Information for 2-YYTSTCYMTTRG (Motif 2)

A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
Reverse Opposite:
G A T C G A C T G T C A C G T A A C T G C T A G T A C G C T G A A T C G C T G A C T G A C T A G
p-value:1e-5
log p-value:-1.205e+01
Information Content per bp:1.653
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2310.7
Percentage of Background Sequences with motif3.05%
Average Position of motif in Targets98.2 +/- 57.4bp
Average Position of motif in Background102.6 +/- 74.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YYTSTCYMTTRG
-CTGTTCCTGG-
A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----YYTSTCYMTTRG
ANTCCTTTGTCTNNNN-
A C G T A C G T A C G T A C G T A C G T A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YYTSTCYMTTRG
CCTTTGTTTT----
A C G T A C G T A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---YYTSTCYMTTRG
TTCTTTCTCTT----
A C G T A C G T A C G T A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--YYTSTCYMTTRG
YCTTTGTTCC----
A C G T A C G T A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:YYTSTCYMTTRG-
--TGTGGATTNNN
A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PRDM4/MA1647.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-YYTSTCYMTTRG
GTCTGTTTCTA--
A C G T A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----YYTSTCYMTTRG
NNNNTTTGTTTACNNT
A C G T A C G T A C G T A C G T A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

SOX4/MA0867.2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---YYTSTCYMTTRG
NCCTTTGTTC-----
A C G T A C G T A C G T A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
A G T C A G T C G A T C C G A T A G C T A G C T T A C G C G A T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YYTSTCYMTTRG
-TTGTTTAC---
A G T C A G C T A G C T A T G C A G C T A G T C G A T C T G A C C G A T C A G T C T G A C T A G
A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T