Information for 9-GTGGTCACAAAG (Motif 9)

A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T A C G T A C T G A C G T A C T G C G T A A G T C A G T C C G T A A G T C
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets10.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTGGTCACAAAG--
---AAAACAAAGAA
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTCACAAAG
CYWSTGGTCARA---
A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTGGTCACAAAG-
---VRRACAAWGG
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:reverse strand
Alignment:------GTGGTCACAAAG
NNANTGGTGGTCTTNNN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTCACAAAG-------
NNTNGNNGTAACCAAGNNNNAGN
A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTGGTCACAAAG-
ARGAGGMCAAAATGW
A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGTCACAAAG
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCACAAAG
AGRGGTCA-----
A C G T A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:9
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GTGGTCACAAAG--
----GAACAAAGGG
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTGGTCACAAAG------
------ACAAAGGNBCCT
A C T G A C G T A C T G A C T G A C G T A G T C C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T