Information for 20-GTCCCAATCA (Motif 33)

A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C G T A C G T A C T G A C T G A C T G C G T A A G T C
p-value:1e-2
log p-value:-6.810e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif20.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background100.9 +/- 124.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYC/MA1644.1/Jaspar

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GTCCCAATCA--
-AGCCAATCAGA
A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T
A C G T T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.77
Offset:3
Orientation:forward strand
Alignment:GTCCCAATCA-
---CCAATCAA
A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0026.1_Duxbl/Jaspar

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GTCCCAATCA------
CGACCCAATCAACGGTG
A C G T A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GTCCCAATCA--
-AACCAATCAGA
A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T
A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCAATCA---
NNAGTCCCACTCNNNN
A C G T A C G T A C G T A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

EN2/MA0642.1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTCCCAATCA--
--CCCAATTAGC
A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T
A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GTCCCAATCA-
SCTGTCAVTCAV
A C G T A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTCCCAATCA-
---CCAATTAA
A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTCCCAATCA-
TAAYCYAATCAA
A C G T A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T
G C A T T C G A C T G A G A T C A G T C G A T C G T C A G T C A A C G T A G T C C G T A C T G A

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCCCAATCA-----
AAGGCGAAATCATCGCA
A C G T A C G T A C T G A C G T A G T C A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A