Information for 13-CTATGTTATATG (Motif 16)

A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T C G T A A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G
p-value:1e-3
log p-value:-9.177e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background183.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTTATATG-
NCNTTTGTTATTTNN
A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTATGTTATATG--
-NNTGATTTATGNN
A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T
A C G T C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

SOX10/MA0442.2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTTATATG
NNCTTTGTTNN---
A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T A C G T A C G T A C G T

GATA6/MA1104.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTATGTTATATG-
TTATCTTATCTTT
A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T
G C A T G C A T G C T A A G C T A T G C G C A T G C A T C G T A G C A T G A T C G C A T G A C T G C A T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTATGTTATATG---
AAATGATTTATGGCT
A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTATGTTATATG
-NNTCTTATCT-
A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G
A C G T A C T G T C G A A C G T A G T C A G C T C G A T C G T A A C G T A G T C C G A T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGTTATATG
NNNTCCTTTGTTCTNNN
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CTATGTTATATG
TNNTCCTTTGTTCTNNT
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTATGTTATATG
TNTTATCTTATCTT
A C G T A C G T A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

PB0105.1_Arid3a_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTATGTTATATG---
NNATNTGATANNNNN
A G T C A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C G T C G T A A C G T A C T G A C G T A C G T A C G T
G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T