Information for 2-CTCTGCAT (Motif 20)

A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T
Reverse Opposite:
C T G A A G C T A C T G A G T C T C G A A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.646e+01
Information Content per bp:1.920
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif7.44%
Number of Background Sequences with motif1092.0
Percentage of Background Sequences with motif2.22%
Average Position of motif in Targets108.4 +/- 55.8bp
Average Position of motif in Background101.3 +/- 59.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CTCTGCAT----
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POU5F1/MA1115.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGCAT--
NATTTGCATNN
A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

POU2F3/MA0627.2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGCAT---
NNATTTGCATATN
A C G T A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T A C G T A C G T
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGCAT-
BTVATTWGCATA
A C G T A C G T A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTCTGCAT-
DCTCAGCAGG
A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTCTGCAT--
ATTTGCATAA
A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T A C G T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCAT
VCCTCTCTGDDY
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTCTGCAT--
TTCATTTGCATAT
A C G T A C G T A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCTGCAT-
GATTTGCATA
A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T A C G T
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGCAT
ATGACTCAGCAD
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G C T A C T G A G T C C T G A A G C T
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T