Information for 3-GATCTCTDKBAG (Motif 3)

C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G
Reverse Opposite:
A G T C A C G T T G A C G T C A G C T A C G T A C T A G C T G A C T A G C G T A C G A T A G T C
p-value:1e-7
log p-value:-1.639e+01
Information Content per bp:1.657
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif507.0
Percentage of Background Sequences with motif0.77%
Average Position of motif in Targets82.4 +/- 56.5bp
Average Position of motif in Background94.9 +/- 68.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GATCTCTDKBAG
ATGAACTTT-----
A C G T A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G
C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GATCTCTDKBAG---
TTTTTTTTTTTTTTCAGGTT
A C G T A C G T A C G T A C G T A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GATCTCTDKBAG---
CAATCACTGGCAGAAT
A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GATCTCTDKBAG----
-CTCCCTGGGAGGCCN
C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GATCTCTDKBAG--
TGAACCCGATGACCC
A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G A C G T A C G T
A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GATCTCTDKBAG---
TTTTTTTTTTTTTTCAGGTT
A C G T A C G T A C G T A C G T A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GATCTCTDKBAG
AGGTCTCTAACC-
A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GATCTCTDKBAG
NNAATTCTCGNTNAN
A C G T A C G T A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GATCTCTDKBAG
NNNGTGACCTTTGNNN-
A C G T A C G T A C G T A C G T A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T

PB0126.1_Gata5_2/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----GATCTCTDKBAG
NNNCTGATATCTCNNNN
A C G T A C G T A C G T A C G T A C G T C T A G G C T A C G A T A G T C A G C T A G T C C G A T C A G T A C G T A C T G C G T A C T A G
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C