Information for 2-CTCCTCKAYAAT (Motif 2)

A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T
Reverse Opposite:
C G T A A C G T A C G T C T A G A C G T G T A C A C T G C G T A T C A G T C A G C G T A A C T G
p-value:1e-5
log p-value:-1.236e+01
Information Content per bp:1.808
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif344.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets52.5 +/- 25.9bp
Average Position of motif in Background103.1 +/- 87.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0175.1_Sox4_2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCCTCKAYAAT------
-TNCNNAACAATTTTTNC
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTCCTCKAYAAT---
------GACAATGNN
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTCCTCKAYAAT
---GTAAACAAT
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T
A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCCTCKAYAAT---
-NNCNNAACAATTNT
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T A C G T
A C G T G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCCTCKAYAAT
------AACAAT
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCCTCKAYAAT-----
--CTCACACAATGGCGC
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

SOX15/MA1152.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTCCTCKAYAAT--
----AAAACAATAG
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCCTCKAYAAT--
----RNAACAATGG
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CTCCTCKAYAAT--
------RACAAWGG
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCCTCKAYAAT-------
--NNTNNACAATGGGANNN
A G T C A C G T A G T C A G T C A C G T G T A C A C T G C G T A A G T C C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A