Information for 7-GAGTTGTCGA (Motif 9)

A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A
Reverse Opposite:
C G A T G T A C A C T G C T G A A G T C G T C A C G T A A G T C A C G T A G T C
p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.804
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif58.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets114.0 +/- 42.3bp
Average Position of motif in Background87.3 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCGA---
GCGGAGGTGTCGCCTC
A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

ZNF274/MA1592.1/Jaspar

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GAGTTGTCGA-
GGTATGAGTTCTCGCT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T
C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCGA---
AACGAGCTGTCAATAC
A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCGA---
AACTAGCTGTCAATAC
A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCGA---
AAAGACCTGTCAATCC
A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCGA---
AAAGACCTGTCAATAC
A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCGA---
AATTACCTGTCAATAC
A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GAGTTGTCGA----
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

NKX2-2/MA1645.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GAGTTGTCGA
NNNTTGAGTGGNNN-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGTTGTCGA
DAGGTGTBAA
A C T G C G T A C T A G C G A T A C G T A C T G A G C T G T A C C A T G G C T A
C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A