Information for 1-AAMCCTAWRA (Motif 1)

T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A
Reverse Opposite:
A C G T G A C T C G A T C G A T C G T A A C T G A C T G C A G T A C G T A G C T
p-value:1e-11
log p-value:-2.692e+01
Information Content per bp:1.783
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif550.1
Percentage of Background Sequences with motif1.14%
Average Position of motif in Targets99.0 +/- 53.5bp
Average Position of motif in Background99.1 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AAMCCTAWRA-
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

RUNX3/MA0684.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAMCCTAWRA-
AAAACCTCAAAT
A C G T T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AAMCCTAWRA---
---CCTTTGAWGT
T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

SIX1/MA1118.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AAMCCTAWRA
GTAACCTGATA
A C G T T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A
C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAMCCTAWRA------
AATCCCTTTGATCTATC
A C G T T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

TCF7/MA0769.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AAMCCTAWRA---
--TCCTTTGATGT
T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AAMCCTAWRA---
---CCTTTGATGT
T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAMCCTAWRA---
---CCTTTGATST
T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAMCCTAWRA------
ATTTCCTTTGATCTATA
A C G T T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

LEF1/MA0768.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAMCCTAWRA-----
AACCCTTTGATCTTT
T C G A C G T A G T C A A G T C A G T C A C G T C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T