Information for 18-ATGATCTACT (Motif 33)

C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A A C G T
p-value:1e-3
log p-value:-7.323e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets178.0 +/- 0.0bp
Average Position of motif in Background98.2 +/- 78.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGATCTACT----
TTGACCTANTTATN
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:ATGATCTACT--
BTGACCTAVTTW
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGATCTACT-
-TGACCTARTT
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGATCTACT-
-TGACCTARTT
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

DPRX/MA1480.1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ATGATCTACT
NGGATTATCT---
A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T
T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T A C G T A C G T

NR1D1/MA1531.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATGATCTACT-----
NTGACCTACTGACCC
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T T C A G T G C A G A T C G T A C A G C T T G C A A T G C C G A T T C A G T G C A G A T C G T A C A G T C

ZKSCAN1/MA1585.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATGATCTACT--
--CACCTACTAT
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A T G C T C G A G T A C T A G C A C G T C G T A G A T C A C G T T C G A A G C T

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATGATCTACT--
RTGATTKATRGN
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T
C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

RORB/MA1150.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATGATCTACT-
NTGACCTAATT
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T
C T A G G A C T C T A G T C G A G A T C T G A C G A C T T G C A G C T A C G A T G C A T

RORC/MA1151.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGATCTACT---
-TGACCTANTTAN
C G T A A C G T A C T G C G T A A C G T A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T