Information for 3-GGCTTCYTGCCA (Motif 4)

C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A
Reverse Opposite:
A C G T A T C G A T C G T G A C C G T A C T G A A C T G C T G A T G C A A C T G A G T C G T A C
p-value:1e-10
log p-value:-2.354e+01
Information Content per bp:1.715
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets111.6 +/- 21.7bp
Average Position of motif in Background125.9 +/- 49.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGCTTCYTGCCA
TTGGCATGGTGCCA
A C G T A C G T C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGCTTCYTGCCA--
GTTGGCACGGTGCCAGG
A C G T A C G T A C G T C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A A C G T A C G T
A T C G G C A T A C G T A C T G A C T G G T A C C T G A A G T C A T C G C A T G G A C T A C T G A G T C A G T C G T C A C T A G A T C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGCTTCYTGCCA-
TGGCAGNCTGCCAG
A C G T C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A A C G T
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

ETV4/MA0764.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCTTCYTGCCA
NNCTTCCTGN--
C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCTTCYTGCCA--
GTTGGCACGGTGCCAAC
A C G T A C G T A C G T C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A A C G T A C G T
A T C G G A C T A C G T A C T G A T C G G T A C C T G A A G T C T A C G T C A G G A C T A C T G A T G C G T A C C G T A C T G A A T G C

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGCTTCYTGCCA
CACTTCCTGT--
C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGCTTCYTGCCA-
CTTGGCANNNTGCCAA
A C G T A C G T A C G T C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGCTTCYTGCCA-
---TTCCCGCCWG
C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A A C G T
A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCTTCYTGCCA
-ATTTCCTGTN-
C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A
A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T

TFDP1/MA1122.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTTCYTGCCA
-NNTTCCCGCCN
C A T G C T A G G T A C A C G T G A C T G T A C G A C T C G A T A C T G T A G C T A G C G T C A
A C G T A T G C A T G C A C G T G A C T T A G C A T G C A T G C C T A G A T G C A T G C A T G C