Information for 9-ACGTTTCATG (Motif 24)

C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G C G T A C G T A C G T A A G T C A C T G A C G T
p-value:1e-3
log p-value:-7.718e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets145.0 +/- 0.0bp
Average Position of motif in Background100.7 +/- 42.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ACGTTTCATG---
---TTTCATKGCC
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACGTTTCATG---
---TTTCATTRCC
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ACGTTTCATG---
---TTTTATGGCB
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G A T G C A T G A C T G C T A A G C T C A T G C T A G A T G C A G T C

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACGTTTCATG--
--NTTTTATDRG
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ACGTTTCATG
TGGTTTCAGT
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Arid3a/MA0151.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACGTTTCATG
---TTTAAT-
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ACGTTTCATG---
---TTTTATGGCM
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACGTTTCATG--
--ATTTCCTGTN
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

CDX1/MA0878.2/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ACGTTTCATG---
--GTTTTATGGCC
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T T C A G C A G T A G C T A C G T A G C T C G T A A C G T A C T G T C A G G A T C G T A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ACGTTTCATG--
--ATTTCCTGTN
C G T A A G T C A C T G A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G