Information for 14-CGTATTTCTTTA (Motif 19)

A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C T G C G T A C G T A C G T A A C G T C G T A A G T C A C T G
p-value:1e-4
log p-value:-9.297e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj3/MA0851.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTATTTCTTTA------
-NNNTTTGTTTACNTTNN
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTATTTCTTTA------
-NNNTTTGTTTACNTTNN
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTATTTCTTTA----
NNNNTTTGTTTACNNT
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

ZNF384/MA1125.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTATTTCTTTA--
--TTTTTTTTTANN
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

PB0106.1_Arid5a_2/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CGTATTTCTTTA
TNNTTTCGTATTNNANN-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G A C G T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTATTTCTTTA--
--TGTTTAYTTAGC
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A C G T C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTATTTCTTTA------
-NNNTTTGTTTACTTTTN
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTATTTCTTTA------
-NNNTTTGTTTACATTTN
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

FOXE1/MA1487.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTATTTCTTTA---
NTTGTTTATTTAAGG
A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C T G A G C A T A G C T A C T G A C G T A C G T A C G T C T G A A G C T G C A T A G C T C G T A T C G A A C T G T A C G

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGTATTTCTTTA---
NNNNTTTTTTTTTNAAC
A C G T A C G T A G T C A C T G A C G T C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T C G T A A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C