Information for 4-TCTAGCCAAA (Motif 13)

C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T C G A T A C T G C A T G G T A C G C A T C G T A A C T G C G T A
p-value:1e-12
log p-value:-2.807e+01
Information Content per bp:1.841
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif208.3
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets72.3 +/- 52.5bp
Average Position of motif in Background99.5 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCTAGCCAAA
CGTCTAGACA--
A C G T A C G T C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCTAGCCAAA
TTTCCCGCCAAA
A C G T A C G T C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCTAGCCAAA
TGTCTAGACA--
A C G T A C G T C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCTAGCCAAA-
TTTTCCCGCCAAAA
A C G T A C G T A C G T C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCTAGCCAAA
-CGTGCCAAG
C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Smad4/MA1153.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCTAGCCAAA
TCTAGACA--
C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TCTAGCCAAA
-BCAGACWA-
C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTAGCCAAA-
-GGTGCCAAGT
C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCTAGCCAAA--
ACTAGCCAATCA
C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTAGCCAAA
CYWSTGGTCARA
A C G T A C G T C G A T A G T C G C A T C G T A A C T G G T A C A G T C C G T A C T G A C G T A
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A