Information for 25-GTTGTATTAACC (Motif 25)

A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C
p-value:1e-3
log p-value:-9.057e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background141.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GTTGTATTAACC---------
------TTAACCCTTTVNKKN
A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

PB0001.1_Arid3a_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTATTAACC--
NNNTTTTAATTAANNNN
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0075.1_Hoxd10/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTTGTATTAACC-
NTNAATTTTATTGNATT
A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTTGTATTAACC
AATGTATCAAT-
A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PB0109.1_Bbx_2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTTGTATTAACC----
NNNNCTGTTAACNNTNN
A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTATTAACC-
NNANTTTTATTGGNNN
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GTTGTATTAACC--
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PH0013.1_Cdx2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTATTAACC--
NAATTTTATTACCNNN
A C G T A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

CDX4/MA1473.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTTGTATTAACC
GTTTTATTGCC-
A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTATTAACC--
NAATTTTATTACCTNN
A C G T A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C G T A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A