Information for 2-GGTAGGTG (Motif 24)

A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G T C A C G T C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.257e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif949.8
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets76.0 +/- 84.9bp
Average Position of motif in Background96.3 +/- 123.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGGTG---
NNGGCAGGTGCNN
A C G T A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G G A C T T A C G A T G C G C A T T A C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGTAGGTG--
NNGCAGGTGNN
A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

TCF3/MA0522.3/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGTAGGTG--
NNGCAGGTGNN
A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GGTAGGTG---
SDGCAGGTGCNS
A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF4/MA0830.2/Jaspar

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GGTAGGTG---
NNGGCAGGTGCNN
A C G T A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T A C G T
T A C G T A C G C T A G T A C G A T G C T C G A A T C G T A C G A G C T A T C G A T G C G T A C T A C G

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGTAGGTG--
RGCAGGTGYA
A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T
T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GGTAGGTG--
GGCAGGTGCA
A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

ZKSCAN1/MA1585.1/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGTAGGTG
ATAGTAGGTG
A C G T A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GGTAGGTG--
NNGCAGGTGNN
A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T A C G T
T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GGTAGGTG-
CAGGTAAGTAT
A C G T A C G T A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G A C G T
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T