Information for 11-GTGGTGATGGAC (Motif 22)

C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A A G C T A G T C C G T A A G T C A G T C C G T A G T A C
p-value:1e-5
log p-value:-1.219e+01
Information Content per bp:1.947
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets116.2 +/- 43.7bp
Average Position of motif in Background182.5 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTGGTGATGGAC-
-TGGGGAAGGGCM
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GTGGTGATGGAC---
---BTGABTGACAGS
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGGTGATGGAC-
-AGGTGHCAGACA
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GTGGTGATGGAC--
----TGATKGATGR
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTGGTGATGGAC--
-AGGTGNCAGACAG
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGGTGATGGAC---
---NTGATTGACAGN
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGGTGATGGAC---
---ATGATKGATGRC
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGGTGATGGAC--
--GRTGMTRGAGCC
C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTGATGGAC
NNHTGTGGTTWN----
A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T

MZF1/MA0056.2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTGATGGAC
NNNTGGGGATTNN-
A C G T A C G T C A T G A C G T A C T G A C T G A C G T A C T G C T G A C G A T A C T G A C T G C G T A A G T C
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T