Information for 14-AGAGACAAGTCC (Motif 18)

C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A G T C A C G T A C G T A C T G A C G T A G T C A C G T A G T C A C G T
p-value:1e-3
log p-value:-9.049e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets150.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGAGACAAGTCC
-AAGGCAAGTGT
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

GATA2/MA0036.3/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGACAAGTCC
NNAGATAAGNN-
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAGACAAGTCC
-CAGATAAGGN-
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T

GATA4/MA0482.2/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGAGACAAGTCC
NNAGATAAGGNN
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C
C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAGACAAGTCC
-NAGATAAGNN-
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----AGAGACAAGTCC-----
TTTTTAGAGATAAGAAATAAAG
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGAGACAAGTCC-----
-GGCAAAAGTCCAATAA
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

MYOD1/MA0499.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAGACAAGTCC--
-NNGACAGGTGCNN
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T
A C G T T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGAGACAAGTCC
NVAGATAAGR--
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGAGACAAGTCC--
AATGCCACGTCATC
C G T A A C T G C G T A A C T G C G T A A G T C C G T A C G T A A C T G A C G T A G T C A G T C A C G T A C G T
C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C