Information for 18-GGATATAACC (Motif 33)

A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C G T C G T A A C G T C G T A A C G T A G T C A G T C
p-value:1e-2
log p-value:-6.806e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif44.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background117.4 +/- 137.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0163.1_Six6_2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGATATAACC----
ATGGGATATATCCGCCT
A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T G C A C G A T A T C G T A C G A C T G T C G A G A C T C T G A A C G T G T C A A G C T G T A C A G T C T C A G G A T C G A T C C A G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GGATATAACC
AAGGATATNTN-
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGATATAACC
GGAAATTCCC
A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

Six3/MA0631.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGATATAACC---
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGATATAACC---
GATAGGGTATCACTAAT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PB0059.1_Six6_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGATATAACC---
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGATATAACC---
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0012.1_Elf3_1/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGATATAACC
AACAAGGAAGTAA--
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C
C G A T C G T A G T A C T G C A T G C A C T A G C A T G C G T A G C T A T C A G G A C T C G T A T C G A A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGATATAACC---
AATAGGGTATCAATATT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGATATAACC---
AATAGGGTATCAATTAT
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C G T C G T A C G T A A G T C A G T C A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T