Information for 13-AGCTTATTGG (Motif 23)

C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T C G T A C G T A A C T G A G T C A C G T
p-value:1e-7
log p-value:-1.789e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets87.3 +/- 59.5bp
Average Position of motif in Background122.4 +/- 50.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.3/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AGCTTATTGG--
-NCTGATTGGNN
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGCTTATTGG--
-NCTGATTGGNN
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AGCTTATTGG--
--CCGATTGGCT
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

EN2/MA0642.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGCTTATTGG-
-GNTAATTGGN
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G

HOXB13/MA0901.2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGCTTATTGG--
NNATTTTATTGGNN
A C G T A C G T C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

POL004.1_CCAAT-box/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGCTTATTGG-----
---TGATTGGCTANN
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

GBX1/MA0889.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCTTATTGG-
-GCTAATTAGN
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

HOXA13/MA0650.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCTTATTGG-
GTTTTATTGGN
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G

PH0107.1_Msx2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGCTTATTGG-----
ANCGCTAATTGGTCTNN
A C G T A C G T C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

LBX2/MA0699.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGCTTATTGG-
-NNTAATTGGN
C G T A A C T G A G T C A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T
A C G T A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C