Information for 7-AAGCCTACATKV (Motif 8)

G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C
Reverse Opposite:
A C G T G T A C G T C A C A G T C T A G A G C T G T C A A C T G C A T G G T A C A G C T A C G T
p-value:1e-5
log p-value:-1.232e+01
Information Content per bp:1.646
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif38.46%
Number of Background Sequences with motif1463.7
Percentage of Background Sequences with motif2.09%
Average Position of motif in Targets63.4 +/- 49.5bp
Average Position of motif in Background99.5 +/- 83.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AAGCCTACATKV
GATAACATCCTAGTAG-
A C G T A C G T A C G T A C G T A C G T G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AAGCCTACATKV
BCAGACWA-----
A C G T G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAGCCTACATKV
AGGCCTNG----
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAGCCTACATKV-----
ANTTNTACATGTANTTN
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAGCCTACATKV-----
ANTNTTACATGTATNTA
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C A C G T A C G T A C G T A C G T A C G T
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AAGCCTACATKV
AGGCCTAG----
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AAGCCTACATKV------
-AATATACATGTAATATA
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AAGCCTACATKV
AAGCTTG-----
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AAGCCTACATKV
AAGGATATNTN-
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AAGCCTACATKV------
-AAAATACATGTAATACT
G T C A C T G A A C T G G A T C G T A C A C G T C T G A G A T C G T C A C A G T A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T