Information for 8-CTTCSCAGGT (Motif 19)

A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T
Reverse Opposite:
C G T A T G A C G T A C A G C T C T A G A T G C A C T G C G T A G T C A C T A G
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.785
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.2 +/- 42.0bp
Average Position of motif in Background158.9 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTTCSCAGGT
NNTTCCCANN-
A C G T A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T
A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTTCSCAGGT
HTTTCCCASG-
A C G T A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTCSCAGGT-
-TTMACACCTT
A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CTTCSCAGGT-
-TGCCCAGNHW
A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T A C G T
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTTCSCAGGT
GCTTCC-----
A C G T A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTTCSCAGGT----
----VCAGGTRDRY
A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ZEB1/MA0103.3/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTCSCAGGT---
--NNGCAGGTGNN
A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTCSCAGGT-
CTTCACACCTA
A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

NFIC/MA0161.2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTTCSCAGGT
TACTTGGCAGA-
A C G T A C G T A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTCSCAGGT---
---NNCAGGTGNN
A G T C A C G T A C G T G T A C T A C G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G