Information for 6-AATAGCAGACAA (Motif 6)

C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C A C G T C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.696e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif70.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets98.0 +/- 59.0bp
Average Position of motif in Background89.6 +/- 70.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF317/MA1593.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AATAGCAGACAA
TAACAGCAGACT-
A C G T C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:AATAGCAGACAA
----BCAGACWA
C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AATAGCAGACAA----
CGAAGCACACAAAATA
C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATAGCAGACAA---
ATTTGCATACAATGG
C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATAGCAGACAA
TAYAAAAGBWGGCAG
A C G T A C G T A C G T C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AATAGCAGACAA--
----CCAGACRSVB
C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AATAGCAGACAA
----CCAGACAG
C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATAGCAGACAA----
CAAATCCAGACATCACA
A C G T C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATAGCAGACAA---
AACTAGCTGTCAATAC
A C G T C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATAGCAGACAA
-ATGCCAGACN-
C G T A C G T A A C G T C G T A A C T G A G T C C G T A A C T G C G T A A G T C C G T A C G T A
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T