Information for 13-GATTGTAAGC (Motif 35)

A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G T A A G T C C G T A C G T A A C G T A G T C
p-value:1e-3
log p-value:-7.115e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets72.0 +/- 0.0bp
Average Position of motif in Background94.6 +/- 102.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GATTGTAAGC----
CCATTGTATGCAAAT
A C G T A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SRY/MA0084.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATTGTAAGC
-ATTGTTTAN
A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox5/MA0087.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GATTGTAAGC
-ATTGTTA--
A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATTGTAAGC
TTGATTGN----
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GATTGTAAGC-
CTATAATTGTTAGCG
A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A C G T
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GATTGTAAGC
-ATTGTT---
A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GATTGTAAGC---
NCGTATTATAATCNTA
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

SOX2/MA0143.4/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GATTGTAAGC
NNCCATTGTNN--
A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATTGTAAGC
NTGATTGACAGN
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATTGTAAGC---
NAGATWNBNATCTNN
A C G T A C G T A C T G C G T A A C G T A C G T A C T G A C G T C G T A C G T A A C T G A G T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C