Information for 6-GAAACCTCGAGG (Motif 7)

C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G
Reverse Opposite:
A G T C A G T C A G C T A G T C C T A G C T G A A C T G A C T G A C G T A C G T A G C T G A T C
p-value:1e-4
log p-value:-9.278e+00
Information Content per bp:1.633
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif36.36%
Number of Background Sequences with motif1884.8
Percentage of Background Sequences with motif2.39%
Average Position of motif in Targets138.4 +/- 43.9bp
Average Position of motif in Background102.1 +/- 70.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX3/MA0684.2/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAAACCTCGAGG
AAAACCTCAAAT
C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GAAACCTCGAGG
NNGGCGACACCTCNNN-
A C G T A C G T A C G T A C G T A C G T C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C A C G T

HSF4/MA0771.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GAAACCTCGAGG-
GAANNTTCTAGAA
C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G A C G T
T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------GAAACCTCGAGG-
NNTTCTGGAANNTTCTAGAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAACCTCGAGG
-RSCACTYRAG-
C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GAAACCTCGAGG-
TAGAANVTTCTAGAA
A C G T A C G T C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAACCTCGAGG
AASCACTCAA--
C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAACCTCGAGG
ACTGAAACCA-----
A C G T A C G T A C G T C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

ZNF274/MA1592.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GAAACCTCGAGG-
NNCGAGAACTCATACN
A C G T A C G T A C G T C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAACCTCGAGG
AGCCACTCAAG-
C T A G C T G A T C G A T C G A G T A C G T A C A G C T A G T C C T A G C T G A T A C G T A C G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T