Information for 20-GCATAGAATACT (Motif 22)

A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C G T C G T A A C G T A C T G A G T C
p-value:1e-4
log p-value:-9.557e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 0.0bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCATAGAATACT
ATTTGCATACAATGG-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G A C G T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GCATAGAATACT--------
TGCCNACCWAGAATACTDTATCMAR
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C A T G G A T C G T A C G A T C C T G A A T G C G A T C C G T A C T G A C T A G T G C A T G C A A C G T C G T A A G T C G A C T C G A T C G A T T C G A G A C T G A T C T G A C C G T A C T A G

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCATAGAATACT------
-CATACAATACGAAATAA
A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

ZNF136/MA1588.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GCATAGAATACT
GTCAACCAAGAATTC-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCATAGAATACT
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCATAGAATACT-----
ACTCCAAGTACTTGGAA
A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GCATAGAATACT
-CCAAAAATAG-
A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.51
Offset:-7
Orientation:forward strand
Alignment:-------GCATAGAATACT
AAAATATGCATAATAAA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GCATAGAATACT
GCAGTGATTT--
A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GCATAGAATACT
AGAGCCATAAAATTCG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T C G T A A C T G C G T A C G T A A C G T C G T A A G T C A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G