Information for 11-TCTAAAGCACAT (Motif 19)

A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.933e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets164.0 +/- 0.0bp
Average Position of motif in Background109.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCTAAAGCACAT-
---AAACCACANN
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

PH0112.1_Nkx2-3/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTAAAGCACAT----
CTTTAAGTACTTAATG
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

MXI1/MA1108.2/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TCTAAAGCACAT---
-----GACACATGGC
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCTAAAGCACAT------
--CGAAGCACACAAAATA
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TCTAAAGCACAT-
---AAACCACAGC
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCTAAAGCACAT
--NAAACCACAG
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T
A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCTAAAGCACAT--
---AAACCACAGAN
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCTAAAGCACAT--
--NWAACCACADNN
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PH0116.1_Nkx2-9/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTAAAGCACAT-----
TTTTAAGTACTTAAATT
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TCTAAAGCACAT---
----AAGGATATNTN
A C G T A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T