Information for 6-CAGTCAAGACCG (Motif 7)

A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G
p-value:1e-5
log p-value:-1.189e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD5/MA1557.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGTCAAGACCG
-TGTCTAGACA-
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
A C G T G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAAGACCG
ACCACTCAAAA---
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T A C G T

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGTCAAGACCG
-CGTCTAGACA-
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
A C G T G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CAGTCAAGACCG
TAACCACTCAAGAA--
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGTCAAGACCG
AAAAGTCAA-----
A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCAAGACCG-
AAGGTCATGACCTT
A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGTCAAGACCG
AGCCACTCAAG----
A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CAGTCAAGACCG
---TCTAGACA-
A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAGTCAAGACCG-
GAGGTCATGACCTC
A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCAAGACCG-
GAGGTCATGACCTC
A C G T A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G C G T A A G T C A G T C A C T G A C G T
T C A G C T G A C A T G C A T G A C G T A G T C C T G A A G C T T C A G T G C A T G A C G T A C A G C T A G T C