Information for 25-GGACCATTGG (Motif 42)

A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T A C T G A C T G A C G T A G T C A G T C
p-value:1e-3
log p-value:-6.911e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background125.2 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGACCATTGG----
--CTCATTGGCCAG
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GGACCATTGG--
--CCGATTGGCT
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGACCATTGG----
NTGACCTTTGGACCC
A C G T A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
C A T G G A C T T C A G T G C A G T A C G T A C A G C T G C A T A G C T C T A G C T A G G T C A G T A C A G T C A G T C

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGACCATTGG--
-ATCCATTAGCA
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

SOX2/MA0143.4/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGACCATTGG--
-NNCCATTGTNN
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

SOX13/MA1120.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGACCATTGG--
-NNCCATTGTNN
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGACCATTGG---
---CCATTGTTYB
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGACCATTGG-----
---TGATTGGCTANN
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGACCATTGG--
---CCATTGTTC
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGACCATTGG-
---CCWTTGTY
A C T G A C T G C G T A A G T C A G T C C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T