Information for 4-GCAAAATATCTT (Motif 5)

A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.073e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCAAAATATCTT-
--AAGATATCCTT
A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0145.1_Mafb_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCAAAATATCTT
CAATTGCAAAAATAT--
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAAAATATCTT---
GACAGAGATATCAGTGT
A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GCAAAATATCTT
--AACATATGTT
A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T

BHLHE23/MA0817.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCAAAATATCTT-
-NAACATATGTTT
A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T
A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

OLIG3/MA0827.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCAAAATATCTT
--ANCATATGGT
A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCAAAATATCTT
--ACCATATGGT
A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
A C G T A C G T C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCAAAATATCTT
DCYAAAAATAGM--
A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCAAAATATCTT
ATGCTAAAAATAGAA-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCAAAATATCTT-
AACACCAAAACAAAGGA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A C G T A C G T A A C G T C G T A A C G T A G T C A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A