Information for 1-TCTGGCGGTA (Motif 6)

A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C G T A C A T C G G T A C A G T C C G T A A C T G C G T A
p-value:1e-11
log p-value:-2.590e+01
Information Content per bp:1.897
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets80.5 +/- 62.7bp
Average Position of motif in Background114.1 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)3.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCTGGCGGTA
GGTCTGGCAT--
A C G T A C G T A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

E2F8/MA0865.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTGGCGGTA--
TTTGGCGGGAAA
A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A A C G T A C G T
C G A T A C G T A G C T A T C G C T A G A T G C A T C G C T A G C T A G G T C A C T G A C G T A

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGCGGTA---
TTTTGGCGGGAAAA
A C G T A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A A C G T A C G T A C G T
C G A T C G A T G C A T C G A T T A C G A C T G A G T C A C T G A T C G A T C G C T G A C T G A G C T A G C T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTGGCGGTA-
-CWGGCGGGAA
A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A A C G T
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGCGGTA
VBSYGTCTGG-----
A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

ZBTB26/MA1579.1/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TCTGGCGGTA
NNNNTTTCTGGAGNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A
C T G A C A G T A G T C A C G T A C G T A G C T C A G T G A T C G A C T T C A G A C T G C G T A C T A G G C A T G T C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCTGGCGGTA
CTGTCTGG-----
A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGCGGTA
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTGGCGGTA--
BTKGGCGGGAAA
A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A A C G T A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

ZBTB33/MA0527.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TCTGGCGGTA----
CTCTCGCGAGATCTG
A C G T A C G T G T A C A C G T A C T G A C T G A T G C C A T G A C T G A C G T C G T A A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G