Information for 13-TTTCATACGG (Motif 26)

A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C G T C G T A A C G T A C T G C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.723e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif4.76%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background75.0 +/- 45.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATACGG--
NNATNTGATANNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTCATACGG
TTTAAT----
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTCATACGG
NNNTTTNTAATACNG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATACGG
NTTTTATDRG-
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:5
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TTTCATACGG
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:6
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TTTCATACGG
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTTCATACGG
TTTTATKRGG
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PB0044.1_Mtf1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATACGG---
NNTTTGCACACGGCCC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTCATACGG
TTTTATTRGN
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

MTF1/MA0863.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTCATACGG---
TTTGCACACGGCAC
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A G T C A C T G A C T G A C G T A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C