Information for 1-GGCAGCTGACGG (Motif 1)

A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C G T A T G C C G T A C A T G A G T C A C G T A C T G A G T C A G T C
p-value:1e-19
log p-value:-4.483e+01
Information Content per bp:1.928
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.5 +/- 37.6bp
Average Position of motif in Background10.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGCAGCTGACGG
DGCAGCTGCYSS
A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

ASCL1/MA1100.2/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGCAGCTGACGG
NGCAGCTGCN--
A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGCAGCTGACGG-
NNNNAGCAGCTGCTGAN
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MYOG/MA0500.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCAGCTGACGG
NNGCAGCTGCNN-
A C G T A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGACGG
AACAGCTGCAG-
A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCAGCTGACGG
NNCAGCTGNN--
A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCTGACGG
NNGGCAGGTGCNN-
A C G T A C G T A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GGCAGCTGACGG
ANCAGCTG----
A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCAGCTGACGG
NNAGCAGCTGCT--
A C G T A C G T A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCAGCTGACGG
VNAVCAGCTGGC--
A C G T A C G T A C T G A C T G A G T C C G T A A C T G G T A C A C G T T A C G C G T A A G T C A C T G A C T G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T