Information for 2-TCTCTCTC (Motif 10)

A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C
Reverse Opposite:
A C T G C G T A A C T G C G T A A T C G C G T A A C T G C G T A
p-value:1e-4
log p-value:-9.619e+00
Information Content per bp:1.924
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif46.15%
Number of Background Sequences with motif4340.5
Percentage of Background Sequences with motif6.20%
Average Position of motif in Targets77.7 +/- 38.9bp
Average Position of motif in Background99.9 +/- 83.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC--
TTCTTTCTCTT
A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC------
ACCACTCTCGGTCAC
A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCTCTCTC--
CTGTCTGTCACCT
A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTCTC--
TGTCTGDCACCT
A C G T A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TCTCTCTC--
NNAATTCTCGNTNAN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTCTC---
VCCTCTCTGDDY
A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Stat2/MA1623.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCTCTCTC-
NNTTTCTGTTTCT
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T
C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTCTCTC--
GTCTGTTTCTA
A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTCTCTC----
NNAGTCCCACTCNNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCTCTCTC----
ACTTTCACTTTC
A C G T A G T C A C G T A T G C A C G T A G T C C G A T G T A C A C G T A C G T A C G T A C G T
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C