Information for 15-AACCCTWAAA (Motif 24)

T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A
Reverse Opposite:
G C A T A G C T C A G T C G T A C T G A C A T G C A T G A C T G C G A T A C G T
p-value:1e-6
log p-value:-1.477e+01
Information Content per bp:1.479
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif1492.5
Percentage of Background Sequences with motif3.09%
Average Position of motif in Targets96.6 +/- 54.6bp
Average Position of motif in Background101.9 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3-2/MA0122.3/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AACCCTWAAA
ATAACCACTTAAA
A C G T A C G T A C G T T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACCCTWAAA
ACCACTTAA-
T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A
T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AACCCTWAAA-
ACCACTCAAAA
T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AACCCTWAAA--
AAGCCCCCCAAAAAT
A C G T A C G T A C G T T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A A C G T A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACCCTWAAA
-BCMATTAG-
T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AACCCTWAAA
AAACMATTAN-
A C G T T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A
T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AACCCTWAAA
NGCAATTAAA
T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A
T A C G A T C G G A T C G T C A C T G A G C A T C G A T G C T A T C G A G C T A

PH0064.1_Hoxb9/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AACCCTWAAA----
AGAGCCATAAAATTCG
A C G T A C G T T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A A C G T A C G T A C G T A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACCCTWAAA
VGCCATAAAA
T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A
T C A G T A C G G A T C G T A C T C G A C G A T C T G A C G T A G C T A C G T A

HOXA13/MA0650.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AACCCTWAAA-
CCCAATAAAAC
T G C A G C T A T G A C G T A C G T A C G A C T C G A T G T C A T C G A C G T A A C G T
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C