Information for 3-CTACGGGT (Motif 39)

A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C T G A C G T C G T A A C T G
p-value:1e-2
log p-value:-5.588e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif15.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets139.0 +/- 0.0bp
Average Position of motif in Background86.7 +/- 44.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CTACGGGT----
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTACGGGT-
TATGCGGGTA
A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CTACGGGT--
CATGCGGGTAC
A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

SCRT1/MA0743.2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTACGGGT----
AATTCAACAGGTGGTT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

SCRT2/MA0744.2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTACGGGT----
AAAGCAACAGGTGGTT
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTACGGGT-
GCAACAGGTG
A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T
A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G

OSR1/MA1542.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CTACGGGT
TGCTACTGTT
A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T
G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

PB0050.1_Osr1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTACGGGT---
TNNTGCTACTGTNNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

SNAI2/MA0745.2/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTACGGGT----
NNGACAGGTGCNN
A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

ELK1/MA0028.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTACGGGT
NACTTCCGGT
A C G T A C G T A G T C A C G T C G T A A G T C A C T G A C T G A C T G A C G T
G A T C T C G A A G T C C G A T A C G T T G A C T G A C A C T G A T C G G A C T