Information for 16-TTTGCACACAAT (Motif 20)

A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C G T A C T G A C G T A C T G A G T C C G T A C G T A C G T A
p-value:1e-3
log p-value:-8.760e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCACACAAT--
ATTTGCATACAATGG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0044.1_Mtf1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTTGCACACAAT--
NNTTTGCACACGGCCC
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TTTGCACACAAT-
TACATGTGCACATAAAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTTGCACACAAT-----
--CTCACACAATGGCGC
A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTGCACACAAT---
CGAAGCACACAAAATA
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TTTGCACACAAT-
CAGATGTGCACATACGT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

MTF1/MA0863.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTGCACACAAT--
TTTGCACACGGCAC
A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGCACACAAT
TNTAATTTGCATACNA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TTTGCACACAAT
GATTTGCATA----
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T
A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A A C G T A C G T A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTGCACACAAT-----
--TGCACACACTGAAAA
A C G T A C G T A C G T A C T G A G T C C G T A A G T C C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A