Information for 5-TGTCAGTAATCT (Motif 8)

A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C G T A C G T C G T A A G T C A C G T A C T G C G T A A G T C C G T A
p-value:1e-4
log p-value:-9.590e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets74.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAGTAATCT
NTGTCAN------
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.3/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCAGTAATCT---
AAGTCAGCATTTTTTT
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T
C T G A C G T A T A C G C G A T G T A C C G T A C A T G A G T C C G T A C G A T G C A T G C A T G C A T G C A T G C A T G C A T

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGTCAGTAATCT-
GGAGGTCATTAATTAT
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGTCAGTAATCT-
NCTANGTCAGCAAATTT
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGTCAGTAATCT
NCTGTCAATCAN--
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGTCAGTAATCT
SCTGTCAVTCAV--
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGTCAGTAATCT
NNGCTGTCACTCANN-
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAGTAATCT--
AAGTCAGCANTTTTN
A C G T A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCAGTAATCT
NGTCAGCANTTT
A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

NRL/MA0842.2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCAGTAATCT-
CGTCAGCANTTTT
A C G T A C T G A C G T A G T C C G T A A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T
G A T C T C A G A G C T G T A C C T G A A C T G A G T C C T G A G A T C C G A T G C A T G C A T G A C T