| p-value: | 1e-5 |
| log p-value: | -1.300e+01 |
| Information Content per bp: | 1.931 |
| Number of Target Sequences with motif | 36.0 |
| Percentage of Target Sequences with motif | 4.19% |
| Number of Background Sequences with motif | 840.4 |
| Percentage of Background Sequences with motif | 1.75% |
| Average Position of motif in Targets | 100.8 +/- 61.6bp |
| Average Position of motif in Background | 99.6 +/- 58.2bp |
| Strand Bias (log2 ratio + to - strand density) | 0.9 |
| Multiplicity (# of sites on avg that occur together) | 1.06 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.79 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTTAGCAT- BTVATTWGCATA |
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Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.72 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTTAGCAT- CTCATTTGCATW |
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NFIC/MA0161.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTTAGCAT- TACTTGGCAGA |
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|
POU3F4/MA0789.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTAGCAT- ATTTGCATA |
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|
|
POU5F1/MA1115.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTTAGCAT-- NATTTGCATNN |
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|
|
POU5F1B/MA0792.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTAGCAT- ATTTGCATA |
|
|
|
POU3F1/MA0786.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTTAGCAT-- TAATTTGCATAA |
|
|
|
POU3F2/MA0787.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CTTAGCAT-- TAATTTGCATAA |
|
|
|
POU2F1/MA0785.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTTAGCAT--- AATTTGCATANT |
|
|
|
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 10 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTTAGCAT-- ATTTGCATAA |
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