Information for 17-AGTCCATATATG (Motif 23)

C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C T G C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.771e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets137.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:AGTCCATATATG----
TGNCCATATATGGTCA
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AGTCCATATATG-
-TNCCATATATGG
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T
A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

PB0078.1_Srf_1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGTCCATATATG---
-TTCCATATATGGAA
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T
A C G T G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

MF0008.1_MADS_class/Jaspar

Match Rank:4
Score:0.70
Offset:3
Orientation:forward strand
Alignment:AGTCCATATATG-
---CCATATATGG
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Twist2/MA0633.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGTCCATATATG
--ACCATATGTT
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGTCCATATATG
---CCATATGT-
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AGTCCATATATG
GGCAAAAGTCCAATAA--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGTCCATATATG
RRTCAATA----
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGTCCATATATG
TCCAAAGTCCAAA----
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T A C G T A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGTCCATATATG-----
ATGGGATATATCCGCCT
C G T A A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T