Information for 10-GCAGATTGAG (Motif 30)

A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A C G T A A C G T A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-8.099e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.0 +/- 0.0bp
Average Position of motif in Background97.6 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCAGATTGAG
GGAACAGATGGCA
A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCAGATTGAG-
GGACAGATGGCAG
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G A C G T
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCAGATTGAG-
---TATTGAYY
A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGAG
AACAGATGGC-
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGAG
AACAGATGGT-
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGATTGAG
ACCAGATGGC-
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGATTGAG
AACAKATGGY-
A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCAGATTGAG----
NNANTGATTGATNNNN
A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

ZNF317/MA1593.1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCAGATTGAG
TAACAGCAGACT---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAGATTGAG
-TTGATTGN-
A C T G A G T C C G T A A C T G C G T A A C G T A C G T A C T G C G T A A C T G
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T