Information for 1-CCAATGTRMAAS (Motif 1)

A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
Reverse Opposite:
A T C G A C G T A C G T A C G T A G C T C G T A A G T C C G T A A C G T A C G T A C T G A C T G
p-value:1e-9
log p-value:-2.132e+01
Information Content per bp:1.903
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets117.7 +/- 19.8bp
Average Position of motif in Background92.1 +/- 79.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CCAATGTRMAAS
NTGGCCAATGAG----
A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCAATGTRMAAS
NNCCATTGTNN---
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCAATGTRMAAS
AGCCAATCGG----
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCAATGTRMAAS
NNCCATTGTNN---
A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCAATGTRMAAS
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAATGTRMAAS
TCCAAAGTCCAAA
A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAATGTRMAAS
TCCAAAGTCCAGA
A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAATGTRMAAS
--ATTGCGCAAC
A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
A C G T A C G T T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C

PB0168.1_Sox14_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCAATGTRMAAS
NNNCCATTGTGTNAN
A C G T A C G T A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

CEBPD/MA0836.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAATGTRMAAS-
NNATTGTGCAATN
A G T C A G T C C G T A C G T A A C G T A C T G A C G T C T A G G T A C C G T A C G T A A T C G A C G T
C G T A C G A T T C G A G A C T C A G T C T A G G A C T C T A G G T A C G T C A C T G A A G C T G T C A