Information for 10-TCCATATTATGC (Motif 14)

A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets17.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCCATATTATGC
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCCATATTATGC
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCATATTATGC-
-CCATATATGGNA
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T
A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

HLF/MA0043.3/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TCCATATTATGC-----
---TTGTTATGCAACAA
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

PB0078.1_Srf_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCATATTATGC-
TTCCATATATGGAA
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCCATATTATGC----
-CCATTGTATGCAAAT
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

NFIL3/MA0025.2/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCCATATTATGC-----
----TATTATGCAATAT
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCCATATTATGC-------
--TNNATTATGCATANNTT
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCATATTATGC
-CCATATATGG-
A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C
A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TCCATATTATGC--
NNCTNAATTATGANN
A C G T A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A