| p-value: | 1e-5 |
| log p-value: | -1.254e+01 |
| Information Content per bp: | 1.963 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 1.92% |
| Number of Background Sequences with motif | 39.8 |
| Percentage of Background Sequences with motif | 0.09% |
| Average Position of motif in Targets | 88.0 +/- 52.2bp |
| Average Position of motif in Background | 100.5 +/- 60.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.6 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GACATAAAGT GTCATAAAAN |
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CDX1/MA0878.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACATAAAGT GGCCATAAAAC |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACATAAAGT- NGYCATAAAWCH |
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CDX4/MA1473.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACATAAAGT GGCAATAAAAC |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GACATAAAGT KGCCATAAAA- |
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|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GACATAAAGT VGCCATAAAA- |
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|
|
PH0013.1_Cdx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GACATAAAGT-- AAAGGTAATAAAATTT |
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|
|
PH0056.1_Hoxa9/Jaspar
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GACATAAAGT---- ACGGCCATAAAATTAAT |
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|
HOXD9/MA0913.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GACATAAAGT GCAATAAAAC |
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PH0065.1_Hoxc10/Jaspar
| Match Rank: | 10 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GACATAAAGT-- TAAAGTCGTAAAACGT |
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