| p-value: | 1e-3 |
| log p-value: | -8.720e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.69% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 6.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 1 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CAGACCAAGATC NNHYTGACCTAGWTT |
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GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer
| Match Rank: | 2 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACCAAGATC-- NNAGATNVNWATCTN |
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|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 3 |
| Score: | 0.56 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACCAAGATC BCAGACWA----- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CAGACCAAGATC -TGACCTARTT- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CAGACCAAGATC -TGACCTARTT- |
|
|
|
ESRRA/MA0592.3/Jaspar
| Match Rank: | 6 |
| Score: | 0.55 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CAGACCAAGATC--- --GCTCAAGGTCACA |
|
|
|
Nr5a2/MA0505.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CAGACCAAGATC--- AAGTTCAAGGTCAGC |
|
|
|
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
| Match Rank: | 8 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CAGACCAAGATC CCAGACAG----- |
|
|
|
PB0166.1_Sox12_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CAGACCAAGATC- AAACAGACAAAGGAAT |
|
|
|
Hand1::Tcf3/MA0092.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.54 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----CAGACCAAGATC ATGCCAGACN------ |
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