Information for 2-GGCAGATCGA (Motif 8)

A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G C G T A A C G T A G T C A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-8.468e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD1/MA1109.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGCAGATCGA--
GGACAGATGGCAG
A C G T A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A A C G T A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCAGATCGA-
GGAACAGATGGCA
A C G T A C G T A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A A C G T
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCAGATCGA---
---DGATCRATAN
A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCAGATCGA
AACAGATGGC
A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

ZNF135/MA1587.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGATCGA--
TCAGGAGGTCGAGG
A C G T A C G T A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A A C G T A C G T
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGATCGA--
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGCAGATCGA----
----TATCGATNAN
A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCAGATCGA
AACAGATGGT
A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCAGATCGA
ACCAGATGGC
A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCAGATCGA--
CACGGCAGTTGGTNN
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G C G T A A C G T A G T C A C T G C G T A A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G