Information for 12-GCCCATCATT (Motif 30)

A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G C G T A A C G T A C T G A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.545e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background64.6 +/- 68.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCCATCATT-----
TCACCCATCAATAAACA
A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCCATCATT
AGCCAATCAGA
A C G T A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCCCATCATT--
--NNCTCATTAT
A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

NFYA/MA0060.3/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCCATCATT
AACCAATCAGA
A C G T A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A

HOXB4/MA1499.1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCCCATCATT--
----ATCATTAG
A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCCATCATT-----
TATCATAATTAAGGA
A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

HOXA4/MA1496.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCCCATCATT--
----GTCATTAG
A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G

HOXC4/MA1504.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCCCATCATT--
----GTCATTAA
A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A

HOXD4/MA1507.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCCCATCATT--
----ATCATTAG
A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A C T A G

ZNF449/MA1656.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCCCATCATT
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C G T A G T C C G T A A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G