Information for 12-GGATTACACTCT (Motif 18)

C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
Reverse Opposite:
C G T A A T C G C G T A C T A G A C G T A C T G A C G T C G T A C T G A A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.831e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.4 +/- 53.7bp
Average Position of motif in Background68.3 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)2.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX2/MA1547.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACACTCT
GGGATTAN-----
A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T A C G T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACACTCT
NGGATTAN-----
A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGATTACACTCT
AAGGGATTAGAA---
A C G T A C G T A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGATTACACTCT
RGGATTAR-----
A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACACTCT
CGGATTAN-----
A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACACTCT
NGGGATTA------
A C G T A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACACTCT
VRGGATTARN----
A C G T A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGATTACACTCT
GGGATTANN----
A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGATTACACTCT
GNGGATTAGN----
A C G T A C G T C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGATTACACTCT
GGATTAGC----
C T A G A C T G C G T A A G C T A C G T C G T A A G T C G T C A A G T C A C G T A T G C A C G T
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T