Information for 8-TTTGTGGTCACT (Motif 10)

A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
Reverse Opposite:
C T G A A C T G A C G T A T C G C G T A A G T C G A T C G T C A A G T C G T C A G T C A C T G A
p-value:1e-5
log p-value:-1.276e+01
Information Content per bp:1.667
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif35.71%
Number of Background Sequences with motif1178.4
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets150.0 +/- 67.1bp
Average Position of motif in Background99.8 +/- 68.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTTGTGGTCACT
CGTGGGTGGTCC--
A C G T A C G T A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTGGTCACT
NNHTGTGGTTWN-
A C G T A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTTGTGGTCACT---
NTNNNGGGGTCANGNNN
A C G T A C G T A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTGTGGTCACT
YSTGGGTGGTCT--
A C G T A C G T A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
A G T C A T C G G C A T C A T G A C T G A T C G C G A T C T A G A C T G A G C T T G A C G A C T A C G T A C G T

GLI3/MA1491.1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGTGGTCACT
CGNCGTGGGTGGTCN--
A C G T A C G T A C G T A C G T A C G T A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTTGTGGTCACT
-CTGTGGTTTN-
A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTTGTGGTCACT
GCTGTGGTTT--
A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

GLI2/MA0734.2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGTGGTCACT
CGNCGTGGGTGGTCN--
A C G T A C G T A C G T A C G T A C G T A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTTGTGGTCACT
--AGRGGTCA--
A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TTTGTGGTCACT---
CTCCAGGGGTCAATTGA
A C G T A C G T A G C T C A G T A C G T T C A G A C G T C A T G A C T G A C G T T A G C C G T A T A G C A G C T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A