Information for 5-CATTTATCGA (Motif 21)

A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A C G T C G T A C G T A C G T A A C G T A C T G
p-value:1e-3
log p-value:-8.769e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets196.0 +/- 0.0bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CATTTATCGA
ANCGTTTANN--
A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:2
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CATTTATCGA---
---TTATCGATTA
A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CATTTATCGA--
--NTNATCGATA
A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T
A C G T A C G T G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A

CUX1/MA0754.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CATTTATCGA---
---TAATCGATAA
A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATTTATCGA
TCATCAATCA-
A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T

ONECUT2/MA0756.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CATTTATCGA------
--ATTATCGATTTTTT
A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

BARHL1/MA0877.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CATTTATCGA
NCGTTTAN---
A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CATTTATCGA---
---NTATYGATCH
A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CATTTATCGA
NNNNNNCTTTTATAN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CATTTATCGA
NNNNNNCTTTTATAN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T