Information for 4-GCATATAGGC (Motif 28)

A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T C G T A A C G T C G T A A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.363e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif24.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background92.5 +/- 117.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCATATAGGC
ACATATGG--
A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCATATAGGC---
ANNNGGATATATCCNNN
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GCATATAGGC
ATTTGCATAT----
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCATATAGGC
ANCATATGGT-
A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C
C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T

SRF/MA0083.3/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCATATAGGC---
TGACCATATATGGTCA
A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T
G C A T A C T G G T C A A T G C A G T C C G T A C G A T C T G A A C G T C G T A G C A T T A C G C T A G C A G T T G A C C G T A

OLIG3/MA0827.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCATATAGGC
ANCATATGGT-
A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCATATAGGC
ACCATATGGC-
A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCATATAGGC
NACATATGGN-
A C G T A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATATAGGC-----
GTATAAAAGGCGGGG
A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCATATAGGC-----
GTATAAAAGGCGGGG
A C T G A G T C C G T A A C G T C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G