Information for 1-AATAACAATTTG (Motif 1)

C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C G T A C G T A C T G A C G T A C G T G T C A A C G T A C G T
p-value:1e-18
log p-value:-4.320e+01
Information Content per bp:1.974
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.6 +/- 33.7bp
Average Position of motif in Background148.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AATAACAATTTG
NNCNNAACAATTNT
A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

PB0063.1_Sox13_1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AATAACAATTTG--
TTAAGAACAATAAATT
A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AATAACAATTTG
NTTNAGAACAATTA-
A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AATAACAATTTG
--NAACAAT---
C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G
A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:5
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AATAACAATTTG---
TNCNNAACAATTTTTNC
A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AATAACAATTTG
AAAAATAACAAACGG
A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0172.1_Sox1_2/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AATAACAATTTG--
NNNTAACAATTATAN
A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AATAACAATTTG--
TTTAGAACAATAAAAT
A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:AATAACAATTTG
---AACAAT---
C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AATAACAATTTG-
NNTNANAACAATTNNA
A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C T G A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A