| p-value: | 1e-3 |
| log p-value: | -7.836e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.67% |
| Number of Background Sequences with motif | 2.1 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 92.0 +/- 0.0bp |
| Average Position of motif in Background | 82.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Smad4/MA1153.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.58 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATAGTCTTGAAG --TGTCTAGA-- |
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PH0066.1_Hoxc11/Jaspar
| Match Rank: | 2 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATAGTCTTGAAG--- TAAAGTCGTAAAATAG |
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PH0065.1_Hoxc10/Jaspar
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATAGTCTTGAAG--- TAAAGTCGTAAAACGT |
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PH0047.1_Hoxa11/Jaspar
| Match Rank: | 4 |
| Score: | 0.56 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATAGTCTTGAAG--- TAAAGTCGTAAAACAT |
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HSF2/MA0770.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.56 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATAGTCTTGAAG GAANGTTCTAGAA- |
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|
|
HSF1/MA0486.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.56 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATAGTCTTGAAG GAACGTTCTAGAA- |
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POL008.1_DCE_S_I/Jaspar
| Match Rank: | 7 |
| Score: | 0.55 |
| Offset: | 7 |
| Orientation: | reverse strand |
| Alignment: | ATAGTCTTGAAG- -------NGAAGC |
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SD0003.1_at_AC_acceptor/Jaspar
| Match Rank: | 8 |
| Score: | 0.54 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATAGTCTTGAAG AAGATATCCTT---- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 9 |
| Score: | 0.54 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ATAGTCTTGAAG -TWGTCTGV--- |
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SMAD3/MA0795.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ATAGTCTTGAAG --TGTCTAGACG |
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