Information for 13-GTATTATTGGTG (Motif 15)

A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C C G T A C G T A A C G T C G T A C G T A A C G T C G T A A G T C
p-value:1e-3
log p-value:-9.041e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.2/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTATTATTGGTG
GTTTTATTGGN-
A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T

HOXD13/MA0909.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GTATTATTGGTG
GTTTTATTGGG-
A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTATTATTGGTG
NNATTTTATTGGNN
A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTATTATTGGTG-
NNANTTTTATTGGNNN
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTATTATTGGTG-
NNAATTTTATTGGNTN
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTATTATTGGTG
-TTTTATKRGG-
A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T

ZNF136/MA1588.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTATTATTGGTG---
GAATTCTTGGTTGAC
A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G A C G T A C G T A C G T
T C A G C G T A T C G A C G A T A G C T G A T C A G C T C A G T C T A G C T A G G A C T C A G T C T A G C T G A G T A C

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTATTATTGGTG
-TTTTATTRGN-
A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTATTATTGGTG
-AATTATT----
A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTATTATTGGTG
-NCTGATTGGNN
A C T G A C G T C G T A A C G T A C G T C G T A A C G T A C G T A C T G A C T G A C G T A C T G
A C G T A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T