Information for 25-ATGGACACATAA (Motif 29)

C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C G T A C T G A C G T A C T G A C G T A G T C A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.973e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 0.0bp
Average Position of motif in Background119.1 +/- 47.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATGGACACATAA--
TACATGTGCACATAAAA
A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATGGACACATAA--
CAGATGTGCACATACGT
A C G T A C G T A C G T C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

DMRTC2/MA1479.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATGGACACATAA
AATTGATACATT-
A C G T C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGGACACATAA
TTATGTACTAATAA
A C G T A C G T C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGGACACATAA-
AGATGKDGAGATAAG
A C G T A C G T C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

FOXA1/MA0148.4/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGGACACATAA
ATGTAAACATGT
C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATGGACACATAA
AATGGAAAAT---
A C G T C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

USF2/MA0526.3/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGGACACATAA---
-NNGTCACATGACNN
C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGGACACATAA
NTTGATACATT-
C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T A C G T

USF1/MA0093.3/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATGGACACATAA---
-NNGTCACATGACNN
C G T A A C G T A C T G A C T G C G T A A G T C C G T A A G T C C G T A A C G T C G T A C G T A A C G T A C G T A C G T
A C G T C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A