Information for 7-GTCTTTAATAAG (Motif 12)

A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G T A A C G T A C G T C G T A C G T A C G T A A C T G C G T A A G T C
p-value:1e-3
log p-value:-9.082e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background163.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTCTTTAATAAG-
NNNTTTNTAATACNG
A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GTCTTTAATAAG
---TTTAAT---
A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T

PH0150.1_Pou4f3/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTCTTTAATAAG-
GACNTCATTAATAANN
A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A C G T
C T A G C T G A T G A C G A T C C A G T G T A C C G T A C G A T C G A T C G T A C T G A C G A T C G T A G T C A A G T C C G A T

LBX1/MA0618.1/Jaspar

Match Rank:4
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GTCTTTAATAAG
----TTAATTAG
A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GTCTTTAATAAG---
-TCTTTANTAATANN
A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A C G T A C G T A C G T
A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

ARGFX/MA1463.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTCTTTAATAAG-
---TTTAATTAGN
A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A C G T
A C G T A C G T A C G T C A G T G A C T G A C T C T G A C G T A A C G T C A G T C T G A C T A G G T C A

NKX6-1/MA0674.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GTCTTTAATAAG
----TTAATTAN
A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

POU6F2/MA0793.1/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:GTCTTTAATAAG--
----NTAATGAGCT
A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

PH0073.1_Hoxc9/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTCTTTAATAAG
GGAGGTCATTAATTAT
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G
T C A G C A T G T C G A C T A G T C A G G A C T G T A C C T G A G C A T G C A T C G T A G C T A G A C T G A C T C G T A A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTCTTTAATAAG-
---TTTTATTRGN
A C T G A C G T A G T C A C G T A C G T A C G T C G T A C G T A A C G T C G T A C G T A A C T G A C G T
A C G T A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C