Information for 13-CACACACAWCAC (Motif 14)

A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
Reverse Opposite:
C T A G A C G T C T A G C G A T C A G T C T A G A C G T C T A G A C G T T C A G C A G T C T A G
p-value:1e-12
log p-value:-2.932e+01
Information Content per bp:1.691
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif7.84%
Number of Background Sequences with motif1307.2
Percentage of Background Sequences with motif2.74%
Average Position of motif in Targets96.2 +/- 49.9bp
Average Position of motif in Background100.9 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACACACAWCAC
CGAAGCACACAAAATA-
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CACACACAWCAC
AGCGGCACACACGCAA-
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CACACACAWCAC
CAAATCCAGACATCACA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------CACACACAWCAC
NNNVCTGWGYAAACASN----
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T A C G T A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACACACAWCAC-
TGCACACACTGAAAA
A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CACACACAWCAC
CCAGACRSVB---
A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------CACACACAWCAC
TACATGTGCACATAAAA---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CACACACAWCAC
CCAGACAG-----
A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PBX2/MA1113.2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CACACACAWCAC-
GTCATAAATCATT
A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C A C G T
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T

MSANTD3/MA1523.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CACACACAWCAC
GTACACTCAC-----
A C G T A C G T A C G T A G T C G T C A A G T C C G T A A G T C C G T A G A T C G T C A G C T A G A T C C G T A G A T C
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T A C G T