Information for 15-GGATTTGGAGTG (Motif 15)

A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C G T A G T C A G T C
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets149.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGATTTGGAGTG
GGGAATTGTAGT-
A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGATTTGGAGTG--
---NNTTGAGTGNN
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGATTTGGAGTG--
----BTBRAGTGSN
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGATTTGGAGTG----
--NNNTTGAGTGGNNN
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGATTTGGAGTG--
----CTYRAGTGSY
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GGATTTGGAGTG---
-----TTGAGTGSTT
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGATTTGGAGTG-----
-AATTTCAAGTGGCTTN
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGATTTGGAGTG-
----NTCAAGTGG
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:9
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------GGATTTGGAGTG
GCMTBCTGGGAGTTGTAGTY
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGATTTGGAGTG---
-----TTRAGTGSYK
A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T