Information for 14-GGTCATACAC (Motif 25)

A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C
Reverse Opposite:
A C T G A C G T A T C G C G A T C G T A A C G T A C T G C T G A G T A C A G T C
p-value:1e-5
log p-value:-1.247e+01
Information Content per bp:1.884
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif74.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets119.3 +/- 45.8bp
Average Position of motif in Background93.3 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATACAC
NAGGTCATTGA-
A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A A C G T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGTCATACAC---
GAGGTCATTGACCTT
A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A G T C C T G A G C A T A G C T T C A G T G C A G T A C G T A C A G C T A G C T

NR4A2::RXRA/MA1147.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGTCATACAC---
GAGGTCATTGACCCC
A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A G C T A G T C T C G A C G A T A G C T T A C G T G C A G T A C G T A C A G T C A G T C

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATACAC---
AAGGTCANTGACCTT
A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C A C G T A C G T A C G T
C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---GGTCATACAC---
GGAGGTCATTAATTAT
A C G T A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

NR2F6(var.3)/MA1539.1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATACAC---
AAGGTCANTGACCTT
A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C A C G T A C G T A C G T
C T G A T C G A C A T G C A T G A C G T A G T C T C G A T A C G G A C T T C A G T G C A G T A C G T A C A G C T G A C T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATACAC--
NAGGTCANTGACCT
A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGTCATACAC
AGGTCA-----
A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCATACAC
CGAGGTCAC----
A C G T A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGTCATACAC---
TAAGGTAATAAAATTA
A C G T A C G T A C G T A C T G A C T G A G C T A G T C C G T A A C G T C G T A A T G C C G T A A G T C A C G T A C G T A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A