Information for 1-GTAGAAAC (Motif 4)

A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A G T C A G C T G T C A A G T C
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.923
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif1071.2
Percentage of Background Sequences with motif1.23%
Average Position of motif in Targets127.0 +/- 31.1bp
Average Position of motif in Background95.5 +/- 84.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM4/MA1647.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTAGAAAC----
-NAGAAACAGNN
A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GTAGAAAC-
NTAGCAACG
A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTAGAAAC-
AATGGAAAAT
A C G T A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTAGAAAC-
NATGGAAAAN
A C G T A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

NFATC4/MA1525.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTAGAAAC-
AATGGAAAAT
A C G T A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GTAGAAAC---
CCGCATAGCAACGGA
A C G T A C G T A C G T A C G T A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTAGAAAC--
ACTGAAACCA
A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0034.1_Irf4_1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTAGAAAC----
CGTATCGAAACCAAA
A C G T A C G T A C G T A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

PB0036.1_Irf6_1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTAGAAAC------
CTGATCGAAACCAAAGT
A C G T A C G T A C G T A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GTAGAAAC--
SCCTAGCAACAG
A C G T A C G T A C T G A C G T C T G A A C T G C G T A C G T A C G T A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G