Information for 16-GTTTAGCACC (Motif 31)

A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A G T C A C G T C G T A C G T A C G T A A G T C
p-value:1e-3
log p-value:-7.105e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif63.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background115.5 +/- 116.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTAGCACC--
--TTVACACCTH
A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTTTAGCACC-
-ATTAACACCT
A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T
A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTTTAGCACC--
--TTMACACCTT
A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTTAGCACC--
-TTTCACACCTN
A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTTAGCACC-
-TTTCACACCT
A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GTTTAGCACC-----
NNTTTTCACACCTTNNN
A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTTTAGCACC-
-TTTCACACCT
A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTTTAGCACC-
CTGTCTGTCACCT
A C G T A C G T A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTAGCACC-
TGTCTGDCACCT
A C G T A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

TBX6/MA1567.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTTTAGCACC--
--TTCACACCTN
A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A C G T G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C