Information for 6-CCCCATTTTTGG (Motif 6)

A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C G T A C G T A C G T A A C G T A C T G A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets122.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.78
Offset:2
Orientation:forward strand
Alignment:CCCCATTTTTGG
--CCATATATGG
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G
A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCCCATTTTTGG
--CTATTTTTGG
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCCATTTTTGG-
-GCTATTTTTGGM
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCCCATTTTTGG--
--CCATATATGGNA
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCCCATTTTTGG-
-KCTATTTTTRGH
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PB0078.1_Srf_1/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCCATTTTTGG--
TTCCATATATGGAA
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCCATTTTTGG--
TGTTCCCATTGTGTACT
A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCCCATTTTTGG-
-GCTATTTTTAGC
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCCATTTTTGG---
TTCTATTTTTAGNNN
A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCCCATTTTTGG
GCNGCCATCTTG--
A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C T G A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T