Information for 1-TNNTTTSACCTC (Motif 1)

G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C
Reverse Opposite:
A C T G C G T A A C T G A C T G A C G T A T G C C G T A G T C A C G T A A C T G G A C T C G T A
p-value:1e-7
log p-value:-1.727e+01
Information Content per bp:1.666
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif80.00%
Number of Background Sequences with motif811.3
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets90.4 +/- 64.1bp
Average Position of motif in Background99.0 +/- 76.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.75
Offset:5
Orientation:reverse strand
Alignment:TNNTTTSACCTC-
-----TGACCYCT
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR2C1/MA1535.1/Jaspar

Match Rank:2
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TNNTTTSACCTC-
----NTGACCTCN
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T
A C G T A C G T A C G T A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:TNNTTTSACCTC-
-----TGACCTYA
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:TNNTTTSACCTC-----
-----TGACCTYTGVMC
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T C A G T G C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A T G A C A T G C

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:TNNTTTSACCTC-----
-----TGACCYYTGVYN
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A G T A C A G T C A G C T A G T C C G A T C A T G T G C A A G T C A G T C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:6
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:TNNTTTSACCTC
----NTGACCTN
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C
A C G T A C G T A C G T A C G T C G T A A G C T T C A G G T C A G T A C T G A C A G C T A G T C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.71
Offset:5
Orientation:reverse strand
Alignment:TNNTTTSACCTC
-----TGACCT-
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TNNTTTSACCTC--
-CNNTTGACCTTTG
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T A C G T
A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

NR2F2/MA1111.1/Jaspar

Match Rank:9
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TNNTTTSACCTC--
---NNTGACCTTTN
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T A C G T
A C G T A C G T A C G T G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.70
Offset:5
Orientation:reverse strand
Alignment:TNNTTTSACCTC---
-----TGACCTTGAT
G A C T C G T A T A G C C G A T A C G T C G A T A T C G C G T A A G T C G T A C C G A T G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T