Information for 11-GCAGCAGKCASA (Motif 13)

T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
Reverse Opposite:
A C G T T A G C C G A T A C T G G T C A A T G C C G A T C T A G A T G C C G A T A C T G A G T C
p-value:1e-10
log p-value:-2.454e+01
Information Content per bp:1.717
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.06%
Number of Background Sequences with motif147.9
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets125.6 +/- 37.1bp
Average Position of motif in Background96.3 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.48
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GCAGCAGKCASA
CACAGCAGGGG--
A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T

Zic2/MA1629.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCAGCAGKCASA
CTCACAGCAGGGGG-
A C G T A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCAGCAGKCASA
CCACACAGCAGGAGA-
A C G T A C G T A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCAGKCASA---
NNNCAGCTGTCAATATN
A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

ZNF317/MA1593.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCAGCAGKCASA
TAACAGCAGACT--
A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
C G A T T C G A C G T A T G A C C G T A C T A G G T A C C G T A C T A G G C T A G A T C G C A T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCAGKCASA
NNGCAGCTGTT---
A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCAGKCASA
TGACAGCTGTCA--
A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCAGCAGKCASA
GAGCACAGCAGGACA-
A C G T A C G T A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAGCAGKCASA
CCACACAGCAGGAGA-
A C G T A C G T A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

MYOD1/MA0499.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCAGCAGKCASA
CAGCACCTGTCCC-
A C G T A C G T T C A G G T A C C G T A A T C G G A T C C G T A T A C G A C G T A G T C G C T A A T C G G T C A
A T G C C G T A T A C G T A G C C T G A A T G C T A G C A G C T A T C G A G C T A G T C G T A C A G T C A C G T