Information for 21-TCAAAAGCTAAT (Motif 27)

A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C T G C G T A
p-value:1e-3
log p-value:-8.407e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background121.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TCAAAAGCTAAT
AAGGTCAAAAGGTCAA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TCAAAAGCTAAT
AAAGGTCAAAAGGTCA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCAAAAGCTAAT-------
--CAAAGCTAATTAGNTTN
A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TCAAAAGCTAAT
GAGGTCAAAAGGTCA-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A A C G T

RARA/MA0729.1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCAAAAGCTAAT--
GAGGTCAAAAGGTCAATG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCAAAAGCTAAT--------
---AAAGCTAATTAGCGAAA
A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T G C A G T C A T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A T G C T G A C G T A C T G A

DPRX/MA1480.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCAAAAGCTAAT---
-----AGATAATCCC
A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

PH0074.1_Hoxd1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCAAAAGCTAAT-------
--NNNAGCTAATTAGCTTA
A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCAAAAGCTAAT
ASATCAAAGG-----
A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T A C G T A C G T A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCAAAAGCTAAT----
-NWTAAYCYAATCAWN
A C G T A G T C C G T A C G T A C G T A C G T A A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T