Information for 25-ATTTATTGCATT (Motif 24)

C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C G T C G T A C G T A C G T A A C G T
p-value:1e-3
log p-value:-8.792e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.0 +/- 0.0bp
Average Position of motif in Background91.5 +/- 161.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX2/MA0465.2/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGCATT
NTTTTATTGCNN-
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T A C G T

HOXD9/MA0913.2/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGCATT
NTTTTATTGC---
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C T A G C A G T A C G T C G A T C G A T C G T A A G C T C A G T T C A G A G T C A C G T A C G T A C G T

CDX4/MA1473.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGCATT
GTTTTATTGCC--
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
T C A G C A G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G T C G T A C A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATTTATTGCATT----
NNNTATTGAATTGNNN
C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGCATT
GTTTTATGGCC--
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ATTTATTGCATT
NTNAATTTTATTGNATT
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---ATTTATTGCATT-
NAATTTTATTACCNNN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGCATT
NTTTTATGAC---
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ATTTATTGCATT
TGATTTATGGCC--
A C G T A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C A C G T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATTTATTGCATT
NTTTTATTACN--
A C G T C G T A A C G T A C G T A C G T C G T A A C G T A C G T A C T G A G T C C G T A A C G T A C G T
C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T