Information for 20-TGGCAGCTCATG (Motif 20)

A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G C G T A A C T G A G T C A C G T A C T G A G T C A G T C C G T A
p-value:1e-4
log p-value:-1.075e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets159.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0170.1_Tgif2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGCTCATG
GTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

PH0102.1_Meis1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGCTCATG
NTATTGACAGCTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0105.1_Meis3/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGCTCATG
GTATTGACAGGTNNTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGGCAGCTCATG
TGCCAGCB----
A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGCTCATG
NTATTGACAGGTNNTN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGGCAGCTCATG
GATATTGACAGCTGCGT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

PH0140.1_Pknox1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGCTCATG
GGATTGACAGGTCNTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGCAGCTCATG--
NNNNAGCAGCTGCTGAN
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

PH0141.1_Pknox2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGGCAGCTCATG
NNATTGACAGGTGCTT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGGCAGCTCATG
CTTGGCAA------
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C T G A G T C A C G T A G T C C G T A A C G T A C T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T