| p-value: | 1e-6 |
| log p-value: | -1.556e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 5.0 |
| Percentage of Target Sequences with motif | 0.27% |
| Number of Background Sequences with motif | 3.2 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 112.3 +/- 28.9bp |
| Average Position of motif in Background | 105.7 +/- 21.1bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 2.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 1 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCCTAGAAACCC SCCTAGCAACAG |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAGAAACCC- TACCATAGCAACGGT |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------CCCTAGAAACCC----- TGTGACCCTTAGCAACCGATTAA |
|
|
|
RFX1/MA0509.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCCTAGAAACCC TNCCATAGCAACNN |
|
|
|
PB0056.1_Rfxdc2_1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAGAAACCC- CCGCATAGCAACGGA |
|
|
|
RFX3/MA0798.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --CCCTAGAAACCC TNCCATAGCAACNN |
|
|
|
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CCCTAGAAACCC TGTTKCCTAGCAACM- |
|
|
|
PB0159.1_Rfx4_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CCCTAGAAACCC- TACCCTAGTTACCGA |
|
|
|
BCL6/MA0463.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CCCTAGAAACCC- NATTCCTCGAAAGCAN |
|
|
|
HOXD13/MA0909.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CCCTAGAAACCC CCCAATAAAAC- |
|
|
|