Information for 1-GCTACCAGCCAA (Motif 1)

A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G A C T G A G T C A C G T A C T G A C T G A C G T C G T A A C T G A G T C
p-value:1e-21
log p-value:-4.856e+01
Information Content per bp:1.949
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets79.6 +/- 37.1bp
Average Position of motif in Background107.5 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCTACCAGCCAA
ACATGCTACCTAATAC
A C G T A C G T A C G T A C G T A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GCTACCAGCCAA
----BCAGACWA
A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCTACCAGCCAA
TGGCAGNCTGCCAG
A C G T A C G T A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GCTACCAGCCAA
ACTTGCTACCTACACC
A C G T A C G T A C G T A C G T A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCTACCAGCCAA
TGGCACCATGCCAA
A C G T A C G T A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTACCAGCCAA-----
--TCCCAGMCRAGCCCC
A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZBTB7B/MA0694.1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTACCAGCCAA
GCGACCACCGAA
A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

NFIC(var.2)/MA1527.1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCTACCAGCCAA-
NTTGGCACNNNGCCAAN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
T A C G G A C T A C G T A C T G A T C G A G T C C T G A A G T C A T G C T C A G G A C T A C T G A T G C A G T C G T C A C T G A T A G C

NFIX(var.2)/MA1528.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTACCAGCCAA-
NNTGGCACNNTGCCAAN
A C G T A C G T A C G T A C G T A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
T A G C G A T C C A G T A C T G A C T G G T A C C T G A G T A C T A G C T C A G G A C T C A T G A G T C A G T C T G C A C G T A T A G C

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCTACCAGCCAA-
TTGGCANNNTGCCAAG
A C G T A C G T A C G T A C T G A G T C A C G T G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A C G T A A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G