Information for 5-AGCATSRCCCTC (Motif 6)

C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C
Reverse Opposite:
A T C G C G T A T C A G A C T G C T A G A G C T A T G C C G T A A C G T A T C G A G T C A C G T
p-value:1e-4
log p-value:-1.133e+01
Information Content per bp:1.702
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif532.0
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets107.8 +/- 37.7bp
Average Position of motif in Background105.0 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX5/MA0014.3/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCATSRCCCTC
GAGCGTGACCCC-
A C G T C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCATSRCCCTC
CAGCC--------
A C G T C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Znf281/MA1630.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGCATSRCCCTC-
--CCTCCCCCACC
C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C A C G T
A C G T A C G T A G T C G T A C C A G T T G A C T A G C A T G C A T G C A T G C T C G A A T G C G A T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGCATSRCCCTC----
NNNNTGACCCGGCGCG
C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGCATSRCCCTC
AAGCTTG------
A C G T C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RELB/MA1117.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGCATSRCCCTC
-GAATTCCCCGG
C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C
A C G T C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCATSRCCCTC---
TAAGCCACGCCCCCTTT
A C G T A C G T C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C A C G T A C G T A C G T
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

SP1/MA0079.4/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCATSRCCCTC-
TAAGCCACGCCCACT
A C G T A C G T C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C A C G T
A G C T G C T A T C G A C T A G G T A C G A T C G T C A A G T C C T A G A G T C G T A C A G T C G T C A G A T C G A C T

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AGCATSRCCCTC----
----TGACCYYTGVYN
C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AGCATSRCCCTC
GCAGCCAAGCGTGACN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A T G C G T C A A C G T T A C G T C G A A G T C G T A C A G T C A C G T T A G C
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C A C G T A C G T A C G T