Information for 12-GCACTCCACTTT (Motif 14)

A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C T G A C G T A C T G A C T G C G T A A C T G A C G T A C T G A G T C
p-value:1e-3
log p-value:-9.011e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background86.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCACTCCACTTT
NSCACTYVAV---
A C G T A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCACTCCACTTT-
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCACTCCACTTT
---ATCCAC---
A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCACTCCACTTT
RSCACTYRAG---
A C G T A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCACTCCACTTT
AASCACTCAA----
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCACTCCACTTT
ACCACTCAAAA--
A C G T A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCACTCCACTTT
AGCCACTCAAG---
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCACTCCACTTT
MRSCACTYAA----
A C G T A C G T A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCACTCCACTTT--
----ACCACTTGAA
A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCACTCCACTTT
SSAATCCACANN
A C T G A G T C C G T A A G T C A C G T A G T C A G T C C G T A A G T C A C G T A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C