Information for 11-TAAGAGATGCAT (Motif 16)

A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C C G T A A C G T A G T C A C G T A G T C A C G T A C G T C G T A
p-value:1e-3
log p-value:-8.510e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0148.1_Pou3f3/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAAGAGATGCAT------
-AAAATATGCATAATAAA
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TAAGAGATGCAT----
------ATGMATATDC
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

HAND2/MA1638.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAAGAGATGCAT
-ACCAGATGGC-
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAAGAGATGCAT
-AACAGATGGT-
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAAGAGATGCAT
-AACAGGTGCA-
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T
A C G T C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TAAGAGATGCAT--
GAAAAAATTGCAAGG
A C G T A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

Ptf1a/MA1618.1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TAAGAGATGCAT-
AAACAGATGTTTA
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TAAGAGATGCAT
TGAATTATGCAT
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TAAGAGATGCAT-
---GATTTGCATA
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TAAGAGATGCAT---
---ATGATKGATGRC
A C G T C G T A C G T A A C T G C G T A A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C