Information for 17-GTTTTTTAAGAC (Motif 20)

A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C G T C G T A C G T A C G T A C G T A C G T A C G T A A G T C
p-value:1e-3
log p-value:-8.761e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets182.0 +/- 0.0bp
Average Position of motif in Background93.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD10/MA1506.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC-
--NTTTTACGACC
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T
A C G T A C G T C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

HOXC9/MA0485.2/Jaspar

Match Rank:2
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC
--NTTTTACGAC
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C
A C G T A C G T C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

HOXD12/MA0873.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC-
--NTTTTACGACT
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC
--NTTTTACGAC
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

HOXC12/MA0906.1/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC-
--NTTTTACGACC
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

HOXB9/MA1503.1/Jaspar

Match Rank:6
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC
--NTTTTACGAC
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C
A C G T A C G T C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C

PH0076.1_Hoxd11/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTTAAGAC----
ANNATTTTACGACNTNA
A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

HOXC10/MA0905.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC
--NTTTTACGAC
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GTTTTTTAAGAC-
--NTTTTACGACC
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T
A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTTTTTTAAGAC----
NNNTTTTACGACNTTN
A C T G A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A