Information for 1-TTGTTCGGGG (Motif 1)

A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C T G C G T A C G T A A G T C C G T A C G T A
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets146.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX12/MA1561.1/Jaspar

Match Rank:1
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTCGGGG
NATTGTTCGGT-
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:2
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTCGGGG
CATTGTTCGG--
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G A C G T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TTGTTCGGGG
CCATTGTTCT---
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGTTCGGGG
ATTGTT-----
A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGTTCGGGG---
-TGTCAGGGGGCG
A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTGTTCGGGG
NCCATTGTTC----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TTGTTCGGGG-
AATCAATTGTTCCGCTA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

SOX4/MA0867.2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTCGGGG
NCCTTTGTTC----
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGTTCGGGG
CCATTGTTNY---
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGTTCGGGG
YCTTTGTTCC---
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A G T C A C T G A C T G A C T G A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T