Information for 19-TGTCCTATTCAC (Motif 21)

A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A C G T A A C G T C G T A A C T G A C T G C G T A A G T C C G T A
p-value:1e-4
log p-value:-9.644e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets169.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGTCCTATTCAC---
TGACCTTTTGACCTC
A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
A G C T C T A G C G T A G T A C A G T C A C G T G A C T G C A T C A G T T C A G G T C A A G T C A G T C G A C T A G T C

NR1D1/MA1531.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTATTCAC--
NTGACCTACTGACCC
A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

Rarg/MA0859.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTATTCAC---
TTGACCTTTTGACCTT
A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

NR1D2/MA1532.1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTATTCAC--
NTGACCCACTAACCC
A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T
G T C A G A C T T C A G G T C A G A T C G T A C G A T C T G C A T A G C G C A T C T G A T G C A G T A C G T A C A G T C

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCCTATTCAC----
TGACCTTTTGACCTTT
A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

RARA/MA0729.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGTCCTATTCAC---
CATTGACCTTTTGACCTC
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCTATTCAC
BTGACCTAVTTW-
A C G T A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T

RORC/MA1151.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGTCCTATTCAC
TGACCTANTTAN
A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGTCCTATTCAC----
TGACCCAGTGACCTAC
A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGTCCTATTCAC
TGACCTYA----
A C G T A C T G A C G T A G T C A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G T C
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T