Information for 25-AATCAAGTGC (Motif 28)

C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T
p-value:1e-2
log p-value:-6.484e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif74.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background106.9 +/- 120.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:AATCAAGTGC
-NTCAAGTGG
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

NKX2-3/MA0672.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AATCAAGTGC-
-NTCAAGTGGN
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AATCAAGTGC
CCAATCAA----
A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AATCAAGTGC-
-BTBRAGTGSN
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

TFE3/MA0831.2/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AATCAAGTGC
-GTCACGTG-
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A C G T T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AATCAAGTGC--
--TTRAGTGSYK
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATCAAGTGC----
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AATCAAGTGC
TAATCAATTA-
A C G T C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AATCAAGTGC--
--TTGAGTGSTT
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AATCAAGTGC
--TTAAGTGC
C G T A C G T A A C G T A G T C C G T A C G T A A C T G A C G T A C T G A G T C
A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C