Information for 12-GGGGTCTCCC (Motif 28)

A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A C T G C G T A A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.447e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background57.7 +/- 12.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:GGGGTCTCCC--
GGGGATTCCCCC
A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GGGGTCTCCC
NRRGGGTCTT--
A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTCTCCC--
AGGGGAATCCCCT
A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGGGTCTCCC
GGGGATTTCC
A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTCTCCC--
AGGGGATTCCCCT
A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:6
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGTCTCCC
NNNATTGGGGGTNTCCT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGGGTCTCCC
NGGGGATTTCCC
A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGGTCTCCC
GGGGATTTCC-
A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

RELA/MA0107.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGGTCTCCC
GGGAATTTCC-
A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGTCTCCC--
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A C G T A G T C A C G T A G T C A G T C A G T C A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A