Information for 8-GAATTTGAGAGG (Motif 10)

A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A C G T A G T C C G T A C G T A C G T A A C G T A C G T A G T C
p-value:1e-3
log p-value:-8.611e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets108.0 +/- 0.0bp
Average Position of motif in Background124.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-2/MA1645.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GAATTTGAGAGG---
-NNNTTGAGTGGNNN
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GAATTTGAGAGG--
---CTTGAGTGGCT
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GAATTTGAGAGG--
----TTGAGTGSTT
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAATTTGAGAGG-
---BTBRAGTGSN
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAATTTGAGAGG-
--NNTTGAGTGNN
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T
A C G T A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GAATTTGAGAGG
----TTGACAGC
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAATTTGAGAGG-----
-NNATTGACAGGTGCTT
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAATTTGAGAGG----
AAATTCAAGTGGNTTN
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAATTTGAGAGG-
---CTYRAGTGSY
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PH0104.1_Meis2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAATTTGAGAGG-----
-NTATTGACAGGTNNTN
A C T G C G T A C G T A A C G T A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T