Information for 17-AACTGCGC (Motif 35)

T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C
Reverse Opposite:
A T C G A T G C C T A G A T G C C T G A A C T G A C G T A G C T
p-value:1e-3
log p-value:-8.775e+00
Information Content per bp:1.776
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif588.0
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets92.2 +/- 53.0bp
Average Position of motif in Background103.8 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF3/MA0522.3/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AACTGCGC
CGCACCTGCCC
A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

MYB/MA0100.3/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AACTGCGC
ACCAACTGTC-
A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AACTGCGC
CGCACCTGCCG
A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------AACTGCGC--
NNNNCAACCTTCGNGA
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C A C G T A C G T
G T C A C A T G G C A T C T G A A G T C T C G A T G C A T G A C G A T C C G A T C G A T A G T C C A T G A G T C A C T G G T C A

ZEB1/MA0103.3/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AACTGCGC
CCCACCTGCGC
A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C
A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AACTGCGC
CGCAGCTGCG-
A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AACTGCGC---
NNGCNCTGCGCGGC
A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C A C G T A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AACTGCGC
SNGCACCTGCHS
A C G T A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

NHLH2/MA1529.1/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------AACTGCGC---
GGGCCGCAGCTGCGTCCC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C A C G T A C G T A C G T
C T A G C A T G C T A G G A T C T G A C C A T G A G T C C T G A A T C G T A G C A G C T A T C G G A T C C A T G A G C T G T A C G T A C G A T C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AACTGCGC-
CAGCACCTGCCCC
A C G T A C G T A C G T A C G T T C G A G T C A T G A C A G C T T A C G A G T C A T C G A T G C A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C