Information for 2-GTGTAGGT (Motif 25)

A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G A T C T G A G T A C C G T A G T A C
p-value:1e-3
log p-value:-7.668e+00
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif2567.1
Percentage of Background Sequences with motif5.34%
Average Position of motif in Targets119.2 +/- 51.4bp
Average Position of motif in Background100.8 +/- 73.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN1/MA1585.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTGTAGGT-
ATAGTAGGTG
A C G T A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

IRF6/MA1509.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGTAGGT
AGTTTCGGT
A C G T A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T
C T G A A T C G G A C T G C A T C G A T G A T C T A C G C T A G A G C T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGTAGGT----
SDGCAGGTGCNS
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF3/MA0522.3/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTGTAGGT---
NNGCAGGTGNN
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

SNAI1/MA1558.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGTAGGT---
-GGCAGGTGCA
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTGTAGGT---
NNGCAGGTGNN
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

ZEB1/MA0103.3/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTGTAGGT---
NNGCAGGTGNN
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGTAGGT----
GNMCAGGTGTGC
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGTAGGT---
-NNCAGGTGNN
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTGTAGGT----
--VCAGGTRDRY
A C T G C G A T C A T G A G C T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C