Information for 16-GGGTTTAGGC (Motif 30)

A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T C G T A C G T A C G T A A G T C A G T C A G T C
p-value:1e-3
log p-value:-6.992e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif28.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets141.0 +/- 0.0bp
Average Position of motif in Background87.9 +/- 105.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTTAGGC
NGGGATTA---
A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGGTTTAGGC
GGGATTANN-
A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

PITX1/MA0682.2/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGTTTAGGC
NGGATTAN--
A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTTAGGC
VRGGATTARN-
A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTTAGGC
NNGGATTAGN-
A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGGTTTAGGC
-GGATTAGC-
A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

PITX2/MA1547.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGTTTAGGC
GGGATTAN--
A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGTTTAGGC
AAGGGATTAGAA
A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PH0015.1_Crx/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGGTTTAGGC-
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGGTTTAGGC
AAGAGGATTAG--
A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T C G T A A C T G A C T G A G T C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T