Information for 23-GCAATATAGG (Motif 37)

A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C G T A C T G A G T C
p-value:1e-2
log p-value:-6.849e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif75.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background141.4 +/- 90.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCAATATAGG
AAGCAATAAAAA
A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCAATATAGG
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCAATATAGG
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

CDX4/MA1473.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCAATATAGG
GGCAATAAAAC
A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
C A T G T C A G A G T C T G C A C G T A A C G T C G T A C G T A G T C A G T C A A G T C

HOXD9/MA0913.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAATATAGG
GCAATAAAAC
A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
T C A G A G T C G T C A T C G A C G A T G C T A C G T A C G T A G T C A G A T C

ZNF143/MA0088.2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCAATATAGG--
CAATGCATTGTGGGTA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

CDX1/MA0878.2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAATATAGG
GGCCATAAAAC
A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCAATATAGG
RGCAATNAAA-
A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G
C T A G T A C G G A T C G T C A T G C A A C G T T G C A G C T A T C G A T G C A A C G T

SRF/MA0083.3/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCAATATAGG----
TGACCATATATGGTCA
A C G T A C G T A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

RORC/MA1151.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCAATATAGG---
-ATAAGTAGGTCA
A C T G A G T C C G T A C G T A A C G T C G T A A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A