Information for 20-CTTAGTTTATCC (Motif 22)

A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C G T C G T A C G T A C G T A A G T C A C G T C G T A C G T A A C T G
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets90.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0123.1_Obox3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTAGTTTATCC------
-ATAGTTAATCCCCCNNA
A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

PH0125.1_Obox5_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTTAGTTTATCC-----
GATAATTAATCCCTCTT
A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

DPRX/MA1480.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CTTAGTTTATCC-
---AGATAATCCC
A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T
A C G T A C G T A C G T T C G A T A C G G T C A A C G T T G C A C G T A A C G T G T A C A G T C A T G C

PH0122.1_Obox2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTTAGTTTATCC------
-ATAGTTAATCCCCCTCA
A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTAGTTTATCC------
-NTTGTTAATCCCTCTNN
A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTAGTTTATCC------
-NTAGTTAATCCCCTTAN
A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGTTTATCC---
NNNTTTGTTTACNTTNN
A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTTAGTTTATCC---
NNNTTTGTTTACNTTNN
A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTTAGTTTATCC-
NNNNTTTGTTTACNNT
A C G T A C G T A C G T A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C A C G T
G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTTAGTTTATCC
--TTGTTTAC--
A G T C A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C G T A G T C A G T C
A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T