Information for 2-AYGCMCYASSMA (Motif 2)

C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A
Reverse Opposite:
C G A T A C G T A T C G A T C G A C G T C T A G A C T G A C T G A C T G A G T C C T G A A C G T
p-value:1e-7
log p-value:-1.667e+01
Information Content per bp:1.802
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif44.44%
Number of Background Sequences with motif417.0
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets149.5 +/- 15.9bp
Average Position of motif in Background98.4 +/- 79.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS3/MA0737.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AYGCMCYASSMA-
GACCCCCCACGAAG
A C G T C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A A C G T
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AYGCMCYASSMA
AAGCATACGCCCAACTT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T A C G T

KLF4/MA0039.4/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AYGCMCYASSMA-
-CGCCCCACCCCC
C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A A C G T
A C G T T A G C A T C G G A T C G A T C G T A C G T A C C T G A A T G C T A G C G A T C G T A C A T G C

KLF6/MA1517.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AYGCMCYASSMA
GGCCACGCCCA-----
A C G T A C G T A C G T A C G T C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A
A T C G T C A G T G A C T G A C G T C A A G T C C T A G A G T C T A G C G T A C G T C A A C G T A C G T A C G T A C G T A C G T

ZNF449/MA1656.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AYGCMCYASSMA
CCAAGCCCAACCAG
A C G T A C G T C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AYGCMCYASSMA
--GCCACACCCA
C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AYGCMCYASSMA
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AYGCMCYASSMA--
AGACCCCCCACGAAGC
A C G T A C G T C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A A C G T A C G T
G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AYGCMCYASSMA
-AGCCTCAGGCA
C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AYGCMCYASSMA--
--GGACCACCCACG
C G T A A G C T C T A G A G T C G T A C G T A C A G T C C G T A A T G C A T G C G T C A C G T A A C G T A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G