Information for 2-AGCTCGAC (Motif 29)

C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C T G C G T A A C T G A G T C A C G T
p-value:1e-2
log p-value:-4.961e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif60.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets63.0 +/- 0.0bp
Average Position of motif in Background115.2 +/- 67.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF449/MA1656.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGCTCGAC---
CCAAGCCCAACCAG
A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C A C G T A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGCTCGAC-
-TCTAGACA
C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C A C G T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTCGAC
NGCTN---
C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

ZNF135/MA1587.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGCTCGAC-------
-CCTCGACCTCCTGA
C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C A G T C A G C T A G T C T C A G C T G A T A G C A G T C A G C T A T G C G A T C G A C T T C A G C T G A

PAX5/MA0014.3/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCTCGAC---
GAGCGTGACCCC
A C G T C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C A C G T A C G T A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AGCTCGAC--
NHRTCACGACDN
A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCTCGAC----
GGCTCYAKCAYC
C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCTCGAC
AAGCTTG--
A C G T C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:AGCTCGAC
--ATCCAC
C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AGCTCGAC
NAACAGCTGG--
A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A G T C A C T G C G T A A G T C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T