Information for 13-ACATACGGAG (Motif 25)

C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C G T A C T G A C G T
p-value:1e-3
log p-value:-7.849e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 0.0bp
Average Position of motif in Background157.2 +/- 37.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--ACATACGGAG
NGCCATATGGTG
A C G T A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGAG
NACATATGGN-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ACATACGGAG
ACATATGG--
C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGAG
ACCATATGGC-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACATACGGAG----
GTACATCCGGATTTTT
A C G T A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ACATACGGAG-
-----CGGAGC
C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGAG
AACAKATGGY-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACATACGGAG
AACATATGTT-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ACATACGGAG
TACATCCGGGT
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

OLIG2/MA0678.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACATACGGAG
ACCATATGGT-
A C G T C G T A A G T C C G T A A C G T C G T A A G T C A C T G A C T G C G T A A C T G
C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T A C G T