Information for 18-TTAAAGCACTTC (Motif 17)

A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.099e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0116.1_Nkx2-9/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAGCACTTC---
NATTTAAGTACTTNAAA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTAAAGCACTTC---
NATTTAAGTACTTANNA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTAAAGCACTTC---
CTTTAAGTACTTAATG
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTAAAGCACTTC-
---AAGCACTTAA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Nkx3-2/MA0122.3/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTAAAGCACTTC--
-ATAACCACTTAAA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C G T C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTAAAGCACTTC-
---MRSCACTYAA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTAAAGCACTTC--
----ACCACTTGAA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

GFI1/MA0038.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTAAAGCACTTC-
-CAAATCACTGCA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T
A C G T A G T C T G C A G T C A C G T A A C G T G T A C C G T A T A G C C A G T C T A G G A T C G T C A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTAAAGCACTTC----
TTCNAAGTACTTNNNNN
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTAAAGCACTTC--
-----CCACTTGAA
A C G T A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A