Homer de novo Motif Results (motif_results/SRR15726130//)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 7
Total background sequences = 57000
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 * A C G T A C T G A C T G G T C A G T A C C G T A C G T A C G T A C G T A A G C T G T A C A G T C 1e-6-1.574e+0142.86%0.16%26.5bp (90.1bp)PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer(0.622)
More Information | Similar Motifs Found
motif file (matrix)
2 * C G T A A G T C A G C T T A C G C G A T A C G T G T C A T A C G C T G A G T C A C T A G A G T C 1e-6-1.513e+0157.14%0.94%40.5bp (84.8bp)HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer(0.614)
More Information | Similar Motifs Found
motif file (matrix)
3 * A C T G C G T A T G C A C G T A G T A C A C G T A T G C A C G T C T G A A T C G A C G T C G A T 1e-5-1.263e+0142.86%0.46%33.8bp (86.6bp)GFY(?)/Promoter/Homer(0.572)
More Information | Similar Motifs Found
motif file (matrix)
4 * A G C T A G T C C G A T A C T G A G T C A G T C G T C A C G A T C G T A A G C T A G C T A C T G 1e-4-1.033e+0128.57%0.13%49.8bp (85.2bp)YY1/MA0095.2/Jaspar(0.731)
More Information | Similar Motifs Found
motif file (matrix)
5 * C G T A A C G T A C T G A C T G A G T C A C G T A C T G A C T G C G A T G T C A C G T A A G T C 1e-4-9.936e+0028.57%0.15%55.2bp (84.9bp)PB0060.1_Smad3_1/Jaspar(0.598)
More Information | Similar Motifs Found
motif file (matrix)
6 * A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C T G C G T A A C G T 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)TCF7/MA0769.2/Jaspar(0.633)
More Information | Similar Motifs Found
motif file (matrix)
7 * A C T G A C G T A G T C A C T G A C G T A C G T C G T A A C T G A C T G C G T A 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)HOXA4/MA1496.1/Jaspar(0.660)
More Information | Similar Motifs Found
motif file (matrix)
8 * A G T C A C T G A C G T A G T C A G T C C G T A A C G T A C T G A C T G A G T C 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)YY2/MA0748.2/Jaspar(0.615)
More Information | Similar Motifs Found
motif file (matrix)
9 * C G T A A C T G A G T C A C T G A C T G A G T C C G T A A G T C A C G T A C T G 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer(0.699)
More Information | Similar Motifs Found
motif file (matrix)
10 * A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C T G A G T C A C T G 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer(0.704)
More Information | Similar Motifs Found
motif file (matrix)
11 * A C G T A C G T C G T A C G T A A G T C C G T A A C T G A C G T C G T A A C T G A C T G A C G T 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)ZKSCAN1/MA1585.1/Jaspar(0.792)
More Information | Similar Motifs Found
motif file (matrix)
12 * A G T C A G T C A G T C C G T A A C T G A G T C A C G T A C T G A C T G A C G T A G T C C G T A 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer(0.758)
More Information | Similar Motifs Found
motif file (matrix)
13 * A C T G A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A G T C 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)PRDM1/MA0508.3/Jaspar(0.636)
More Information | Similar Motifs Found
motif file (matrix)
14 * C G T A A C T G A G T C A G T C C G T A C G T A A C G T A G T C A G T C C G T A C G T A A C G T 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)POL004.1_CCAAT-box/Jaspar(0.666)
More Information | Similar Motifs Found
motif file (matrix)
15 * A G T C A G T C A G T C A G T C A G T C C G T A A G T C A C G T A C T G A C G T A C T G A C G T 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)ZIC1/MA0696.1/Jaspar(0.728)
More Information | Similar Motifs Found
motif file (matrix)
16 * A G T C C G T A C G T A C G T A A C T G A C G T C G T A C G T A A C G T C G T A C G T A C G T A 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)HOXA10/MA0899.1/Jaspar(0.730)
More Information | Similar Motifs Found
motif file (matrix)
17 * A C T G A C G T C G T A C G T A C G T A C G T A A C G T A C G T A C G T C G T A C G T A A C T G 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer(0.628)
More Information | Similar Motifs Found
motif file (matrix)
18 * A G T C C G T A C G T A C G T A A C G T A C T G A G T C A G T C C G T A A C G T A C T G A C G T 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)PB0149.1_Myb_2/Jaspar(0.656)
More Information | Similar Motifs Found
motif file (matrix)
19 * C G T A A G T C C G T A A C G T C G T A A C T G A C T G A C T G A C G T A C T G A C G T A G T C 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)TCF21(var.2)/MA1568.1/Jaspar(0.670)
More Information | Similar Motifs Found
motif file (matrix)
20 * C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C A G T C A C G T A C T G 1e-4-9.666e+0014.29%0.00%0.0bp (0.0bp)CDX2/MA0465.2/Jaspar(0.816)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A G T C A C T G 1e-3-8.973e+0014.29%0.00%0.0bp (0.0bp)NR1H4/MA1110.1/Jaspar(0.791)
More Information | Similar Motifs Found
motif file (matrix)
22 * A G T C A C G T A C G T A C G T A C T G A C T G A G T C A C T G A C T G C G T A 1e-3-8.973e+0014.29%0.00%0.0bp (0.0bp)E2F8/MA0865.1/Jaspar(0.695)
More Information | Similar Motifs Found
motif file (matrix)
23 * A C G T C G T A A C G T A C T G A G T C A C G T C G T A A C T G C G T A C G T A A G T C A C G T 1e-3-8.973e+0014.29%0.00%0.0bp (0.0bp)ZBTB12/MA1649.1/Jaspar(0.668)
More Information | Similar Motifs Found
motif file (matrix)
24 * A C T G A C T G A C G T C G T A A C G T A C G T A C T G C G T A A C G T A C G T A G T C A G T C 1e-3-8.973e+0014.29%0.00%0.0bp (0.0bp)Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer(0.739)
More Information | Similar Motifs Found
motif file (matrix)
25 * A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G T A C G T A A C T G 1e-3-8.973e+0014.29%0.00%0.0bp (19.3bp)PB0071.1_Sox4_1/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
26 * A C T G A C T G A C T G A C T G A C T G A C T G A C T G C G T A A C T G C G T A A G T C C G T A 1e-3-8.973e+0014.29%0.00%0.0bp (40.9bp)PB0100.1_Zfp740_1/Jaspar(0.718)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A C G T C G T A A G T C C G T A A C G T A C T G A G T C A C G T A C G T C G T A C G T A 1e-3-8.973e+0014.29%0.00%0.0bp (13.1bp)PH0086.1_Irx5/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
28 * A G T C A C G T A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C T G C G T A C G T A 1e-3-8.973e+0014.29%0.00%0.0bp (9.9bp)TBX20/MA0689.1/Jaspar(0.863)
More Information | Similar Motifs Found
motif file (matrix)
29 * C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A 1e-3-8.973e+0014.29%0.00%0.0bp (47.6bp)PB0104.1_Zscan4_1/Jaspar(0.646)
More Information | Similar Motifs Found
motif file (matrix)
30 * A G T C A C G T A G T C A C T G C G T A A G T C C G T A A C T G C G T A A G T C 1e-3-8.279e+0014.29%0.00%0.0bp (90.0bp)Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer(0.642)
More Information | Similar Motifs Found
motif file (matrix)
31 * C G T A A G T C A C T G A C T G A G T C A G T C C G T A A C T G C G T A A C G T 1e-3-8.056e+0014.29%0.01%0.0bp (10.1bp)PB0193.1_Tcfe2a_2/Jaspar(0.675)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C A C G T A G T C C G T A A G T C A C T G A C T G A C G T A G T C A G T C 1e-3-7.874e+0014.29%0.01%0.0bp (82.1bp)PB0140.1_Irf6_2/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G A C G T C G T A A C T G A C T G A C G T A C G T A G T C A G T C A G T C 1e-3-7.720e+0014.29%0.01%0.0bp (81.0bp)RBPJ/MA1116.1/Jaspar(0.639)
More Information | Similar Motifs Found
motif file (matrix)
34 * A G T C A C T G C G T A A C T G C G T A C G T A C G T A A C T G A C G T A C T G 1e-3-7.720e+0014.29%0.01%0.0bp (82.7bp)PRDM1/MA0508.3/Jaspar(0.810)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C T G A C T G A G T C C G T A A C G T C G T A C G T A A G T C C G T A A C T G 1e-3-7.268e+0014.29%0.01%0.0bp (79.3bp)PB0120.1_Foxj1_2/Jaspar(0.692)
More Information | Similar Motifs Found
motif file (matrix)
36 * A C T G A C T G C G T A A C T G A C T G A C T G A C G T C G T A A C G T C G T A 1e-3-7.101e+0014.29%0.01%0.0bp (63.6bp)PB0167.1_Sox13_2/Jaspar(0.658)
More Information | Similar Motifs Found
motif file (matrix)
37 * A C T G A C T G A C G T A C G T A C T G A G T C C G T A A C G T A G T C A G T C 1e-3-7.101e+0014.29%0.01%0.0bp (73.4bp)Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer(0.716)
More Information | Similar Motifs Found
motif file (matrix)
38 * A C T G C G T A A C T G C G T A A G T C A C G T C G T A A C T G A C G T A G T C 1e-3-7.101e+0014.29%0.01%0.0bp (93.2bp)GATA1/MA0035.4/Jaspar(0.612)
More Information | Similar Motifs Found
motif file (matrix)
39 * C G T A A G T C A C G T A C G T C G T A C G T A A G T C A G T C A G T C A G T C 1e-3-7.101e+0014.29%0.01%0.0bp (69.7bp)ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer(0.754)
More Information | Similar Motifs Found
motif file (matrix)
40 * A C G T C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A G T C 1e-3-6.958e+0014.29%0.01%0.0bp (65.4bp)NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer(0.649)
More Information | Similar Motifs Found
motif file (matrix)
41 * A C G T A C T G A C T G A C G T A C G T C G T A A C T G A G T C A G T C A G T C 1e-3-6.958e+0014.29%0.01%0.0bp (82.6bp)HMBOX1/MA0895.1/Jaspar(0.629)
More Information | Similar Motifs Found
motif file (matrix)
42 * C G T A A C G T A C G T C G T A A C T G C G T A A C G T A C G T C G T A A G T C 1e-2-6.833e+0014.29%0.02%0.0bp (73.3bp)PHOX2A/MA0713.1/Jaspar(0.771)
More Information | Similar Motifs Found
motif file (matrix)
43 * A C G T A C T G A C T G A C T G A G T C C G T A A G T C A C G T C G T A C G T A 1e-2-6.833e+0014.29%0.02%0.0bp (104.1bp)ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer(0.796)
More Information | Similar Motifs Found
motif file (matrix)
44 * A C G T C G T A C G T A A C G T A C T G A C G T A G T C A C T G 1e-2-5.493e+0014.29%0.06%0.0bp (67.2bp)NKX6-3/MA1530.1/Jaspar(0.696)
More Information | Similar Motifs Found
motif file (matrix)