| p-value: | 1e-3 |
| log p-value: | -8.385e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 2.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 153.0 +/- 0.0bp |
| Average Position of motif in Background | 156.9 +/- 16.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCAGGTCACATA TRAGGTCA---- |
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|
NR4A2/MA0160.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCAGGTCACATA -AAGGTCAC--- |
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|
|
SIX1/MA1118.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCAGGTCACATA TATCAGGTTAC--- |
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|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TCAGGTCACATA --AGGTCA---- |
|
|
|
SIX2/MA1119.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TCAGGTCACATA- GTATCAGGTTTCAGNN |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCAGGTCACATA -GAGGTCAT--- |
|
|
|
NR2F2/MA1111.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCAGGTCACATA CAAAGGTCAAA-- |
|
|
|
THRB(var.3)/MA1576.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCAGGTCACATA------- TAAGGTCACGTNAGGTCAC |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCAGGTCACATA CGAGGTCAC--- |
|
|
|
USF2/MA0526.3/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TCAGGTCACATA---- --NNGTCACATGACNN |
|
|
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