| p-value: | 1e-4 |
| log p-value: | -9.617e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 20.00% |
| Number of Background Sequences with motif | 2.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 47.0 +/- 0.0bp |
| Average Position of motif in Background | 20.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AGTCATCTACCA- -GYCATCMATCAT |
|
|
|
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | AGTCATCTACCA RGCCATYAATCA |
|
|
|
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer
| Match Rank: | 3 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AGTCATCTACCA --YCATCMATCA |
|
|
|
JUN::JUNB/MA1132.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AGTCATCTACCA ATGAGTCATC----- |
|
|
|
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AGTCATCTACCA --TCATCAATCA |
|
|
|
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----AGTCATCTACCA GARTGGTCATCGCCC- |
|
|
|
FOSL1::JUNB/MA1137.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----AGTCATCTACCA NNATGAGTCATNN---- |
|
|
|
FOSL2::JUND/MA1144.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AGTCATCTACCA ATGAGTCATC----- |
|
|
|
FOSL1::JUN/MA1128.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----AGTCATCTACCA NNATGAGTCATNN---- |
|
|
|
FOSB::JUNB/MA1135.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---AGTCATCTACCA ATGAGTCATC----- |
|
|
|