Information for 5-AKGGSCCWTAGC (Motif 5)

G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A G C T A A C T G C T A G A T C G A G T C A G T C G T C A A C G T
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.669
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif31.25%
Number of Background Sequences with motif1597.5
Percentage of Background Sequences with motif2.28%
Average Position of motif in Targets116.8 +/- 55.8bp
Average Position of motif in Background101.0 +/- 77.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AKGGSCCWTAGC---
CANAGNNCAAAGTCCA
A C G T G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

THRB/MA1574.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AKGGSCCWTAGC----
-GGGGTCAAAGGTCAT
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A A G C T

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AKGGSCCWTAGC---
-GGGGTCAAAGGTCA
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

PPARD/MA1550.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AKGGSCCWTAGC----
AGGGGTCAAAGGTCAA
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A G T C A

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AKGGSCCWTAGC---
-GGGGTCAAAGGTCA
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AKGGSCCWTAGC---
VNAGGKCAAAGGTCA
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A

Rxra/MA0512.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AKGGSCCWTAGC---
-GGGGTCAAAGGTCA
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AKGGSCCWTAGC---
-TGGGGCAAAGGTCA
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T A C G T A C G T
A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

TCF7L1/MA1421.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AKGGSCCWTAGC
AAAGATCAAAGG
G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C
G C T A C T G A C G T A A T C G C G T A A C G T G T A C T G C A C G T A C T G A A T C G C T A G

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----AKGGSCCWTAGC-
GGCGAGGGGTCAAGGGC
A C G T A C G T A C G T A C G T G T C A C A G T C T A G C T A G T A G C A G T C G T A C C G A T C G A T C G T A A C T G A G T C A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C