Information for 10-GTTTTCATTCGC (Motif 14)

A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G C G T A C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C
p-value:1e-3
log p-value:-8.799e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTTTCATTCGC
--TTTCATTRCC
A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GTTTTCATTCGC
--TTTCATKGCC
A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTTTCATTCGC
--TTTTATTRGN
A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTTTTCATTCGC-
NNTGTTTATTTTGGCA
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTCATTCGC
TGGTTTCAGT---
A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTCATTCGC
CAGTTTCGNTTCTN
A C G T A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

Foxl2/MA1607.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTCATTCGC
NNTGTTTACATANN-
A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTCATTCGC--
NNAATTTTATTGGNTN
A C G T A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTTTCATTCGC
ATTTTCCATT---
A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTCATTCGC
NATTTGCATNN--
A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C T G A G T C
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T A C G T