| p-value: | 1e-11 |
| log p-value: | -2.762e+01 |
| Information Content per bp: | 1.578 |
| Number of Target Sequences with motif | 15.0 |
| Percentage of Target Sequences with motif | 1.46% |
| Number of Background Sequences with motif | 51.7 |
| Percentage of Background Sequences with motif | 0.11% |
| Average Position of motif in Targets | 105.9 +/- 57.5bp |
| Average Position of motif in Background | 104.2 +/- 50.4bp |
| Strand Bias (log2 ratio + to - strand density) | 0.6 |
| Multiplicity (# of sites on avg that occur together) | 2.20 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA---- AGAGCCATAAAATTCG |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA-- --NGYCATAAAWCH |
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|
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA --VGCCATAAAA |
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|
|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AAAACCCTAAAA ATAACCACTTAAA |
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|
|
HOXB13/MA0901.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA--- -AACCAATAAAATTT |
|
|
|
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AAAACCCTAAAA --KGCCATAAAA |
|
|
|
PH0057.1_Hoxb13/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA---- AACCCAATAAAATTCG |
|
|
|
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA- ---CYHATAAAAN |
|
|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA----- AATGCAATAAAATTTAT |
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|
|
PH0078.1_Hoxd13/Jaspar
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA---- CTACCAATAAAATTCT |
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