Information for 5-CCGCTGTG (Motif 31)

T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G
Reverse Opposite:
T A G C T C G A T G A C G C T A A C T G G T A C A T C G A T C G
p-value:1e-4
log p-value:-1.149e+01
Information Content per bp:1.650
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif6.92%
Number of Background Sequences with motif1994.3
Percentage of Background Sequences with motif4.18%
Average Position of motif in Targets108.0 +/- 53.4bp
Average Position of motif in Background97.4 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CCGCTGTG
--GCTGTG
T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCGCTGTG
CCYCCYGCTGDG
A C G T A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------CCGCTGTG
GACCCCCCGCTGTG
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCGCTGTG
CAGCTGTT
T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

MYF5/MA1641.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGTG-
NNACAGCTGTNN
A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G A C G T
T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CCGCTGTG-
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Zic2/MA1629.1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCGCTGTG--
CCCCCTGCTGTGNN
A C G T A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGCTGTG-
NNACAGCTGTNN
A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G A C G T
T C A G T G A C T C G A G T A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCGCTGTG---
NNTCCTGCTGTGNNN
A C G T A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0158.1_Rhox11_2/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCGCTGTG------
AGGACGCTGTAAAGGGA
A C G T A C G T A C G T T A G C A T G C C A T G T G A C C G A T A C T G A G C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A