Information for 3-GGTATADVCAAA (Motif 3)

A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
Reverse Opposite:
C G A T A C G T C G A T A C T G A C T G G T C A C G A T G T C A A C G T C T G A A G T C A G T C
p-value:1e-5
log p-value:-1.209e+01
Information Content per bp:1.740
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif2216.9
Percentage of Background Sequences with motif2.68%
Average Position of motif in Targets88.5 +/- 39.8bp
Average Position of motif in Background99.3 +/- 92.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGTATADVCAAA
NGTGGGCAT-------
A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGTATADVCAAA-
---ATATGCAAAT
A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A A C G T
A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

PH0137.1_Pitx1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGTATADVCAAA
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGTATADVCAAA
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGTATADVCAAA
TGGAATGTACCA-
A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGTATADVCAAA
GGTTGGCAT-------
A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGTATADVCAAA
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0123.1_Obox3/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGTATADVCAAA
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGTATADVCAAA--
CCGTATTATAAACAA
A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

PH0121.1_Obox1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGTATADVCAAA
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T C G T A A C G T C G T A C A G T T G A C G T A C C G T A G T C A C G T A
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C