Information for 12-TGACATTAACTG (Motif 20)

A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets86.6 +/- 47.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGACATTAACTG-
GGAGGTCATTAATTAT
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G A C G T
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

CREB1/MA0018.4/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGACATTAACTG
NATGACATCANNN-
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGACATTAACTG
TTGACAG------
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGACATTAACTG
-CTCATTAAA--
A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
A C G T T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T A C G T

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGACATTAACTG
--YCATTAMC--
A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGACATTAACTG
ARNTGACA-------
A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGACATTAACTG
ATGACCTTGA---
A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

NR2F2/MA1111.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGACATTAACTG
NNTGACCTTTN---
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
G A C T G A C T G A C T C T A G T G C A G A T C G T A C G A C T G C A T C A G T C T A G A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGACATTAACTG
NATGACCTTGA---
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGACATTAACTG
GGCCATTAAC--
A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A C G T A A G T C A C G T A C T G
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T A C G T