Information for 8-TTAATACATATT (Motif 8)

A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T C G T A A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A
p-value:1e-11
log p-value:-2.638e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets150.3 +/- 26.4bp
Average Position of motif in Background48.4 +/- 45.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTAATACATATT
TTATTAGTACATAN-
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTAATACATATT
CCTTAATNGNTTTT
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTAATACATATT-
---ATGAATATTC
A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTAATACATATT
NTTGATACATT--
A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TTAATACATATT-
---ATGMATATDC
A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

DMRTC2/MA1479.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTAATACATATT
AATTGATACATT--
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTAATACATATT-----
TAAATACATGTAAAATT
A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTAATACATATT-----
AATATACATGTAAAATT
A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTAATACATATT---
CTCATGAATATTCAT
A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T

PB0080.1_Tbp_1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTAATACATATT--
NANTTATATATAANGN
A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A A C G T C G T A A C G T A C G T A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A