Information for 5-GCCTAACCCG (Motif 10)

A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G
Reverse Opposite:
A G T C A C T G A C T G A C T G A C G T A C G T C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets137.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GCCTAACCCG
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Dmbx1/MA0883.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAACCCG-----
NNNATTAATCCGNTTNA
A C G T A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTAACCCG-----
NNNATTAATCCGNTTNA
A C G T A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCTAACCCG
-GCTAATCC-
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCTAACCCG-----
NNNNTGACCCGGCGCG
A C G T A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

GSC2/MA0891.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCTAACCCG-
-CCTAATCCGC
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G A C G T
A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCCTAACCCG-----
-NNTAATCCNGNCNN
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCTAACCCG
--TTAATCCG
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G
A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCTAACCCG-
-GCTAATCCCC
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G A C G T
A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PITX1/MA0682.2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCTAACCCG
--CTAATCCC
A C T G A G T C A G T C A C G T C G T A C G T A A G T C A G T C A G T C A C T G
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C