Information for 1-ATTATHTCAGCC (Motif 1)

C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G A T A C T G C T G A C G T A G T C A C G A T C G T A C G T A A G C T
p-value:1e-7
log p-value:-1.652e+01
Information Content per bp:1.827
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif265.4
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets82.8 +/- 66.5bp
Average Position of motif in Background106.5 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0021.1_Dlx2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATTATHTCAGCC
GGAATAATTACCTCAG--
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATTATHTCAGCC
GAGGTAATTACCTCAG--
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------ATTATHTCAGCC
ANGNTAATTANCNCAN--
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----ATTATHTCAGCC
ATTAATTANCTCAN--
A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:5
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------ATTATHTCAGCC
ACGGTAATTAGCTCAG--
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T A C G T

PH0174.1_Vax1/Jaspar

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------ATTATHTCAGCC
ACGTTAATTAACCCAG--
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T G C A T A G C T C A G C G A T G A C T G T C A G C T A C G A T C A G T C T G A T C G A A G T C G A T C G A T C C G T A C T A G A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATTATHTCAGCC
CAGGTAATTACCTCAG--
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:ATTATHTCAGCC
-------CAGCC
C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PH0081.1_Pdx1/Jaspar

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------ATTATHTCAGCC
AAGGTAATTAGCTCAT--
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
T G C A T G C A C T A G A T C G G A C T T G C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T T A G C C G T A C A G T A C G T A C G T

PH0058.1_Hoxb3/Jaspar

Match Rank:10
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------ATTATHTCAGCC
TNNNACTAATTAGNTCA---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A C G T C G T A C A G T G A C T A G C T A G T C C G T A A C T G A G T C A G T C
G C A T G A T C A G T C G T C A T C G A A T G C G A C T G T C A C G T A C G A T A C G T C T G A T A C G A T G C A C G T A G T C C G T A A C G T A C G T A C G T