Information for 12-CTAATAGGTA (Motif 32)

A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.145e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background74.1 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VENTX/MA0724.1/Jaspar

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CTAATAGGTA
CTAATCGNT-
A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T A C G T

Isl1/MA1608.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTAATAGGTA
NNCTAATGGNN-
A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTAATAGGTA
NNTAATTGGNN
A C G T A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T

PH0107.1_Msx2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTAATAGGTA---
ANCGCTAATTGGTCTNN
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
T C G A C T A G G T A C C T A G G T A C G A C T C G T A C G T A A C G T C G A T C T A G T A C G G A C T A T G C G A C T A C G T A G T C

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTAATAGGTA--
CCTTAATNGNTTTT
A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

BSX/MA0876.1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAATAGGTA
NTAATTGG--
A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTAATAGGTA
NTAATTGN--
A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTAATAGGTA
-TAATTGGT-
A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
A C G T A G C T C G T A C G T A A C G T C A G T C T A G A T C G A G C T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTAATAGGTA
CTAATKGV--
A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A
A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T A C G T

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTAATAGGTA--
ACNNCTAATTAGNNNN
A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C G T A C G T
G C T A A T G C T A C G T G C A G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C T G C T G A A C T G C G A T