| p-value: | 1e-5 |
| log p-value: | -1.227e+01 |
| Information Content per bp: | 1.799 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 50.00% |
| Number of Background Sequences with motif | 394.1 |
| Percentage of Background Sequences with motif | 0.09% |
| Average Position of motif in Targets | 154.7 +/- 18.6bp |
| Average Position of motif in Background | 107.0 +/- 181.3bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.50 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SOX9/MA0077.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | SCYYATTGWKCW --CCATTGTTC- |
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SOX8/MA0868.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | SCYYATTGWKCW --CCATTGTTCT |
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PB0183.1_Sry_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -SCYYATTGWKCW---- CNNNTATTGTTCNNNNN |
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|
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 4 |
| Score: | 0.75 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | SCYYATTGWKCW -NCCATTGTTC- |
|
|
|
PB0173.1_Sox21_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.75 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -SCYYATTGWKCW---- AATCAATTGTTCCGCTA |
|
|
|
PB0132.1_Hbp1_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.75 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---SCYYATTGWKCW-- TGTTCCCATTGTGTACT |
|
|
|
PB0065.1_Sox15_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.73 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --SCYYATTGWKCW--- ANNTCTATTGTTCNNNA |
|
|
|
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
| Match Rank: | 8 |
| Score: | 0.72 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | SCYYATTGWKCW --CCATTGTTYB |
|
|
|
SOX13/MA1120.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | SCYYATTGWKCW NNCCATTGTNN- |
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|
|
Sox17/MA0078.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | SCYYATTGWKCW -CTCATTGTC-- |
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