Information for 17-TAAAMACACATG (Motif 29)

A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G
Reverse Opposite:
A G T C C G T A A C G T A C T G G A C T A C T G A C G T C A G T A G C T A C G T A C G T T C G A
p-value:1e-5
log p-value:-1.340e+01
Information Content per bp:1.800
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.29%
Number of Background Sequences with motif602.8
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets104.7 +/- 57.2bp
Average Position of motif in Background96.9 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TAAAMACACATG--
----GACACATGGC
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

Twist2/MA0633.1/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TAAAMACACATG--
----NACATATGGN
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

TFAP4(var.2)/MA1570.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TAAAMACACATG--
----AACATATGTT
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G T C A A T G C C G T A A G C T T C G A A G C T A C T G C A G T A G C T

Rbpjl/MA1621.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TAAAMACACATG----
--CGAACACCTGTCCC
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C T C A G T G C A T C G A G T A C C T G A A T G C T A G C A G C T A T C G A G C T A T G C G A T C A G T C

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TAAAMACACATG---
---ACACACCTGTGC
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T G A C T C G A T G A C C G T A A T G C T A G C A C G T A C T G A G C T A C T G G A T C

CLOCK/MA0819.1/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TAAAMACACATG--
----AACACGTGTT
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAAAMACACATG
--DGCACACGTG
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G
A C G T A C G T C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G

FOXE1/MA1487.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAAAMACACATG
CCTTAAATAAACAAT
A C G T A C G T A C G T A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G
A T G C T G A C A G C T C G A T T C G A C G T A C T G A A G C T G T C A G T C A C G T A A G T C C T G A C G T A G A C T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TAAAMACACATG--
--NNACCACGTGGT
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T
A C G T A C G T C G A T T C A G T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TAAAMACACATG---
---GCACACCTGKNC
A G C T C G T A G T C A T C G A G T C A G T C A A G T C C G T A A G T C G T C A A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A T G C G C T A A G T C C G T A A G T C A G T C A C G T C T A G A C G T T G A C G A T C