Information for 13-GTAAGTGTTAGC (Motif 13)

A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C G T A A G T C C G T A A G T C A C G T A C G T C G T A A G T C
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0172.1_Sox1_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GTAAGTGTTAGC-
CTATAATTGTTAGCG
A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGTTAGC
TTAAGTGGT---
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGTGTTAGC
NTTAAGTGGTTNN
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

ZNF652/MA1657.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTAAGTGTTAGC
GAAAGAGTTAAA
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
A C T G T C G A T G C A C T G A A T C G C T G A C T A G C G A T A G C T G C T A T G C A G C T A

TBX4/MA0806.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTAAGTGTTAGC
--AGGTGTGA--
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGTTAGC
TTAAGTGCTT--
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTAAGTGTTAGC
--AGGTGTGA--
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTAAGTGTTAGC
TTAAGTGC----
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTAAGTGTTAGC
--AGGTGTCA--
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTAAGTGTTAGC
--AGGTGTGAAM
A C T G A C G T C G T A C G T A A C T G A C G T A C T G A C G T A C G T C G T A A C T G A G T C
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A