Information for 3-GGKTTATATG (Motif 6)

C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G
Reverse Opposite:
G A T C G C T A G C A T G T C A G A C T G T C A G T C A G T C A T A G C G T A C
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.596
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.14%
Number of Background Sequences with motif972.5
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets99.0 +/- 54.4bp
Average Position of motif in Background99.6 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGKTTATATG-
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GGKTTATATG-
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGKTTATATG
NGGGATTA----
A C G T A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGKTTATATG
AAGGGATTAGAA-
A C G T A C G T A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T

PITX1/MA0682.2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGKTTATATG
NGGATTAN---
A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G
C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GGKTTATATG--
NANAGGGATTAATTATN
A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PITX2/MA1547.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGKTTATATG
GGGATTAN---
A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G
A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T A C G T A C G T A C G T

DPRX/MA1480.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGKTTATATG
NGGATTATCT-
A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G
T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----GGKTTATATG--
TAGAGGGATTAAATTTC
A C G T A C G T A C G T A C G T A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGKTTATATG
GGGATTANN--
A C G T C A T G A T C G C A G T A C G T A C G T C T G A C A G T C G T A C G A T C T A G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T