| p-value: | 1e-3 |
| log p-value: | -7.942e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 5.88% |
| Number of Background Sequences with motif | 1.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 25.0 +/- 0.0bp |
| Average Position of motif in Background | 74.1 +/- 38.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RFX3/MA0798.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.74 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TGCTATGGCG CGGTTGCTATGGCA |
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RFX1/MA0509.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.73 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TGCTATGGCG CTGTTGCTATGGCA |
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YY2/MA0748.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TGCTATGGCG--- --AGATGGCGGCG |
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PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.69 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TGCTATGGCG NNCGTTGCTATGGNN |
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PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -9 |
| Orientation: | reverse strand |
| Alignment: | ---------TGCTATGGCG---- NTNNNNNGTTGCTANGGNNCANA |
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PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----TGCTATGGCG NCCGTTGCTANGNGN |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TGCTATGGCG- NGTTGCCATGGCAA |
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Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----TGCTATGGCG CTGTTGCTAGGS-- |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TGCTATGGCG- GGTTGCCATGGCAA |
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Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---TGCTATGGCG-- KGTTGCCATGGCAAC |
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