| p-value: | 1e-3 |
| log p-value: | -8.488e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.9 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 170.0 +/- 0.0bp |
| Average Position of motif in Background | 129.2 +/- 0.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Rhox11/MA0629.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AATACATCGC--- TCNNTTTACAGCGNNNT |
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PH0157.1_Rhox11_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AATACATCGC--- TCNNTTTACAGCGNNNT |
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DMRT3/MA0610.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AATACATCGC NTTGATACATT-- |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 4 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --AATACATCGC GYCATCMATCAT |
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PH0158.1_Rhox11_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.57 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----AATACATCGC--- TCNCTTTACAGCGNNNT |
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|
|
PH0044.1_Homez/Jaspar
| Match Rank: | 6 |
| Score: | 0.56 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AATACATCGC------- AAAACATCGTTTTTAAG |
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|
|
PB0098.1_Zfp410_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATACATCGC------ NNNTCCATCCCATAANN |
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|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -AATACATCGC YCATCMATCA- |
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|
|
MEIS2(var.2)/MA1640.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AATACATCGC-- NNCCATAAATCATNN |
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|
|
PB0163.1_Six6_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----AATACATCGC-- ANNNGGATATATCCNNN |
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