Information for 9-AGGCTCCGTA (Motif 23)

C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C T G A C T G C G T A A C T G A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.713e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:2
Orientation:forward strand
Alignment:AGGCTCCGTA
--GCTCCG--
C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTCCGTA--------
YCAGGCWCAGTACCAGGCTC
A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGGCTCCGTA
-GGCGCGCT-
C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGCTCCGTA
-NGCTN----
C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGGCTCCGTA---
TACGAGACTCCTCTAAC
A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCTCCGTA--
NNNNTTGGCGCCGANNN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCTCCGTA--
NNNNTTGGCGCCGANNN
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGGCTCCGTA
TWVGGTCCGC-
A C G T C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A
A G C T C G A T T A C G A T C G A T C G C A G T A G T C A G T C A C T G T A G C A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGGCTCCGTA---
-GGCTCYAKCAYC
C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A A C G T A C G T A C G T
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGGCTCCGTA
TTTGGCGCCAAA
A C G T A C G T C G T A A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C G T C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A