| p-value: | 1e-6 |
| log p-value: | -1.528e+01 |
| Information Content per bp: | 1.782 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 37.50% |
| Number of Background Sequences with motif | 136.0 |
| Percentage of Background Sequences with motif | 0.16% |
| Average Position of motif in Targets | 60.3 +/- 35.9bp |
| Average Position of motif in Background | 108.1 +/- 82.1bp |
| Strand Bias (log2 ratio + to - strand density) | -1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0048.1_Nkx3-1_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -KKASSCAKYTAW---- CTTAACCACTTAAGGAT |
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PH0115.1_Nkx2-6/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | KKASSCAKYTAW---- TAAGCCACTTAACATT |
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|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | KKASSCAKYTAW- ATAACCACTTAAA |
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|
|
ISL2/MA0914.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | KKASSCAKYTAW ----GCACTTAA |
|
|
|
LHX2/MA0700.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | KKASSCAKYTAW- --AACCAATTAAT |
|
|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -KKASSCAKYTAW---- CATAACCACTTAACAAC |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -KKASSCAKYTAW- TTGACCTANTTATN |
|
|
|
Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | KKASSCAKYTAW ---ACCACTTAA |
|
|
|
PH0005.1_Barhl1/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -KKASSCAKYTAW--- AACAACCAATTAATTC |
|
|
|
MSX2/MA0708.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | KKASSCAKYTAW ----CCAATTAA |
|
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