Information for 10-GTTGTTCAGC (Motif 28)

A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.469e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets119.0 +/- 0.0bp
Average Position of motif in Background108.7 +/- 71.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX12/MA1561.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTTGTTCAGC
NATTGTTCGGT
A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

SOX14/MA1562.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTGTTCAGC
CATTGTTCGG-
A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GTTGTTCAGC--
AATCAATTGTTCCGCTA
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

ZNF341/MA1655.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTTCAGC
NNGGCTGTTCCN-
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGTTCAGC--
CNNNTATTGTTCNNNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

SOX8/MA0868.2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTTCAGC
CCATTGTTCT--
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTTGTTCAGC
-TTGTTTAC-
A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GTTGTTCAGC-
ANNTCTATTGTTCNNNA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTTGTTCAGC
CCATTGTTNY--
A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTTGTTCAGC
NCCATTGTTC---
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T A G T C C G T A A C T G A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T