Information for 16-TCGCACAT (Motif 41)

A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A G T C A C T G C T G A
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.950
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif38.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets86.3 +/- 56.7bp
Average Position of motif in Background73.3 +/- 45.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCGCACAT---
-GACACATGGC
A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TCGCACAT-
TTMACACCTT
A C G T A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCGCACAT-
NTTTTCACACCTT
A C G T A C G T A C G T A C G T A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCGCACAT------
CGAAGCACACAAAATA
A C G T A C G T A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

HIF1A/MA1106.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCGCACAT--
NNGCACGTNC
A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCGCACAT--
--GCACGTAY
A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCGCACAT
TTTCACACCT
A C G T A C G T A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCGCACAT
TCACACCT
A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCGCACAT
KTTCACACCT
A C G T A C G T A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

ZNF75D/MA1601.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCGCACAT
TTTCCCACAN
A C G T A C G T A G C T A G T C A C T G A G T C C G T A A G T C C G T A A C G T
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T