Information for 5-AGAGGCGTCC (Motif 25)

C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C A C T G A G T C A G T C A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.946e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background92.4 +/- 113.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGCGTCC----
NTNNNAGGAGTCTCNTN
A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0094.1_Zfp128_1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCGTCC-----
TCTTTGGCGTACCCTAA
A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGAGGCGTCC----
CAAAGGCGTGGCCAG
A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AGAGGCGTCC-
---GGCGCGCT
C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCGTCC----
GCGGAGGTGTCGCCTC
A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGCGTCC----
NNNGGGGCGCCCCCNN
A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGAGGCGTCC
HAWGRGGCCM--
A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T

TBX3/MA1566.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAGGCGTCC-
-GAGGTGTGAA
C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T
A C G T C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAGGCGTCC--
TAAGGCGTCTTG
C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

NHLH2/MA1529.1/Jaspar

Match Rank:10
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AGAGGCGTCC-
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C T G A G T C A C T G A C G T A G T C A G T C A C G T
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C