Information for 23-AGTGAGCCTGCT (Motif 25)

C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C C G T A A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.899e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AGTGAGCCTGCT---
----NNCCTGCTGNG
C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGTGAGCCTGCT---
GGNGCGNCTGTTNNN
C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAGCCTGCT--
NNNNTGACCCGGCGCG
A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAGCCTGCT--
NNCNTGACCCCGCTCT
A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

Zic2/MA1629.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AGTGAGCCTGCT-----
---CCCCCTGCTGTGNN
C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AGTGAGCCTGCT----
------CCTGCTGAGH
C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGTGAGCCTGCT
-ATAATCCC---
C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

GRHL2/MA1105.2/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGTGAGCCTGCT--
--NAAACCTGTTTN
C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T G T C A T C G A C T G A C T G A A T G C G A T C C G A T A T C G G A C T G A C T A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:AGTGAGCCTGCT---
---CCCCCTGCTGTG
C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:-9
Orientation:forward strand
Alignment:---------AGTGAGCCTGCT
GAGCCTGGTACTGWGCCTGR-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C A C G T A C T G A G T C A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T