Information for 24-AWABVCATCGAT (Motif 39)

G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T
Reverse Opposite:
G C T A C G A T A G T C C T A G G T C A A C G T A T C G A C G T T A G C C A G T G C A T C G A T
p-value:1e-3
log p-value:-6.953e+00
Information Content per bp:1.555
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1171.1
Percentage of Background Sequences with motif1.70%
Average Position of motif in Targets97.0 +/- 73.7bp
Average Position of motif in Background95.9 +/- 80.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:1
Score:0.73
Offset:5
Orientation:forward strand
Alignment:AWABVCATCGAT---
-----TATCGATNAN
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T G A T C C T A G C T G A A G C T G T C A T C G A C G T A

CUX1/MA0754.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AWABVCATCGAT--
----NTATCGATTA
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:3
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:AWABVCATCGAT----
------ATTGATTYND
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AWABVCATCGAT-----
TCACCCATCAATAAACA
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.66
Offset:4
Orientation:forward strand
Alignment:AWABVCATCGAT--
----NTATYGATCH
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

CUX2/MA0755.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AWABVCATCGAT--
----TTATCGATTA
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:AWABVCATCGAT-
-----TATTGAYY
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AWABVCATCGAT---
---GYCATCMATCAT
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AWABVCATCGAT----
---GTCATCAATCATT
G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AWABVCATCGAT---
NNCATTCATTCATNNN
A C G T G C T A C G T A G T C A A C T G T G C A A T G C G T C A C A G T G A T C T C A G C G T A C G A T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T