Information for 9-CTGATGTGCG (Motif 27)

A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G
p-value:1e-3
log p-value:-7.436e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background90.4 +/- 75.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic2/MA1629.1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTGATGTGCG
CCCCCTGCTGTGNN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

ZBTB18/MA0698.1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTGATGTGCG
CATCCAGATGTTC-
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CTGATGTGCG
ATTCCAGATGTTT-
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGATGTGCG
CCCCCTGCTGTG--
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CTGATGTGCG-
TNTCCTGCTGTGNNG
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGATGTGCG---
NNNNTTGTGTGCTTNN
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CTGATGTGCG-
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTGATGTGCG
TCCAGATGTT--
A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G
A C G T T G A C A G T C C G T A A T C G G T C A A C G T A T C G A G C T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTGATGTGCG
-TGACGT---
A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G
A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGATGTGCG-
NNTCCTGCTGTGNNN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G A G T C A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C