Information for 16-AATAATGTAATT (Motif 22)

C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C G T
p-value:1e-3
log p-value:-8.900e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background163.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PHOX2A/MA0713.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:forward strand
Alignment:AATAATGTAATT-
--TAATTTAATTA
C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AATAATGTAATT-
--TAATTTAATTA
C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:AATAATGTAATT-
-NTAATBNAATTA
C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AATAATGTAATT--
--TAATYNRATTAR
C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Phox2b(Homeobox)/CLBGA-PHOX2B-ChIP-Seq(GSE90683)/Homer

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AATAATGTAATT--
--TAATTNAATTAA
C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A C G T A G C T A C G T C T G A C G T A A C G T A C G T C G T A G C T A

PHOX2B/MA0681.2/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AATAATGTAATT---
NNATAATTTGATTANN
A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

NFIL3/MA0025.2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AATAATGTAATT-
TATTATGCAATAT
C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

Sox1/MA0870.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AATAATGTAATT---
AACAATGNTATTGTT
C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AATAATGTAATT
AAGATGATGTCAT-
A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T A C G T

ATF4/MA0833.2/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AATAATGTAATT-
AAATGATGCAATAA
A C G T C G T A C G T A A C G T C G T A C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A