Information for 16-CATTAAACTGAG (Motif 18)

A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T C G T A C G T A A C G T A C T G
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets101.5 +/- 43.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid3a/MA0151.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CATTAAACTGAG
-ATTAAA-----
A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATTAAACTGAG
CTCATTAAA-----
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CATTAAACTGAG
YCATTAMC-----
A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T A C G T A C G T A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CATTAAACTGAG
NGCAATTAAA-----
A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CATTAAACTGAG
CTAATTAA------
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CATTAAACTGAG
ACGGCCATAAAATTAAT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CATTAAACTGAG
GGAGGTCATTAATTAT--
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T A C G T A C G T

SIX1/MA1118.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CATTAAACTGAG-
--GTAACCTGATA
A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T C A T G C G A T G C T A C G T A G A T C G T A C G C A T C T A G C G T A A C G T G T C A

HOXC4/MA1504.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATTAAACTGAG
GTCATTAA------
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CATTAAACTGAG
GTAATTAA------
A C G T A C G T A G T C C G T A A C G T A C G T C G T A C G T A C G T A A G T C A C G T A C T G C G T A A C T G
T A C G A G C T G T C A G T C A A C G T G C A T T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T