Information for 7-TAWCCATGCG (Motif 13)

A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
Reverse Opposite:
A G T C C A T G G T A C C T G A C G A T A C T G A C T G C G T A A C G T C G T A
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.792
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets78.1 +/- 33.5bp
Average Position of motif in Background115.1 +/- 68.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0159.1_Rfx4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TAWCCATGCG-
NNNGTAACTANGNNA
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

PB0158.1_Rfx3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-8
Orientation:reverse strand
Alignment:--------TAWCCATGCG-----
NNTNGNNGTAACCAAGNNNNAGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TAWCCATGCG
AAGATATCCTT---
A C G T A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAWCCATGCG
GHATATKCAT---
A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TAWCCATGCG
GAATATTCAT---
A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

FOXD1/MA0031.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAWCCATGCG
GTAAACAT---
A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
A C T G A C G T G T C A C G T A T C G A G A T C C G T A C G A T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAWCCATGCG
GTAAACAA---
A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T

FOXA1/MA0148.4/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAWCCATGCG
ATGTAAACATGT-
A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
C G T A C G A T C T A G G A C T T G C A G T C A C G T A G A T C G C T A C G A T C A T G C G A T A C G T

Foxf1/MA1606.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TAWCCATGCG
ATGTAAACAAA--
A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G
C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TAWCCATGCG-
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T G T A C A G T C C G T A A G C T C A T G G A T C A C T G A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G