Information for 20-GAGAGTGTGATC (Motif 36)

A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
Reverse Opposite:
A C T G C G T A A G C T A T G C C G T A A G T C C G T A A G T C A C G T T A G C A C G T A G T C
p-value:1e-5
log p-value:-1.372e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets115.3 +/- 39.7bp
Average Position of motif in Background85.2 +/- 40.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MGA/MA0801.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GAGAGTGTGATC
--AGGTGTGA--
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAGAGTGTGATC---
NAGATWNBNATCTNN
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGAGTGTGATC
-AAGGTGTGAA-
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GAGAGTGTGATC--
--NNHTGTGGTTWN
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C A C G T A C G T
A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAGAGTGTGATC--
-AAGGTGTGAAAAT
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C A C G T A C G T
A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGAGTGTGATC
--AGGTGTGA--
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGTGTGATC
NNNACCGAGAGTNNN---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGAGTGTGATC
-AAGGTGTKAA-
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAGAGTGTGATC
--AGGTGTGAAM
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX3/MA1566.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGAGTGTGATC
-GAGGTGTGAA-
A C T G C G T A A C T G C G T A T A C G A C G T A C T G A C G T A T C G C T G A A C G T A G T C
A C G T C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A A C G T