Information for 8-TATAAAAGCATG (Motif 13)

A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T C G T A A C G T C G T A
p-value:1e-3
log p-value:-9.082e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBP/MA0108.2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TATAAAAGCATG--
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TATAAAAGCATG--
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TATAAAAGCATG
GNCTATAAAAGG---
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TATAAAAGCATG
CTACCAATAAAATTCT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TATAAAAGCATG
NCYAATAAAA-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TATAAAAGCATG
CCYMATAAAA-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TATAAAAGCATG
KGCCATAAAA-----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
C A T G T A C G G A T C G T A C T C G A C A G T C G T A C G T A G C T A G T C A A C G T A C G T A C G T A C G T A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TATAAAAGCATG
CYHATAAAAN----
A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C A C G T A C G T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TATAAAAGCATG
TTCAAAWTAAAAGTC--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T A C G T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TATAAAAGCATG---
TAYAAAAGBWGGCAG
A C G T C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C C G T A A C G T A C T G A C G T A C G T A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G