Information for 1-AGATATCGGC (Motif 3)

C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C T G C G T A A C G T C G T A A C G T A G T C A C G T
p-value:1e-3
log p-value:-9.056e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----AGATATCGGC--
GACAGAGATATCAGTGT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----AGATATCGGC--
NGCTGCGATATCGNCGC
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C A C G T A C G T
G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGATATCGGC
CAAGATGGCGGC
A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGATATCGGC
AGATAASR--
C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C
G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T

OVOL1/MA1544.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGATATCGGC---
NANATAACGGTTTT
A C G T C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C A C G T A C G T A C G T
T A G C C T G A T C G A T C G A A C G T C G T A G T C A G T A C A C T G A C T G C G A T G C A T G A C T G C A T

GATA3/MA0037.3/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGATATCGGC
AGATAAGA--
C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C
G C T A A C T G C G T A A C G T G C T A C T G A T A C G T C G A A C G T A C G T

OVOL2/MA1545.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AGATATCGGC--
NNNNTAACGGTNN
A C G T C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C A C G T A C G T
T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

GATA5/MA0766.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGATATCGGC
CAGATAAGGA-
A C G T C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C
A T G C G C T A A C T G C G T A A C G T C G T A C G T A A T C G T C A G T G C A A C G T

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AGATATCGGC--
ATGGGATATATCCGCCT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

TRPS1(Zf)/MCF7-TRPS1-ChIP-Seq(GSE107013)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGATATCGGC
AGATAAGANN
C G T A A C T G C G T A A C G T C G T A A C G T A G T C A C T G A C T G A G T C
C G T A A C T G C G T A A C G T C G T A C T G A T C A G T G C A A G C T T G A C