Information for 21-TTAGTCTCCG (Motif 39)

A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G C G T A A C T G C G T A A G T C A C G T C G T A C G T A
p-value:1e-3
log p-value:-7.225e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif9.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets6.0 +/- 0.0bp
Average Position of motif in Background111.4 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTCTCCG-
NNAATTAGTCACGGT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTAGTCTCCG
-TWGTCTGV-
A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PH0123.1_Obox3/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTCTCCG---
ATAGTTAATCCCCCNNA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TTAGTCTCCG
----GCTCCG
A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGTCTCCG--
NANANTTAATCCCNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTCTCCG---
NTAGTTAATCCCCTTAN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

IRF6/MA1509.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTAGTCTCCG-
--AGTTTCGGT
A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A C G T
A C G T A C G T C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTAGTCTCCG
RGTTAGTGCCCY
A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTAGTCTCCG----
AGTATTCTCGGTTGC
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

PH0122.1_Obox2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTAGTCTCCG---
ATAGTTAATCCCCCTCA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C G T A G T C A G T C A C T G A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A