Information for 18-GGCAAATACC (Motif 33)

A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C G T A C G T A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-6.941e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background97.5 +/- 104.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGCAAATACC
WAAGTAAAYA--
A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCAAATACC--
GGGAAATCCCCN
A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCAAATACC-
-GGAAATTCCC
A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCAAATACC
AAGGCAAGTGT-
A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGCAAATACC-
-GGAAATTCCC
A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCAAATACC-
-GGAAANCCCC
A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

HOXB7/MA1501.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCAAATACC
GGTAATTAAC
A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C
T C A G A C T G A G C T G T C A G T C A A C G T G C A T C T G A T C G A T A G C

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCAAATACC-
-GGAAATCCCC
A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCAAATACC
ATATGCAAAT---
A C G T A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCAAATACC----
AAGGTAATTACCTAAT
A C G T A C G T A C T G A C T G A G T C C G T A C G T A C G T A A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T