Information for 11-GCATGTGCGA (Motif 29)

A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A G T C C G T A A G T C C G T A A C G T A C T G A G T C
p-value:1e-6
log p-value:-1.525e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.7 +/- 23.0bp
Average Position of motif in Background157.1 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MXI1/MA1108.2/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-GCATGTGCGA
NNCATGTGNN-
A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C A C G T

SOHLH2/MA1560.1/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCATGTGCGA
NGCACGTGCG-
A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
A G C T A C T G A G T C C T G A G T A C T A C G A G C T C T A G T G A C C T A G A C G T

TCF3/MA0522.3/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCATGTGCGA
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCATGTGCGA---
ATCCACAGGTGCGAAAA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GCATGTGCGA
NNGCAGGTGNN-
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T

TCF4/MA0830.2/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCATGTGCGA
NNGGCAGGTGCNN
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCATGTGCGA
GGCAGGTGCA-
A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GCATGTGCGA
NNGGCAGGTGCNN
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GCATGTGCGA
SDGCAGGTGCNS
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCATGTGCGA
NGKCACGTGM--
A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C G T A C T G A G T C A C T G C G T A
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T