Information for 11-GCCTTTCTGACA (Motif 14)

A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C
p-value:1e-4
log p-value:-9.624e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background104.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GCCTTTCTGACA-
------TTGACAG
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCCTTTCTGACA
VCCTCTCTGDDY
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCTTTCTGACA---
--CTGTCTGTCACCT
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:forward strand
Alignment:GCCTTTCTGACA--
------YTGWCADY
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCCTTTCTGACA
NNGCACCTTTCTCC--
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCCTTTCTGACA--
----VGCTGWCAVB
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GCCTTTCTGACA---
---TGTCTGDCACCT
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PRDM1/MA0508.3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCCTTTCTGACA
TTCTTTCTCTT-
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCCTTTCTGACA
----ARNTGACA
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GCCTTTCTGACA--
------TTGACAGG
A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G