Information for 21-CCTGGCAC (Motif 45)

A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G T C C G T A A C T G A C T G
p-value:1e0
log p-value:-1.499e+00
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif342.1
Percentage of Background Sequences with motif0.72%
Average Position of motif in Targets90.4 +/- 48.6bp
Average Position of motif in Background98.7 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CCTGGCAC
CTTGGCAA
A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGCAC
VGCTGGCA-
A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCTGGCAC-
TACTTGGCAGA
A C G T A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CCTGGCAC-
NTTGGCANN
A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZBTB12/MA1649.1/Jaspar

Match Rank:5
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCTGGCAC--
ATCTGGAACCC
A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGCAC-
NNTTGGCANN
A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGCAC
GGTTGGCAT
A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCTGGCAC-
VGCTGWCAVB
A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTGGCAC--
CCAGGAACAG
A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C G T A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGCAC
NGTGGGCAT
A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A G T C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T