Information for 15-CTGACCGGGA (Motif 35)

A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G T C A C T G A C T G A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.999e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background91.5 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTGACCGGGA-----
NNNACCGAGAGTNNN
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCGGGA---
NNNNTGACCCGGCGCG
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

RORA/MA0071.1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGACCGGGA-
-TGACCTTGAT
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T
A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTGACCGGGA-----
GNNACCGAGAATNNN
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGACCGGGA
-TGACCT---
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

FLI1/MA0475.2/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTGACCGGGA---
---ACCGGAAGTG
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T G A C T G A C C T A G A C T G T G C A G C T A T C A G A G C T T C A G

ESRRA/MA0592.3/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGACCGGGA--
NNTGACCTTGANN
A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTGACCGGGA--
NNHYTGACCTAGWTT
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T
A C G T G A T C G A C T G A T C A C G T A C T G T C G A A G T C A G T C A G C T C T G A T C A G C G A T C G A T G C A T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGACCGGGA-----
TTGACCGAGAATTCC
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ETS2/MA1484.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CTGACCGGGA--
--GACCGGAAGT
A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T C T A G C T G A T A G C G T A C C T A G T A C G T G C A G C T A C T A G A G C T