Information for 5-GTAGTTGG (Motif 17)

A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G
Reverse Opposite:
A G T C A G T C C G T A G T C A A G T C A C G T C G T A A G T C
p-value:1e-3
log p-value:-6.951e+00
Information Content per bp:1.916
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1473.4
Percentage of Background Sequences with motif3.04%
Average Position of motif in Targets115.7 +/- 46.6bp
Average Position of motif in Background98.8 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GTAGTTGG---
CACGGCAGTTGGTNN
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GTAGTTGG---
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTAGTTGG
ATAGTAGGTG-
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G A C G T

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTTGG--
NNTAATTGGNN
A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G A C G T A C G T
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T

MSX2/MA0708.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTAGTTGG
NTAATTGG
A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTAGTTGG----
TCGCGAAGGTTGTACT
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

MYB/MA0100.3/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTTGG-
NNCAGTTGNN
A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G A C G T
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T

GBX1/MA0889.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GTAGTTGG-
GCTAATTAGN
A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G A C G T
T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTAGTTGG
TGGCAGTTGG
A C G T A C G T A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAGTTGG
NTAATTGG
A C T G A C G T C G T A A C T G A C G T A C G T C T A G C T A G
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G