Information for 25-CACACAGGCC (Motif 43)

A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-1
log p-value:-4.386e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets87.1 +/- 23.6bp
Average Position of motif in Background115.3 +/- 48.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----CACACAGGCC-
AGCGGCACACACGCAA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CACACAGGCC
--CACAGN--
A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:CACACAGGCC--------
----CAGGCCNNGGCCNN
A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CACACAGGCC---
-----AGGCCTNG
A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:CACACAGGCC-
---CTAGGCCT
A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

HES6/MA1493.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACACAGGCC
AACACGTGCC
A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C
C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACACAGGCC---
-ACAAAGGNBCCT
A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

MXI1/MA1108.2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CACACAGGCC
GACACATGGC
A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

SOX10/MA0442.2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CACACAGGCC
AAAACAAAGAA-
A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CACACAGGCC
AAAACAAAGG--
A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G A C T G A G T C A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T