Information for 25-TTATGGGAGC (Motif 39)

A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A G T C A G T C A G T C C G T A A C G T C G T A C G T A
p-value:1e-2
log p-value:-6.853e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets177.0 +/- 0.0bp
Average Position of motif in Background85.6 +/- 81.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TTATGGGAGC
----CGGAGC
A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTATGGGAGC-
RGSMTBCTGGGAAAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTATGGGAGC--
GANTATTATGGGATGGA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTATGGGAGC
TTTTATKRGG--
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTATGGGAGC----
----GGGAGGACNG
A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTATGGGAGC-----
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

Stat5b/MA1625.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTATGGGAGC--
NNNTTCTGGGAANNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T A C G T
A T C G C G T A A G C T A G C T G A C T T G A C G A C T C A T G C T A G C T A G C G T A C T G A C G T A G A C T T C A G

HOXA13/MA0650.2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTATGGGAGC
GTTTTATTGGN--
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTATGGGAGC
TTTTATTRGN--
A C G T A C G T A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T A C G T

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTATGGGAGC-
-CCTGGGAAAG
A C G T A C G T C G T A A C G T A C T G A C T G A C T G C G T A A C T G A G T C A C G T
A C G T A G T C T A G C A G C T T C A G A C T G A C T G C G T A G T C A T G C A T A C G