Information for 6-RGKGSRKAATRG (Motif 8)

C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G
Reverse Opposite:
A G T C A G C T C G T A A C G T A C G T G T A C A G C T A T C G A G T C G T C A A T G C A G T C
p-value:1e-4
log p-value:-1.017e+01
Information Content per bp:1.809
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif83.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets117.0 +/- 77.2bp
Average Position of motif in Background92.9 +/- 65.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF140/MA1589.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--RGKGSRKAATRG-------
TAGGAGTGGAATTGCTGGGTC
A C G T A C G T C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T G A C A T G C T A G T C G A C T A G A G C T C T A G C A T G C G T A T C G A A G C T C G A T T C A G G A T C G C A T C T A G C T A G C T A G A G C T G A T C

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RGKGSRKAATRG-----
NNTNNACAATGGGANNN
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Isl1/MA1608.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RGKGSRKAATRG--
---NNCTAATGGNN
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

RELB/MA1117.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RGKGSRKAATRG
-NNGGGGAATNC
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G
A C G T A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C

BARX1/MA0875.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:RGKGSRKAATRG-
-----NTAATTGN
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:RGKGSRKAATRG
----GKTAATGR
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G
A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:RGKGSRKAATRG
VVRRAACAATGG
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G
T G A C T A G C T C A G T C G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T A C G

HOXD8/MA0910.2/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RGKGSRKAATRG-
-----GTAATTGC
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C

BSX/MA0876.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RGKGSRKAATRG-
-----NTAATTGG
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A C G T A A G C T A C G T C T A G A T C G

HOXA7/MA1498.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:RGKGSRKAATRG-
-----GTAATTGC
C T A G A T C G A C G T A C T G A T G C C T G A A C T G C G T A C G T A A C G T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T G T C A C G T A C G A T A C G T T C A G T A G C