| p-value: | 1e-2 |
| log p-value: | -6.649e+00 |
| Information Content per bp: | 1.972 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 0.24% |
| Number of Background Sequences with motif | 4.0 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 105.7 +/- 53.3bp |
| Average Position of motif in Background | 138.1 +/- 25.7bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 3.50 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTGACCCAGTGT----- -TGACCCAGTGACCTAC |
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|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTGACCCAGTGT BTGACCTAVTTW |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTGACCCAGTGT NNHYTGACCTAGWTT |
|
|
|
PB0153.1_Nr2f2_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTGACCCAGTGT- NNNNTGACCCGGCGCG |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTGACCCAGTGT-- TTGACCTANTTATN |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTGACCCAGTGT -TGACCTARTT- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTGACCCAGTGT -TGACCTARTT- |
|
|
|
MAFK/MA0496.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTGACCCAGTGT- TGCTGACTCAGCAAT |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTGACCCAGTGT -TGACCT----- |
|
|
|
NR1D1/MA1531.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTGACCCAGTGT--- NTGACCTACTGACCC |
|
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