| p-value: | 1e-3 |
| log p-value: | -7.960e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 5.88% |
| Number of Background Sequences with motif | 0.7 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 104.0 +/- 0.0bp |
| Average Position of motif in Background | 174.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RREB1/MA0073.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCTCCAACCATC-------- CCCCAAACCACCCCCCCCCA |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 2 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | CCTCCAACCATC- ---YCATCMATCA |
|
|
|
NFYC/MA1644.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.55 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CCTCCAACCATC -AGCCAATCAGA |
|
|
|
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 4 |
| Score: | 0.55 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CCTCCAACCATC-- --GYCATCMATCAT |
|
|
|
Dux/MA0611.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.55 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CCTCCAACCATC ---CCAATCAA- |
|
|
|
KLF4/MA0039.4/Jaspar
| Match Rank: | 6 |
| Score: | 0.54 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CCTCCAACCATC CGCCCCACCCCC- |
|
|
|
NFYA/MA0060.3/Jaspar
| Match Rank: | 7 |
| Score: | 0.54 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CCTCCAACCATC -AACCAATCAGA |
|
|
|
PB0193.1_Tcfe2a_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.53 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CCTCCAACCATC------- --CCNNACCATCTGGCCTN |
|
|
|
Sox5/MA0087.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.53 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | CCTCCAACCATC ----NAACAAT- |
|
|
|
PH0134.1_Pbx1/Jaspar
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | CCTCCAACCATC-------- ---TCACCCATCAATAAACA |
|
|
|