Information for 6-GCAGCGTGTC (Motif 13)

T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C
Reverse Opposite:
A C T G T G C A T A G C C G T A A G T C T C A G A T G C A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.902e+01
Information Content per bp:1.722
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets133.8 +/- 26.9bp
Average Position of motif in Background88.4 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGTGTC--
NNGTCGCGTGNCAC
A C G T A C G T T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C A C G T A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

PAX5/MA0014.3/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCAGCGTGTC---
-GAGCGTGACCCC
T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C A C G T A C G T A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGCGTGTC-----
CGCGCCGGGTCACGTA
A C G T T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C A C G T A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCAGCGTGTC
TCAGNGAGCGTGAC
A C G T A C G T A C G T A C G T T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

RFX7/MA1554.1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCGTGTC
NTAGCAACG----
A C G T A C G T A C G T T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCAGCGTGTC
-CAGCC----
T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGTGTC
DCTCAGCAGG--
A C G T A C G T T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCAGCGTGTC
--TGCGTG--
T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C
A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T

HES1/MA1099.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCAGCGTGTC
GGCACGTGGC
T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C
A C T G C A T G G T A C C T G A A G T C C T A G G A C T C A T G A T C G A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCAGCGTGTC--
TGGCACCATGCCAA
A C G T A C G T T C A G T A G C C G T A T A C G A G T C C T A G G C A T A T C G A C G T T G A C A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A