Information for 14-CCAGAAAGCCAG (Motif 15)

A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G A T C G A G T C A C G T A G C T A G C T A G T C A C G T A C T G A C T G
p-value:1e-12
log p-value:-2.836e+01
Information Content per bp:1.888
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets108.6 +/- 44.8bp
Average Position of motif in Background102.7 +/- 43.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB26/MA1579.1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCAGAAAGCCAG
TACTCCAGAAAAGAT-
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCAGAAAGCCAG
RHHCAGAGAGGB--
A C G T A C G T A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAAAGCCAG
ATGCCAGACN-----
A C G T A C G T A C G T A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCAGAAAGCCAG
CCAGACAG----
A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCAGAAAGCCAG
CCAGACRSVB--
A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAAAGCCAG
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAAAGCCAG
ATTTCCCAGVAKSCY--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCAGAAAGCCAG
ACAGGAAGTG--
A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T

Prdm15/MA1616.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCAGAAAGCCAG----
-AGGAAAACCTGGAGC
A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAAAGCCAG
TCTAGACA-----
A C G T A G T C A G T C C G T A A C T G C T G A C T G A C G T A C T A G A T G C G T A C C G T A A C T G
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T