Information for 21-GTCCATATTC (Motif 30)

A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T C G T A A C G T A C T G A C T G C G T A A G T C
p-value:1e-2
log p-value:-6.639e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif140.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets167.0 +/- 0.0bp
Average Position of motif in Background103.4 +/- 153.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GTCCATATTC-------
GACCACATTCATACAAT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTCCATATTC
ATGMATATDC
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCCATATTC
ATGAATATTC
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GTCCATATTC
GCNGCCATCTTG
A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCCATATTC
RRTCAATA---
A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTCCATATTC
--CCATATGT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

OLIG3/MA0827.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTCCATATTC-
-ACCATATGTT
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C A C G T
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCCATATTC-
NNTNNCAATATTAG
A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTCCATATTC-
NNTNNCAATATTAG
A C G T A C G T A C G T A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

TEAD2/MA1121.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCCATATTC-----
--TCACATTCCAGCC
A C T G A C G T A G T C A G T C C G T A A C G T C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C