Information for 6-ARKCMWTTATCA (Motif 6)

C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A
Reverse Opposite:
A C G T A C T G C T G A A C G T G T C A G T C A C G A T C A T G T A C G G T A C G A C T A C G T
p-value:1e-5
log p-value:-1.236e+01
Information Content per bp:1.675
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif3734.3
Percentage of Background Sequences with motif6.96%
Average Position of motif in Targets111.4 +/- 63.2bp
Average Position of motif in Background100.8 +/- 68.3bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ARKCMWTTATCA
AAACMATTAN--
C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ARKCMWTTATCA-----
NTNTTCTTATCAGTNTN
C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ARKCMWTTATCA
TAATCAATTA---
A C G T C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A
C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T A C G T A C G T

PH0018.1_Dbx1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ARKCMWTTATCA----
TAATTAATTAATAATTA
A C G T C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A A C G T A C G T A C G T A C G T
G A C T G C T A C T G A G C A T G C A T G C T A C G T A G C A T G C A T C G T A G C T A G C A T C G T A T C G A C G A T C G A T C T G A

PB0079.1_Sry_1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ARKCMWTTATCA-----
-TATAATTATAATATTC
C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ARKCMWTTATCA
NTAATBNAATTA---
A C G T A C G T A C G T C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T A C G T

BARX2/MA1471.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ARKCMWTTATCA
AAAAACCATTAC--
A C G T A C G T C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A
C T G A C G T A G C T A C G T A T G C A G A T C T G A C T C G A C A G T G A C T C G T A T A G C A C G T A C G T

HOXA7/MA1498.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ARKCMWTTATCA
--GCAATTAC--
C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A
A C G T A C G T A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ARKCMWTTATCA-----
-GCTAATTATAATTATC
C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

GATA5/MA0766.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ARKCMWTTATCA-
---NCCTTATCTG
C G T A C T G A C A T G A T G C G T A C G C T A A C G T C A G T G T C A A G C T G T A C C G T A A C G T
A C G T A C G T A C G T A C G T A G T C T A G C G C A T C G A T C G T A A C G T A G T C C G A T T A C G