Information for 2-VGCTGAHACTCC (Motif 2)

T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
Reverse Opposite:
C T A G A C T G C G T A A T C G A C G T C A T G A C G T A G T C C G T A A C T G A T G C A C G T
p-value:1e-6
log p-value:-1.501e+01
Information Content per bp:1.738
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif808.0
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets123.5 +/- 13.8bp
Average Position of motif in Background101.0 +/- 85.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:VGCTGAHACTCC
-GCTGTTACCCT
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:VGCTGAHACTCC
VGCTGWCAVB--
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:VGCTGAHACTCC
TGCTGACTCA--
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:VGCTGAHACTCC
-ACTGAAACCA-
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:VGCTGAHACTCC
--TTGACAG---
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:VGCTGAHACTCC
ARNTGACA----
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----VGCTGAHACTCC
AAAATGCTGACT----
A C G T A C G T A C G T A C G T T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:VGCTGAHACTCC
-RHTGWCAR---
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:VGCTGAHACTCC
NGCTN-------
T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----VGCTGAHACTCC-
NNNCAGCTGTCAATATN
A C G T A C G T A C G T A C G T T C G A A T C G A G T C A C G T C T A G C G T A G A T C C G T A A T G C G C A T G T A C A G T C A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C