Information for 1-KTYRSCMTCWAC (Motif 1)

A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T C G A T A C T G C G T A A C G T A C T G A T G C A G C T C T G A C G T A G T C A
p-value:1e-7
log p-value:-1.812e+01
Information Content per bp:1.817
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif50.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets133.3 +/- 71.7bp
Average Position of motif in Background92.1 +/- 75.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.57
Offset:6
Orientation:forward strand
Alignment:KTYRSCMTCWAC
------ATCCAC
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

ZSCAN29/MA1602.1/Jaspar

Match Rank:2
Score:0.52
Offset:5
Orientation:forward strand
Alignment:KTYRSCMTCWAC-----
-----CGTCTACACGGG
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:KTYRSCMTCWAC-
-AAAACCTCAAAT
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C A C G T
A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:KTYRSCMTCWAC
TTCCCCCTAC--
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:KTYRSCMTCWAC
--GGCCATTAAC
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C
A C G T A C G T C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---KTYRSCMTCWAC
BTVATTWGCATA---
A C G T A C G T A C G T A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:forward strand
Alignment:KTYRSCMTCWAC----
------ACCAACTGTC
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:KTYRSCMTCWAC-
--TCCAATCCACA
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C A C G T
A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:KTYRSCMTCWAC-----
TCACCCATCAATAAACA
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

ZNF282/MA1154.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:KTYRSCMTCWAC-----
CTTTCCCACAACACGAC
A C G T A C G T A G C T C T G A A T C G A G T C G T C A A C G T A G T C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A T G C G C A T C G A T C A G T A T G C A G T C A T G C G T C A G A T C C G T A C G T A A T G C G T C A A G T C C A T G C T G A A T G C