Information for 25-ACCAATTATATA (Motif 36)

C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T C G T A A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T
p-value:1e-1
log p-value:-2.495e+00
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif92.31%
Number of Background Sequences with motif51288.0
Percentage of Background Sequences with motif71.82%
Average Position of motif in Targets112.6 +/- 46.6bp
Average Position of motif in Background100.2 +/- 78.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LHX2/MA0700.2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-ACCAATTATATA
AACCAATTAAT--
A C G T C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ACCAATTATATA
ACCAATTA----
C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ACCAATTATATA
-CCAATTAA---
C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACCAATTATATA-
GAAGACCAATTAGCGCT
A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

MSX1/MA0666.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACCAATTATATA
-CCAATTAG---
C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACCAATTATATA
CAAAACCAATTAATTT
A C G T A C G T A C G T A C G T C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ACCAATTATATA
-CCAATTAA---
C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T

Dlx4/MA0881.1/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCAATTATATA
-CCAATTAC---
C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T

DLX5/MA1476.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACCAATTATATA
-GCAATTAC---
C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
A C G T T A C G G A T C T G C A C G T A A C G T A C G T C G T A A G T C A C G T A C G T A C G T

Dlx3/MA0880.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ACCAATTATATA
-CCAATTAC---
C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T C G T A A C G T C G T A
A C G T T A G C G A T C G T C A G T C A G C A T A G C T G C T A G T A C A C G T A C G T A C G T