| p-value: | 1e-5 |
| log p-value: | -1.301e+01 |
| Information Content per bp: | 1.904 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 0.38% |
| Number of Background Sequences with motif | 4.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 109.6 +/- 37.9bp |
| Average Position of motif in Background | 155.4 +/- 50.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.75 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCACCTAYCTAC- TTGACCTANTTATN |
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RORC/MA1151.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTAYCTAC TGACCTANTTAN |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTAYCTAC TGACCTARTT-- |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTAYCTAC TGACCTARTT-- |
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|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCACCTAYCTAC BTGACCTAVTTW- |
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|
|
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 6 |
| Score: | 0.58 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TCACCTAYCTAC TGACACCT------ |
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|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TCACCTAYCTAC NTGACCTAATT-- |
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|
SD0001.1_at_AC_acceptor/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | TCACCTAYCTAC NNACTTACCTN- |
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|
|
ZEB1/MA0103.3/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TCACCTAYCTAC CCCACCTGCGC-- |
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HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TCACCTAYCTAC GCACGTACCC-- |
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