Information for 3-ACTTAAGGAC (Motif 9)

C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C G T A C G T C G T A C G T A A C T G A C G T
p-value:1e-8
log p-value:-1.939e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets156.0 +/- 25.4bp
Average Position of motif in Background122.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAAGGAC
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------ACTTAAGGAC
CATAACCACTTAACAAC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0073.1_Hoxc9/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ACTTAAGGAC----
NNAATTAATGACCNNN
A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ACTTAAGGAC
ACCACTTAA----
A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACTTAAGGAC
GCACTTAA----
A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:6
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------ACTTAAGGAC
ATAACCACTTAAA---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACTTAAGGAC
NTTTTACGAC
C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACTTAAGGAC
RSCACTYRAG---
A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACTTAAGGAC
ACCACTTGAA---
A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACTTAAGGAC------
NATTTAAGTACTTANNA
A C G T C G T A A G T C A C G T A C G T C G T A C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A