Information for 2-GCTGCGCTCC (Motif 10)

A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A G T C A C T G A G T C C G T A A C T G A G T C
p-value:1e-3
log p-value:-9.053e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background189.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.68
Offset:5
Orientation:forward strand
Alignment:GCTGCGCTCC-
-----GCTCCG
A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

NHLH2/MA1529.1/Jaspar

Match Rank:2
Score:0.63
Offset:-8
Orientation:forward strand
Alignment:--------GCTGCGCTCC
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCTCC
NNTCCTGCTGTGNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCTGCGCTCC-
GGCCCCGCCCCC
A C G T A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C A C G T
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCTGCGCTCC--
GCTCCGCCCMCY
A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTGCGCTCC
CGCAGCTGCG----
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTGCGCTCC-
-CNGTCCTCCC
A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCTGCGCTCC
GCTGTG----
A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCTGCGCTCC
NGCTN------
A C G T A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCTGCGCTCC---
NCGACCGCTCCGCTCGAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G A G T C A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A