| p-value: | 1e-4 |
| log p-value: | -1.099e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 25.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 6.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GATATGTCCTTA AAGATATCCTT- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GATATGTCCTTA ----TGACCTYA |
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NR2F2/MA1111.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GATATGTCCTTA- --NNTGACCTTTN |
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NEUROG2/MA0669.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GATATGTCCTTA AACATATGTC---- |
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|
|
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GATATGTCCTTA --BNTGDCCTTG |
|
|
|
PB0163.1_Six6_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----GATATGTCCTTA- ATGGGATATATCCGCCT |
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|
|
Esrrg/MA0643.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GATATGTCCTTA- ---ATGACCTTGA |
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|
|
NEUROG1/MA0623.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GATATGTCCTTA GACATATGTC---- |
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|
|
ESRRB/MA0141.3/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GATATGTCCTTA- --NATGACCTTGA |
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|
|
PB0126.1_Gata5_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GATATGTCCTTA NNNCTGATATCTCNNNN |
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