Information for 15-TAAACCCCTAAA (Motif 21)

G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A
Reverse Opposite:
G A C T A C G T G A C T C G T A A T C G C T A G C A T G C A T G C G A T A C G T C G A T C G T A
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.728
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif279.7
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets105.5 +/- 47.3bp
Average Position of motif in Background103.2 +/- 53.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0121.1_Obox1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAAACCCCTAAA
NTAGTTAATCCCCTTAN
A C G T A C G T A C G T A C G T A C G T G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TAAACCCCTAAA
AGGCTAATCCCCAANG
A C G T A C G T A C G T A C G T G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAAACCCCTAAA
TAATCCCN----
G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAAACCCCTAAA
CTAATCCTCTT--
A C G T G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAAACCCCTAAA---
AGGAGACCCCCAATTTG
A C G T A C G T G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A A C G T A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TAAACCCCTAAA-
---VGCCATAAAA
G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A A C G T
A C G T A C G T A C G T T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

PH0122.1_Obox2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TAAACCCCTAAA
ATAGTTAATCCCCCTCA
A C G T A C G T A C G T A C G T A C G T G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TAAACCCCTAAA---
---NGYCATAAAWCH
G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TAAACCCCTAAA----
TAAAGTCGTAAAACAT
G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A A C G T A C G T A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TAAACCCCTAAA-
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T G C A T C G T A G T C A C G T A G T A C G T A C G A T C T A G C G C A T C T G A G T C A C T G A A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A