| p-value: | 1e-6 |
| log p-value: | -1.432e+01 |
| Information Content per bp: | 1.922 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 0.47% |
| Number of Background Sequences with motif | 7.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 80.6 +/- 56.5bp |
| Average Position of motif in Background | 88.4 +/- 57.8bp |
| Strand Bias (log2 ratio + to - strand density) | 1.2 |
| Multiplicity (# of sites on avg that occur together) | 2.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CATGGCTGTCTG- GTCATGCHTGRCTGS |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | CATGGCTGTCTG- -----CTGTCTGG |
|
|
|
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CATGGCTGTCTG- ---VBSYGTCTGG |
|
|
|
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CATGGCTGTCTG- NGTCACGCTTGGCTGC |
|
|
|
ZFP42/MA1651.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------CATGGCTGTCTG-- GTTCCAAAATGGCTGCCTCCG |
|
|
|
PB0060.1_Smad3_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CATGGCTGTCTG------ -NNTNNTGTCTGGNNTNG |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | CATGGCTGTCTG- -----TWGTCTGV |
|
|
|
YY2/MA0748.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CATGGCTGTCTG AGATGGCGGCG-- |
|
|
|
POL009.1_DCE_S_II/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | CATGGCTGTCTG ----GCTGTG-- |
|
|
|
ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | CATGGCTGTCTG--- ---VCCTCTCTGDDY |
|
|
|