Information for 7-GGCGATGAGC (Motif 12)

A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C C G T A A C G T A G T C A C T G A G T C A G T C
p-value:1e-3
log p-value:-8.802e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets130.0 +/- 0.0bp
Average Position of motif in Background108.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGCGATGAGC----
GGGCGATGACCAYTC
A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

PH0139.1_Pitx3/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCGATGAGC----
AGGGGGATTAGCTGCC
A C G T A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0015.1_Crx/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCGATGAGC--
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

DPRX/MA1480.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCGATGAGC-
-NGGATTATCT
A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C A C G T
A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCGATGAGC-
GGAGGAGGTGAGAA
A C G T A C G T A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C A C G T
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

ZNF263/MA0528.2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCGATGAGC
GGGGGGAGGAGG
A C G T A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCGATGAGC
GGCCATTAAC
A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGCGATGAGC-
------CAGCC
A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGCGATGAGC--
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C G T
C T G A T C G A A C T G C A T G A G C T A G T C C T G A G A C T T C A G T G C A G T A C G A T C A G C T G A C T

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCGATGAGC
NBWGATAAGR
A C T G A C T G A G T C A C T G C G T A A C G T A C T G C G T A A C T G A G T C
T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A