Information for 16-CACTAGTG (Motif 36)

A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T G T C A A C T G A C G T A C T G
p-value:1e-2
log p-value:-4.672e+00
Information Content per bp:1.967
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif152.5
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets107.9 +/- 60.9bp
Average Position of motif in Background104.9 +/- 60.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACTAGTG--
CACGTGTGCH
A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T A C G T
A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACTAGTG-
NTCAAGTGG
A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACTAGTG--
NTCAAGTGGN
A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T A C G T
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CACTAGTG
ATCCATTAGCA
A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CACTAGTG--
CTYRAGTGSY
A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T A C G T
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CACTAGTG---
GANGTTAACTAGTTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CACTAGTG
GTTAACTAGN-
A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CACTAGTG
NHRTCACGACDN
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

PH0111.1_Nkx2-2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CACTAGTG-----
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

POL002.1_INR/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CACTAGTG-
-NNNANTGA
A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C T G A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A