Information for 25-GAACAACTAT (Motif 35)

A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C T G A C G T A C G T A C T G A C G T A C G T A G T C
p-value:1e-2
log p-value:-6.603e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif38.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets179.0 +/- 0.0bp
Average Position of motif in Background107.9 +/- 94.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GAACAACTAT--
NNNTAACAATTATAN
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

MYF6/MA0667.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAACAACTAT-
-AACAGCTGTT
A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAACAACTAT--
TTAAGAACAATAAATT
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAACTAT
NTTNAGAACAATTA-
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GAACAACTAT--
TTTAGAACAATAAAAT
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

SOX12/MA1561.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAACAACTAT
ACCGAACAATG--
A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T
G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAACAACTAT
NNCNNAACAATTNT
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

MSC/MA0665.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GAACAACTAT-
-AACAGCTGTT
A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T
A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAACAACTAT-
NNTNANAACAATTNNA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAACAACTAT
RNAACAATGG-
A C G T A C T G C G T A C G T A A G T C C G T A C G T A A G T C A C G T C G T A A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T