Information for 2-AAAAGGCT (Motif 10)

C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T
Reverse Opposite:
C G T A T A C G A G T C A G T C A C G T C G A T A C G T A C G T
p-value:1e-5
log p-value:-1.161e+01
Information Content per bp:1.911
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif2409.2
Percentage of Background Sequences with motif3.66%
Average Position of motif in Targets159.2 +/- 43.2bp
Average Position of motif in Background98.8 +/- 73.2bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL2/MA1105.2/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGCT--
AAAACAGGTTTT
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T A C G T A C G T
T G C A T C G A C T G A C T G A T A G C G C T A C T A G T A C G G A C T G A C T A G C T C A G T

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGCT
NNATAAGGNN
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.65
Offset:-8
Orientation:forward strand
Alignment:--------AAAAGGCT
TTCAAAWTAAAAGTC-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T
C A G T G A C T A G T C G C T A C T G A G T C A C G T A A G C T G T C A C T G A C T G A C T G A A C T G A G C T G A T C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------AAAAGGCT
GNCTATAAAAGG--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T

ZFP42/MA1651.1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AAAAGGCT-------
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

MAFF/MA0495.3/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGGCT-----
NNNAAAATGCTGACTN
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C A T T C A G G T A C G C A T C A T G G C T A A T G C G C A T G A C T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAAGGCT-
ANGNAAAGGTCA
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAAAGGCT-
----NGCTN
C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AAAAGGCT
ASATCAAAGG--
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T A C G T

NR4A1/MA1112.2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGCT---
TTAAAGGTCAAA
A C G T C G T A C G T A C G T A C G T A A C T G A C T G A T G C A C G T A C G T A C G T A C G T
C A G T G C A T C T G A C T G A T C G A C A T G C A T G A C G T A G T C C T G A T C G A C T G A