Information for 11-CCCTGCCTCAGA (Motif 17)

A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T G T A C G C A T A C T G C G T A A C T G A T C G A G T C C G T A T A C G C T A G C T A G
p-value:1e-7
log p-value:-1.797e+01
Information Content per bp:1.773
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif142.1
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets108.5 +/- 59.1bp
Average Position of motif in Background95.4 +/- 53.1bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCTGCCTCAGA---
-ATTGCCTCAGGCCA
A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCCTGCCTCAGA---
-NNCGCCTCAGGCNN
A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A A C G T A C G T A C G T
A C G T T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCTGCCTCAGA-----
GCCTCCTCCMTCWGACTGKS
A C G T A C G T A C G T A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCCTGCCTCAGA-
--AAACCACAGAN
A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCCTCAGA
KGCCCTTCCCCA--
A C G T A C G T A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCCTGCCTCAGA-
---TTCCKNAGAA
A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A A C G T
A C G T A C G T A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCTGCCTCAGA--
TCACCCCGCCCCAAATT
A C G T A C G T A C G T A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

ZFP57/MA1583.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCTGCCTCAGA
GCATTGCCGCAGT
A C G T A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCCTGCCTCAGA-
-MCTCCCMCRCAB
A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A A C G T
A C G T G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCTGCCTCAGA
--KGGCCYCWTD
A G T C A G T C A G T C C G A T T A C G A T G C G T A C C G A T A G T C C G T A A C T G C G T A
A C G T A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A