Information for 3-TTATAGTATTAC (Motif 4)

A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A C G T A A C G T C G T A A G T C A C G T C G T A A C G T C G T A C G T A
p-value:1e-4
log p-value:-1.073e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0174.1_Sox30_2/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TTATAGTATTAC
NCGTATTATAATCNTA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTATAGTATTAC
TATAATTATAATATTC-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTATAGTATTAC
GTAATCDGATTA-
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTATAGTATTAC
NTAATBNAATTA-
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTATAGTATTAC-
TCTTTANTAATANN
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C A C G T
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TTATAGTATTAC
YTAATYNRATTA-
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
G A T C G C A T C T G A C G T A A G C T A G C T C G T A T C G A C T G A A C G T G C A T C G T A A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTATAGTATTAC
TAATTAAATTA-
A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTATAGTATTAC
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TTATAGTATTAC
NNTNNCAATATTAG
A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0198.1_Zfp128_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTATAGTATTAC-
NNTATANATATACN
A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T C G T A A C G T A C G T C G T A A G T C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A