Information for 1-CGGATATGAT (Motif 2)

A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T C G T A A C G T A G T C A G T C A C T G
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets194.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGGATATGAT
ACCCGGATGTA--
A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGGATATGAT
AAGGATATNTN
A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGATATGAT
DCCGGAARYN--
A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T

ETS1/MA0098.3/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGGATATGAT
ACCGGAAGTG--
A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
C T G A T A G C T G A C A T C G A C T G C G T A C G T A T C A G A G C T T C A G A C G T A C G T

ERG/MA0474.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGGATATGAT
ACCGGAAGTG--
A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
C G T A T G A C T G A C C T A G A C T G G T C A G C T A T C A G A G C T T A C G A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGATATGAT
RCCGGAARYN--
A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T

GATA6/MA1104.2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CGGATATGAT--
NNAGATAAGATAN
A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C T A G C G T A G C A T C G T A C G T A T A C G T C G A C G A T C G T A C G T A

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGGATATGAT-----
NNNNNBAGATAWYATCTVHN
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

ETV3/MA0763.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGATATGAT
ACCGGAAGTG--
A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
T C G A G A T C G A T C A C T G A C T G G T C A C G T A T C A G A G C T T C A G A C G T A C G T

FEV/MA0156.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGGATATGAT
ACCGGAAGTG--
A C G T A C G T A G T C A C T G A C T G C G T A A C G T C G T A A C G T A C T G C G T A A C G T
C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T