Information for 9-ACTCACTAAT (Motif 19)

T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T
Reverse Opposite:
G T C A A C G T A C G T T G C A T A C G A C G T A T C G G C T A C A T G A C G T
p-value:1e-4
log p-value:-1.062e+01
Information Content per bp:1.540
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif49.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets91.5 +/- 60.6bp
Average Position of motif in Background90.7 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACTCACTAAT
GTACACTCAC----
A C G T A C G T A C G T A C G T T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T A C G T

PH0034.1_Gbx2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ACTCACTAAT-------
AANCGCTAATTAGCNNN
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T G C A G A C T A T G C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C A C T G A T G C G C A T

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ACTCACTAAT----
GACNTCATTAATAANN
A C G T A C G T T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

HOXD3/MA0912.2/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACTCACTAAT---
-----CTAATTAC
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G C T G T C A C G T A A C G T A C G T C T G A A T G C

PH0058.1_Hoxb3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTCACTAAT-------
TNNNACTAATTAGNTCA
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A

PH0109.1_Nkx1-1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACTCACTAAT-------
NCCCACTAATTAGCGCA
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A

Isl1/MA1608.1/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:ACTCACTAAT----
---NNCTAATGGNN
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

BARX1/MA0875.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACTCACTAAT---
-----NTAATTGN
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

PDX1/MA0132.2/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACTCACTAAT---
-----CTAATTAN
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

HOXB2/MA0902.2/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACTCACTAAT---
-----CTAATTAC
T G C A G T A C C G A T T A G C T G C A A T G C A C G T T G C A T G C A C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T G T C A C G T A A C G T A C G T C T G A T A G C