Information for 3-CGTTAGAT (Motif 36)

A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A C G T A A G T C A C T G
p-value:1e-2
log p-value:-5.731e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif134.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background111.9 +/- 106.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OVOL2/MA1545.1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----CGTTAGAT-
GTACCGTTATGTG
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

PB0194.1_Zbtb12_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CGTTAGAT----
TATCATTAGAACGCT
A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

OVOL1/MA1544.1/Jaspar

Match Rank:3
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CGTTAGAT-
AAAACCGTTATTTG
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T
C G T A C T G A C G T A G C T A A G T C A G T C C A T G A C G T A C G T G T C A A G C T A G C T G A C T A T C G

PB0040.1_Lef1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGTTAGAT-----
AATCCCTTTGATCTATC
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGTTAGAT-----
ATTTCCTTTGATCTATA
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------CGTTAGAT-
ATGGAAACCGTTATTTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------CGTTAGAT-
TTGAAAACCGTTAATTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

Isl1/MA1608.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGTTAGAT
ATCCATTAGCA
A C G T A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

HOXA9/MA0594.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGTTAGAT
GTCGTAAACG
A C G T A C G T A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T
T C A G G A C T G T A C T C A G A G C T G C T A G C T A G C T A G A T C T A C G

GATA1/MA0035.4/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTTAGAT-----
--NNAGATTAGAN
A G T C A C T G A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A