Information for 21-GTATAATTAG (Motif 36)

A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A C G T A A C G T A C G T C G T A A C G T C G T A A G T C
p-value:1e-3
log p-value:-7.037e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background143.0 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:1
Score:0.81
Offset:3
Orientation:forward strand
Alignment:GTATAATTAG-
---TAATTAGN
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C

VSX2/MA0726.1/Jaspar

Match Rank:2
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GTATAATTAG
--NTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G

VSX1/MA0725.1/Jaspar

Match Rank:3
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GTATAATTAG
--NTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G

PRRX2/MA0075.3/Jaspar

Match Rank:4
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GTATAATTAG
--NTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T G A C T A G C T C G T A C G T A A C G T A C G T T C G A T C A G

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GTATAATTAG
--TTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

ARGFX/MA1463.1/Jaspar

Match Rank:6
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GTATAATTAG-
-TTTAATTAGN
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G A C G T
A C G T C A G T G A C T G A C T C T G A C G T A A C G T C A G T C T G A C T A G G T C A

LHX9/MA0701.2/Jaspar

Match Rank:7
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GTATAATTAG
--NTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T A G C T A G C T G T C A C G T A A C G T C A G T C T G A T C A G

VAX1/MA0722.1/Jaspar

Match Rank:8
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GTATAATTAG
--NTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T C T A G G A C T G T C A G C T A C A G T C A G T C T G A T C A G

HOXD3/MA0912.2/Jaspar

Match Rank:9
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:GTATAATTAG
--GTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T T A C G A G C T G T C A C G T A A C G T A C G T C T G A T C A G

EMX1/MA0612.2/Jaspar

Match Rank:10
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GTATAATTAG
--CTAATTAG
A C T G A C G T C G T A A C G T C G T A C G T A A C G T A C G T C G T A A C T G
A C G T A C G T A T G C G A C T G T C A C G T A A C G T A C G T C G T A T A C G