Information for 21-TAGGAGATTC (Motif 40)

A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A G T C A C G T A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-6.958e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background84.6 +/- 65.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TAGGAGATTC--
--GGAAATTCCC
A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TAGGAGATTC--
CTACTAGGATGTNNTN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGGAGATTC----
-AGGGGAATCCCCT
A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TAGGAGATTC--
--GGAAATTCCC
A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

MZF1/MA0056.2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGGAGATTC-
NNNTGGGGATTNN
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TAGGAGATTC-------
TTCTAGAANNTTCCAGAANN
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A G C A G C T T C G A C T A G G T C A C T G A A T C G T A G C G A C T C A G T A T G C A G T C C T G A A C T G T C G A T C G A A T C G T A C G

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGGAGATTC--
TTCTAGAABNTTCTA
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TAGGAGATTC
NACAGGAAAT--
A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGGAGATTC
TTCTAGAACGTTC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C

HSF1/MA0486.2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAGGAGATTC
TTCTAGAACGTTC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C