Information for 12-RACAGGACAGYA (Motif 18)

C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
Reverse Opposite:
A C G T T C G A G T A C A C G T A T C G C A G T A T G C G T A C G A C T A C T G A G C T A G C T
p-value:1e-5
log p-value:-1.193e+01
Information Content per bp:1.674
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif343.4
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets49.0 +/- 19.1bp
Average Position of motif in Background101.8 +/- 84.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:RACAGGACAGYA
-TRAGGTCA---
C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-RACAGGACAGYA
TTAAAGGTCAAA-
A C G T C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RACAGGACAGYA
---AGGTCA---
C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---RACAGGACAGYA
ANGNAAAGGTCA---
A C G T A C G T A C G T C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RACAGGACAGYA
-AGRGGTCA---
C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

ZBTB32/MA1580.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:RACAGGACAGYA-
---TGTACAGTAT
C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A A C G T
A C G T A C G T A C G T G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RACAGGACAGYA
CAAAGGTCAG--
C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---RACAGGACAGYA
GKBCARAGGTCA---
A C G T A C G T A C G T C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---RACAGGACAGYA-
TCTCAAAGGTCACGAG
A C G T A C G T A C G T C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---RACAGGACAGYA
NRBCARRGGTCA---
A C G T A C G T A C G T C T G A C T G A T G A C C T G A A C T G A T C G G C T A T A G C C G T A A C T G A G C T C G T A
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T