Information for 17-GCCTGTGGTCTA (Motif 24)

A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
Reverse Opposite:
A C G T C G T A A T C G C G T A A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C
p-value:1e-4
log p-value:-1.046e+01
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets120.1 +/- 51.6bp
Average Position of motif in Background112.5 +/- 64.2bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCCTGTGGTCTA
GTCTGTGGTTT-
A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCCTGTGGTCTA
-GCTGTGGTTT-
A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCCTGTGGTCTA
NNHTGTGGTTWN
A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCCTGTGGTCTA
--CTGTGGTTTN
A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GCCTGTGGTCTA
-NNTGTGGTTT-
A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCTGTGGTCTA
TCACCTCTGGGCAG
A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCTGTGGTCTA
-GCTGTG-----
A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GCCTGTGGTCTA--
AATCCCTTTGATCTATC
A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

TCF7L1/MA1421.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCTGTGGTCTA-
-CCTTTGATCTTT
A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A A C G T
A C G T A G T C T A G C A G C T A C G T A C G T A C T G T G C A G C A T T A G C C G A T A G C T C G A T

TFAP2A/MA0003.4/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGTGGTCTA
NNGCCTGAGGCANN
A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C G T A C T G C T A G A C G T A T G C A C G T C G T A
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T