Information for 15-TTGTATGTCA (Motif 31)

A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A G T C C G T A A C G T C G T A A G T C C G T A C G T A
p-value:1e-3
log p-value:-7.489e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif33.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets158.0 +/- 0.0bp
Average Position of motif in Background84.1 +/- 92.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TTGTATGTCA-
----NTGTCAN
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTGTATGTCA--
CCATTGTATGCAAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTGTATGTCA---
-----TGTCANYT
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTGTATGTCA---
-TGTCTGDCACCT
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTGTATGTCA-
---CCTGTCAA
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTGTATGTCA-
---RHTGWCAR
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGTATGTCA---
CTGTCTGTCACCT
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTGTATGTCA-
---TACGTCAT
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

CDX1/MA0878.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGTATGTCA
GTTTTATGGCC
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGTATGTCA
ATCAAGGTCA
A C G T A C G T A C T G A C G T C G T A A C G T A C T G A C G T A G T C C G T A
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A