Information for 11-ATATAGTGCC (Motif 34)

C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A A G T C A C G T C G T A A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.291e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background87.0 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ATATAGTGCC----
-----ATGCCCACC
C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATATAGTGCC
BTBRAGTGSN
C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATATAGTGCC-
-TTGAGTGSTT
C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATATAGTGCC
NGCCATATGGTG--
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATATAGTGCC
ANCATATGGT---
A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C
C T G A T G C A G T A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATATAGTGCC-
-TTRAGTGSYK
C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

OLIG2/MA0678.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATATAGTGCC
ACCATATGGT---
A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C
C T G A T G A C G T A C C T G A A C G T C G T A G A C T A C T G A C T G G A C T A C G T A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATATAGTGCC-
NTTTTATTGCNN
A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T
C G A T G C A T C G A T G C A T G C A T T C G A G A C T C A G T C T A G G A T C G C A T G A C T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:ATATAGTGCC----
-----ATGCCAACC
C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ATATAGTGCC
CCAAAAATAG----
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C G T C G T A A C T G A C G T A C T G A G T C A G T C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T