Information for 12-GAGCCCACTGGG (Motif 13)

A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A C T G A C G T A C T G A C T G A C T G A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.828e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets194.0 +/- 0.0bp
Average Position of motif in Background38.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAGCCCACTGGG
GCGCCCCCTGNN
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGCCCACTGGG--
-TGCCCTGAGGGCA
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAGCCCACTGGG--
-TGCCCTNAGGGCA
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAGCCCACTGGG--
-TGCCCTNAGGGCA
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGCCCACTGGG-
GGGGCCCAAGGGGG
A C G T A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGCCCACTGGG---
---TCCCCTGGGGAC
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGCCCACTGGG----
-RGSMTBCTGGGAAAT
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCCACTGGG
TGGGGCCCAC----
A C G T A C G T A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T A C G T A C G T

EBF1/MA0154.4/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGCCCACTGGG----
-NNTCCCCTGGGGANN
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C G T A C A T G A C G T A G T C G A T C G A T C G A T C G C A T C A T G C T A G C T A G T C A G T G C A G A T C G C A T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGCCCACTGGG---
RGMCCTACTRTGTGC
A C T G C G T A A C T G A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C T G A C T G A C G T A C G T A C G T
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C