Information for 1-GCTTGATCGT (Motif 6)

A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G C G T A A C G T A G T C C G T A C G T A A C T G A G T C
p-value:1e-3
log p-value:-9.067e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0144.1_Lef1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTGATCGT-
NNANTGATTGATNTTN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCTTGATCGT-
NNANTGATTGATNNNN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTTGATCGT
--TTGATTGN
A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCTTGATCGT
TTTGATTGATGN-
A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

NR6A1/MA1541.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTTGATCGT---
NTGACCTTGAACTTGAN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

PH0016.1_Cux1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCTTGATCGT----
ACCGGTTGATCACCTGA
A C G T A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

ZBTB6/MA1581.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTTGATCGT-
GTCCTTGAGCCCG
A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCTTGATCGT
TGATKGATGR-
A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G A C G T

PAX5/MA0014.3/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCTTGATCGT
GAGCGTGACCCC
A C G T A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTTGATCGT-
-ATTGATTYND
A C T G A G T C A C G T A C G T A C T G C G T A A C G T A G T C A C T G A C G T A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T