Information for 5-GTCAAATTTC (Motif 26)

A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C T G C G T A A G T C
p-value:1e-3
log p-value:-7.788e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif9.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background67.0 +/- 57.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GTCAAATTTC
GKVTCADRTTWC
A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----GTCAAATTTC-
VGGTVTCAGRTTWCA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
T A G C T C A G T C A G C A G T T C A G A C G T A G T C T C G A C T A G C T A G A C G T A C G T C G A T G T A C G T C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GTCAAATTTC
GKMTCADRTTWC
A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C

RXRG/MA0856.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTCAAATTTC-
GGGGTCAAAGGTCA
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTCAAATTTC-
GGGGTCAAAGGTCA
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRB/MA0855.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTCAAATTTC-
GGGGTCAAAGGTCA
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

PPARD/MA1550.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTCAAATTTC--
AGGGGTCAAAGGTCAA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T
G C T A T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T C A

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCAAATTTC-
GAGGTCAAAGGTCA
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

NR2F1(var.2)/MA1537.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTCAAATTTC--
GAGGTCAAAGGTCAC
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T A C

PB0169.1_Sox15_2/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTCAAATTTC------
-TNGAATTTCATTNAN
A C T G A C G T A G T C C G T A C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A