| p-value: | 1e-3 |
| log p-value: | -9.152e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 105.0 +/- 0.0bp |
| Average Position of motif in Background | 57.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATGTTTGGCTGC GTCATGCHTGRCTGS |
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PB0121.1_Foxj3_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATGTTTGGCTGC- NNCTTTGTTTTGNTNNN |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATGTTTGGCTGC NGTCACGCTTGGCTGC |
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POL004.1_CCAAT-box/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATGTTTGGCTGC- -TGATTGGCTANN |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | ATGTTTGGCTGC ----TWGTCTGV |
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|
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ZNF449/MA1656.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATGTTTGGCTGC- NNGGTTGGGCTTNN |
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|
|
NFYC/MA1644.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATGTTTGGCTGC NCTGATTGGNN-- |
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|
|
NFYA/MA0060.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ATGTTTGGCTGC NCTGATTGGNN-- |
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|
NFIX/MA0671.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | ATGTTTGGCTGC ---NTTGGCANN |
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PB0060.1_Smad3_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATGTTTGGCTGC- NNTNNTGTCTGGNNTNG |
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