Information for 4-CGTACGAG (Motif 32)

A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C T G A C G T C G T A A G T C A C T G
p-value:1e-2
log p-value:-6.108e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif12.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets126.0 +/- 0.0bp
Average Position of motif in Background135.6 +/- 45.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gmeb1/MA0615.1/Jaspar

Match Rank:1
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CGTACGAG--
GAGTGTACGTAAGATGG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------CGTACGAG--
GAGTGTACGTAAGATGG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGTACGAG-
GGGTACGTGC
A C G T A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CGTACGAG----
ANATTTTACGAGNNNN
A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PB0094.1_Zfp128_1/Jaspar

Match Rank:5
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------CGTACGAG--
TCTTTGGCGTACCCTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTACGAG-
NTTTTACGAGN
A C G T A C G T A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTACGAG-
-GGACGTGC
A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGTACGAG-
-RTACGTGC
A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T
A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HIF1A/MA1106.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGTACGAG---
-GTACGTGCCC
A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T
A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGTACGAG--
--TACGTGCV
A G T C A C T G A C G T C G T A A G T C A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C