Information for 16-ACATGCTAGTAA (Motif 17)

C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A G T C A C G T C G T A A C T G A G T C C G T A A C G T A C T G A C G T
p-value:1e-3
log p-value:-8.828e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets172.0 +/- 0.0bp
Average Position of motif in Background105.8 +/- 35.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0181.1_Spdef_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ACATGCTAGTAA
GATAACATCCTAGTAG
A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACATGCTAGTAA-
-TATGCWAATBAV
C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C G T
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

MXI1/MA1108.2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACATGCTAGTAA
GACACATGGC-----
A C G T A C G T A C G T C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACATGCTAGTAA----
ACATGCTACCTAATAC
C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ACATGCTAGTAA-
-WATGCAAATGAG
C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C G T
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

POU1F1/MA0784.1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACATGCTAGTAA-
AATATGCAAATTAG
A C G T C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ACATGCTAGTAA---
----GCTCGTAAAAA
C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACATGCTAGTAA
TTATGCAAATTA
C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

PH0040.1_Hmbox1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ACATGCTAGTAA-----
GAAAACTAGTTAACATC
C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

TEAD1/MA0090.3/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACATGCTAGTAA
CCACATTCCAGGC-
A C G T A C G T C G T A A G T C C G T A A C G T A C T G A G T C A C G T C G T A A C T G A C G T C G T A C G T A
G A T C G A T C C T G A T G A C C T G A A G C T C G A T G T A C G A T C C G T A C T A G T A C G T G A C A C G T