| p-value: | 1e-3 |
| log p-value: | -8.900e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 122.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
CDX1/MA0878.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.84 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGGGCCATAAAA- --GGCCATAAAAC |
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CDX4/MA1473.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.82 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGGGCCATAAAA- --GGCAATAAAAC |
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PH0064.1_Hoxb9/Jaspar
| Match Rank: | 3 |
| Score: | 0.82 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGGCCATAAAA---- AGAGCCATAAAATTCG |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.81 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGGGCCATAAAA --KGCCATAAAA |
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PH0056.1_Hoxa9/Jaspar
| Match Rank: | 5 |
| Score: | 0.80 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGGCCATAAAA----- ACGGCCATAAAATTAAT |
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PH0013.1_Cdx2/Jaspar
| Match Rank: | 6 |
| Score: | 0.80 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGGGCCATAAAA--- AAAGGTAATAAAATTT |
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Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 7 |
| Score: | 0.78 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GGGGCCATAAAA --VGCCATAAAA |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 8 |
| Score: | 0.77 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGGGCCATAAAA- ---GTCATAAAAN |
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HOXD9/MA0913.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.77 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGGGCCATAAAA- ---GCAATAAAAC |
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PH0012.1_Cdx1/Jaspar
| Match Rank: | 10 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGGGCCATAAAA--- TAAGGTAATAAAATTA |
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