Information for 4-CTCAGGTGGCCT (Motif 6)

A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C T G C G T A A C T G
p-value:1e-4
log p-value:-1.039e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.3/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGGTGGCCT
NNGCAGGTGNN--
A C G T A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTCAGGTGGCCT
NNCAGGTGNN--
A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTCAGGTGGCCT
GNMCAGGTGTGC-
A C G T A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C A C G T

THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTCAGGTGGCCT
TGACCTCAGGTGACC-
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
G A C T T A C G C G T A T G A C A G T C G A C T A T G C C T G A C A T G T A C G G C A T T A C G T C G A T G A C G T A C A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTCAGGTGGCCT
-TCACGTGACC-
A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCAGGTGGCCT-
-TCACGTGACCGG
A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T A C G T
A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCAGGTGGCCT
GTCACGTGGM--
A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTCAGGTGGCCT
-VCAGGTRDRY-
A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGGTGGCCT
SDGCAGGTGCNS-
A C G T A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTCAGGTGGCCT
GGCAGGTGCA--
A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T A C G T