Information for 7-GACAATCG (Motif 30)

C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G
Reverse Opposite:
A G T C A C T G C G T A A C G T A C G T A T C G A G C T G A T C
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.817
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif448.5
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets117.1 +/- 55.7bp
Average Position of motif in Background102.1 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GACAATCG
VVRRAACAATGG
A C G T A C G T A C G T A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GACAATCG-
GACAATGNN
C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G A C G T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GACAATCG
GAACAATGG
A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACAATCG--
AAACAATGGCA
A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G A C G T A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACAATCG-
RAACAATGGN
A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G A C G T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GACAATCG--
AAACAATGGAA
A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G A C G T A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACAATCG
VRAACAATGG
A C G T A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GACAATCG
RNAACAATGG
A C G T A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0070.1_Sox30_1/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GACAATCG----
AATGAACAATGGAATT
A C G T A C G T A C G T A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GACAATCG---
CTCACACAATGGCGC
A C G T A C G T A C G T A C G T C T A G T C G A A T G C G T C A G T C A A C G T A G T C C T A G A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C