Information for 13-TCTCTAGTKGAT (Motif 16)

A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C G T C A C G T A A G T C A C G T C G T A A T C G C G T A A C T G C T G A
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.918
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets80.4 +/- 38.6bp
Average Position of motif in Background66.6 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCTCTAGTKGAT--
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTAGTKGAT--
AATTTCAAGTGGCTTN
A C G T A C G T A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTAGTKGAT--
AANTTCAAGTGGCTTN
A C G T A C G T A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TCTCTAGTKGAT--
----TAATTGATTA
A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PH0115.1_Nkx2-6/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTAGTKGAT--
AATNTTAAGTGGNTNN
A C G T A C G T A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTCTAGTKGAT--
AAATTCAAGTGGNTTN
A C G T A C G T A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TCTCTAGTKGAT
------GTGGAT
A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTCTAGTKGAT---
---NNTGTGGATTSS
A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCTCTAGTKGAT
-NTCAAGTGG--
A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TCTCTAGTKGAT--
----TAATCGATTA
A G C T A G T C A C G T A T G C A C G T C G T A A C T G C G A T A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A