Information for 13-CGGTGTCACA (Motif 24)

A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
Reverse Opposite:
A C G T A T C G C G A T A C T G G T C A A G T C C G T A A G T C A G T C C T A G
p-value:1e-5
log p-value:-1.364e+01
Information Content per bp:1.888
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif51.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets120.3 +/- 48.2bp
Average Position of motif in Background108.8 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.88
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CGGTGTCACA---
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGGTGTCACA
VGCTGGCA--
A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGTGTCACA
AGGTGTCA--
A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T

TBX3/MA1566.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGGTGTCACA
GAGGTGTGAA-
A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A A C G T

TBX5/MA0807.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGGTGTCACA
AGGTGTGA--
A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

TBX6/MA1567.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGTGTCACA
GAGGTGTGAA-
A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGTGTCACA
AGGTGTGAAM
A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGGTGTCACA-
-VBTGWCAGCB
A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A A C G T
A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGTGTCACA
AAGGTGTGAAA
A C G T A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGTGTCACA--
AGGTGHCAGACA
A G T C A C T G A C T G A C G T A C T G A C G T A G T C C G T A A T G C C G T A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A