Information for 2-TTTTGAGTCG (Motif 9)

A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C A C G T A G T C C G T A C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.387e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background102.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTTGAGTCG---
NNNTTGAGTGGNNN
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTTGAGTCG-
NNTTGAGTGNN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

BATF3/MA0835.2/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTTGAGTCG--
-NATGAGTCATN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T
A C G T C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A

BATF::JUN/MA0462.2/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTGAGTCG--
-NATGAGTCATN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T
A C G T C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A

BATF/MA1634.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTGAGTCG--
-NATGAGTCATN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T
A C G T C G A T G T C A G C A T C A T G G C T A A T C G G C A T G T A C C G T A A C G T G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTTGAGTCG--
-CTTGAGTGGCT
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Smad2::Smad3/MA1622.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTGAGTCG----
NNATGAGTCATNNN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A C G T C G A T T C G A C G A T C A T G G C T A T A C G G C A T G T A C C G T A A G C T G T A C C T G A G A C T

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTTGAGTCG
ATTTGAATT-
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

FOSL1::JUN/MA1128.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTGAGTCG---
NNATGAGTCATNN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
A C T G C A T G T C G A A G C T C A T G G T C A T C A G C G A T G T A C C T G A A G C T G T A C T G C A

FOSL1/MA0477.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTGAGTCG---
NNATGAGTCATNN
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A G T C A C T G A C G T A C G T A C G T
C T A G C T A G T C G A G A C T C A T G G C T A T A C G C G A T G T A C C T G A A G C T G A T C G C T A