Information for 6-ADCCCAGTABCA (Motif 6)

C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A
Reverse Opposite:
A C G T A C T G T C G A A C G T C G T A G A T C A C G T A C T G A T C G A T C G G A T C A C G T
p-value:1e-4
log p-value:-9.864e+00
Information Content per bp:1.738
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif570.4
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets123.0 +/- 25.0bp
Average Position of motif in Background105.2 +/- 88.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0105.1_Arid3a_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ADCCCAGTABCA-----
--ACCCGTATCAAATTT
C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ADCCCAGTABCA---
ATTTACAGTAGCAAAA
A C G T C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

OSR1/MA1542.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ADCCCAGTABCA
--NACAGTAGCN
C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A
A C G T A C G T G T C A T C G A G A T C T C G A A C T G C G A T C T G A C T A G A G T C C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ADCCCAGTABCA---
ATGTACAGTAGCAAAG
A C G T C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ADCCCAGTABCA--
---AATGTATCAAT
C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ADCCCAGTABCA---
ADGGYAGYAGCATCT
C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ADCCCAGTABCA---
NNTGTAGGTAGCANNT
A C G T C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Isl1/MA1608.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ADCCCAGTABCA
-ATCCATTAGCA
C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A
A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

NR1D2/MA1532.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ADCCCAGTABCA-
NTGACCCACTAACCC
A C G T A C G T C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ADCCCAGTABCA
AAGGCAAGTGT--
A C G T C G T A C A T G A T G C A T G C G T A C G T C A C T A G A C G T C G T A A C G T A G T C G T C A
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T