Information for 17-STATAAATTYAT (Motif 21)

A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T
Reverse Opposite:
C G T A A C G T T C A G C G T A C T G A A C G T C A G T A G C T C G T A A C G T C G T A A T G C
p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.810
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif52.7
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets116.8 +/- 54.3bp
Average Position of motif in Background92.2 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:STATAAATTYAT---
GTATAAAAGGCGGGG
A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:STATAAATTYAT---
GTATAAAAGGCGGGG
A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-STATAAATTYAT---
NNNNTGAATTCANNNC
A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PH0172.1_Tlx2/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---STATAAATTYAT--
AANTTATTAATTAATTA
A C G T A C G T A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T A C G T A C G T
G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-STATAAATTYAT
ACTATAAATAGA-
A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---STATAAATTYAT-
TCTTTATATATAAATA
A C G T A C G T A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PH0018.1_Dbx1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---STATAAATTYAT--
TNATTATTAATTAATTA
A C G T A C G T A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T A C G T A C G T
G A C T C G T A G C T A A G C T G A C T C G T A C G A T G C A T C G T A C G T A G C A T C G A T C G T A C G T A G A C T C G A T C T G A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--STATAAATTYAT
NGYCATAAAWCH--
A C G T A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T

PB0198.1_Zfp128_2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-STATAAATTYAT-
NNTATANATATACN
A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----STATAAATTYAT
CTACCAATAAAATTCT
A C G T A C G T A C G T A C G T A T C G A C G T C G T A A C G T C T G A G T C A C G T A A G C T A C G T A G T C T G C A C G A T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T