Information for 10-GGGTCTTTAA (Motif 16)

C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A C G T A A C T G T C G A T G A C G T A C A G T C
p-value:1e-8
log p-value:-1.853e+01
Information Content per bp:1.817
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif279.9
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets82.6 +/- 46.2bp
Average Position of motif in Background97.2 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGGTCTTTAA--
AGGTCTCTAACC
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

PH0073.1_Hoxc9/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGGTCTTTAA----
GGAGGTCATTAATTAT
A C G T A C G T C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T A C G T A C G T A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:GGGTCTTTAA-
-----TTTAAT
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

TCF7/MA0769.2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GGGTCTTTAA---
--TCCTTTGATGT
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G A C G C A T C G A T C G A T A C T G C G T A C G A T T A C G G C A T

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGTCTTTAA-
--CTCATTAAA
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T
A C G T A C G T T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGGTCTTTAA--
--GTCGTAAAAT
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T A C G T
A C G T A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

Hoxa11/MA0911.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGTCTTTAA---
-GGTCGTAAAATT
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T A C G T A C G T
A C G T C T A G T C A G A G C T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C A T C G A T

NKX6-1/MA0674.1/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGGTCTTTAA
--GTAATTAA
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A
A C G T A C G T T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A

HOXC11/MA0651.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGGTCTTTAA--
-GGTCGTAAAAT
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T A C G T
A C G T C T A G T C A G G A C T G A T C C T A G C G A T C G T A C G T A G T C A G C T A G C A T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GGGTCTTTAA-----
-----TTTAATTGCN
C T A G A C T G A C T G A C G T T G A C G C A T A C G T A C G T T G C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C