Information for 8-CCCAGACAACAT (Motif 8)

A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets111.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCCAGACAACAT-
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCCAGACAACAT
-CCAGACAG---
A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCCAGACAACAT
-BCAGACWA---
A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CCCAGACAACAT
-CCAGACRSVB-
A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad4/MA1153.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCAGACAACAT
TCTAGACA----
A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGACAACAT
TGCCCAGNHW----
A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCCAGACAACAT
CGCCCCCTGACA----
A C G T A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCCAGACAACAT
ATGCCAGACN----
A C G T A C G T A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCAGACAACAT----
--AAGATAAGATAACA
A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A A C T G C G T A G A C T C G T A C T G A A C T G C G T A A G C T G C T A C T G A A C G T G T C A

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCAGACAACAT-
---AGATAAGANN
A G T C A G T C A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C