Information for 4-GCCTCGACTTTG (Motif 4)

T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C T G A A C T G A C G T A G T C A C T G C G T A A C T G A C T G A G T C
p-value:1e-14
log p-value:-3.444e+01
Information Content per bp:1.924
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets129.1 +/- 44.7bp
Average Position of motif in Background141.8 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4G/MA0484.2/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCCTCGACTTTG--
-NNTGGACTTTGNN
T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T
A C G T G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

HNF4A/MA0114.4/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GCCTCGACTTTG--
-NNTGGACTTTGNN
T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T
A C G T G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GCCTCGACTTTG-------
---TGGACTTTGNNCTNTG
T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NR6A1/MA1541.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCGACTTTG--
NTGACCTTGAACTTGAN
A C G T A C G T A C G T T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T
G C A T G A C T T C A G T G C A G T A C G T A C C A G T G C A T T C A G T C G A G T C A G T A C A C G T G A C T T A C G T C G A T G A C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCGACTTTG---
NNATTGGACTTTNGNN
A C G T T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCTCGACTTTG
---TTGACTTTT
T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

PB0014.1_Esrra_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCTCGACTTTG----
NNNNATGACCTTGANTN
A C G T T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

NR5A1/MA1540.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCTCGACTTTG--
---NTGACCTTGAN
T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C T A G G A C T T C A G C T G A A G T C G T A C G C A T G A C T T A C G C T G A T G A C

ZNF135/MA1587.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCTCGACTTTG---
-CCTCGACCTCCTGA
T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A G T C A G T C A G C T A G T C T C A G C T G A T A G C A G T C A G C T A T G C G A T C G A C T T C A G C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GCCTCGACTTTG
NNGGCCACGCCTTTN
A C G T A C G T A C G T T C A G A G T C A G T C A C G T G T A C A C T G C G T A A G T C A G C T A C G T A C G T A C T G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G