Information for 7-MACCAGACMTGC (Motif 8)

T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C
Reverse Opposite:
A T C G A G T C C T G A C A T G A C T G A C G T A G T C C G A T A C T G A C T G C A G T A C T G
p-value:1e-4
log p-value:-9.380e+00
Information Content per bp:1.655
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif41.18%
Number of Background Sequences with motif3340.1
Percentage of Background Sequences with motif6.99%
Average Position of motif in Targets88.6 +/- 62.7bp
Average Position of motif in Background100.6 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:MACCAGACMTGC
NNACTTACCTN-
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:MACCAGACMTGC
--CCAGACRSVB
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---MACCAGACMTGC--
CAAATCCAGACATCACA
A C G T A C G T A C G T T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

TCF3/MA0522.3/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:MACCAGACMTGC--
---CGCACCTGCCC
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

ZKSCAN5/MA1652.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:MACCAGACMTGC---
-NNCTCACCTCCTNN
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C A C G T A C G T A C G T
A C G T A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:MACCAGACMTGC--
---CGCACCTGCCG
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MACCAGACMTGC
--CCAGACAG--
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:MACCAGACMTGC--
--GCACACCTGKNC
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C A C G T A C G T
A C G T A C G T T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C

PB0151.1_Myf6_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--MACCAGACMTGC-
AGCAACAGCCGCACC
A C G T A C G T T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

ZEB1/MA0103.3/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:MACCAGACMTGC--
---CCCACCTGCGC
T G A C G C T A G T A C A G T C C G T A A C T G C G T A G T A C G T A C A G C T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C