Information for 1-GCCTGGGAGA (Motif 4)

A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A
Reverse Opposite:
A C G T A G T C A G C T A G T C A G T C A G T C C G T A C T A G A C T G A G T C
p-value:1e-5
log p-value:-1.260e+01
Information Content per bp:1.905
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif222.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets145.2 +/- 22.8bp
Average Position of motif in Background101.3 +/- 75.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCCTGGGAGA-
-CSTGGGAAAD
A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A A C G T
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A

RBPJ/MA1116.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCTGGGAGA-
-CCTGGGAAAG
A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A A C G T
A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGGAGA
TGCGTGGGYG-
A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:4
Score:0.66
Offset:-7
Orientation:forward strand
Alignment:-------GCCTGGGAGA
GGGGCTYGKCTGGGA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGGAGA
VTGYGKGGGAGK
A C G T A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G

ZNF75D/MA1601.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCTGGGAGA
ATGTGGGAAA
A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A
T C G A C A G T C T A G G A C T T C A G C A T G A T C G G T C A T C G A C T G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGGAGA
WDNCTGGGCA-
A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

Znf281/MA1630.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTGGGAGA--
-GGTGGGGGAGG
A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A A C G T A C G T
A C G T C T A G T A C G A G C T T A C G T A C G T A C G A T C G A C T G G T C A C A T G T C A G

EGR2/MA0472.2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGGGAGA
TGCGTGGGCGT
A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCTGGGAGA-
NGCGTGGGCGGR
A C G T A C T G A G T C A G T C A C G T A C T G A C T G A C T G C T G A C T A G C G T A A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G