Information for 19-GAGCATGAGTGC (Motif 20)

A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
p-value:1e-4
log p-value:-9.808e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets11.0 +/- 0.0bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:GAGCATGAGTGC--
---CTTGAGTGGCT
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAGCATGAGTGC--
----GTGAGTGNAC
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAGCATGAGTGC--
----TTGAGTGSTT
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

NKX2-5/MA0063.2/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGCATGAGTGC-
--NNTTGAGTGNN
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GAGCATGAGTGC-
---CTYRAGTGSY
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAGCATGAGTGC--
----TTAAGTGCTT
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

NKX2-2/MA1645.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGCATGAGTGC---
-NNNTTGAGTGGNNN
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T
A C G T C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

ZNF274/MA1592.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGCATGAGTGC-----
-GGTATGAGTTCTCGCT
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G T C A G A G C T C T G A A C G T T C A G C T G A T A C G C A G T G A C T G T A C A C G T G A T C C T A G A G T C C A G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGCATGAGTGC----
NNGCGTGTGTGCNGCN
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

NRF(NRF)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAGCATGAGTGC
GCGCATGCGCAC
A C T G C G T A A C T G A G T C C G T A A C G T A C T G C G T A A C T G A C G T A C T G A G T C
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C