| p-value: | 1e-12 |
| log p-value: | -2.935e+01 |
| Information Content per bp: | 1.774 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 0.56% |
| Number of Background Sequences with motif | 0.4 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 127.7 +/- 30.9bp |
| Average Position of motif in Background | 64.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 2.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTCCGCAYGR DCTCAGCAGG- |
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POL013.1_MED-1/Jaspar
| Match Rank: | 2 |
| Score: | 0.65 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -CTCCGCAYGR GCTCCG----- |
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PB0206.1_Zic2_2/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CTCCGCAYGR-- CCACACAGCAGGAGA |
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|
|
Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTCCGCAYGR-- CHCAGCRGGRGG |
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|
|
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | CTCCGCAYGR-- CACAGCAGGGGG |
|
|
|
PB0207.1_Zic3_2/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CTCCGCAYGR-- GAGCACAGCAGGACA |
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|
|
PB0205.1_Zic1_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---CTCCGCAYGR-- CCACACAGCAGGAGA |
|
|
|
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTCCGCAYGR---- DCHCAGCAGGRGGCC |
|
|
|
PB0044.1_Mtf1_1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTCCGCAYGR--- NNTTTGCACACGGCCC |
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|
|
Zic2/MA1629.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTCCGCAYGR-- CTCACAGCAGGGGG |
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