Information for 7-RACAAAGKAGTA (Motif 8)

T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
Reverse Opposite:
G C A T G C T A A G T C G C A T G T C A T A G C A G C T A C G T C G A T C A T G A G C T A G T C
p-value:1e-4
log p-value:-9.820e+00
Information Content per bp:1.667
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif2007.3
Percentage of Background Sequences with motif2.63%
Average Position of motif in Targets124.2 +/- 61.0bp
Average Position of motif in Background102.5 +/- 72.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----RACAAAGKAGTA
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----RACAAAGKAGTA
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----RACAAAGKAGTA
AAACAGACAAAGGAAT-
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--RACAAAGKAGTA
AAAACAAAGAA---
A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--RACAAAGKAGTA
AAAACAAAGG----
A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-RACAAAGKAGTA
GAACAAAGGG---
A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--RACAAAGKAGTA
GGAACAAAGR----
A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RACAAAGKAGTA
RACAAWGG----
T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--RACAAAGKAGTA
VRRACAAWGG----
A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RACAAAGKAGTA
RNAACAATGG----
A C G T A C G T T C A G C T G A G A T C G C T A T G C A C T G A A T C G A C G T C G T A C T A G C A G T C G T A
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T