Information for 8-CTAGTATTCG (Motif 24)

A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C T G
p-value:1e-3
log p-value:-8.126e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets175.0 +/- 0.0bp
Average Position of motif in Background154.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTAGTATTCG---
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTATTCG-
GCTATTTATAGC
A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C

Arid5a/MA0602.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAGTATTCG----
CTAATATTGCTAAA
A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAGTATTCG----
CTAATATTGCTAAA
A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTAGTATTCG
CACCTACTAT---
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G
A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTAGTATTCG-
TCTATTTATAGN
A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T

SOX12/MA1561.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTAGTATTCG--
-NATTGTTCGGT
A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T
A C G T A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

MEF2A/MA0052.4/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTAGTATTCG--
NNTCTATTTTTAGNN
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T
C G A T C G A T C A G T G A T C G A C T C G T A G C A T G C A T G C A T G C A T G C A T C T G A C T A G G T C A G C T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CTAGTATTCG----
TTCNAAGTACTTNNNNN
A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

SOX14/MA1562.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTAGTATTCG-
-CATTGTTCGG
A G T C A C G T C G T A A C T G A C G T C G T A A C G T A C G T A G T C A C T G A C G T
A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G