Information for 6-ATGTGGGAAGTC (Motif 6)

C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C C G T A A G T C C G T A A C G T
p-value:1e-4
log p-value:-1.099e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets85.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF75D/MA1601.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATGTGGGAAGTC
ATGTGGGAAA--
C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATGTGGGAAGTC
-CCTGGGAAAG-
C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATGTGGGAAGTC
-CSTGGGAAAD-
C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGGAAGTC
TAGGTGTGAAG--
A C G T C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGGAAGTC
AAGGTGTKAA---
A C G T C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T

TBX18/MA1565.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGTGGGAAGTC
GGAGGTGTGAAA--
A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A A C G T A C G T

ETV5/MA0765.2/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATGTGGGAAGTC-
--NCCGGAAGTNN
C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C A C G T
A C G T A C G T T C A G T A G C T G A C T A C G T A C G T C G A C T G A T A C G A G C T T A C G T A C G

GLI3/MA1491.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATGTGGGAAGTC-
CGNCGTGGGTGGTCN
A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T

Znf281/MA1630.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGGAAGTC
GGTGGGGGAGG--
A C G T C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C
C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATGTGGGAAGTC-
-CGTGGGTGGTCC
C G T A A C G T A C T G A C G T A C T G A C T G A C T G C G T A C G T A A C T G A C G T A G T C A C G T
A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C