Information for 2-CMTTGTCTTSMC (Motif 2)

G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
Reverse Opposite:
C A T G A C G T A T G C C G T A G T C A C T A G C G T A A G T C C G T A C G T A A C T G C T A G
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.677
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.5 +/- 41.5bp
Average Position of motif in Background169.7 +/- 12.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CMTTGTCTTSMC
CCATTGTTTT---
A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

GATA4/MA0482.2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CMTTGTCTTSMC
TTCCTTATCTTT--
A C G T A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CMTTGTCTTSMC
CTCATTGTC-----
A C G T A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CMTTGTCTTSMC
NCCATTGTTY----
A C G T A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CMTTGTCTTSMC
TTCTTATCTTT--
A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CMTTGTCTTSMC
CCATTGTTYYBB-
A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CMTTGTCTTSMC
NNCCATTGTNN----
A C G T A C G T A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T A C G T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CMTTGTCTTSMC
CTATTGTTTT---
A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CMTTGTCTTSMC
YCTTATCTBN--
G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CMTTGTCTTSMC
CCATTGTTYB---
A C G T G A T C G T A C A C G T C G A T T A C G C G A T A G T C A C G T C G A T A T C G G T C A G A T C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T