Information for 3-GAACGCAGAA (Motif 6)

A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C T G A G T C A C T G A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.422e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets192.0 +/- 0.0bp
Average Position of motif in Background184.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAACGCAGAA----
--AAACAGAAGCAG
A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAACGCAGAA
TGAACTCA---
A C G T A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A
A G C T C T A G G T C A T G C A T G A C G A C T A G T C C T G A A C G T A C G T A C G T

ZNF317/MA1593.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAACGCAGAA-
TAACAGCAGACT
A C G T A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A A C G T
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T

ZNF136/MA1588.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAACGCAGAA---
GTCAACCAAGAATTC
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
C A T G G A C T G A T C G T C A C T G A A G T C G A T C G T C A T C G A C T A G C T G A C G T A A G C T G C A T A G T C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAACGCAGAA
TBGCACGCAA--
A C G T A C G T A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T

ELF2/MA1483.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAACGCAGAA---
-AACCCGGAAGTA
A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T C G T A G C T A G T A C T A G C G T A C A C T G C T A G T C G A G C T A T C A G G A C T T C G A

ELF4/MA0641.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAACGCAGAA---
-AACCCGGAAGTG
A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T C G T A G C T A G T A C T A G C T G A C C T A G A C T G C G T A G T C A T C A G A G C T C T A G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GAACGCAGAA
-CACGCA---
A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A
A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAACGCAGAA---
-AAAGRGGAAGTG
A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GAACGCAGAA---
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A G T C A C T G A G T C C G T A A C T G C G T A C G T A A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A