Information for 20-AGGCGCTCTACC (Motif 19)

C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C T G C G T A A C T G A G T C A C T G A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.099e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGCGCTCTACC
-GGCGCGCT---
C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGCGCTCTACC
ATAAAGGCGCGCGAT-
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGGCGCTCTACC---
---GGCTCYAKCAYC
C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGGCGCTCTACC-
-AGGTCTCTAACC
C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCGCTCTACC
AGCCACTCAAG-
C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGGCGCTCTACC
ATAAGGGCGCGCGAT-
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGGCGCTCTACC
TTTGGCGCCAAA--
A C G T A C G T C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGGCGCTCTACC
-NSCACTYVAV-
C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGGCGCTCTACC
--CGGCTGTTCC
C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
A C G T A C G T G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGCGCTCTACC
AASCACTCAA--
C G T A A C T G A C T G A G T C A C T G A G T C A C G T A G T C A C G T C G T A A G T C A G T C
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T