Information for 7-CGAGAAAATA (Motif 28)

A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G
p-value:1e-3
log p-value:-7.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background73.0 +/- 87.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CGAGAAAATA
NAGAGAAAGNA
A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGAGAAAATA
TACTGGAAAAAAAA
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CGAGAAAATA
TTCGCGCGAAAA--
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CGAGAAAATA
GNNACCGAGAATNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0186.1_Tcf3_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGAGAAAATA--
AGCCGAAAAAAAAAT
A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0139.1_Irf5_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CGAGAAAATA
TTGACCGAGAATTCC
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0032.1_IRC900814_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGAGAAAATA-
ATTTACGACAAATAGC
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

HOXB13/MA0901.2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CGAGAAAATA-
AACCAATAAAATTT
A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A A C G T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGAGAAAATA
WAAGTAAAYA
A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGAGAAAATA
TGGCGGGAAAHB-
A C G T A C G T A C G T A G T C A C T G C G T A A C T G C G T A C G T A C G T A C G T A A C G T C G T A
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T