Information for 6-ACAATACCAT (Motif 13)

C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T
Reverse Opposite:
T C G A C A G T C T A G C T A G A C G T C G T A A G C T C G A T A T C G C G A T
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.815
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif509.6
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets114.4 +/- 41.2bp
Average Position of motif in Background97.1 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ACAATACCAT----
AACAATAACATTGTT
A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T A C G T A C G T A C G T A C G T
T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ACAATACCAT--
CAAACAACAACACCT
A C G T A C G T A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ACAATACCAT
NAACAAT-----
A C G T A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T
G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAATACCAT
GACAATGNN--
A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACAATACCAT----
CATACAATACGAAATAA
A C G T A C G T A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

SOX8/MA0868.2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACAATACCAT
AGAACAATGG---
A C G T A C G T A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T A C G T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACAATACCAT
AAAACAATAG---
A C G T A C G T A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAATACCAT
AACAAT-----
A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.66
Offset:-8
Orientation:forward strand
Alignment:--------ACAATACCAT----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0072.1_Sox5_1/Jaspar

Match Rank:10
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------ACAATACCAT
TTTAGAACAATAAAAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T G C C G T A C T G A A C G T C G T A A G T C A G T C G T C A A G C T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T