Information for 1-ACTTGAGGCCTH (Motif 1)

C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A
Reverse Opposite:
C A G T C T G A A C T G A C T G A T G C A G T C A C G T G T A C G T C A C G T A A T C G A C G T
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.806
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif26.67%
Number of Background Sequences with motif161.2
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets75.6 +/- 56.8bp
Average Position of motif in Background108.6 +/- 71.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.71
Offset:5
Orientation:forward strand
Alignment:ACTTGAGGCCTH-
-----AGGCCTNG
C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.69
Offset:5
Orientation:forward strand
Alignment:ACTTGAGGCCTH-
-----AGGCCTAG
C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A A C G T
A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZBTB6/MA1581.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--ACTTGAGGCCTH
GTCCTTGAGCCCG-
A C G T A C G T C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A
C A T G A G C T T A G C G T A C A G C T C A G T T A C G G T C A T C A G G T A C G A T C T G A C T A C G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:ACTTGAGGCCTH------
----CAGGCCNNGGCCNN
C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACTTGAGGCCTH
CCACTTGAA-----
A C G T A C G T C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGAGGCCTH---
NNANTTGACCCCTNNNN
A C G T A C G T C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACTTGAGGCCTH
-HAWGRGGCCM-
C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A
A C G T G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ACTTGAGGCCTH
ACCACTTGAA-----
A C G T A C G T A C G T C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTTGAGGCCTH
RSCACTYRAG-----
A C G T A C G T A C G T C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACTTGAGGCCTH
TGWAAYCTGABACCB-
A C G T A C G T A C G T A C G T C G T A A T G C A C G T A C G T A C T G C G T A A C T G A T C G G T A C A G T C A G C T G C T A
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G A C G T