Information for 21-GAGGTGCTCC (Motif 27)

A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G T G C A A T C G A G T C C G T A A G T C A G T C A C G T A G T C
p-value:1e-3
log p-value:-8.737e+00
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif32.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets80.7 +/- 60.0bp
Average Position of motif in Background102.0 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGGTGCTCC-
-CNGTCCTCCC
A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTGCTCC
SDGCAGGTGCNS-
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

TCF4/MA0830.2/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GAGGTGCTCC
NNGGCAGGTGCNN-
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGGTGCTCC
NNCAGGTGNN--
A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGTGCTCC
GGCAGGTGCA--
A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGGTGCTCC---
GCGGAGGTGTCGCCTC
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTGCTCC----
NNANTGGTGGTCTTNNN
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAGGTGCTCC-
-----GCTCCG
A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GAGGTGCTCC
NNGCAGGTGNN--
A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G A C G T A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAGGTGCTCC
NNGACAGGTGCNN-
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C T G T A G C A C G T A G T C A G T C
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T A C G T