| p-value: | 1e-3 |
| log p-value: | -8.872e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 2.3 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 110.0 +/- 0.0bp |
| Average Position of motif in Background | 5.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAGGGATTTTCA NGGGGATTTCCC |
|
|
|
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AAGGGATTTTCA --GGGAATTTCC |
|
|
|
MF0003.1_REL_class/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAGGGATTTTCA --GGGGATTTCC |
|
|
|
RELA/MA0107.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.65 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAGGGATTTTCA --GGGAATTTCC |
|
|
|
PH0137.1_Pitx1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AAGGGATTTTCA-- TTAGAGGGATTAACAAT |
|
|
|
PH0121.1_Obox1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---AAGGGATTTTCA-- TTAAGGGGATTAACTAC |
|
|
|
REL/MA0101.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAGGGATTTTCA -GGGGATTTCC- |
|
|
|
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | AAGGGATTTTCA -NGGGATTA--- |
|
|
|
OTX2/MA0712.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAGGGATTTTCA AAGGGATTAGAA |
|
|
|
DPRX/MA1480.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.59 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AAGGGATTTTCA --NGGATTATCT |
|
|
|