Information for 7-CGACCAGCCA (Motif 28)

A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C G T A G T C A C T G
p-value:1e-3
log p-value:-9.002e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif18.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets165.0 +/- 0.0bp
Average Position of motif in Background107.7 +/- 73.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:CGACCAGCCA--
GGACCACCCACG
A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

GLI3/MA1491.1/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CGACCAGCCA-----
AGACCACCCACGTCG
A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A A C T G T G C A T G A C T G A C G T C A T A G C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

ZBTB7B/MA0694.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CGACCAGCCA-
GCGACCACCGAA
A C G T A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

GLI2/MA0734.2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CGACCAGCCA-----
AGACCACCCACGTCG
A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CGACCAGCCA--
AGACCACCCASR
A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T
C T G A A C T G T C G A T G A C G A T C G C T A T A G C T G A C G T A C C G T A T A G C T C A G

ZNF341/MA1655.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGACCAGCCA-
GGGAACAGCCAC
A C G T A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGACCAGCCA-
GCGACCACCGAA
A C G T A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CGACCAGCCA-
---BCAGACWA
A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGACCAGCCA
GGAACAGCCG
A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A
C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGACCAGCCA-----
TACGCCCCGCCACTCTG
A C G T A C G T A G T C A C T G C G T A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G