| p-value: | 1e-3 |
| log p-value: | -8.542e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 2.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 109.0 +/- 0.0bp |
| Average Position of motif in Background | 180.9 +/- 3.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0078.1_Hoxd13/Jaspar
| Match Rank: | 1 |
| Score: | 0.68 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGGTTTTATAAA--- NNANTTTTATTGGNNN |
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POL012.1_TATA-Box/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GGGTTTTATAAA NNNNNNCTTTTATAN- |
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TBP/MA0108.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GGGTTTTATAAA NNNNNNCTTTTATAN- |
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PB0187.1_Tcf7_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGTTTTATAAA--- CCGTATTATAAACAA |
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Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGGTTTTATAAA --NTTTTATDRG |
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PB0001.1_Arid3a_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGGTTTTATAAA----- GGGTTTAATTAAAATTC |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GGGTTTTATAAA- -DGWTTTATGRCN |
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PB0080.1_Tbp_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGGTTTTATAAA---- NANTTATATATAANGN |
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Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGGTTTTATAAA- ---TTTTATTRGN |
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Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGGTTTTATAAA --NTTTTATGAC |
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