Information for 2-TAAACCGTGC (Motif 9)

A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G A C T G A C G T A C G T A C G T C G T A
p-value:1e-3
log p-value:-8.207e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background188.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BARHL2/MA0635.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAAACCGTGC
GCTAAACGGT--
A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAAACCGTGC--
NNTAATCCNGNCNN
A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAAACCGTGC
TTAATCCG---
A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAAACCGTGC----
ATGGAAACCGTTATTTT
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G C T A C G A T C A T G C A T G G T C A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C A T G C A T G A C T C G A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TAAACCGTGC----
TTGAAAACCGTTAATTT
A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C G A T C A T G C G T A G C T A C T G A C T G A G T A C A T G C A C T G A C G T G A C T C T G A G C T A G C A T G A C T C G A T

Foxq1/MA0040.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TAAACCGTGC
AATAAACAATN-
A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TAAACCGTGC-
AATCGTTAATCCCTTTA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TAAACCGTGC
CTAATCCC---
A C G T A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C
G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T A C G T A C G T

HES6/MA1493.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAAACCGTGC-
-AACACGTGCC
A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C A C G T
A C G T C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TAAACCGTGC
--RTACGTGC
A C G T C G T A C G T A C G T A A G T C A G T C A C T G A C G T A C T G A G T C
A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C