| p-value: | 1e-6 |
| log p-value: | -1.550e+01 |
| Information Content per bp: | 1.780 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 28.57% |
| Number of Background Sequences with motif | 251.0 |
| Percentage of Background Sequences with motif | 0.37% |
| Average Position of motif in Targets | 64.3 +/- 46.3bp |
| Average Position of motif in Background | 106.0 +/- 69.4bp |
| Strand Bias (log2 ratio + to - strand density) | 1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.50 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AGAKCTTCATAG-- ----TTTCATKGCC |
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POL008.1_DCE_S_I/Jaspar
| Match Rank: | 2 |
| Score: | 0.60 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AGAKCTTCATAG ---GCTTCC--- |
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|
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AGAKCTTCATAG-- ----TTTNATTGCY |
|
|
|
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AGAKCTTCATAG-- ----TTTCATTRCC |
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|
|
PB0178.1_Sox8_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AGAKCTTCATAG---- --ACATTCATGACACG |
|
|
|
Esrrg/MA0643.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AGAKCTTCATAG ATGACCTTGA--- |
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|
|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | AGAKCTTCATAG-- ----TTTTATGGCB |
|
|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | AGAKCTTCATAG--- ---NTTTCATTRCHD |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | AGAKCTTCATAG- ---NTTTTATDRG |
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|
PB0005.1_Bbx_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.54 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGAKCTTCATAG----- --NANTTCATTGAATTA |
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