Information for 3-GTCCCGACTC (Motif 9)

C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C
Reverse Opposite:
C T A G C T G A T A C G A C G T A G T C C T A G A C T G A C T G C G T A A G T C
p-value:1e-11
log p-value:-2.564e+01
Information Content per bp:1.866
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif49.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets73.0 +/- 47.9bp
Average Position of motif in Background94.0 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.64
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GTCCCGACTC
NHRTCACGACDN
A C G T A C G T C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GTCCCGACTC-
GAGGTCATGACCTC
A C G T A C G T A C G T C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C A C G T
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCCCGACTC-------
TACGAGACTCCTCTAAC
C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTCCCGACTC-
GAGGTCATGACCTC
A C G T A C G T A C G T C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C A C G T
T C A G C T G A C A T G C A T G A C G T A G T C C T G A A G C T T C A G T G C A T G A C G T A C A G C T A G T C

SMAD5/MA1557.1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGACTC
TGTCTAGACA-
A C G T C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTCCCGACTC-
-TGCTGAGTCA
C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C A C G T
A C G T C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GTCCCGACTC-
NNCNTGACCCCGCTCT
A C G T A C G T A C G T A C G T A C G T C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCCCGACTC
YGGCCCCGCCCC
A C G T A C G T C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C
A G T C C T A G C T A G A G T C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCCCGACTC-
-TGCTGACTCA
C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C A C G T
A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTCCCGACTC
CGTCTAGACA-
A C G T C T A G C G A T A G T C G T A C A G T C A C T G C G T A A G T C A G C T A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T