Information for 2-CTAAAGATCC (Motif 26)

A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T A G T C A C G T A C G T A C G T C G T A A C T G
p-value:1e-3
log p-value:-7.545e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets138.0 +/- 0.0bp
Average Position of motif in Background122.5 +/- 166.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB4/MA1499.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTAAAGATCC
NTAATGAT--
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTAAAGATCC
NTAATGAC--
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTAAAGATCC-
---ATAATCCC
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAAAGATCC
NTATYGATCH
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

NR4A1/MA1112.2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTAAAGATCC--
TTAAAGGTCAAA
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C A C G T A C G T
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A

HOXD4/MA1507.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTAAAGATCC
NTAATGAN--
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T A C G T A C G T

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTAAAGATCC-
ACTACAATTCCC
A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C A C G T
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

HOXC4/MA1504.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTAAAGATCC
NTAATGAN--
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C A C G T A C G T

FOXA1/MA0148.4/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTAAAGATCC
ATGTAAACATGT
A C G T A C G T A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

FOXD1/MA0031.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTAAAGATCC
GTAAACAT--
A G T C A C G T C G T A C G T A C G T A A C T G C G T A A C G T A G T C A G T C
A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T