Information for 3-ATCGCCAACC (Motif 4)

C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T A C T G A C T G A G T C A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATCGCCAACC
CGTGCCAAG-
C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

MZF1/MA0056.2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATCGCCAACC
CAAATCCCCACTT
A C G T A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C
G T A C G C T A T G C A T G C A C G A T T A G C G T A C G A T C G A T C G C T A G A T C G C A T A G C T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCGCCAACC----
ACTATGCCAACCTACC
A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCGCCAACC
-ATGCCAACC
C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATCGCCAACC
GGTGCCAAGT
C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

KLF4/MA0039.4/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATCGCCAACC--
CGCCCCACCCCC
C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T
T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATCGCCAACC
-TTGCCAAG-
C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----ATCGCCAACC--
CCTTCGGCGCCAAAAGG
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

ZNF449/MA1656.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATCGCCAACC--
CCAAGCCCAACCAG
A C G T A C G T C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

NFYA/MA0060.3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ATCGCCAACC---
--AACCAATCAGA
C G T A A C G T A G T C A C T G A G T C A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A