Information for 20-TGCATTGTCTTC (Motif 36)

A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G C G T A A G T C C G T A C G T A A C G T A C T G A G T C C G T A
p-value:1e-3
log p-value:-7.596e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets18.0 +/- 0.0bp
Average Position of motif in Background133.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TGCATTGTCTTC
-CCATTGTTTT-
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TGCATTGTCTTC
CTCATTGTC---
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

SOX18/MA1563.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TGCATTGTCTTC
-GCATTGTN---
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
A C G T A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGCATTGTCTTC
NNCCATTGTNN--
A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGCATTGTCTTC-
-CCATTGTTYYBB
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C A C G T
A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGCATTGTCTTC
NNCCATTGTNN--
A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCATTGTCTTC
-CCATTGTTYB-
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGCATTGTCTTC-
NNNCCATTGTGTNAN
A C G T A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGCATTGTCTTC
-CCWTTGTYYB-
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCATTGTCTTC
NCCATTGTTY--
A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C G T A C G T A G T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T