Information for 2-GTCCATACGC (Motif 9)

A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T C G T A A C G T A C T G A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.991e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets188.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD2/MA0668.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCCATACGC-
-GCCATATGGT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C A C G T
A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATACGC
RRTCAATA---
A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCCATACGC
--CCATATGT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATACGC
TGTCTAGACG-
A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T

SMAD5/MA1557.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATACGC
TGTCTAGACA-
A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C
C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCCATACGC-
-ACCATATGTT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C A C G T
A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

PB0143.1_Klf7_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCCATACGC-------
AAGCATACGCCCAACTT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCCATACGC--
GCGCATGCGCAC
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCCATACGC-
-ACCATATGTT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C A C G T
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTCCATACGC--
--CCAGACRSVB
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C