Information for 3-GGAKCGCMCT (Motif 12)

A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T
Reverse Opposite:
C G T A C A T G C A G T A C T G A G T C C T A G G T A C A C G T G T A C A G T C
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.801
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets88.4 +/- 45.0bp
Average Position of motif in Background95.1 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGAKCGCMCT-
GGGATTGCATNN
A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGAKCGCMCT---
ANCGCGCGCCCTTNN
A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T A C G T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGAKCGCMCT---
NTCGCGCGCCTTNNN
A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T A C G T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAKCGCMCT
CGGAGC-----
A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GGAKCGCMCT---
NNNGGGGCGCCCCCNN
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGAKCGCMCT----
----NSCACTYVAV
A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------GGAKCGCMCT-
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGAKCGCMCT---
---AASCACTCAA
A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGAKCGCMCT
AGGGGATTCCCCT
A C G T A C G T A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGAKCGCMCT
GGGAGGACNG-
A C G T A C T G A C T G C G T A A C T G A G T C A C T G A G T C G T C A G A T C A C G T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T