Information for 4-GCTCYYWCCTCW (Motif 4)

A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
Reverse Opposite:
G C A T A C T G C G T A A C T G A T C G C G T A C T G A C T A G C T A G C G T A C A T G A T G C
p-value:1e-4
log p-value:-9.678e+00
Information Content per bp:1.737
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif5315.0
Percentage of Background Sequences with motif5.70%
Average Position of motif in Targets93.3 +/- 71.6bp
Average Position of motif in Background99.8 +/- 79.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX18/MA1565.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTCYYWCCTCW
NTTCACACCTCC
A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

TBX15/MA0803.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTCYYWCCTCW
--TCACACCT--
A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTCYYWCCTCW-------
GCCTCCTCCMTCWGACTGKS
A C G T A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

TBX1/MA0805.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCTCYYWCCTCW
--TCACACCT--
A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTCYYWCCTCW
CAGCTGTTTCCT--
A C G T A C G T A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCTCYYWCCTCW---
-NNCTCACCTCCTNN
A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T A C G T A C G T A C G T
A C G T A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

MGA/MA0801.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCTCYYWCCTCW
--TCACACCT--
A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

E2F6/MA0471.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTCYYWCCTCW
NNTTCCCGCCNNN
A C G T A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
A T G C A G T C A G C T A G C T A T G C T A G C G A T C C A T G A T G C A G T C G A T C A G T C A T G C

RUNX3/MA0684.2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCTCYYWCCTCW---
---AAAACCTCAAAT
A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCTCYYWCCTCW
NNACTTACCTN-
A T C G G A T C A C G T A G T C A G T C A G C T C G A T A T G C A G T C C G A T A G T C C G A T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T