Information for 15-TACATACACTGC (Motif 24)

A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A C T G A C G T A C T G A C G T C G T A A C G T C T A G A C G T C G T A
p-value:1e-5
log p-value:-1.207e+01
Information Content per bp:1.898
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets66.6 +/- 60.7bp
Average Position of motif in Background83.8 +/- 52.2bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TACATACACTGC
ATTTGCATACAATGG
A C G T A C G T A C G T A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TACATACACTGC------
-AATCGCACTGCATTCCG
A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZSCAN4/MA1155.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TACATACACTGC---
TGCACACACTGAAAA
A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TACATACACTGC------
--CAATCACTGGCAGAAT
A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

SOX2/MA0143.4/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TACATACACTGC--
---AAACAATGGAA
A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TACATACACTGC
NTTGATACATT--
A C G T A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TACATACACTGC--
---AAACAATGGCA
A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TACATACACTGC
ATGMATATDC---
A C G T A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TACATACACTGC
----CACAATGC
A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C
A C G T A C G T A C G T A C G T T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C

ZSCAN29/MA1602.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TACATACACTGC
CGTCTACACGGG
A C G T T C G A A G T C G T C A A C G T C G T A A G T C C G T A A G T C A C G T A C T G A G T C
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G