Information for 13-GCAGTTGTGCTC (Motif 19)

A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-9.067e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.0 +/- 0.0bp
Average Position of motif in Background128.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTTGTGCTC
NNCAGTTGNN---
A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T A C G T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCAGTTGTGCTC
GNMCAGGTGTGC--
A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTTGTGCTC
CGCAGCTGCG---
A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGTTGTGCTC
NNNTGGCAGTTGGTNN-
A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTGTGCTC
NNGCAGGTGNN---
A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G A C G T A C G T A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTTGTGCTC
CACGGCAGTTGGTNN-
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCAGTTGTGCTC
GCAGCTGTNN--
A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTTGTGCTC
NNGCAGGTGNN---
A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCAGTTGTGCTC
TGGCAGTTGG----
A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAGTTGTGCTC
GGCVGTTR-----
A C G T A C T G A G T C C G T A A C T G A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C
C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T A C G T A C G T