Information for 11-TAGTTTAGCC (Motif 33)

A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T C G T A C G T A C G T A A G T C A C G T C G T A
p-value:1e-2
log p-value:-6.823e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background103.1 +/- 90.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTTAGCC
NNAGATTAGAN
A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAGTTTAGCC
ACTAGTTAAC--
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTTAGCC
ANCGTTTANN-
A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

FOXN3/MA1489.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAGTTTAGCC
TTGTTTAC--
A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGTTTAGCC
TATTGTTTATT-
A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

BARHL1/MA0877.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGTTTAGCC
NCGTTTAN--
A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGTTTAGCC
TTGTTTAC--
A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGTTTAGCC
-GGATTAGC-
A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGTTTAGCC-
-TGTCTAGACA
A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C A C G T
A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGTTTAGCC
TTGTTTAC--
A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C A G T C
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T