Information for 1-GCAGTCTTGG (Motif 6)

A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
Reverse Opposite:
A G T C A T G C C G T A C T G A C T A G T C G A A G T C A C G T A C T G A G T C
p-value:1e-4
log p-value:-9.922e+00
Information Content per bp:1.797
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif819.6
Percentage of Background Sequences with motif0.85%
Average Position of motif in Targets114.0 +/- 31.9bp
Average Position of motif in Background102.3 +/- 90.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTCTTGG-
CCTTGCAATTTTTNN
A C G T A C G T A C G T A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

ZNF136/MA1588.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGTCTTGG-----
GAATTCTTGGTTGAC
A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G A C G T A C G T A C G T A C G T A C G T
T C A G C G T A T C G A C G A T A G C T G A T C A G C T C A G T C T A G C T A G G A C T C A G T C T A G C T G A G T A C

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCAGTCTTGG
GCNGCCATCTTG-
A C G T A C G T A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCAGTCTTGG
GCCGCCATCTTG-
A C G T A C G T A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCAGTCTTGG
-CAAGCTT--
A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCAGTCTTGG
TAAGGCGTCTTG-
A C G T A C G T A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTCTTGG
NGAAGC-----
A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:8
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------GCAGTCTTGG---
NNNNGGCAGCCATTTTGNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G A C G T A C G T A C G T
A G T C T A C G T A C G C T G A T C A G C T A G T A G C T G C A C A T G T G A C A G T C T C G A G A C T A G C T G C A T G A C T C A T G C A T G C G T A C G T A T A G C

Arid5a/MA0602.1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTCTTGG
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTCTTGG
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T A C T G G T A C C G T A C T A G A G C T A G T C A G C T A C G T A T C G C T A G
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G