Information for 1-AATGCGACAC (Motif 3)

C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C A C T G A G T C C G T A A C G T A C G T
p-value:1e-16
log p-value:-3.833e+01
Information Content per bp:1.952
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.9 +/- 61.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AATGCGACAC------
NNGGCGACACCTCNNN
C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

ZFP57/MA1583.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AATGCGACAC---
NNTGCGGCAANNN
C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C

PB0106.1_Arid5a_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AATGCGACAC--
CATACAATACGAAATAA
A C G T A C G T A C G T A C G T A C G T C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AATGCGACAC
NANTGCSGCA-
A C G T C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C
G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATGCGACAC--
TGWAAYCTGABACCB
A C G T A C G T A C G T C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AATGCGACAC-
-TTGCAACATN
C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

JUN::JUNB/MA1132.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AATGCGACAC-
-ATGAGTCATC
C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T
A C G T C T G A C G A T C A T G G T C A T A C G G A C T T G A C G T C A A G C T G T A C

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AATGCGACAC
--TACGTCAT
C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

IRF2/MA0051.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AATGCGACAC------
GGAAAGCGAAACCAAAAC
A C G T A C G T C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C

TBX3/MA1566.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:AATGCGACAC---
---NTCACACCTN
C G T A G T C A A C G T C T A G A G T C A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C