Information for 9-TTGTGTTTTTGG (Motif 9)

A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G C T A C G T A C G T A C G T A C T G A G A T C C G T A A G T C C G T A T C G A
p-value:1e-11
log p-value:-2.748e+01
Information Content per bp:1.804
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.3 +/- 63.3bp
Average Position of motif in Background95.5 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13/MA0909.2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTGTGTTTTTGG-
--GTTTTATTGGG
A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G A C G T
A C G T A C G T A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

HOXA13/MA0650.2/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TTGTGTTTTTGG-
--GTTTTATTGGN
A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G A C G T
A C G T A C G T C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGTGTTTTTGG---
TTCTATTTTTAGNNN
A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

HOXB13/MA0901.2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTGTGTTTTTGG--
NNATTTTATTGGNN
A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

MEF2A/MA0052.4/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGTTTTTGG--
NNTCTATTTTTAGNN
A C G T A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTGTGTTTTTGG-
-GCTATTTTTGGM
A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTGTGTTTTTGG-
-KCTATTTTTRGH
A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TTGTGTTTTTGG
-TGTGGATTNNN
A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGTTTTTGG
NNTGTGGTTT---
A C G T A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGTGTTTTTGG
NNTGTGGATTSS-
A C G T A C G T C G A T A C T G A C G T C A T G A G C T C G A T C G A T A C G T C A G T A C T G A C T G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T