Information for 11-TTWRGGMCCC (Motif 20)

A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C
Reverse Opposite:
C A T G C A T G C T A G A C T G A G T C G T A C G A C T G C A T G T C A T G C A
p-value:1e-8
log p-value:-2.007e+01
Information Content per bp:1.560
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets87.0 +/- 8.8bp
Average Position of motif in Background111.1 +/- 45.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TTWRGGMCCC
GGTTAGAGACCT
A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTWRGGMCCC--
NNAATTAATGACCNNN
A C G T A C G T A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PLAGL2/MA1548.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTWRGGMCCC--
--TGGGCCCCCT
A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C A C G T A C G T
A C G T A C G T A C G T A C T G A C T G A T C G A T G C A G T C A G T C A G T C G A T C A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTWRGGMCCC
NTTTTACGACC-
A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTWRGGMCCC--
WCATTTTGKCCTCYT
A C G T A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTWRGGMCCC
ANTTTTACGACC-
A C G T A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C
G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTWRGGMCCC
NTTTTACGAC--
A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

HOXD10/MA1506.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTWRGGMCCC
NTTTTACGACC-
A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C
C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTWRGGMCCC
NTTTTACGAC--
A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TTWRGGMCCC--
ANNTTTTACGACNTNN
A C G T A C G T A C G T A C G T A C G T C A G T C G T A C T G A C A T G T C A G T G A C G A T C G T A C G T A C A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A