Information for 6-CGGTTGTTAT (Motif 13)

A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C T G
p-value:1e-3
log p-value:-8.720e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background176.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTGTTAT----
NCNTTTGTTATTTNN
A C G T A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGGTTGTTAT-----
GTNTTGTTGTGANNT
A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTGTTAT----
NNCGTTGCTATGGNN
A C G T A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTGTTAT----
NCCGTTGCTANGNGN
A C G T A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

RFX1/MA0509.2/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGTTGTTAT----
CTGTTGCTATGGCA
A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGTTGTTAT----
CGGTTGCTATGGCA
A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGGTTGTTAT
CCATTGTTNY
A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0122.1_Foxk1_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CGGTTGTTAT---
NNNTGTTGTTGTTNG
A C G T A C G T A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTTGTTAT--------
NTNNNNNGTTGCTANGGNNCANA
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTGTTAT-----
NNTTTTGTTTTGATNT
A C G T A G T C A C T G A C T G A C G T A C G T A C T G A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T