Information for 11-AAAGTCGAGC (Motif 23)

C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C T G C G T A A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-7.965e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.0 +/- 0.0bp
Average Position of motif in Background137.8 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAAGTCGAGC
TCCAAAGTCCAGA
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAAGTCGAGC
TCCAAAGTCCAAA
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAGTCGAGC
AAAAGTCAA--
A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AAAGTCGAGC--
GGCAAAAGTCCAATAA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

PB0136.1_IRC900814_2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AAAGTCGAGC--
ATGGAAAGTCGTAAAA
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C A C G T A C G T
C T G A A G C T A C T G C T A G C T G A T C G A G T C A A C T G G A C T A G T C C A T G A C G T C T G A C G T A T C G A G C T A

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAAGTCGAGC---
ATAAAGGCGCGCGAT
A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C A C G T A C G T A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAAGTCGAGC---
ATAAGGGCGCGCGAT
A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

ZNF135/MA1587.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAAGTCGAGC
TCAGGAGGTCGAGG
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------AAAGTCGAGC
TTCAAAWTAAAAGTC----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTCGAGC
CANAGNNCAAAGTCCA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A G T C A C T G C G T A A C T G A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T