| p-value: | 1e-11 |
| log p-value: | -2.737e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 6.0 |
| Percentage of Target Sequences with motif | 0.40% |
| Number of Background Sequences with motif | 0.6 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 87.0 +/- 12.5bp |
| Average Position of motif in Background | 149.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 1 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAAATATTCAGT -GAATATTCAT- |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAAATATTCAGT -GHATATKCAT- |
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Arid5a/MA0602.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GAAATATTCAGT NNTNNCAATATTAG-- |
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PB0002.1_Arid5a_1/Jaspar
| Match Rank: | 4 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GAAATATTCAGT NNTNNCAATATTAG-- |
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Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GAAATATTCAGT TGAATTATGCAT- |
|
|
|
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----GAAATATTCAGT--- NANTGGAAAAANTGAGTCAN |
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|
MF0010.1_Homeobox_class/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAAATATTCAGT -AATTATT---- |
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|
|
POU4F1/MA0790.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.58 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GAAATATTCAGT CATTAATTATTCAT- |
|
|
|
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GAAATATTCAGT TCATGAATWATTCAT- |
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POU4F3/MA0791.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.56 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GAAATATTCAGT CTCATTAATTATGCAT- |
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