Information for 12-GCRTGTACAAAT (Motif 13)

C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T C A T G A G C T C G T A A G T C G T C A G A C T A T C G G T A C
p-value:1e-8
log p-value:-1.845e+01
Information Content per bp:1.785
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif38.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets100.7 +/- 60.4bp
Average Position of motif in Background78.9 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GCRTGTACAAAT--
TTATGTACTAATAA
C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

FOXA1/MA0148.4/Jaspar

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCRTGTACAAAT--
--ATGTAAACATGT
C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GCRTGTACAAAT
--ATATGCAAAT
C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T
A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCRTGTACAAAT-
---TATGCAAATC
C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCRTGTACAAAT-
GGGCCGTGTGCAAAAA
A C G T A C G T A C G T C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCRTGTACAAAT---
NNGTATGTGCACATNNN
A C G T A C G T C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GCRTGTACAAAT
AAAATACATGTAAAAAT
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

FOXA2/MA0047.3/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GCRTGTACAAAT-
--ATGTAAACATA
C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T A C G T
A C G T A C G T C T G A C G A T C T A G G C A T G T C A G T C A G C T A A G T C G C T A G C A T C G T A

POU2F3/MA0627.2/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCRTGTACAAAT--
-AATATGCAAATAA
C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T A C G T A C G T
A C G T G C T A C G T A G C A T C G T A C A G T C A T G A G T C C G T A C G T A C G T A C G A T C G T A G C T A

MTF1/MA0863.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCRTGTACAAAT
GTGCCGTGTGCAAA-
A C G T A C G T A C G T C A T G T A G C C T G A A C G T A C T G C G A T C T G A G T A C C G T A G T C A C G T A A C G T
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T