Information for 2-CRTGWTSTAKRA (Motif 2)

A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C G T C A A C G T C G T A A T G C C G T A C G T A A G T C C G T A G A C T A C T G
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.832
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif37.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets64.0 +/- 20.1bp
Average Position of motif in Background98.9 +/- 79.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0090.1_Zbtb12_1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CRTGWTSTAKRA------
-NNGATCTAGAACCTNNN
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CRTGWTSTAKRA-
NNTGATTTATGNN
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CRTGWTSTAKRA--
BCNGGTTCTAGANCN
A C G T A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CRTGWTSTAKRA--
AAATGATTTATGGCT
A C G T A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CRTGWTSTAKRA-
-ATGATKGATGRC
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CRTGWTSTAKRA-
-RTGATTKATRGN
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T
A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CRTGWTSTAKRA-
NNTGATTGATGNN
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CRTGWTSTAKRA
--TGATKGATGR
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A
A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

ZBTB12/MA1649.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CRTGWTSTAKRA
-NNGTTCCAGNN
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A
A C G T T C A G C A T G C T A G G A C T A C G T G T A C A G T C T C G A A T C G T C G A A G C T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CRTGWTSTAKRA--
--TGATTTATGGCC
A G T C C T A G A C G T C T A G C G A T A C G T A T C G A C G T C G T A A C G T C T A G C G T A A C G T A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C