Information for 10-GTACTGGGTC (Motif 28)

A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A G T C C G T A A C T G A C G T C G T A A G T C
p-value:1e-3
log p-value:-7.611e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif9.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets163.0 +/- 0.0bp
Average Position of motif in Background38.7 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTACTGGGTC-----
AGAGCGGGGTCAAGTA
A C G T A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTACTGGGTC-----
CGCGCCGGGTCACGTA
A C G T A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

NR1D2/MA1532.1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTACTGGGTC--
GGGTTAGTGGGTCAT
A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T
T C A G C A T G C A T G A C G T G A C T C G T A A T C G A C G T C T A G C A T G C T A G C A G T A G T C C T G A C A G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTACTGGGTC--
WAABTAGGTCAV
A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTACTGGGTC-----
AAWCTAGGTCARDNN
A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

Bach1::Mafk/MA0591.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTACTGGGTC-----
NTGCTGAGTCATCCN
A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A C G G A C T A C T G A T G C G A C T A C T G G T C A A T C G C G A T G T A C C G T A A G C T A T G C T A G C A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTACTGGGTC-
-AAYTAGGTCA
A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTACTGGGTC-
-AAYTAGGTCA
A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

NR1D1/MA1531.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GTACTGGGTC--
GGGTCAGTAGGTCAG
A C G T A C G T A C G T A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T
T C A G C A T G C T A G A C G T A G T C C G T A T A C G A C G T T C G A A C T G C T A G A C G T A G T C C T G A C T A G

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTACTGGGTC--
HTGCTGAGTCAT
A C T G A C G T C G T A A G T C A C G T A C T G A C T G A C T G A C G T A G T C A C G T A C G T
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T