Information for 24-CTTACCTATTGT (Motif 42)

A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A C G T A A C T G
p-value:1e-1
log p-value:-3.953e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.5 +/- 52.9bp
Average Position of motif in Background127.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTTACCTATTGT
NNACTTACCTN----
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:2
Score:0.67
Offset:5
Orientation:forward strand
Alignment:CTTACCTATTGT---
-----CTATTGTTTT
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

PB0183.1_Sry_2/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTTACCTATTGT-------
--CNNNTATTGTTCNNNNN
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.66
Offset:5
Orientation:forward strand
Alignment:CTTACCTATTGT--
-----CCATTGTTC
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTACCTATTGT------
-ANNTCTATTGTTCNNNA
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

SOX8/MA0868.2/Jaspar

Match Rank:6
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CTTACCTATTGT---
-----CCATTGTTCT
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:CTTACCTATTGT-----
-----CCATTGTTYYBB
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTACCTATTGT
--CACCTACTAT
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T
A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTACCTATTGT------
-GTATCTATTGTTCTTTA
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CTTACCTATTGT--
----NCCATTGTTC
A G T C A C G T A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C