Information for 23-GGCTCACTAG (Motif 37)

A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A C T G A C G T A C T G C G T A A C T G A G T C A G T C
p-value:1e-2
log p-value:-6.883e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets78.0 +/- 0.0bp
Average Position of motif in Background66.0 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCTCACTAG-
-GTTAACTAGN
A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCTCACTAG----
AGCTGTTAACTAGCCGT
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCTCACTAG
AGCTCATTAT
A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCTCACTAG
NNCTCATTAT
A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCACTAG
NGGATTAN---
A C G T A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGCTCACTAG-----
GANGTTAACTAGTTTNN
A C G T A C G T A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

PH0151.1_Pou6f1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGCTCACTAG----
NNNACCTCATTATCNTN
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGCTCACTAG---
CGAAGCACACAAAATA
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCTCACTAG
NGCTN-----
A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGCTCACTAG
NGCTAATTAG
A C T G A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C T G
A T G C T A C G A G T C G A C T T G C A C T G A G A C T A C G T C T G A T C A G