Information for 11-CTGAGTGAGAGC (Motif 16)

A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A C G T A G T C C G T A A G T C A C G T A G T C C G T A A C T G
p-value:1e-4
log p-value:-9.297e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background189.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX1/MA0782.2/Jaspar

Match Rank:1
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTGAGTGAGAGC--
TTTGAGTGACAGCTA
A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:CTGAGTGAGAGC-
-TGAGTGACAGSC
A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PBX3/MA1114.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CTGAGTGAGAGC---
GGGTGAGTGACAGGCGG
A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGAGAGC
NTGATTGACAGN
A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGAGAGC
BTGABTGACAGS
A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MAFK/MA0496.3/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGTGAGAGC
NNTGCTGAGTCAGCN-
A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
C G T A C G A T C A G T A T C G T G A C G C A T C A T G C G T A T A C G A C G T T G A C C G T A A C T G A T G C C G T A A C G T

BACH1/MA1633.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTGAGTGAGAGC
NTGCTGAGTCATN--
A C G T A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
C G A T C G A T A T C G T G A C G A C T C A T G G C T A A T C G A C G T T G A C T C G A A G C T T A G C A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGAGTGAGAGC
TGCTGAGTCA----
A C G T A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGAGAGC
VTGYGKGGGAGK
A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G

BATF::JUN/MA0462.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGTGAGAGC
NATGAGTCATN--
A C G T A G T C A C G T A C T G C G T A A C T G A C G T A C T G C G T A A C T G C G T A A C T G A G T C
C G A T G T C A G C A T C A T G G C T A A T C G G A C T G T A C C G T A A C G T G C T A A C G T A C G T