| p-value: | 1e-3 |
| log p-value: | -8.928e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 170.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer
| Match Rank: | 1 |
| Score: | 0.78 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCCTTGACCTCA TGACCTTGACCT-- |
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|
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
| Match Rank: | 2 |
| Score: | 0.77 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GCCTTGACCTCA TGACCTTGACCT-- |
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|
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
| Match Rank: | 3 |
| Score: | 0.75 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GCCTTGACCTCA ----TGACCTYA |
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|
|
ZNF135/MA1587.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.72 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GCCTTGACCTCA--- -CCTCGACCTCCTGA |
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|
|
PB0057.1_Rxra_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GCCTTGACCTCA---- TGTCGTGACCCCTTAAT |
|
|
|
Nr5a2/MA0505.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.70 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GCCTTGACCTCA GCTGACCTTGAACTN- |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GCCTTGACCTCA ----TGACCYCT |
|
|
|
ATF2/MA1632.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.69 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GCCTTGACCTCA--- --NATGACNTCATNN |
|
|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.69 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GCCTTGACCTCA ---NTGACCTCN |
|
|
|
EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | GCCTTGACCTCA---- ----TGACCYYTGVYN |
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