Information for 6-GGACTGACCG (Motif 13)

A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C G T A G T C C G T A A C T G A C G T A G T C A G T C
p-value:1e-10
log p-value:-2.318e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.0 +/- 14.1bp
Average Position of motif in Background33.9 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1H4/MA1110.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGACTGACCG-
TCAATGACCTA
A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGACTGACCG---
TTTGAGTGACAGCTA
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGACTGACCG-
NTGATTGACAGN
A C G T A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGACTGACCG
GTGGCGTGACNG
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGACTGACCG--
TGAGTGACAGSC
A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGACTGACCG----
GGGTGAGTGACAGGCGG
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGACTGACCG-
BTGABTGACAGS
A C G T A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGACTGACCG
----TGACCT
A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

NR2C1/MA1535.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGACTGACCG--
---NTGACCTCN
A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GGACTGACCG--
----TGACCYCT
A C T G A C T G C G T A A G T C A C G T A C T G C G T A A G T C A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T