Information for 11-GACGTGAGGG (Motif 24)

A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A C G T A G T C C G T A A G T C A C T G A C G T A G T C
p-value:1e-3
log p-value:-8.376e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.0 +/- 0.0bp
Average Position of motif in Background115.7 +/- 20.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZKSCAN5/MA1652.1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GACGTGAGGG
GGAGGAGGTGAGAA
A C G T A C G T A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
C T A G T C A G C T G A C T A G T C A G T G C A C T A G C T A G A G C T T C A G T C G A C A T G T C G A T C G A

CRE(bZIP)/Promoter/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GACGTGAGGG
GTGACGTCACCG
A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GACGTGAGGG
TACGTGCV--
A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GACGTGAGGG
GGGTACGTGC---
A C G T A C G T A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACGTGAGGG
GGACGTGC---
A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GACGTGAGGG
RTACGTGC---
A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GACGTGAGGG
TGACGT-----
A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T A C G T A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GACGTGAGGG
GTACGTGCCC-
A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGAGGG
NCACGTGACN-
A C G T A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GACGTGAGGG
CACGTG----
A C T G C G T A A G T C A C T G A C G T A C T G C G T A A C T G A C T G A C T G
G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T