Information for 1-STAAGGKAKCWA (Motif 1)

A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A
Reverse Opposite:
A G C T C G T A A C T G G T A C C G A T G T C A A G T C A G T C A G C T A C G T T C G A A T C G
p-value:1e-13
log p-value:-3.211e+01
Information Content per bp:1.824
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif25.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets92.2 +/- 41.4bp
Average Position of motif in Background85.9 +/- 55.2bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0166.1_Six6_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-STAAGGKAKCWA----
AATAGGGTATCAATATT
A C G T A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-STAAGGKAKCWA----
AATAGGGTATCAATTAT
A C G T A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:STAAGGKAKCWA--
--AATGTATCAATT
A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T
A C G T A C G T G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--STAAGGKAKCWA--
ATGTACAGTAGCAAAG
A C G T A C G T A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:STAAGGKAKCWA-
--AATGTATCAAT
A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T
A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-STAAGGKAKCWA----
GATGGGGTATCATTTTT
A C G T A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--STAAGGKAKCWA--
ATTTACAGTAGCAAAA
A C G T A C G T A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0059.1_Six6_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-STAAGGKAKCWA----
AATAGGGTATCATATAT
A C G T A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

DMRTA2/MA1478.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:STAAGGKAKCWA--
--AATGTAACAATT
A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T
A C G T A C G T T G C A G C T A G C A T C T A G G A C T C G T A C G T A T G A C T C G A C G T A G C A T C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--STAAGGKAKCWA--
NNNTTAGGTAGCNTNT
A C G T A C G T A T G C A G C T C G T A C T G A A C T G A C T G A C G T C G T A A C T G A G T C C G A T C T G A A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T