Information for 22-GTATAGACTG (Motif 34)

A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A G T C A C G T C G T A A C G T C G T A A G T C
p-value:1e-2
log p-value:-6.873e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif108.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background100.8 +/- 173.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTATAGACTG
CGTCTAGACA-
A C G T A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

ZSCAN29/MA1602.1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTATAGACTG
NCNGTGTAGACG-
A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GTATAGACTG
TGTCTAGACA-
A C G T A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTATAGACTG
-TATTGAYY-
A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C A C G T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTATAGACTG
TGTCTAGA---
A C G T A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G
G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GTATAGACTG-
---TWGTCTGV
A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTATAGACTG---
VAGRACAKNCTGTBC
A C G T A C G T A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTATAGACTG-----
GTATAAAAGGCGGGG
A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTATAGACTG-----
GTATAAAAGGCGGGG
A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL002.1_INR/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTATAGACTG-
---NNNANTGA
A C T G A C G T C G T A A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T
A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A