Information for 11-CAAGGAACATAA (Motif 18)

A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T C T A G A C G T A C G T A G T C A G T C A C G T A C G T A C T G
p-value:1e-7
log p-value:-1.790e+01
Information Content per bp:1.930
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.7 +/- 24.0bp
Average Position of motif in Background88.1 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAGGAACATAA----
CGAAGCACACAAAATA
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAAGGAACATAA
--TGGAACAGMA
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAGGAACATAA
CCAGGAACAG--
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T

NFATC4/MA1525.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAAGGAACATAA
AATGGAAAAT--
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAGGAACATAA
NNTGGAAANN--
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAAGGAACATAA
AATGGAAAAT--
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

PB0012.1_Elf3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAAGGAACATAA
AACAAGGAAGTAA-
A C G T A C G T A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CAAGGAACATAA---
---GWAAYHTGAKMC
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Stat2/MA1623.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAAGGAACATAA---
--AGAAACAGAAACT
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAGGAACATAA
--TGGAAAA---
A G T C C G T A T G C A A C T G A C T G C G T A C G T A A G T C C G T A A C G T C G T A C G T A
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T