Information for 17-GCACATTGTGTG (Motif 19)

A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.899e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background185.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCACATTGTGTG--
NNNCCATTGTGTNAN
A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GCACATTGTGTG
-CTCATTGTC--
A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G
A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCACATTGTGTG-
VAGRACAKWCTGTYC
A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

NR3C2/MA0727.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCACATTGTGTG---
GGGAACATTGTGTTCCC
A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GCACATTGTGTG--
NAGNACANNNTGTNCT
A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

SOX13/MA1120.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCACATTGTGTG
NNCCATTGTNN-
A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCACATTGTGTG---
NGGAACATNATGTACCC
A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCACATTGTGTG-
VAGRACAKNCTGTBC
A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCACATTGTGTG--
NAGAACAGNCTGTNCT
A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCACATTGTGTG-----
-NNNNTTGTGTGCTTNN
A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G