Information for 11-GCTGAGAGAAAA (Motif 15)

A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A G T C C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.165e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets68.3 +/- 44.0bp
Average Position of motif in Background72.2 +/- 52.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTGAGAGAAAA--
---NAGAGAAAGNA
A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGAGAAAA------
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAGAGAAAA------
NNCCTGNAAAAAAAAAAAAA
A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCTGAGAGAAAA
TGCTGACTCA---
A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTGAGAGAAAA-----
GTTAAAAAAAAAAATTA
A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGAGAAAA
GGTGYTGACAGS---
A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTGAGAGAAAA
CCTGCTGAGH-----
A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.3/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCTGAGAGAAAA
NNTGCTGAGTCAGCN
A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A
C G T A C G A T C A G T A T C G T G A C G C A T C A T G C G T A T A C G A C G T T G A C C G T A A C T G A T G C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTGAGAGAAAA
AGGTGNCAGACAG
A C G T A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCTGAGAGAAAA--
----AGATAAGANN
A C T G A G T C A C G T A C T G C G T A A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C