| p-value: | 1e-13 |
| log p-value: | -3.077e+01 |
| Information Content per bp: | 1.857 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 46.15% |
| Number of Background Sequences with motif | 107.7 |
| Percentage of Background Sequences with motif | 0.17% |
| Average Position of motif in Targets | 71.5 +/- 54.1bp |
| Average Position of motif in Background | 105.9 +/- 64.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GAVCCATGAAAA--- AGAGCCATAAAATTCG |
|
|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA -VGCCATAAAA- |
|
|
|
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA -GGCMATGAAA- |
|
|
|
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA -RGCAATNAAA- |
|
|
|
Arid3a/MA0151.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.70 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA -----ATTAAA- |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.69 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA --CYHATAAAAN |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAVCCATGAAAA -KGCCATAAAA- |
|
|
|
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.68 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA -NCYAATAAAA- |
|
|
|
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer
| Match Rank: | 9 |
| Score: | 0.68 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA -NGCAATTAAA- |
|
|
|
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | GAVCCATGAAAA -GGYAATGAAA- |
|
|
|