Information for 25-AAGAGGTCACTC (Motif 29)

C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.906e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.0bp
Average Position of motif in Background121.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AAGAGGTCACTC
-AGRGGTCA---
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AAGAGGTCACTC
GKBCARAGGTCA---
A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:AAGAGGTCACTC
--AAGGTCAC--
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAGAGGTCACTC
-TRAGGTCA---
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAGAGGTCACTC-
TCTCAAAGGTCACCTG
A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

EAR2(NR)/K562-NR2F6-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AAGAGGTCACTC
NRBCARRGGTCA---
A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
T C A G T C A G A C G T G T A C G C T A T C A G C T G A A C T G A C T G A G C T A G T C C G T A A C G T A C G T A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AAGAGGTCACTC
-CGAGGTCAC--
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAGAGGTCACTC--
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AAGAGGTCACTC-
TCTCAAAGGTCACGAG
A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

ATF2/MA1632.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAGAGGTCACTC
AAATGAGGTCATT-
A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A G T C C G T A A G T C A C G T A G T C
C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T A C G T