Information for 18-TGGTCATAAGGT (Motif 19)

A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets186.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARA/MA0729.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TGGTCATAAGGT-----
GAGGTCAAAAGGTCAATG
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGGTCATAAGGT---
AAGGTCAAAAGGTCAA
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGGTCATAAGGT--
AAAGGTCAAAAGGTCA
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGGTCATAAGGT--
GAGGTCAAAAGGTCA
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGGTCATAAGGT
CYWSTGGTCARA----
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGTCATAAGGT---
GGGTCAACGAGTTCA
A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

HNF4A(var.2)/MA1494.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGGTCATAAGGT---
GGGTCCAAAGGTCAC
A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T C A G C T A G C A T G C A G T G A T C G A T C C T G A C G T A C T G A A C T G C A T G A C G T A G T C C T G A G T A C

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGTCATAAGGT-
-NGCCATATGGTG
A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGTCATAAGGT-
---NNATAAGGNN
A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

ATOH7/MA1468.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGTCATAAGGT
--GACATATGTT
A C G T A C T G A C T G A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T
A C G T A C G T C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T