Information for 20-AAGGTAAAGGAT (Motif 23)

C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A G T C A C G T A C G T A C G T C G T A A G T C A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.760e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background22.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGGTAAAGGAT-
-AGGTCAAGGTCA
C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

NR6A1/MA1541.1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAGGTAAAGGAT--
GTCAAGTTCAAGGTCAA
A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

NR2F2/MA1111.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAGGTAAAGGAT
CAAAGGTCAAA---
A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
G A T C G T C A C G T A C T G A C A T G C T A G A C G T G A T C C T G A C T G A C T G A A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGTAAAGGAT-
-AGGTCAAGGTCA
C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Esrrg/MA0643.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGTAAAGGAT
TCAAGGTCAT----
A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AAGGTAAAGGAT
CAAACGTAAACAAT
A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGGTAAAGGAT
CAGGTAAGTAT-
C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGGTAAAGGAT
TCAAGGTCAN----
A C G T A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGGTAAAGGAT
--GCTAAACGGT
C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
A C G T A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGGTAAAGGAT
CAAGGHCANV---
A C G T C G T A C G T A A C T G A C T G A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T