Information for 6-TCCGCAGGGT (Motif 25)

A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C T G A C T G C G T A
p-value:1e-3
log p-value:-8.567e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background122.8 +/- 129.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.4/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCCGCAGGGT---
AGTCCCCAGGGGACT
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCCGCAGGGT
CACAGCAGGGG
A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCCGCAGGGT-
CACAGCAGGGGG
A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCCGCAGGGT
DCTCAGCAGG--
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCGCAGGGT--
TCCCCTGGGGAC
A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

Zic2/MA1629.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TCCGCAGGGT-
CTCACAGCAGGGGG
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

TFAP2A/MA0003.4/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TCCGCAGGGT-
ATTGCCTCAGGCCA
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCGCAGGGT---
DCHCAGCAGGRGGCC
A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCGCAGGGT-
NNCGCCTCAGGCNN
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCGCAGGGT-
CHCAGCRGGRGG
A C G T A C G T A G T C A G T C A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T
T G A C G T C A A G T C G C T A C T A G A G T C C T G A C A T G A C T G C T A G T A C G T C A G