Information for 19-ACTRGTRAAG (Motif 32)

G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G
Reverse Opposite:
G T A C C G A T C G A T A G T C C G T A A T G C A G C T C G T A A C T G C G A T
p-value:1e-4
log p-value:-1.056e+01
Information Content per bp:1.777
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif380.7
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets80.2 +/- 54.9bp
Average Position of motif in Background100.0 +/- 56.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ACTRGTRAAG---
GAAAACTAGTTAACATC
A C G T A C G T A C G T A C G T G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ACTRGTRAAG
ACTAGTTAAC
G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ACTRGTRAAG-
GCTCGTAAAAA
G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G A C G T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTRGTRAAG---
AAACCTCGTAAAATTT
A C G T A C G T A C G T G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PH0168.1_Hnf1b/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACTRGTRAAG----
ANNNCTAGTTAACNGNN
A C G T A C G T A C G T G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

SNAI3/MA1559.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACTRGTRAAG
AACAGGTGCA-
A C G T G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G
C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACTRGTRAAG
VCAGGTRDRY
G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PH0068.1_Hoxc13/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTRGTRAAG---
AAAGCTCGTAAAATTT
A C G T A C G T A C G T G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

SNAI2/MA0745.2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---ACTRGTRAAG
NNGACAGGTGCNN
A C G T A C G T A C G T G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ACTRGTRAAG-
CAATCACTGGCAGAAT
A C G T A C G T A C G T A C G T A C G T G C T A A G T C C G A T C T G A A T C G A C G T T C A G G C T A C G T A A C T G A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T