Information for 11-AAGGCTAC (Motif 33)

C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G G T A C A G T C A C G T A G C T
p-value:1e-4
log p-value:-9.802e+00
Information Content per bp:1.934
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif174.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets91.2 +/- 57.4bp
Average Position of motif in Background98.9 +/- 57.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTAC-------
ACATGCTACCTAATAC
A C G T C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTAC-
CAAGGHCANV
A C G T C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGGCTAC
AAGGTCAC
C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAGGCTAC----
--TGCTACTGTT
C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCTAC-------
CNNNGCTACTGTANNN
A C G T C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGGCTAC
TWGTCTGV
C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0155.1_Osr2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTAC-------
ACTTGCTACCTACACC
A C G T C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

NR5A1/MA1540.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGGCTAC
GTCAAGGTCAC
A C G T A C G T A C G T C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C
A C T G G A C T A T G C C T G A C G T A A C T G A C T G G A C T A G T C C T G A G A T C

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGGCTAC
NBYCAAGGTCAC
A C G T A C G T A C G T A C G T C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGGCTAC---
AAGGATATNTN
C T G A C G T A A C T G A C T G A G T C A C G T C G T A A G T C A C G T A C G T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T