Information for 1-CAACGCGA (Motif 35)

A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C A C T G A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.284e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background90.2 +/- 90.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX18/MA1563.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAACGCGA
CACAATGC--
A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CAACGCGA
NTAGCAACG---
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAACGCGA---
GTGCCACGCGACTG
A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A A C G T A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAACGCGA
-CACGCA-
A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAACGCGA-----
TTGACCGAGAATTCC
A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CAACGCGA---
NAGNTCTCGCGAGAN
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A A C G T A C G T A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

HES1/MA1099.2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAACGCGA-
GNCACGTGCC
A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A A C G T
T A C G T A G C G T A C C T G A A G T C C T A G G A C T C A T G G T A C T G A C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAACGCGA
NCCACGTG-
A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

TFEC/MA0871.2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAACGCGA--
CCCACGTGACC
A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A A C G T A C G T
G T A C T A G C A T G C C G T A A G T C C T A G A C G T A T C G T G C A A G T C T G A C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAACGCGA-
KCCACGTGAC
A C G T A G T C C G T A C G T A A G T C A C T G A G T C A C T G C G T A A C G T
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C