Information for 5-TTTTACTTGCCC (Motif 5)

A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A G T C C G T A C G T A A C T G A C G T C G T A C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TTTTACTTGCCC-
--NNACTTGCCTT
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

PH0063.1_Hoxb8/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTACTTGCCC--
TTTATTAATTGCNNGN
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C A C G T A C G T
G C A T G A C T A C G T C T G A C G A T G C A T C G T A C G T A A C G T C A G T C T A G G A T C G T A C T C A G A T C G C G A T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTTTACTTGCCC
ASTTTCACTTCC--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTTACTTGCCC
ACTTTCACTTTC--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTACTTGCCC
NTTTTACGAGN--
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTTACTTGCCC
RSTTTCRSTTTC--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TTTTACTTGCCC
GTTTTGCTTTCACTTTCC-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTTTACTTGCCC
-TTTAATTGCN-
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
A C G T C G A T A G C T C G A T G C T A C G T A G A C T C A G T C T A G T A G C A T G C A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TTTTACTTGCCC
ASTTTCASTTYC--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTTACTTGCCC
TTTTATTRGN--
A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G A G T C A G T C A G T C
C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C A C G T A C G T