Information for 3-TTAACACGCC (Motif 18)

A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G C T A G A G T C C T A G C G A T C T A G A C G T A C G T C G T A C G T A
p-value:1e-5
log p-value:-1.290e+01
Information Content per bp:1.849
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif257.7
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets82.8 +/- 30.3bp
Average Position of motif in Background100.4 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LBX1/MA0618.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTAACACGCC
TTAATTAG--
A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTAACACGCC
NTAATTAATAT---
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C
A C G T A C G T C G T A C G T A C G A T A C G T C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TTAACACGCC--
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTAACACGCC
TTTAAT-----
A C G T A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTAACACGCC---
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTAACACGCC
ATTAACACCT-
A C G T A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTAACACGCC-----
TTAACCCTTTVNKKN
A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

PH0069.1_Hoxc4/Jaspar

Match Rank:8
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------TTAACACGCC
NNTNNTTAATTAATNCG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTAACACGCC---
-CAAGACGCCTTA
A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTAACACGCC
TTTAATTGCN-
A C G T A C G T A C G T G T C A C G T A A G T C C G T A A G T C A C T G A G T C A G T C
C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T