Information for 15-CATGGTAATA (Motif 33)

A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A A G T C A G T C C G T A A C G T A C T G
p-value:1e-3
log p-value:-7.153e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif27.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets19.0 +/- 0.0bp
Average Position of motif in Background72.9 +/- 90.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CATGGTAATA--
TATGCWAATBAV
A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A A C G T A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATGGTAATA
TATGCAAAT-
A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CATGGTAATA--
WATGCAAATGAG
A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A A C G T A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU3F4/MA0789.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CATGGTAATA
TATGCAAAT-
A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CATGGTAATA-
TTATGCAAATTA
A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CATGGTAATA
NATGGAAAAN
A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATGGTAATA
TCAAGGTCATA
A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CATGGTAATA
AATATGCAAATT
A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CATGGTAATA
GGTTGCCATGGCAA--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A C G T A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CATGGTAATA-
TTATGCAAATTA
A C G T A G T C C G T A A C G T A C T G A C T G A C G T C G T A C G T A A C G T C G T A A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A