Information for 3-GTCGACTC (Motif 24)

A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C
Reverse Opposite:
A T C G G T C A A C T G A C G T A G T C A C T G C G T A A G T C
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.938
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets103.7 +/- 51.3bp
Average Position of motif in Background108.2 +/- 52.2bp
Strand Bias (log2 ratio + to - strand density)-2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN29/MA1602.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GTCGACTC---
CGTCTACACGGG
A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T A C G T
A G T C C T A G A G C T G T A C A G C T G C T A G A T C C T G A A T G C T C A G C T A G T A C G

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCGACTC-------
TACGAGACTCCTCTAAC
A C G T A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

MSANTD3/MA1523.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCGACTC--
GTACACTCAC
A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCGACTC----
TCCGTCGCTTAAAAG
A C G T A C G T A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GTCGACTC-
NNTGTGGATTSS
A C G T A C G T A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTCGACTC-----
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

FOXH1/MA0479.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCGACTC--
TGTGGATTNNN
A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

NKX2-2/MA1645.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCGACTC-----
TAACCACTCAAGAA
A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GTCGACTC
ATCCAC--
A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTCGACTC------
NNGGCGACACCTCNNN
A C G T A C G T A C T G A C G T A G T C A C T G C G T A A G T C A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C