Information for 2-CABCAGATGCAC (Motif 2)

G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T C T A G A T G C C G T A C G A T G T A C C G A T A C T G T C G A C G A T A C T G
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.735
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif575.2
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets93.5 +/- 54.2bp
Average Position of motif in Background98.1 +/- 88.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CABCAGATGCAC
-ACCAGATGGC-
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CABCAGATGCAC
--CCATATGT--
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CABCAGATGCAC
-DMCAGATGKS-
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
A C G T C G T A T G A C A G T C C G T A A C T G G T C A A C G T A C T G A C G T A T G C A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CABCAGATGCAC
ATTCCAGATGTTT
A C G T G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
C G T A C G A T C G A T T G A C G T A C C G T A A C T G T G C A G A C T A C T G A C G T A G C T G C A T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CABCAGATGCAC
-ANCAGCTG---
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CABCAGATGCAC
--GHATATKCAT
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

SNAI3/MA1559.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CABCAGATGCAC
-AACAGGTGCA-
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
A C G T C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A A C G T

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CABCAGATGCAC
--MCAGCTGBYH
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C G T G A C T G A T C

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CABCAGATGCAC
NAMCAGCTGK--
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T A C G T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CABCAGATGCAC
CACCTGTTGC--
G T A C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A T C G A G T C C G T A A G T C
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C A C G T A C G T