Information for 18-AAGAAGATGCTC (Motif 20)

C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C C G T A A C G T A G T C A C G T A C G T A G T C A C G T A C G T
p-value:1e-3
log p-value:-9.086e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGAAGATGCTC----
-AGATGCTRCTRCCHT
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGAAGATGCTC
-AGCAGCTGCT-
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGAAGATGCTC-
-AACAGATGGTCN
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T
A C G T C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGAAGATGCTC
-ACCAGATGGC-
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C
A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGAAGATGCTC
-AACAGATGGT-
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C
A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGAAGATGCTC
-NGAAGC-----
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

POL005.1_DPE/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AAGAAGATGCTC
--GAAGATGTT-
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C
A C G T A C G T T C A G G T C A C T G A A T C G G C T A G A C T T A C G G A C T G A C T A C G T

Ptf1a/MA1618.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGAAGATGCTC-
AAACAGATGTTTA
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T
C G T A T G C A T G C A G A T C T C G A A C T G T G C A G A C T C T A G A C G T A G C T A C G T G T C A

MAFF/MA0495.3/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AAGAAGATGCTC----
NNNAAAATGCTGACTN
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C A T T C A G G T A C G C A T C A T G G C T A A T G C G C A T G A C T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AAGAAGATGCTC-
-DGCAGCTGCYSS
C G T A C G T A A C T G C G T A C G T A A C T G C G T A A C G T A C T G A G T C A C G T A G T C A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C