| p-value: | 1e-5 |
| log p-value: | -1.189e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 17.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Hoxa11/MA0911.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AATGTTACGA-- ANTTTTACGACC |
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DMRTA2/MA1478.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AATGTTACGA-- AATGTAACAATT |
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|
|
HOXB9/MA1503.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATGTTACGA- -NTTTTACGAC |
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|
PH0048.1_Hoxa13/Jaspar
| Match Rank: | 4 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATGTTACGA----- ANATTTTACGAGNNNN |
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|
|
HOXC12/MA0906.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATGTTACGA-- -NTTTTACGACC |
|
|
|
HOXC9/MA0485.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATGTTACGA- -NTTTTACGAC |
|
|
|
PH0077.1_Hoxd12/Jaspar
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --AATGTTACGA----- NNNATTTTACGACNNTN |
|
|
|
PH0068.1_Hoxc13/Jaspar
| Match Rank: | 8 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATGTTACGA----- NAATTTTACGAGNTNN |
|
|
|
HOXD10/MA1506.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATGTTACGA-- -NTTTTACGACC |
|
|
|
HOXD11/MA0908.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AATGTTACGA- -NTTTTACGAC |
|
|
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