| p-value: | 1e-6 |
| log p-value: | -1.469e+01 |
| Information Content per bp: | 1.818 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 38.9 |
| Percentage of Background Sequences with motif | 0.08% |
| Average Position of motif in Targets | 153.3 +/- 18.8bp |
| Average Position of motif in Background | 97.7 +/- 52.5bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nr2e3/MA0164.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AGCYTWRWKGMC CAAGCTT------- |
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POL010.1_DCE_S_III/Jaspar
| Match Rank: | 2 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AGCYTWRWKGMC CAGCC-------- |
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CDX1/MA0878.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.53 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AGCYTWRWKGMC -GTTTTATGGCC |
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HOXD13/MA0909.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.53 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AGCYTWRWKGMC -GTTTTATTGGG |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 5 |
| Score: | 0.53 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AGCYTWRWKGMC ---CTAATKGV- |
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|
CDX4/MA1473.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.52 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AGCYTWRWKGMC -GTTTTATTGCC |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 7 |
| Score: | 0.52 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGCYTWRWKGMC TGATTTATGGCC |
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Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.51 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGCYTWRWKGMC --TTTNATTGCY |
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Rarg(var.2)/MA0860.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.51 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AGCYTWRWKGMC--- TGACCTTTCGTGACCTT |
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PH0013.1_Cdx2/Jaspar
| Match Rank: | 10 |
| Score: | 0.51 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AGCYTWRWKGMC--- NAATTTTATTACCNNN |
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