Information for 21-AAGAGGTGTCTA (Motif 21)

C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G T A A G T C C G T A A G T C A G T C A C G T A G T C A C G T A C G T
p-value:1e-4
log p-value:-9.541e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 0.0bp
Average Position of motif in Background110.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGAGGTGTCTA---
GCGGAGGTGTCGCCTC
A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AAGAGGTGTCTA
---AGGTGTCA-
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AAGAGGTGTCTA
--DAGGTGTBAA
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
A C G T A C G T C T A G C T G A T C A G A T C G A G C T C A T G G A C T A G T C C T G A T G C A

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGAGGTGTCTA
NNACAGGTGTNN-
A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:forward strand
Alignment:AAGAGGTGTCTA---
---AGGTCTCTAACC
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

TBX3/MA1566.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AAGAGGTGTCTA
--GAGGTGTGAA
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
A C G T A C G T C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A

PB0047.1_Myf6_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AAGAGGTGTCTA
GAAGAACAGGTGTCCG
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

TBX6/MA1567.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAGAGGTGTCTA
--GAGGTGTGAA
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
A C G T A C G T C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A

TBX18/MA1565.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAGAGGTGTCTA-
-GGAGGTGTGAAA
C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A A C G T
A C G T C T A G C T A G T C G A T C A G C T A G G A C T T C A G C A G T T A C G C G T A C T G A T C G A

Rbpjl/MA1621.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AAGAGGTGTCTA
NNNACAGGTGTNNN
A C G T A C G T C G T A C G T A A C T G C G T A A C T G A C T G A C G T A C T G A C G T A G T C A C G T C G T A
T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G