Information for 2-AGAATNTMAGGG (Motif 2)

C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G
Reverse Opposite:
G T A C G T A C A G T C A C G T A C T G T C G A A G T C C G T A C G A T C A G T A G T C A G C T
p-value:1e-5
log p-value:-1.324e+01
Information Content per bp:1.701
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif2330.4
Percentage of Background Sequences with motif2.74%
Average Position of motif in Targets87.2 +/- 52.6bp
Average Position of motif in Background99.7 +/- 74.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGAATNTMAGGG----
----TGTCAGGGGGCG
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAATNTMAGGG-----
-AAATTCAAGTGGNTTN
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGAATNTMAGGG--
AACAATTTCAGTGTT
A C G T C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T
C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

Nkx3-2/MA0122.3/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAATNTMAGGG-----
----NTTAAGTGGTTNN
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAATNTMAGGG--
----NTCAAGTGGN
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGAATNTMAGGG--
-----TTAAGTGGT
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:AGAATNTMAGGG-
----NTCAAGTGG
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGAATNTMAGGG---
-----TTGAGTGSTT
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGAATNTMAGGG----
NNNNTGCCAGTGATTG
C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--AGAATNTMAGGG-
NNNGTAACTANGNNA
A C G T A C G T C T G A A C T G G C T A C G T A C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C T G A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A