| p-value: | 1e-2 |
| log p-value: | -6.461e+00 |
| Information Content per bp: | 1.762 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 1.65% |
| Number of Background Sequences with motif | 165.2 |
| Percentage of Background Sequences with motif | 0.34% |
| Average Position of motif in Targets | 95.9 +/- 61.3bp |
| Average Position of motif in Background | 97.2 +/- 53.2bp |
| Strand Bias (log2 ratio + to - strand density) | 3.8 |
| Multiplicity (# of sites on avg that occur together) | 2.50 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 1 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AAAAACCCTAAA--- ---NGYCATAAAWCH |
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PH0064.1_Hoxb9/Jaspar
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAAACCCTAAA----- -AGAGCCATAAAATTCG |
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|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AAAAACCCTAAA- ---VGCCATAAAA |
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|
|
ONECUT3/MA0757.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAAAACCCTAAA AAAAAATCAATAAT |
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|
|
PH0047.1_Hoxa11/Jaspar
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAAACCCTAAA---- TAAAGTCGTAAAACAT |
|
|
|
PB0135.1_Hoxa3_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAAACCCTAAA-- AAAAACCATTAAGG |
|
|
|
PH0066.1_Hoxc11/Jaspar
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAAACCCTAAA---- TAAAGTCGTAAAATAG |
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|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | AAAAACCCTAAA- ---KGCCATAAAA |
|
|
|
BARHL2/MA0635.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | 6 |
| Orientation: | forward strand |
| Alignment: | AAAAACCCTAAA---- ------GCTAAACGGT |
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|
|
ONECUT2/MA0756.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AAAAACCCTAAA AAAAAATCGATAAT |
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