Information for 15-CGTGATCATG (Motif 20)

A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
Reverse Opposite:
G T A C C T G A A C G T A T C G C G T A A C G T A G T C C G T A A G T C C T A G
p-value:1e-5
log p-value:-1.332e+01
Information Content per bp:1.811
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif81.4
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets126.5 +/- 52.7bp
Average Position of motif in Background107.9 +/- 52.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CGTGATCATG
NHGTCGTGAYDN--
A C G T A C G T A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C A C G T A C G T

TFE3/MA0831.2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGTGATCATG
CACGTGAC----
A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
A G T C C G T A A G T C T C A G A C G T A C T G T G C A A G T C A C G T A C G T A C G T A C G T

MLX/MA0663.1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CGTGATCATG
ATCACGTGAT----
A C G T A C G T A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
C T G A A C G T A G T C C T G A A G T C C A T G C G A T C A T G C T G A G A C T A C G T A C G T A C G T A C G T

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGTGATCATG
GTCACGTGAT----
A C G T A C G T A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
T C A G G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G C T A C G T A C G T A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTGATCATG---
NNCTNAATTATGANN
A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G A C G T A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

Arntl/MA0603.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTGATCATG
NCACGTGACN---
A C G T A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGATCATG
ATCACGTGAT----
A C G T A C G T A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T A C G T A C G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTGATCATG----
TAGTGATCATCATTA
A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G A C G T A C G T A C G T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTGATCATG
GGACGTGC-----
A C G T A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTGATCATG
RTACGTGC-----
A C G T A C G T A C G T A G T C A C T G C G A T C T A G G T C A C G A T A T G C G T C A A G C T A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T