Information for 1-AAAAGACATC (Motif 4)

C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A C G A T A C T G A C G T A G T C A C G T A G C T A C G T A C G T
p-value:1e-5
log p-value:-1.238e+01
Information Content per bp:1.921
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif216.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets127.2 +/- 39.4bp
Average Position of motif in Background103.4 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAAAGACATC-----
GACAGAGATATCAGTGT
A C G T A C G T C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

CREB1/MA0018.4/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAAGACATC----
-NATGACATCANNN
C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

Nr2e1/MA0676.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAAGACATC
AAAAGTCAA-
C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAAAGACATC---
AGAAATGACTTCCCT
A C G T A C G T C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAAAGACATC---
-CAAGACGCCTTA
C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

ATF2/MA1632.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAAGACATC----
-NATGACNTCATNN
C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T

JUN/MA0488.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAAAGACATC-----
--ATGACATCATCNN
C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------AAAAGACATC
TTCAAAWTAAAAGTC---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAAGACATC--
-AAGGATATNTN
C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAAAGACATC-----
ATAAATGACACCTATCA
A C G T A C G T C G T A G T C A C T G A C G T A A C T G C G T A A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A