Information for 13-AATTGGAGTG (Motif 33)

C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A G T C A G T C C G T A C G T A A C G T A C G T
p-value:1e-3
log p-value:-7.007e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.0 +/- 0.0bp
Average Position of motif in Background94.4 +/- 77.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AATTGGAGTG--
--BTBRAGTGSN
C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AATTGGAGTG--
-NNTTGAGTGNN
C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AATTGGAGTG
GGGAATTGTAGT-
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AATTGGAGTG--
--CTYRAGTGSY
C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AATTGGAGTG---
---TTGAGTGSTT
C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AATTGGAGTG----
NNNTTGAGTGGNNN
C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

MSX2/MA0708.1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGAGTG
NTAATTGG----
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T

LHX2/MA0700.2/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AATTGGAGTG
NNTAATTGGNN--
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
C G T A G C A T C G A T C G T A G C T A C G A T C G A T C T A G T A C G G C A T G C A T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AATTGGAGTG-
--NTCAAGTGG
C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGAGTG
NTAATTGG----
A C G T A C G T C G T A C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C T G
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T