Information for 15-TTGAATTTTTAT (Motif 16)

A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T
Reverse Opposite:
C G T A A C G T C T G A T G C A C G T A C T G A C G T A A C G T C A G T A G T C C G T A C G T A
p-value:1e-10
log p-value:-2.335e+01
Information Content per bp:1.878
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif89.1
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets90.2 +/- 37.3bp
Average Position of motif in Background103.0 +/- 52.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----TTGAATTTTTAT
NNNTATTGAATTGNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTGAATTTTTAT
TTGACTTTT---
A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTGAATTTTTAT---
ATGAATATTCATGAG
A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T A C G T A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTGAATTTTTAT
ATTTGAATT-----
A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T

ONECUT3/MA0757.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTGAATTTTTAT
NTTATTGATTTTTT--
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T
C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGAATTTTTAT-
CCTTGCAATTTTTNN
A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T A C G T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTGAATTTTTAT----
TNTAATTTGCATANNN
A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU2F2/MA0507.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTGAATTTTTAT--
-TTCATTTGCATAT
A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T A C G T A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGAATTTTTAT-
NNATNAATTGTTTNN
A C G T A C G T A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGAATTTTTAT------
--NNAATTTTATTGGNTN
A C G T A C G T A C T G G T C A C G T A A C G T A G C T A C G T A C G T G A C T C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T