Information for 11-CCTAGCACCTCT (Motif 12)

A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C T G A C G T A C T G A G T C A C G T C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.828e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets170.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CCTAGCACCTCT
-TTVACACCTH-
A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCTAGCACCTCT
--TGACACCT--
A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCTAGCACCTCT---
--CAGCACCTGTCCC
A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C G T A T A C G T A G C C T G A A T G C T A G C A G C T A T C G A G C T A G T C G T A C A G T C

TBX6/MA1567.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTAGCACCTCT
-TTCACACCTN-
A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
A C G T G C A T G A C T T G A C C T G A G A T C C T G A A T G C A T G C G A C T G A T C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTAGCACCTCT
SCCTAGCAACAG-
A C G T A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

SNAI2/MA0745.2/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTAGCACCTCT---
--ATGCACCTGTCAT
A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A G C T T C A G G A T C C T G A A T G C A T G C A G C T T A C G A G C T G T A C T C G A A G C T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTAGCACCTCT
--TCACACCT--
A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCTAGCACCTCT
TACCATAGCAACGGT
A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCTAGCACCTCT
--TCACACCT--
A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CCTAGCACCTCT
TGTTKCCTAGCAACM--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C C G T A A G T C A G T C A C G T A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T