Information for 20-AGTAATAGAT (Motif 37)

C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A A C G T A C G T C G T A A G T C A C G T
p-value:1e-3
log p-value:-7.044e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.0 +/- 0.0bp
Average Position of motif in Background94.9 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX7/MA0680.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGTAATAGAT--
--TAATCGATTA
C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGTAATAGAT--
--TAATTGATTA
C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PAX3/MA0780.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGTAATAGAT--
--TAATCGATTA
C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

CUX2/MA0755.1/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGTAATAGAT--
--TAATCGATAA
C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

CUX1/MA0754.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGTAATAGAT--
--TAATCGATAA
C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AGTAATAGAT-
-NTAATKGTTT
C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T

PB0144.1_Lef1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTAATAGAT----
NNANTGATTGATNTTN
A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

PB0135.1_Hoxa3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGTAATAGAT---
CCTTAATNGNTTTT
A C G T C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

VENTX/MA0724.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTAATAGAT
-CTAATCGNT
C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTAATAGAT----
NNANTGATTGATNNNN
A C G T A C G T C G T A A C T G A C G T C G T A C G T A A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C