Information for 16-AAGTGATGGA (Motif 32)

T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A
Reverse Opposite:
A G C T G A T C G T A C C G T A A C G T G A T C G C T A T G A C G C A T A G C T
p-value:1e-4
log p-value:-9.582e+00
Information Content per bp:1.838
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif297.4
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets83.3 +/- 53.9bp
Average Position of motif in Background100.4 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AAGTGATGGA---
---TGATKGATGR
T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AAGTGATGGA----
--ATGATKGATGRC
T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AAGTGATGGA---
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGATGGA-----
NNANTGATTGATNTTN
A C G T T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGTGATGGA-----
NNANTGATTGATNNNN
A C G T T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

ATF4/MA0833.2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAGTGATGGA----
AAATGATGCAATAA
T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T A C G T A C G T
C T G A C T G A T C G A G C A T C A T G C T G A A G C T C T A G G A T C G T C A C G T A A G C T G T C A G C T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAGTGATGGA--
--MTGATGCAAT
T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AAGTGATGGA--
--ATGATGCAAT
T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AAGTGATGGA---
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGATGGA
NTCAAGTGGN---
A C G T A C G T A C G T T C G A C G T A A C T G C G A T C T A G G T C A C G A T A C T G C T A G C T G A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T