Information for 12-CCAAGATTACCT (Motif 23)

A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T C G T A C G T A A C G T A G T C A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.960e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DPRX/MA1480.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCAAGATTACCT
--NGGATTATCT
A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
A C G T A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAAGATTACCT
--RGGATTAR--
A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCAAGATTACCT
GTCAACCAAGAATTC--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCAAGATTACCT
---GGATTAGC-
A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCAAGATTACCT
-CAAGCTT----
A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAAGATTACCT
-VRGGATTARN-
A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

GATA1/MA0035.4/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAAGATTACCT
-NNAGATTAGAN
A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGATTACCT
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGATTACCT
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCAAGATTACCT
TTGCCCGGATTAGG-
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C T G C G T A A C G T A C G T C G T A A G T C A G T C A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T