Information for 14-AGTCGTGAAATG (Motif 18)

C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.387e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets91.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC12/MA0906.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGTCGTGAAATG
GGTCGTAAAAA-
C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGTCGTGAAATG
-GTCGTAAAAT-
C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G
A C G T T C A G A G C T A G T C T C A G A C G T G C T A C G T A G T C A G C T A G A C T A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGTCGTGAAATG
GGTCGTAAAAT-
C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G
C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T A C G T

HOXC9/MA0485.2/Jaspar

Match Rank:4
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AGTCGTGAAATG
-GTCGTAAAAT-
C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G
A C G T T C A G A G C T A G T C C T A G A C G T C G T A C G T A G T C A G C T A G A C T A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGTCGTGAAATG
AGTCGTAAAAA-
C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A A C G T

PH0076.1_Hoxd11/Jaspar

Match Rank:6
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGAAATG--
TAAGGTCGTAAAATCCT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G A C G T A C G T
G A C T G C T A C T G A T C A G T C A G A G C T G A T C C T A G A C G T C G T A C G T A G C T A G C T A G C A T G A T C G A T C C A G T

PH0066.1_Hoxc11/Jaspar

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGAAATG-
TAAAGTCGTAAAATAG
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

PH0047.1_Hoxa11/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGAAATG-
TAAAGTCGTAAAACAT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

HOXD10/MA1506.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AGTCGTGAAATG
GGTCGTAAAAC-
C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G
T C A G T C A G A G C T G T A C T C A G A C G T C G T A C G T A G T C A G C T A G A T C A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:10
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AGTCGTGAAATG--
CAAGGTCGTAAAATCTT
A C G T A C G T A C G T C G T A A C T G A C G T A G T C A C T G A C G T A C T G C G T A C G T A C G T A A C G T A C T G A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T