Information for 10-GCATTAGTTC (Motif 33)

A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A G T C A C G T C G T A C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.385e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background99.0 +/- 68.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1/MA1608.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCATTAGTTC
ATCCATTAGCA-
A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCATTAGTTC
NNGGATTAGN--
A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCATTAGTTC
GNGGATTAGN--
A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCATTAGTTC----
TTATTAGTACATAN
A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A

OTX2/MA0712.2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCATTAGTTC
AAGGGATTAGAA-
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

PITX1/MA0682.2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAGTTC
NGGATTAN---
A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PH0129.1_Otx1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCATTAGTTC--
AGAGGGGATTAATTTAT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

NR1I3/MA1534.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCATTAGTTC--
---AAAGTTCAT
A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCATTAGTTC
RGGATTAR---
A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T

PITX2/MA1547.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCATTAGTTC
GGGATTAN---
A C G T A C T G A G T C C G T A A C G T A C G T C G T A A C T G A C G T A C G T A G T C
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T