Information for 5-CTTAGTAGTGGT (Motif 5)

A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A A G T C A C G T C G T A A G T C A C G T C G T A C G T A A C T G
p-value:1e-15
log p-value:-3.679e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets103.3 +/- 33.5bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0027.1_Emx2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTTAGTAGTGGT-
ACCACTAATTAGTGGAC
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTAGTAGTGGT------
-NNANTGGTGGTCTTNNN
A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTAGTAGTGGT
CTTTGATGTGSB
A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CTTAGTAGTGGT
GCACAYAGTAGGKCY
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

PH0098.1_Lhx8/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTTAGTAGTGGT-
ACCCCTAATTAGCGGTG
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PH0034.1_Gbx2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTTAGTAGTGGT-
AGCGCTAATTAGCGATT
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

PH0031.1_Evx1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CTTAGTAGTGGT-
AGAACTAATTAGTGGAC
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
G C T A T C A G G C T A T C G A A T G C G A C T G T C A G T C A A C G T A C G T C T G A T A C G A G C T A T C G T A C G C G T A T A G C

PH0032.1_Evx2/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----CTTAGTAGTGGT-
ANCGCTAATTAGCGGTN
A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
C G T A T G A C T G A C T A C G T A G C A G C T T G C A C G T A A C G T A C G T C T G A T A C G A G T C C A T G C T A G A C G T T C A G

PH0039.1_Mnx1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTTAGTAGTGGT-
GTACTAATTAGTGGCG
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T A C G T
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGTAGTGGT
NNAATTAGTCACGGT
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T C G T A A C T G A C G T A C T G A C T G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T