Information for 3-GTATTAGA (Motif 17)

A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T C G T A C G T A A C G T C G T A A G T C
p-value:1e-4
log p-value:-9.266e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif393.0
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets66.7 +/- 38.4bp
Average Position of motif in Background102.2 +/- 76.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--GTATTAGA-----
CCGTATTATAAACAA
A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

OTX2/MA0712.2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GTATTAGA-
AAGGGATTAGAA
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

GSC2/MA0891.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTATTAGA
GNGGATTAGN
A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

GSC/MA0648.1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTATTAGA
NNGGATTAGN
A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

PITX1/MA0682.2/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTATTAGA
NGGATTAN-
A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:6
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------GTATTAGA--
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTATTAGA
RGGATTAR-
A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T

PITX2/MA1547.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTATTAGA
GGGATTAN-
A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTATTAGA
NGGGATTA--
A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTATTAGA
GGATTAGC
A C T G A C G T C G T A A C G T A C G T C G T A A C T G C G T A
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C