Information for 25-TTTTTAGATTTA (Motif 25)

A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A A C G T A G T C A C G T C G T A C G T A C G T A C G T A C G T A
p-value:1e-4
log p-value:-9.617e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets171.0 +/- 0.0bp
Average Position of motif in Background118.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0019.1_Foxl1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTAGATTTA
NNNTTTGTTTACATTTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

MEF2A/MA0052.4/Jaspar

Match Rank:2
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TTTTTAGATTTA
NNTCTATTTTTAGNN---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A A C G T A C G T A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTAGATTTA
NNNTTTGTTTACATTTN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTTAGATTTA--
NTTATTGATTTTTT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

Foxl2/MA1607.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTAGATTTA
NNTGTTTACATANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T

ONECUT1/MA0679.2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTAGATTTA--
NNTTTATTGATTTTTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTTTTAGATTTA--
ATTATCGATTTTTT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PB0148.1_Mtf1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTTTAGATTTA
NNTTTTTCTTATNT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTAGATTTA
TTCTATTTTTAGNNN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTTTTAGATTTA-----
--AAATGATTTATGGCT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T