| p-value: | 1e-8 |
| log p-value: | -1.890e+01 |
| Information Content per bp: | 1.808 |
| Number of Target Sequences with motif | 50.0 |
| Percentage of Target Sequences with motif | 4.77% |
| Number of Background Sequences with motif | 912.7 |
| Percentage of Background Sequences with motif | 1.89% |
| Average Position of motif in Targets | 91.8 +/- 63.5bp |
| Average Position of motif in Background | 100.8 +/- 56.3bp |
| Strand Bias (log2 ratio + to - strand density) | -0.8 |
| Multiplicity (# of sites on avg that occur together) | 1.02 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NFY(CCAAT)/Promoter/Homer
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATTCGGTC CCGATTGGCT- |
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POL004.1_CCAAT-box/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATTCGGTC-- TGATTGGCTANN |
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|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATTCGGTC-- WAABTAGGTCAV |
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|
PH0026.1_Duxbl/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | -8 |
| Orientation: | reverse strand |
| Alignment: | --------ATTCGGTC- NNNNGTTGATTGGGTCG |
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|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATTCGGTC-- TATAAGTAGGTCAA |
|
|
|
NFYC/MA1644.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATTCGGTC NCTGATTGGNN- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTCGGTC- AAYTAGGTCA |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTCGGTC- AAYTAGGTCA |
|
|
|
NFYA/MA0060.3/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ATTCGGTC NCTGATTGGNN- |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTCGGTC-- AATTAGGTCAC |
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