Information for 14-CCYATCTCAGAC (Motif 21)

A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C
Reverse Opposite:
A C T G C G A T A G T C A C G T A C T G C T G A A C T G C T G A A C G T C T G A A C T G A C T G
p-value:1e-7
log p-value:-1.641e+01
Information Content per bp:1.905
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif15.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets95.8 +/- 50.2bp
Average Position of motif in Background110.7 +/- 79.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)2.86
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCYATCTCAGAC------
-CAAATCCAGACATCACA
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCYATCTCAGAC--
------CCAGACAG
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCYATCTCAGAC--
------BCAGACWA
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCYATCTCAGAC----
------CCAGACRSVB
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCYATCTCAGAC----
GCCTCCTCCMTCWGACTGKS
A C G T A C G T A C G T A C G T A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T A C G T A C G T
T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCYATCTCAGAC-
---ATGCCAGACN
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0098.1_Zfp410_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCYATCTCAGAC--
NNNTCCATCCCATAANN
A C G T A C G T A C G T A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

RUNX3/MA0684.2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCYATCTCAGAC
AAAACCTCAAAT
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCYATCTCAGAC--
NNCGCCTCAGGCNN
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T
T A G C A G T C T A G C A T C G A T G C A T G C A C G T A T G C T C G A T A C G A T C G T A G C G T A C T G A C

TFAP2A/MA0003.4/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCYATCTCAGAC--
ATTGCCTCAGGCCA
A G T C A G T C A G C T C G T A A G C T A G T C A G C T A G T C C G T A C T A G C G T A A G T C A C G T A C G T
T G C A A G C T C A G T A T C G T G A C A G T C A G C T T A G C T C G A T A C G A T C G T A G C G T A C T G C A