Information for 5-GATAGCGTGA (Motif 9)

C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A T G C A C T G G T A C A C G T C G T A A C G T A G T C
p-value:1e-8
log p-value:-1.942e+01
Information Content per bp:1.872
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif34.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets77.0 +/- 59.6bp
Average Position of motif in Background84.7 +/- 62.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)2.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GATAGCGTGA--
--TTGCGTGCVA
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GATAGCGTGA
---TGCGTG-
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GATAGCGTGA-
-ATGGGGTGAT
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T
A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

PAX5/MA0014.3/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GATAGCGTGA----
--GAGCGTGACCCC
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

SREBF1/MA0595.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GATAGCGTGA-
-GTGGGGTGAT
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T
A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

SREBF2/MA0596.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GATAGCGTGA-
-ATGGGGTGAT
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATAGCGTGA---
-GTGGCGTGACNG
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATAGCGTGA---
-NHGTCGTGAYDN
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T C T A G G T C A C A T G A C G T A T G C T C A G C A G T A C T G G T C A A G T C C G A T A G T C

PB0127.1_Gata6_2/Jaspar

Match Rank:9
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------GATAGCGTGA-
NGCTGCGATATCGNCGC
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GATAGCGTGA--
----NCGTGACN
C T A G G T C A A C G T C G T A A C T G A G T C A T C G A C G T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T