Information for 2-RGACACTGCC (Motif 13)

C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A C T G A C G T C T A G A C G T A G T C A G C T
p-value:1e-10
log p-value:-2.369e+01
Information Content per bp:1.921
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif96.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets93.8 +/- 34.3bp
Average Position of motif in Background108.0 +/- 80.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RGACACTGCC
NAGAAACAGNN
A C G T C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C
C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--RGACACTGCC-----
AATCGCACTGCATTCCG
A C G T A C G T C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:RGACACTGCC----
-----CTGCCCGCA
C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

ETV6/MA0645.1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:RGACACTGCC---
---CACTTCCGCT
C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--RGACACTGCC----
CGACCAACTGCCATGC
A C G T A C G T C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:RGACACTGCC---
---CACTTCCTCT
C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

ETV5/MA0765.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:RGACACTGCC---
--CCACTTCCGGC
C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A T G C A T G C T C G A A T G C G A C T A G C T A T G C A T G C A C T G A T C G A G T C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RGACACTGCC--
GGACACACCCCC
C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--RGACACTGCC--
NAGGTCANTGACCT
A C G T A C G T C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:RGACACTGCC---
---CACTTCCTGT
C T G A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T