Information for 13-ATGATTGACAGA (Motif 15)

C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C G T A G T C C G T A C G T A A C G T A G T C C G T A A C G T
p-value:1e-4
log p-value:-9.406e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets131.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:ATGATTGACAGA
NTGATTGACAGN
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PKNOX1/MA0782.2/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ATGATTGACAGA--
TTTGAGTGACAGCTA
A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:ATGATTGACAGA
BTGABTGACAGS
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:ATGATTGACAGA-
-TGAGTGACAGSC
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

PBX3/MA1114.1/Jaspar

Match Rank:5
Score:0.78
Offset:-2
Orientation:forward strand
Alignment:--ATGATTGACAGA---
GGGTGAGTGACAGGCGG
A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATGATTGACAGA
RTGATTKATRGN
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.71
Offset:4
Orientation:forward strand
Alignment:ATGATTGACAGA
----TTGACAGC
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ATGATTGACAGA
----TTGACAGG
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATGATTGACAGA
TTGATTGN----
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATGATTGACAGA-----
-GGATTGACAGGTCNTT
C G T A A C G T A C T G C G T A A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T