Information for 1-TTTATCCC (Motif 6)

A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C G A T C G T A C G T A C T G A
p-value:1e-3
log p-value:-9.026e+00
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1826.6
Percentage of Background Sequences with motif2.30%
Average Position of motif in Targets102.0 +/- 22.4bp
Average Position of motif in Background98.3 +/- 70.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0137.1_Pitx1/Jaspar

Match Rank:1
Score:0.75
Offset:-4
Orientation:reverse strand
Alignment:----TTTATCCC-----
NTTGTTAATCCCTCTNN
A C G T A C G T A C G T A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATCCC----
NANANTTAATCCCNNNN
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.74
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATCCC----
GANNATTAATCCCTNNN
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTTATCCC
CTTAATCCC
A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTTATCCC
ATAATCCC
A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PH0123.1_Obox3/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTATCCC-----
ATAGTTAATCCCCCNNA
A C G T A C G T A C G T A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0121.1_Obox1/Jaspar

Match Rank:7
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TTTATCCC-----
NTAGTTAATCCCCTTAN
A C G T A C G T A C G T A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTTATCCC----
GNNNATTAATCCCTNCN
A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A

OTX2/MA0712.2/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTATCCC--
NNCTAATCCCNN
A C G T A C G T A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C A C G T A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

PITX2/MA1547.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:TTTATCCC
ATAATCCC
A G C T A C G T A C G T C G T A A C G T A G T C A G T C A G T C
G T C A C G A T C T G A C G T A A C G T A G T C A G T C T G A C