Information for 4-CTCGCATT (Motif 32)

A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C T G A G T C A C T G C G T A A C T G
p-value:1e-2
log p-value:-5.129e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif56.3
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets70.0 +/- 0.0bp
Average Position of motif in Background109.8 +/- 85.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0024.1_Gcm1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CTCGCATT---
TCGTACCCGCATCATT
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CTCGCATT-----
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCGCATT
TACCCGCATN
A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTCGCATT
GTACCCGCATN
A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTCGCATT
CACGCA--
A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CTCGCATT-------
TGTTCCCATTGTGTACT
A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTCGCATT---
-CYRCATTCCA
A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCGCATT
TBGCACGCAA-
A C G T A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCGCATT--
NNCTCATTAT
A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCGCATT
VGCTGGCA--
A C G T A C G T A G T C A C G T A G T C A C T G A G T C C G T A A C G T A C G T
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T