Information for 4-TGCGGGCG (Motif 42)

A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C A G T C A C T G A G T C C G T A
p-value:1e-2
log p-value:-5.919e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets112.0 +/- 0.0bp
Average Position of motif in Background97.1 +/- 48.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--TGCGGGCG
TATGCGGGTA
A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:reverse strand
Alignment:-----TGCGGGCG---
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCGGGCG-
TNNGGGCAG
A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TGCGGGCG-
CATGCGGGTAC
A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGCGGGCG--
NGCGTGGGCGGR
A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T
A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----TGCGGGCG-----
NNNAAGGGGGCGGGNNN
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGGCG---
NCGCGGACGTTG
A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

EGR1/MA0162.4/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGCGGGCG---
GNGCGTGGGCGTGN
A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T
T A C G A C T G T C A G A G T C T A C G A C G T T A C G A T C G T A C G G A T C T C A G A C G T T A C G A C T G

KLF11/MA1512.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:TGCGGGCG----
-GTGGGCGTGGC
A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T C T A G C A G T T C A G T A C G T C A G G A T C C T A G A C G T C A T G C A T G A T G C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGCGGGCG-
TTGCGTGCVA
A C G T A C G T A C T G A G T C A C T G A C T G A C T G A G T C A C T G A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A