Information for 5-AGCCATCCTTGG (Motif 8)

C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T
p-value:1e-5
log p-value:-1.155e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFP42/MA1651.1/Jaspar

Match Rank:1
Score:0.63
Offset:-7
Orientation:reverse strand
Alignment:-------AGCCATCCTTGG--
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGCCATCCTTGG-
SCAGYCADGCATGAC
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCCATCCTTGG
GCNGCCATCTTG--
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AGCCATCCTTGG--
GCAGCCAAGCGTGACN
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

NFIC/MA0161.2/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGCCATCCTTGG----
-----TACTTGGCAGA
C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

MF0008.1_MADS_class/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGCCATCCTTGG
--CCATATATGG
C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G
A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCCATCCTTGG--
--CCATATATGGNA
C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCCATCCTTGG
AAGATATCCTT--
A C G T C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCCATCCTTGG--
GATAACATCCTAGTAG
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G A C G T A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AGCCATCCTTGG
GCCGCCATCTTG--
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C G T A G T C A G T C A C G T A C G T A C T G A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T