Information for 12-GCCATGCAAC (Motif 30)

A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C T G A G T C C G T A A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.164e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif56.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets168.0 +/- 0.0bp
Average Position of motif in Background127.7 +/- 133.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0147.1_Max_2/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCCATGCAAC--
GTGCCACGCGACTG
A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCATGCAAC--
SCCTAGCAACAG
A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCATGCAAC-
TGTTKCCTAGCAACM
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

HLF/MA0043.3/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCATGCAAC--
TTGTTATGCAACAA
A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T
C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

CDX1/MA0878.2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCATGCAAC
GGCCATAAAAC
A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C
C A T G C T A G A G T C T G A C C G T A A C G T C T G A C G T A C T G A G T C A A G T C

POU5F1/MA1115.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCCATGCAAC--
-ATATGCAAATT
A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T
A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCATGCAAC
TBGCACGCAA-
A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCATGCAAC
GGYAATGAAA-
A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T

YY2/MA0748.2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCCATGCAAC
CGCCGCCATNN---
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C
A T G C C A T G A T G C T A G C C T A G A G T C A T G C T C G A A G C T A T G C C A G T A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCATGCAAC---
-AGATGCAATCCC
A C T G A G T C A G T C C G T A A C G T A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C