Information for 3-TTTACAGCCGTA (Motif 4)

C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C C T A G A C T G A G T C G A C T A C T G A C G T C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.400e+01
Information Content per bp:1.941
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets79.0 +/- 52.0bp
Average Position of motif in Background112.1 +/- 111.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGCCGTA-
TCNCTTTACAGCGNNNT
A C G T A C G T A C G T A C G T C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGCCGTA-
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T A C G T C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGCCGTA-
TCNNTTTACAGCGNNNT
A C G T A C G T A C G T A C G T C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

MYF5/MA1641.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTACAGCCGTA-
-NNACAGCTGTNN
C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T
A C G T T A C G T C G A T C G A T A G C C G T A A T C G T A G C G C A T A T C G A G C T A G C T A T G C

Ptf1a(var.2)/MA1619.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTACAGCCGTA-
-GCACAGCTGTGC
C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A A C G T
A C G T T C A G T G A C T C G A T G A C T C G A A T C G T A G C A G C T A C T G A G C T A C T G A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTTACAGCCGTA
-BAACAGCTGT-
C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
A C G T A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGCCGTA
DGWTTTATGRCN---
A C G T A C G T A C G T C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C A C G T A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTACAGCCGTA
TTTTATGGCM---
A C G T C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C A C G T A C G T A C G T

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTACAGCCGTA
TTTTATGGCB---
A C G T C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTACAGCCGTA
TTGACAGC----
C G A T C G A T A C G T C G T A A G T C C G T A A C T G A G T C A G T C A C T G A C G T C G T A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T