Information for 6-GTGCAGGCCA (Motif 25)

A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-8.113e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background185.9 +/- 18.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTGCAGGCCA-------
---CAGGCCNNGGCCNN
A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGCAGGCCA
--CTAGGCCT
A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTGCAGGCCA
--CNAGGCCT
A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GTGCAGGCCA
AAGGKGRCGCAGGCA-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGCAGGCCA-
NBYCAAGGTCAC
A C G T A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GTGCAGGCCA-
---AAGGTCAC
A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGCAGGCCA
TGGTACATTCCA
A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTGCAGGCCA
AGGTCAAGGTCA
A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GTGCAGGCCA
----AGGTCA
A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGCAGGCCA
--TRAGGTCA
A C T G A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A