| p-value: | 1e-4 |
| log p-value: | -9.570e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 3.0 |
| Percentage of Target Sequences with motif | 0.33% |
| Number of Background Sequences with motif | 4.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 93.2 +/- 45.4bp |
| Average Position of motif in Background | 83.0 +/- 31.1bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAAGAATATTCT -ATGAATATTC- |
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|
SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TAAGAATATTCT -AAGGATATNTN |
|
|
|
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | TAAGAATATTCT -ATGMATATDC- |
|
|
|
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | TAAGAATATTCT---- -TAGAANVTTCTAGAA |
|
|
|
HSF1/MA0486.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TAAGAATATTCT---- ---GAACGTTCTAGAA |
|
|
|
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAAGAATATTCT- CTCATGAATATTCAT |
|
|
|
Arid5a/MA0602.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAAGAATATTCT NNTNNCAATATTAG |
|
|
|
PB0002.1_Arid5a_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAAGAATATTCT NNTNNCAATATTAG |
|
|
|
HSF4/MA0771.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TAAGAATATTCT---- ---GAANNTTCTAGAA |
|
|
|
HSF2/MA0770.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | TAAGAATATTCT---- ---GAANGTTCTAGAA |
|
|
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