Information for 6-TGATGGAGAG (Motif 14)

G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G
Reverse Opposite:
A T G C A C G T G T A C A G C T G T A C A G T C C G T A A C G T T A G C C G T A
p-value:1e-11
log p-value:-2.671e+01
Information Content per bp:1.888
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.15%
Number of Background Sequences with motif144.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets89.8 +/- 48.8bp
Average Position of motif in Background106.2 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)2.1
Multiplicity (# of sites on avg that occur together)1.73
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0139.1_Irf5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGATGGAGAG----
TTGACCGAGAATTCC
A C G T G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGATGGAGAG
TGATKGATGR
G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G
C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGATGGAGAG-
NTGATTGACAGN
A C G T G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGATGGAGAG
GRTGMTRGAGCC
A C G T A C G T G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGATGGAGAG----
NNNACCGAGAGTNNN
A C G T G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGATGGAGAG-
BTGABTGACAGS
A C G T G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGATGGAGAG--
TGAGTGACAGSC
G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PH0134.1_Pbx1/Jaspar

Match Rank:8
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------TGATGGAGAG
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGATGGAGAG-
ATGATKGATGRC
A C G T G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGATGGAGAG-
-AATGGAAAAT
G C A T A T C G G T C A A C G T A C T G A C T G C T G A A C T G T G C A A T C G A C G T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T