Information for 13-AATCTGATTTCC (Motif 14)

C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A C G T A C G T A A C G T A G T C C G T A A C T G C G T A A C G T A C G T
p-value:1e-3
log p-value:-9.120e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-AATCTGATTTCC
TAATCHGATTAC-
A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C A C G T

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATCTGATTTCC----
TNNNATGATTTCNNCNN
A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATCTGATTTCC
YTAATYNRATTA--
A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T A C G T

PHOX2B/MA0681.2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AATCTGATTTCC
NNATAATTTGATTANN
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:forward strand
Alignment:AATCTGATTTCC----
------ATTTCCTGTN
C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATCTGATTTCC
NTAATBNAATTA--
A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AATCTGATTTCC-----
----TTACTTCCTNGTN
C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AATCTGATTTCC
GKMTCADRTTWC-
A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATCTGATTTCC
VGGTVTCAGRTTWCA
A C G T A C G T A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
T A G C T C A G T C A G C A G T T C A G A C G T A G T C T C G A C T A G C T A G A C G T A C G T C G A T G T A C G T C A

PHOX2A/MA0713.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATCTGATTTCC
TAATTTAATTA--
A C G T C G T A C G T A A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C G T A G T C A G T C
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T