| p-value: | 1e-2 |
| log p-value: | -6.750e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 11.5 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 141.0 +/- 0.0bp |
| Average Position of motif in Background | 88.1 +/- 86.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TCCTAATAAG-- --CTAATTAGCN |
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PH0089.1_Isx/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCCTAATAAG---- ACTCCTAATTAGTCGT |
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PAX4/MA0068.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TCCTAATAAG --CTAATTAG |
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|
|
PH0098.1_Lhx8/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TCCTAATAAG----- ACCCCTAATTAGCGGTG |
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|
|
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCCTAATAAG--- -CCATATATGGNA |
|
|
|
NOTO/MA0710.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCCTAATAAG- -NNTAATTAGN |
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|
|
LHX6/MA0658.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TCCTAATAAG- -ACTAATTAGC |
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|
|
HOXA2/MA0900.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | TCCTAATAAG --NTAATTAN |
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|
|
LBX1/MA0618.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TCCTAATAAG --TTAATTAG |
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|
|
EVX2/MA0888.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TCCTAATAAG- -NNTAATTANN |
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