Information for 1-AGACTAGCTACA (Motif 8)

C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A C T G A G T C A C G T C G T A A C T G A C G T A G T C A C G T
p-value:1e-4
log p-value:-1.050e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRTC2/MA1479.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGACTAGCTACA--
--AATTGATACATT
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

DMRTA2/MA1478.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGACTAGCTACA--
--AATTGTTACATT
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

GATA1/MA0035.4/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACTAGCTACA
NNAGATTAGAN---
A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGACTAGCTACA--
---NTTGATACATT
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGACTAGCTACA
BCAGACWA------
A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGACTAGCTACA------
--ACTTGCTACCTACACC
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGACTAGCTACA-
-SCCTAGCAACAG
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0154.1_Osr1_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGACTAGCTACA------
--ACATGCTACCTAATAC
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGACTAGCTACA---
GAAAACTAGTTAACATC
A C G T A C G T C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGACTAGCTACA
--ACTAGTTAAC
C G T A A C T G C G T A A G T C A C G T C G T A A C T G A G T C A C G T C G T A A G T C C G T A
A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C