Information for 21-GTCACAAGTT (Motif 37)

A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A C G T A C T G A C G T A C T G C G T A A G T C
p-value:1e-2
log p-value:-6.804e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif35.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets191.0 +/- 0.0bp
Average Position of motif in Background109.7 +/- 100.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTCACAAGTT
GTCACATGAY
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTCACAAGTT---
AAGGTCAAAAGGTCAA
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTCACAAGTT
GTCACGTGGT
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T
T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T

Rarb/MA0857.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GTCACAAGTT--
AAAGGTCAAAAGGTCA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

TFE3/MA0831.2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCACAAGTT
GTCACGTG--
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T
T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T A C G T

USF2/MA0526.3/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GTCACAAGTT--
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

RARA/MA0729.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTCACAAGTT-----
GAGGTCAAAAGGTCAATG
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

USF1/MA0093.3/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCACAAGTT--
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTCACAAGTT
-TCACACCT-
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCACAAGTT
TTCACACCTT
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C G T
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T