Information for 17-CTAGGCCACC (Motif 37)

A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A C T G A G T C A G T C A C G T C G T A A C T G
p-value:1e-3
log p-value:-6.929e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background72.2 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CTAGGCCACC
CTAGGCCT--
A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTAGGCCACC----
--AGACCACCCASR
A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CTAGGCCACC
CAAGGHCANV
A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTAGGCCACC
CNAGGCCT--
A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CTAGGCCACC--
AAWCTAGGTCARDNN
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAGGCCACC
-AAGGTCAC-
A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

NR5A1/MA1540.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTAGGCCACC
GTCAAGGTCAC-
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTAGGCCACC
NTCAAGGTCA--
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTAGGCCACC-----
CATAAGACCACCATTAC
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTAGGCCACC
AAYTAGGTCA--
A C G T A C G T A G T C A C G T C G T A A C T G A C T G A G T C A G T C C G T A A G T C A G T C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T