| p-value: | 1e-4 |
| log p-value: | -1.055e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 20.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 143.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TTCATGTATATG- ---ATGMATATDC |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TTCATGTATATG--- CTCATGAATATTCAT |
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PH0087.1_Irx6/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCATGTATATG ANTTNTACATGTANTTN |
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|
PH0082.1_Irx2/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCATGTATATG ANTNTTACATGTATNTA |
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|
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TTCATGTATATG----- --YATGCATATRCATRT |
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|
|
PH0084.1_Irx3_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCATGTATATG NNTATTACATGTANNNT |
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|
|
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | TTCATGTATATG- ---ATGAATATTC |
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|
|
PH0086.1_Irx5/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCATGTATATG ANTNNTACATGTANNTN |
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|
PH0083.1_Irx3_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TTCATGTATATG ANTATTACATGTANNNN |
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PH0085.1_Irx4/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TTCATGTATATG- AATATACATGTAAAACA |
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