Information for 7-GKTGYYKRSWWT (Motif 6)

A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T
Reverse Opposite:
C G T A G C A T C G T A A T G C A G C T G T C A C T G A C T G A A G T C C G T A G T C A A G T C
p-value:1e-4
log p-value:-9.431e+00
Information Content per bp:1.754
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif596.9
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets95.0 +/- 41.5bp
Average Position of motif in Background100.1 +/- 82.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GKTGYYKRSWWT
--TGTTTACTTT
A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GKTGYYKRSWWT
CBTGTTTAYAWW
A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GKTGYYKRSWWT
GCGGAGGTGTCGCCTC-
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

PB0018.1_Foxk1_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GKTGYYKRSWWT--
NNNTTTGTTTACATTTN
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GKTGYYKRSWWT
--TGTTTACTTT
A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GKTGYYKRSWWT
CNTGTTTACATA
A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GKTGYYKRSWWT--
NNNTTTGTTTACATTTN
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GKTGYYKRSWWT----
-CTGCCWVCTTTTRTA
A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A

Foxl2/MA1607.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GKTGYYKRSWWT--
NNTGTTTACATANN
A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T A C G T A C G T
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GKTGYYKRSWWT--
BSNTGTTTACWYWGN
A C G T A C T G A C G T A C G T A C T G A G C T A G C T A C G T C T G A A T C G C G A T C G T A A C G T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G