Information for 16-TCTCAGCTCACT (Motif 23)

A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G C G T A A T C G A G T C A C G T A C T G C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.164e+01
Information Content per bp:1.980
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.5 +/- 53.7bp
Average Position of motif in Background145.8 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)3.8
Multiplicity (# of sites on avg that occur together)5.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTCAGCTCACT
-ATCACCCCAC-
A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
A C G T T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T

SIX1/MA1118.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCTCAGCTCACT
TATCAGGTTAC-
A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTCAGCTCACT
GKVTCADRTTWC-
A C G T A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTCAGCTCACT
-ATCACCCCAT-
A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTCAGCTCACT
---AAGGTCAC-
A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCTCAGCTCACT-
NNCTCACCTCCTNN
A C G T A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTCAGCTCACT
GCTCCGCCCMCY
A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCTCAGCTCACT
--TRAGGTCA--
A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCTCAGCTCACT
GKMTCADRTTWC-
A C G T A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCTCAGCTCACT
--HCAGCTGDTN
A C G T A G T C A C G T A G T C C G T A A C T G A T G C A C G T A G T C C G T A A G T C A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T