Information for 6-GATTGAAAATTA (Motif 7)

A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A G T C
p-value:1e-3
log p-value:-9.118e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.0 +/- 0.0bp
Average Position of motif in Background170.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT5/MA0606.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GATTGAAAATTA
NATGGAAAAN--
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATTGAAAATTA
AATGGAAAAT--
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GATTGAAAATTA-
GGTTAAACATTAA
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C G T
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GATTGAAAATTA
NATTCAAAT---
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GATTGAAAATTA
CGGTTTCAAA----
A C G T A C G T A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GATTGAAAATTA--
----CCTAATTATC
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

NFATC4/MA1525.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GATTGAAAATTA
AATGGAAAAT--
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GATTGAAAATTA-----
GATTATTAATTAACTTG
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G

RAX/MA0718.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GATTGAAAATTA--
----GCCAATTAAC
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GATTGAAAATTA
AATGGAAAAT--
A C T G C G T A A C G T A C G T A C T G C G T A C G T A C G T A C G T A A C G T A C G T C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T