Information for 2-CGATTTTC (Motif 13)

A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C
Reverse Opposite:
A C T G G T C A C T G A C G T A G T C A A C G T A G T C A C T G
p-value:1e-8
log p-value:-1.847e+01
Information Content per bp:1.824
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.62%
Number of Background Sequences with motif740.7
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets81.3 +/- 56.6bp
Average Position of motif in Background95.8 +/- 54.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0136.1_IRC900814_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGATTTTC---
TTTTACGACTTTCCAT
A C G T A C G T A C G T A C G T A C G T A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CGATTTTC-
ATTATCGATTTTTT
A C G T A C G T A C G T A C G T A C G T A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGATTTTC--
---TTTTCCA
A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T A C G T
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGATTTTC----
--ATTTTCCATT
A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGATTTTC--
CTATTTTTGG
A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T A C G T
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGATTTTC----
--ATTTTCCATT
A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

ONECUT3/MA0757.1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGATTTTC-
NTTATTGATTTTTT
A C G T A C G T A C G T A C G T A C G T A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T

DPRX/MA1480.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGATTTTC-
NGGATTATCT
A C G T A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T
T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGATTTTC----
--ATTTTCCATT
A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFATC4/MA1525.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CGATTTTC----
--ATTTTCCATN
A G T C C T A G G T C A A C G T C G A T A G C T A C G T G T A C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T