| p-value: | 1e-2 |
| log p-value: | -5.493e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 14.29% |
| Number of Background Sequences with motif | 65.9 |
| Percentage of Background Sequences with motif | 0.06% |
| Average Position of motif in Targets | 124.0 +/- 0.0bp |
| Average Position of motif in Background | 103.0 +/- 67.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NKX6-3/MA1530.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAATGTCG TTTAATGAN- |
|
|
|
HOXD8/MA0910.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATGTCG GTAATTGC- |
|
|
|
HOXB8/MA1502.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATGTCG NTAATTGC- |
|
|
|
HOXA4/MA1496.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATGTCG NTAATGAC- |
|
|
|
HOXA7/MA1498.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATGTCG GTAATTGC- |
|
|
|
HOXB6/MA1500.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TAATGTCG TTAATTAC- |
|
|
|
HOXC4/MA1504.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATGTCG NTAATGAN- |
|
|
|
GSX2/MA0893.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATGTCG CTAATTAC- |
|
|
|
HOXB4/MA1499.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.67 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAATGTCG NTAATGAT- |
|
|
|
Isl1/MA1608.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TAATGTCG NNCTAATGGNN |
|
|
|