Information for 5-ACAGGGTTCG (Motif 11)

C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A G T C A G T C A G T C A C G T A C T G A C G T
p-value:1e-3
log p-value:-8.468e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2/MA1105.2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACAGGGTTCG
AAAACAGGTTTT-
A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGGTTCG
CACAGN-----
A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACAGGGTTCG-
-CATTGTTCGG
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G A C G T
A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

CTCFL/MA1102.2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACAGGGTTCG-
AGCAGGGGGCGC
A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G A C G T
T C G A T A C G A T G C T G C A A T C G T C A G A T C G A T C G C A T G G A T C T C A G A T G C

SOX12/MA1561.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACAGGGTTCG--
-NATTGTTCGGT
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T
A C G T A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACAGGGTTCG------
-NTGGTTTCGGTTNNN
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ACAGGGTTCG-
-TWVGGTCCGC
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G A C G T
A C G T A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C

VDR/MA0693.2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACAGGGTTCG
--TGAGTTCA
C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G
A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A

SIX1/MA1118.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACAGGGTTCG
TATCAGGTTAC-
A C G T A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ACAGGGTTCG
GGGTCAACGAGTTCA
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G A C T G A C T G A C G T A C G T A G T C A C T G
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A