Information for 5-GATAGATTTGAT (Motif 6)

A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T G T A C C T G A C G T A C G T A A C G T A G T C A C G T C G T A A G C T A G T C
p-value:1e-5
log p-value:-1.320e+01
Information Content per bp:1.948
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif19.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets84.5 +/- 53.5bp
Average Position of motif in Background75.1 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA1/MA0035.4/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GATAGATTTGAT
-NNAGATTAGAN
A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T
A C G T C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:GATAGATTTGAT
------TTTAAT
A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GATAGATTTGAT-------
TTTTGTAGATTTTATCGACTTA
A C G T A C G T A C G T A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A

PB0105.1_Arid3a_2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GATAGATTTGAT------
---NNATNTGATANNNNN
A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A G C T A A G C T G C A T G A C T A T C G T C G A A G C T T C G A A G T C A T C G A C T G C A T G C A G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GATAGATTTGAT
-ATTGATTYND-
A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T
A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T A C G T

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GATAGATTTGAT-----
NNNNNBAGATAWYATCTVHN
A C G T A C G T A C G T A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

ONECUT2/MA0756.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATAGATTTGAT
ATTATCGATTTTTT
A C G T A C G T A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT1/MA0679.2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GATAGATTTGAT
NNTTTATTGATTTTTT
A C G T A C G T A C G T A C G T A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T
C G A T C G T A C G A T C G A T G A C T C T G A G C A T G A C T C A T G C G T A G A C T G A C T C G A T G C A T G C A T G C A T

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GATAGATTTGAT--
--TTGATTRGRTTA
A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C G A T A C T G C G T A A C G T A C G T C T A G C T A G C T A G A G C T A G C T C G T A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GATAGATTTGAT
ATGATKGATGRC--
A C G T A C G T A C T G C T G A A C G T C G T A A C T G C G T A C G A T A C G T A G C T A C T G C G T A A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C A C G T A C G T