| p-value: | 1e-7 |
| log p-value: | -1.655e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 0.47% |
| Number of Background Sequences with motif | 2.6 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 124.5 +/- 24.9bp |
| Average Position of motif in Background | 119.5 +/- 56.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0206.1_Zic2_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CAGCACGAGA CCACACAGCAGGAGA |
|
|
|
PB0205.1_Zic1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CAGCACGAGA CCACACAGCAGGAGA |
|
|
|
Zic1::Zic2/MA1628.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAGCACGAGA CACAGCAGGGG- |
|
|
|
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----CAGCACGAGA GAGCACAGCAGGACA |
|
|
|
Arntl/MA0603.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CAGCACGAGA-- --NCACGTGACN |
|
|
|
MLXIPL/MA0664.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CAGCACGAGA- -ATCACGTGAT |
|
|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CAGCACGAGA CACAGCAGGGGG |
|
|
|
bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAGCACGAGA-- --KCACGTGMCN |
|
|
|
BHLHE40/MA0464.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CAGCACGAGA- -ATCACGTGAC |
|
|
|
ARNT2/MA1464.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CAGCACGAGA- -NGCACGTGAC |
|
|
|