Information for 9-TTCATGCACATC (Motif 12)

A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
Reverse Opposite:
C T A G T C G A A C G T A C T G G C A T A C T G A G T C G C T A A C G T T A C G G T C A T C G A
p-value:1e-3
log p-value:-8.825e+00
Information Content per bp:1.570
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif29.63%
Number of Background Sequences with motif2414.2
Percentage of Background Sequences with motif6.09%
Average Position of motif in Targets78.5 +/- 59.9bp
Average Position of motif in Background100.0 +/- 72.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1/MA1115.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTCATGCACATC
-ATATGCAAATT
A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTCATGCACATC
ACATTCATGACACG-
A C G T A C G T A C G T A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTCATGCACATC
-TTATGCAAAT-
A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTCATGCACATC
TTTAAT-------
A C G T A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCATGCACATC---
NAGATWNBNATCTNN
A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C A C G T A C G T A C G T
A T G C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T A C T G G A T C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCATGCACATC
TTTCATKGCC---
A C G T A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTCATGCACATC--
--TATGCWAATBAV
A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C A C G T A C G T
A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------TTCATGCACATC
GACCACATTCATACAAT--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTCATGCACATC
--TATGCAAATC
A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C
A C G T A C G T G A C T C G T A C A G T A C T G A G T C C G T A C G T A C G T A C A G T T G A C

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTCATGCACATC--
-ATATGCAAATNNN
A G C T A C G T A T G C T G C A C G A T C T A G T A G C C G T A T A G C G T C A A G C T G A T C A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A