Information for 10-CCTGGAAATTCA (Motif 13)

A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G
p-value:1e-3
log p-value:-9.020e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background184.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCTGGAAATTCA-
---GGAAATTCCC
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCTGGAAATTCA-
---GGAAATTCCC
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGAAATTCA
TTTCCTGGAAAGNNN
A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCA
NNTGGAAANN--
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCA
AATGGAAAAT--
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCTGGAAATTCA
--TGGAAAA---
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCA
NATGGAAAAN--
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGAAATTCA
NACAGGAAAT---
A C G T A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

NFATC4/MA1525.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTGGAAATTCA
AATGGAAAAT--
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
T C G A C T G A G A C T A C T G A C T G G T C A C G T A G T C A T G C A G C A T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTGGAAATTCA
AATGGAAAAT--
A G T C A G T C A C G T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A G T C C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T