Information for 4-CGACATAT (Motif 35)

A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A A C G T A C T G A C G T A G T C A C T G
p-value:1e-2
log p-value:-5.140e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif51.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background83.2 +/- 76.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2/MA0669.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:CGACATAT---
-GACATATGTT
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

NEUROG1/MA0623.2/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CGACATAT---
-GACATATGTC
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C

Atoh1/MA0461.2/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CGACATAT---
-AACATATGTT
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CGACATAT--
--ACATATGG
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGACATAT---
-NACATATGGN
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

NEUROD2/MA0668.1/Jaspar

Match Rank:6
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CGACATAT---
-GCCATATGGT
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

ATOH7/MA1468.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGACATAT---
-GACATATGTT
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CGACATAT----
NGCCATATGGTG
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CGACATAT---
ATTTACGACAAATAGC
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

BHLHE22/MA0818.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGACATAT---
-ANCATATGGT
A G T C A C T G C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T