Information for 1-GNTKAATTGTGG (Motif 2)

C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G
Reverse Opposite:
A G T C A G T C G T C A A G T C G C T A T G C A A G C T A G C T G T A C C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.422e+01
Information Content per bp:1.703
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif125.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets64.7 +/- 55.3bp
Average Position of motif in Background110.7 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:GNTKAATTGTGG--
--------GTGGAT
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GNTKAATTGTGG---
CAATGCATTGTGGGTA
A C G T C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GNTKAATTGTGG----
----NNHTGTGGTTWN
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RREB1/MA0073.1/Jaspar

Match Rank:4
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------GNTKAATTGTGG
NGGGGGGGGGTGGTTTGGGG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GNTKAATTGTGG----
------CTGTGGTTTN
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GNTKAATTGTGG
-BTBRAGTGSN-
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GNTKAATTGTGG-------
--NNANTGGTGGTCTTNNN
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GNTKAATTGTGG---
-----NNTGTGGTTT
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GNTKAATTGTGG---
----GTCTGTGGTTT
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GNTKAATTGTGG---
-----GCTGTGGTTT
C T A G A C G T A C G T A C T G C T G A C T G A A C G T C G A T A C T G A C G T C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T