| p-value: | 1e-4 |
| log p-value: | -1.023e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 1.2 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 80.0 +/- 0.0bp |
| Average Position of motif in Background | 156.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTAGACCCAGTT NGNTCTAGAACCNGV- |
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RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTAGACCCAGTT- -BTGACCTAVTTW |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTAGACCCAGTT --TGACCTARTT |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTAGACCCAGTT --TGACCTARTT |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTAGACCCAGTT--- -TTGACCTANTTATN |
|
|
|
Smad4/MA1153.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTAGACCCAGTT TCTAGACA----- |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTAGACCCAGTT-- --TGACCTANTTAN |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTAGACCCAGTT- NNHYTGACCTAGWTT |
|
|
|
PB0157.1_Rara_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTAGACCCAGTT-- NNCNTGACCCCGCTCT |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTAGACCCAGTT -NTGACCTAATT |
|
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