| p-value: | 1e-3 |
| log p-value: | -7.225e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 9.3 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 82.0 +/- 0.0bp |
| Average Position of motif in Background | 90.9 +/- 26.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0168.1_Hnf1b/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------AACTAGCCAT AGCTGTTAACTAGCCGT |
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PH0040.1_Hmbox1/Jaspar
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------AACTAGCCAT- GANGTTAACTAGTTTNN |
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HMBOX1/MA0895.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AACTAGCCAT GTTAACTAGN--- |
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SD0002.1_at_AC_acceptor/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AACTAGCCAT NNACTTGCCTT |
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PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AACTAGCCAT--- NNAATTAGTCACGGT |
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|
Smad4/MA1153.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AACTAGCCAT -TCTAGACA- |
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|
PH0034.1_Gbx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------AACTAGCCAT- AGCGCTAATTAGCGATT |
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POL004.1_CCAAT-box/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AACTAGCCAT--- -ACTAGCCAATCA |
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LBX1/MA0618.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AACTAGCCAT TTAATTAG---- |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | AACTAGCCAT---- ----GGCCATTAAC |
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