Information for 6-ATGGGGTTAAGG (Motif 6)

G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
Reverse Opposite:
T A G C G A T C A C G T C G A T C G T A C G T A T A G C A T G C A G T C G A T C C G T A C A G T
p-value:1e-3
log p-value:-9.006e+00
Information Content per bp:1.623
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif35.71%
Number of Background Sequences with motif2135.0
Percentage of Background Sequences with motif3.83%
Average Position of motif in Targets83.0 +/- 48.3bp
Average Position of motif in Background99.1 +/- 64.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGGGTTAAGG
NMMNBAAAGGGTTAA--
A C G T A C G T A C G T A C G T A C G T G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATGGGGTTAAGG--
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATGGGGTTAAGG
--GGGATTANN-
G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATGGGGTTAAGG
-NGGGATTA---
G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATGGGGTTAAGG-
--AGGGTAACAGC
G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G A C G T
A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PITX1/MA0682.2/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATGGGGTTAAGG
--NGGATTAN--
G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGGGGTTAAGG
AAGGGATTAGAA
G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATGGGGTTAAGG
--NGGATTAN--
G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATGGGGTTAAGG
-VRGGATTARN-
G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATGGGGTTAAGG--
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T G C T A G A C T C A T G C T A G A T C G A T C G C G A T C G A T C G T A T C G A C T A G A C T G A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A