Information for 6-TTGAGGCTAAMT (Motif 6)

G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T
Reverse Opposite:
C T G A A C T G A G C T G A C T C G T A A C T G G A T C G A T C C A G T A T G C C G T A C G T A
p-value:1e-5
log p-value:-1.163e+01
Information Content per bp:1.636
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif35.29%
Number of Background Sequences with motif2009.2
Percentage of Background Sequences with motif3.15%
Average Position of motif in Targets99.4 +/- 66.1bp
Average Position of motif in Background100.8 +/- 65.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL1/MA0877.2/Jaspar

Match Rank:1
Score:0.59
Offset:6
Orientation:forward strand
Alignment:TTGAGGCTAAMT--
------CTAAACGG
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TTGAGGCTAAMT---
-----GCTAAACGGT
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTGAGGCTAAMT
--TWGTCTGV--
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TTGAGGCTAAMT
NNTTGAGGTTNN--
A C G T A C G T G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTGAGGCTAAMT---
-----GCTAATTAGN
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

TLX2/MA1577.1/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TTGAGGCTAAMT--
------CTAATTAN
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A G C T C T G A T C A G

LBX2/MA0699.1/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TTGAGGCTAAMT---
-----NNTAATTGGN
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T T G C A T G C A A C G T A C G T C T A G T C A G A G T C

PH0167.1_Tcf1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTGAGGCTAAMT-----
CCTTAGTTAACTAAAAT
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

HOXD3/MA0912.2/Jaspar

Match Rank:9
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTGAGGCTAAMT--
------CTAATTAC
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C

ARGFX/MA1463.1/Jaspar

Match Rank:10
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TTGAGGCTAAMT---
-----TCTAATTAAA
G A C T G A C T T A C G G C T A C A T G C T A G G T A C A C G T C G T A C T G A G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T G A T C G A C T G T C A C G T A A C G T A G C T C T G A C T G A G T C A