Information for 12-GGTAGGTGGT (Motif 17)

A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A G T A C A G T C A C G T C G T A A G T C G T A C
p-value:1e-6
log p-value:-1.409e+01
Information Content per bp:1.867
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif120.1
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets100.1 +/- 57.9bp
Average Position of motif in Background103.7 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-1/MA0124.2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GGTAGGTGGT
-TTAAGTGGT
A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GGTAGGTGGT---
NTTAAGTGGTTNN
A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

ZBTB7C/MA0695.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GGTAGGTGGT---
-NTCGGTGGTCGC
A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGTAGGTGGT----
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGTAGGTGGT--
CGTGGGTGGTCC
A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

GLI3/MA1491.1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGTAGGTGGT--
CGNCGTGGGTGGTCN
A C G T A C G T A C G T A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T

GLI2/MA0734.2/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGTAGGTGGT--
CGNCGTGGGTGGTCN
A C G T A C G T A C G T A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGTAGGTGGT----
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

ZBTB7B/MA0694.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGTAGGTGGT---
-TTCGGTGGTCGC
A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GGTAGGTGGT--
YSTGGGTGGTCT
A C T G C T A G A C G T C G T A C T A G A C T G A C G T A C T G C T A G A C G T A C G T A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T