Information for 2-AGCCAGTG (Motif 37)

C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C T G A C T G A G T C A C G T
p-value:1e-2
log p-value:-5.902e+00
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif60.00%
Number of Background Sequences with motif13161.5
Percentage of Background Sequences with motif17.03%
Average Position of motif in Targets148.4 +/- 42.3bp
Average Position of motif in Background99.3 +/- 69.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----AGCCAGTG----
NNNNTGCCAGTGATTG
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AGCCAGTG-
ACTAGCCAATCA
A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAGTG--
NTGGCCAATGAG
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGCCAGTG--
AGCCAATCGG
C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGTG
CGTGCCAAG-
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGTG
CAGCC----
A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGCCAGTG-----
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGTG
AGAGGAAGTG
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

ELF1/MA0473.3/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCCAGTG--
AAACAGGAAGTGGG
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G A C G T A C G T
C T G A C T G A T G C A T A G C T G C A A T C G C T A G T G C A C G T A T C A G C G A T T C A G T C A G T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAGTG
BCAGACWA--
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C G T A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T