Information for 23-GCACATAGGC (Motif 38)

A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-6.914e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif36.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets102.0 +/- 0.0bp
Average Position of motif in Background92.7 +/- 117.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GCACATAGGC--
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCACATAGGC--
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCACATAGGC
GCACGTACCC
A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GCACATAGGC
TACATGTGCACATAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NFYB/MA0502.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCACATAGGC---
-CTCATTGGCCAG
A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCACATAGGC
--ACATATGG
A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G

MXI1/MA1108.2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCACATAGGC
GACACATGGC-
A C G T A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCACATAGGC
GGAACAAAGR-
A C G T A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------GCACATAGGC
CAGATGTGCACATACGT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCACATAGGC
BGCACGTA---
A C G T A C T G A G T C C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T