Information for 2-ATAGAATG (Motif 8)

C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T C G A T G T A C A C G T C G T A A C G T
p-value:1e-4
log p-value:-9.466e+00
Information Content per bp:1.900
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif3483.5
Percentage of Background Sequences with motif4.96%
Average Position of motif in Targets134.7 +/- 45.5bp
Average Position of motif in Background100.5 +/- 80.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------ATAGAATG-
ATTTGCATACAATGG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

SOX2/MA0143.4/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATAGAATG---
AAACAATGGAA
C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A

SOX13/MA1120.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATAGAATG---
AAACAATGGCA
C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

TEAD4/MA0809.2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATAGAATG---
NCTGGAATGTNN
A C G T C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T A C G T
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G

NKX6-3/MA1530.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATAGAATG--
-TTTAATGAN
C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T
A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATAGAATG---
-TGGAATGYRG
C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T A C G T
A C G T G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ATAGAATG---
AATGCAATAAAATTTAT
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ATAGAATG--
CTGGAATGYA
C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T
G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATAGAATG-----
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATAGAATG-----
GTATAAAAGGCGGGG
A C G T A C G T C G T A A C G T C G T A A C T G C G T A C T G A A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G