Information for 5-TTAGACTG (Motif 45)

A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A G T C A C G T C G T A C G T A
p-value:1e-1
log p-value:-3.741e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif13244.2
Percentage of Background Sequences with motif13.49%
Average Position of motif in Targets126.0 +/- 32.8bp
Average Position of motif in Background99.4 +/- 89.4bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTAGACTG
BCAGACWA
A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

POL002.1_INR/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTAGACTG-
-NNNANTGA
A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTAGACTG-----
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Smad4/MA1153.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTAGACTG
TCTAGACA-
A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTAGACTG
CCAGACAG
A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

NKX2-5/MA0063.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTAGACTG--
NNTTGAGTGNN
A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

MYBL2/MA0777.1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----TTAGACTG--
AACCGTTAAACGGTC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T
C T G A C T G A T G A C T A G C C T A G C A G T A G C T C G T A T G C A G C T A T G A C A T C G A T C G G A C T G A T C

ZSCAN29/MA1602.1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGACTG
NCNGTGTAGACG-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTAGACTG----
NNNTTGAGTGGNNN
A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTAGACTG
BCMATTAG----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C G T A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T