| p-value: | 1e-2 |
| log p-value: | -6.793e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 30.2 |
| Percentage of Background Sequences with motif | 0.02% |
| Average Position of motif in Targets | 195.0 +/- 0.0bp |
| Average Position of motif in Background | 117.8 +/- 141.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0067.1_Hoxc12/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGGGTAGTAA------ TTAGGTCGTAAAATTTC |
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HOXC12/MA0906.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TGGGTAGTAA--- --GGTCGTAAAAA |
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|
HOXD10/MA1506.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TGGGTAGTAA--- --GGTCGTAAAAC |
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PH0077.1_Hoxd12/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGGGTAGTAA------ CAAGGTCGTAAAATCTT |
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|
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGGGTAGTAA CGTGGGTGGTCC |
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|
|
HOXC11/MA0651.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TGGGTAGTAA--- --GGTCGTAAAAT |
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|
|
PH0012.1_Cdx1/Jaspar
| Match Rank: | 7 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGGGTAGTAA----- TAAGGTAATAAAATTA |
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|
|
PH0076.1_Hoxd11/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TGGGTAGTAA------ TAAGGTCGTAAAATCCT |
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|
|
RBPJ/MA1116.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGGGTAGTAA CCTGGGAAAG-- |
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|
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Hoxa11/MA0911.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TGGGTAGTAA---- --GGTCGTAAAATT |
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