Information for 6-YCATTTTTCG (Motif 10)

A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A G T C A C G T A G T C A C G T A G C A T A T C G C T A G
p-value:1e-13
log p-value:-3.012e+01
Information Content per bp:1.824
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets90.6 +/- 53.6bp
Average Position of motif in Background105.6 +/- 49.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0032.1_IRC900814_1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-YCATTTTTCG-----
GNNATTTGTCGTAANN
A C G T A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T

SOX14/MA1562.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:YCATTTTTCG-
-CATTGTTCGG
A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T
A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

SOX12/MA1561.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:YCATTTTTCG--
-NATTGTTCGGT
A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T
A C G T A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:YCATTTTTCG----
TTTTTTTTCNNGTN
A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

PB0075.1_Sp100_1/Jaspar

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:YCATTTTTCG------
--ATTTTCCGNNAAAT
A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

HOXC12/MA0906.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YCATTTTTCG---
--NTTTTACGACC
A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-YCATTTTTCG
NCCATTGTTC-
A C G T A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:YCATTTTTCG---
--NTTTTACGACT
A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

HOXD10/MA1506.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YCATTTTTCG---
--NTTTTACGACC
A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T A G C G A T C A G T A C G T G C A T G T C A A G T C A C T G T C G A A G T C A G T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---YCATTTTTCG
GKVTCADRTTWC-
A C G T A C G T A C G T A G T C A T G C C G T A A C G T A C G T A C G T A C G T A C G T A G T C A C T G
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T