Information for 3-ATTTTTTGCG (Motif 3)

C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A C G T A C G T A C G T A C G T A C G T A A C G T
p-value:1e-5
log p-value:-1.155e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTTGCG----
ANATTTTTGCAANTN
A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

ZNF384/MA1125.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTTGCG-
TTTTTTTTTANN
A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T
C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTTGCG---
TTTTTTTTCNNGTN
A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATTTTTTGCG
GCTATTTTTAGC-
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T

CDX2/MA0465.2/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTTGCG-
NTTTTATTGCNN
A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

MEF2A/MA0052.4/Jaspar

Match Rank:6
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTTTTGCG
NNTCTATTTTTAGNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTTGCG
KCTATTTTTRGH-
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATTTTTTGCG-
TTCTATTTTTAGNNN
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATTTTTTGCG----
--TTTTCGCGCGAA
C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTTGCG
GCTATTTATAGC-
A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T