Information for 5-CCTTTTYTTGTC (Motif 5)

G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C
Reverse Opposite:
A C T G G T C A A G T C G T C A C G T A T C A G C G T A G T C A C T G A C G T A C A T G C A T G
p-value:1e-5
log p-value:-1.286e+01
Information Content per bp:1.692
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif29.41%
Number of Background Sequences with motif875.9
Percentage of Background Sequences with motif1.37%
Average Position of motif in Targets127.8 +/- 8.1bp
Average Position of motif in Background99.7 +/- 66.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CCTTTTYTTGTC--
TNTTATCTTATCTT
G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C A C G T A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

ZNF384/MA1125.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCTTTTYTTGTC-
-TTTTTTTTTANN
G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C A C G T
A C G T C G A T C G A T C G A T C G A T G C A T G C A T C G A T G C A T C A G T G C T A C G T A G C T A

GATA4/MA0482.2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCTTTTYTTGTC
TTCCTTATCTTT--
A C G T A C G T G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTTTTYTTGTC-
NNATTTTATTGGNN
A C G T G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C A C G T
C G T A C G T A C G T A C G A T C G A T C G A T G C A T T G C A G C A T C G A T C T A G C A T G G C A T G C A T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTTTTYTTGTC---
NNCTTTGTTTTGNTNNN
A C G T A C G T G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTTTTYTTGTC
CCATTGTTTT---
A C G T G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCTTTTYTTGTC--
NTNAATTTTATTGNATT
A C G T A C G T A C G T G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCTTTTYTTGTC
YCTTATCTBN--
G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C
A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTTTTYTTGTC
TTCTTATCTTT--
A C G T G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C
C G A T A G C T A G T C G C A T G C A T C G T A G C A T A G T C G C A T A G C T G A C T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCTTTTYTTGTC
NNCTTATCTN---
A C G T G A T C G T A C A C G T A G C T C A G T A C G T A G T C C G A T A C G T C T A G A C G T G T A C
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T