Information for 21-TAATGAACTGTT (Motif 23)

A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T C G T A
p-value:1e-4
log p-value:-1.045e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:TAATGAACTGTT
--ATGAACTTT-
A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C T G A G A C T T C A G G T C A G T C A A G T C A G C T G A C T G C A T A C G T

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAATGAACTGTT
NTAATGAGCT---
A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T A C G T A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAATGAACTGTT
ATAATGAGGT---
A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
C T G A G A C T T C G A C G T A A C G T A C T G G C T A A C T G T A C G C G A T A C G T A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TAATGAACTGTT
NTAATGAN-----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

PH0074.1_Hoxd1/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAACTGTT
TAAACTAATTAGCTGTA
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A

PB0066.1_Sox17_1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TAATGAACTGTT---
NNATNAATTGTTTNN
A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAATGAACTGTT
GGYAATGAAA----
A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAACTGTT
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

PH0154.1_Prrx1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAACTGTT
GTAACTAATTAACTACT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T

HOXB4/MA1499.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TAATGAACTGTT
NTAATGAT-----
A C G T A C G T C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C G T
A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T A C G T A C G T A C G T A C G T