCA
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCCHAHCTGGG--
-NNCCATCTGTNNN
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCCHAHCTGGG-
-VCCTCTCTGDDY
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T
A C G T T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

NEUROD1/MA1109.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGCCHAHCTGGG-
NNNCCATCTGTNN
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCHAHCTGGG-
GGGGCTYGKCTGGGA
A C G T A C G T A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

TWIST1/MA1123.2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGCCHAHCTGGG--
-NNACATCTGGNNN
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T A C G T
A C G T C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCCHAHCTGGG
--GCCATCTGTT
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCCHAHCTGGG--
----GGTCTGGCAT
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCCHAHCTGGG
-RYHYACCTGB-
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGCCHAHCTGGG---
RGMCCTACTRTGTGC
A C T G A C T G G T A C G T A C G A C T C G T A G A C T A G T C A C G T C T A G A C T G C A T G A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C