Information for 8-TGCGAGGTCTCT (Motif 4)

A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G T A A G T C G T A C A C G T A G T C C T A G A G T C C G T A
p-value:1e-12
log p-value:-2.958e+01
Information Content per bp:1.909
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets147.6 +/- 40.9bp
Average Position of motif in Background137.2 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TGCGAGGTCTCT----
----AGGTCTCTAACC
A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF274/MA1592.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCGAGGTCTCT--
GGTATGAGTTCTCGCT
A C G T A C G T A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGCGAGGTCTCT
YSTGGGTGGTCT--
A C G T A C G T A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGCGAGGTCTCT
GGATTGACAGGTCNTT
A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCGAGGTCTCT
CGTGGGTGGTCC--
A C G T A C G T A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCGAGGTCTCT
TGACAGGTGTCA
A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A

CREM/MA0609.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCGAGGTCTCT--
GCAGTGACGTCACTGC
A C G T A C G T A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
T A C G T G A C C T G A T C A G G A C T A T C G C T G A A G T C T C A G G A C T T A G C C T G A A G T C G A C T A C T G A T G C

GLI3/MA1491.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGAGGTCTCT
CGNCGTGGGTGGTCN--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGCGAGGTCTCT
---AAGGTCAC-
A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TGCGAGGTCTCT
--CNAGGCCT--
A C G T A C T G A G T C T A C G C G T A A C T G A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T