Information for 19-GGGATATGCG (Motif 27)

A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A A C G T C G T A A C G T A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.614e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 0.0bp
Average Position of motif in Background87.7 +/- 81.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGATATGCG
AAGGATATNTN
A C G T A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGGATATGCG-
-GHATATKCAT
A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G A C G T
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

MZF1/MA0056.2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGGATATGCG
NNNTGGGGATTNN--
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T C G A C G T A C T A G C G A T C T A G C T A G C A T G A C T G G C T A A C G T A C G T C G A T C A T G A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGATATGCG---
AGGGGGATTAGCTGCC
A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGATATGCG
-CCATATGT-
A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T

NEUROG1/MA0623.2/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGATATGCG
GACATATGTC
A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGATATGCG
GACATATGTT
A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGATATGCG
NAGATAAGNN
A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A

GCM2/MA0767.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGGATATGCG----
----TATGCGGGTA
A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGATATGCG
CAGATAAGGN
A C T G A C T G A C T G C G T A A C G T C G T A A C G T A C T G A G T C A C T G
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A