Information for 4-CCATTCTTCT (Motif 10)

A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
Reverse Opposite:
C G T A A T C G C G T A C G T A A T C G G T C A C T G A A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.834
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif210.6
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets91.5 +/- 62.6bp
Average Position of motif in Background102.7 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CCATTCTTCT
NCCATTGTTC-
A C G T A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

SOX8/MA0868.2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCATTCTTCT
CCATTGTTCT
A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCATTCTTCT
CCATTGTTYB
A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCATTCTTCT
NCCATTGTTY-
A C G T A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCATTCTTCT---
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T A C G T A C G T A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX9/MA0077.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCATTCTTCT
CCATTGTTC-
A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCATTCTTCT--
CCATTGTTYYBB
A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T A C G T A C G T
A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

Sox6/MA0515.1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCATTCTTCT
CCATTGTTTT
A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CCATTCTTCT--
ANNTCCATTGTTCNNN
A C G T A C G T A C G T A C G T A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

SOX13/MA1120.1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCATTCTTCT
NNCCATTGTNN-
A C G T A C G T A G T C A G T C G T C A A G C T A C G T A T G C C G A T A C G T A T G C C G A T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T