Information for 20-GCACCCTACAAG (Motif 22)

A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C T G A C G T A C T G A G T C
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCFL/MA1102.2/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACCCTACAAG
GCGCCCCCTGNN--
A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G
T A C G A G T C C T A G G T A C T A G C T A G C A G T C T A G C A C G T T A C G A T G C A G C T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCACCCTACAAG
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GCACCCTACAAG
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

SOX12/MA1561.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCACCCTACAAG-
--ACCGAACAATG
A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T
A C G T A C G T G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCACCCTACAAG
ATCACCCCAC---
A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCACCCTACAAG-
-GNCTATAAAAGG
A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T
A C G T A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCACCCTACAAG
CNGTCACGCCAC---
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GCACCCTACAAG-
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0161.1_Rxra_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCACCCTACAAG-
NNNNCAACCTTCGNGA
A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GCACCCTACAAG---
---CCATATATGGNA
A C T G A G T C C G T A A G T C A G T C A G T C A C G T C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A