Information for 2-TGAGGGACTG (Motif 7)

C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G
Reverse Opposite:
A G T C C G T A A T C G A G C T G A T C G T A C A G T C G A C T G T A C G T C A
p-value:1e-8
log p-value:-1.987e+01
Information Content per bp:1.828
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif246.0
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets99.2 +/- 53.0bp
Average Position of motif in Background96.5 +/- 58.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX3/MA1114.1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TGAGGGACTG----
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TGAGGGACTG---
TTTGAGTGACAGCTA
A C G T A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TGAGGGACTG--
TGAGTGACAGSC
C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGGACTG-
NTGATTGACAGN
A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGGACTG-
BTGABTGACAGS
A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGAGGGACTG
AGAGGAAGTG
C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGAGGGACTG
CTTGAGTGGCT-
A C G T A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

SPIB/MA0081.2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGGACTG---
NAAAGAGGAAGTGANA
A C G T A C G T A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T A C G T A C G T
T C G A C T G A C T G A C G T A T C A G T C G A C T A G C T A G T G C A C G T A T A C G G C A T T A C G T C G A C T G A C T G A

SPI1/MA0080.5/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGAGGGACTG-----
AAAAAAGAGGAAGTGAAAAA
A C G T A C G T A C G T A C G T A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C T G A C T G A C G T A T C A G C T G A C T A G C T A G T C G A C G T A T C A G C G A T T A C G T C G A C T G A C T G A C T G A C G T A

PB0114.1_Egr1_2/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TGAGGGACTG-
TGCGGAGTGGGACTGG
A C G T A C G T A C G T A C G T A C G T C A G T A C T G C T G A C T A G A C T G C T A G C T G A T A G C C G A T C T A G A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G