Information for 5-TAATAACTATTA (Motif 5)

A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T C G T A C T A G A C G T A C G T C G T A A C G T A C G T C G T A
p-value:1e-13
log p-value:-3.183e+01
Information Content per bp:1.959
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.9 +/- 50.9bp
Average Position of motif in Background152.2 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TAATAACTATTA---
-AAAAACCATTAAGG
A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T A C G T
A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

BARX2/MA1471.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TAATAACTATTA-
-AAAAACCATTAC
A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C

PB0172.1_Sox1_2/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TAATAACTATTA---
NNNTAACAATTATAN
A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T A C G T
A T G C T C A G G T A C A C G T T G C A T G C A A T G C C T G A C T G A G A C T C G A T C T G A G A C T C T G A C A T G

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TAATAACTATTA
NTTNAGAACAATTA
A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAATAACTATTA-
---AAACMATTAN
A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G

PH0061.1_Hoxb6/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TAATAACTATTA
NNNGTAATTACNNATA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A
T C G A G T C A A T C G C A T G A G C T G T C A C G T A C G A T C A G T C T G A T G A C T A G C G T C A G C T A C G A T C G T A

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TAATAACTATTA-
----ACCGATTAG
A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

ZNF652/MA1657.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TAATAACTATTA-
-NTTAACTCTTTN
A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A A C G T
A C G T C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAATAACTATTA--
GCTAATTATAATTATC
A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

MEOX2/MA0706.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAATAACTATTA
NTTAATTACN----
A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A G T C A C G T G T C A A C G T A C G T C G T A
A C T G G C A T G A C T T C G A G T C A C A G T A C G T C T G A A T G C G A C T A C G T A C G T A C G T A C G T