Information for 6-TYTTKTGGSTGR (Motif 7)

A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C C G T A A T C G A G T C A G T C C G T A T G A C C G T A C G T A C T A G C G T A
p-value:1e-4
log p-value:-9.892e+00
Information Content per bp:1.861
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif22.22%
Number of Background Sequences with motif115.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets117.7 +/- 78.6bp
Average Position of motif in Background100.4 +/- 86.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TYTTKTGGSTGR
GTCTGTGGTTT-
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TYTTKTGGSTGR
-NNTGTGGTTT-
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TYTTKTGGSTGR
NNHTGTGGTTWN
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TYTTKTGGSTGR---
---YSTGGGTGGTCT
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TYTTKTGGSTGR---
---CGTGGGTGGTCC
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PH0064.1_Hoxb9/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TYTTKTGGSTGR
NGANTTTTATGGCTCN
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

HOXA13/MA0650.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TYTTKTGGSTGR
GTTTTATTGGN--
A C G T A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
C A T G C A G T A C G T A G C T A G C T C G T A A C G T A C G T C T A G A T C G A C T G A C G T A C G T

CDX1/MA0878.2/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TYTTKTGGSTGR
GTTTTATGGCC--
A C G T A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TYTTKTGGSTGR
----TWGTCTGV
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0167.1_Sox13_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TYTTKTGGSTGR------
-GTATTGGGTGGGTAATT
A C G T G A C T A C G T A C G T A C G T A C G T A C T G A C T G A T G C A C G T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T