Information for 21-ATCCTTGACAAA (Motif 37)

C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C G T A A C T G A C T G C G T A A C G T
p-value:1e-3
log p-value:-7.596e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background88.9 +/- 54.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:ATCCTTGACAAA
----TTGACAG-
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATCCTTGACAAA----
-ACCGTGACTAATTNN
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

NFIC/MA0161.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:ATCCTTGACAAA
-TACTTGGCAGA
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ATCCTTGACAAA
----TTGACAGG
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:ATCCTTGACAAA
---CTTGGCAA-
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATCCTTGACAAA
---RHTGWCAR-
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATCCTTGACAAA
----TTGACAGC
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ATCCTTGACAAA
--ARNTGACA--
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ATCCTTGACAAA
--NCGTGACN--
C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----ATCCTTGACAAA
AAGATATCCTT------
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C T G C G T A A G T C C G T A C G T A C G T A
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T