Information for 19-SKACGHCR (Motif 41)

T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G
Reverse Opposite:
G A T C A C T G C G T A G A T C C A T G C G A T T G A C A T G C
p-value:1e-1
log p-value:-4.430e+00
Information Content per bp:1.428
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif43.4
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets93.5 +/- 53.6bp
Average Position of motif in Background108.3 +/- 53.6bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:SKACGHCR
--ACGTCA
T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G
A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

Atf1/MA0604.1/Jaspar

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:SKACGHCR-
-TACGTCAT
T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G A C G T
A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

Gmeb1/MA0615.1/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----SKACGHCR-----
GAGTGTACGTAAGATGG
A C G T A C G T A C G T A C G T T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----SKACGHCR-----
GAGTGTACGTAAGATGG
A C G T A C G T A C G T A C G T T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0131.1_Gmeb1_2/Jaspar

Match Rank:5
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----SKACGHCR----
TNAACGACGTCGNCCA
A C G T A C G T A C G T A C G T T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G A C G T A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A

PB0094.1_Zfp128_1/Jaspar

Match Rank:6
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----SKACGHCR----
TTNGGGTACGCCNNANN
A C G T A C G T A C G T A C G T A C G T T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-SKACGHCR
BGCACGTA-
A C G T T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T

GMEB2/MA0862.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:SKACGHCR
TTACGTAA
T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G
A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A

CREB3L4/MA1474.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--SKACGHCR--
TGCCACGTCACC
A C G T A C G T T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G A C G T A C G T
A G C T C A T G G T A C G T A C T C G A A G T C T C A G A G C T T A G C T C G A A G T C A T G C

HIF1A/MA1106.1/Jaspar

Match Rank:10
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--SKACGHCR
NNGCACGTNC
A C G T A C G T T A C G A C T G G C T A G T A C C T A G G C A T T G A C C T A G
T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C