Information for 15-KAAAWGYKGGAC (Motif 19)

C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C
Reverse Opposite:
T C A G A C G T G T A C A G T C G T A C C T A G A T G C G C A T G A C T C A G T A G C T G T C A
p-value:1e-3
log p-value:-8.742e+00
Information Content per bp:1.651
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif40.00%
Number of Background Sequences with motif2607.0
Percentage of Background Sequences with motif3.07%
Average Position of motif in Targets112.5 +/- 46.7bp
Average Position of motif in Background99.9 +/- 74.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Prdm15/MA1616.1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--KAAAWGYKGGAC-
AGGAAAACCTGGAGC
A C G T A C G T C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T
C T G A C T A G A C T G T C G A T C G A C T G A C T G A A G T C T G A C G A C T C T A G C T A G T G C A T C A G G A T C

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:KAAAWGYKGGAC----
-AAAACCTGGANHGGR
C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T A C G T A C G T A C G T
A C G T C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

RORC/MA1151.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KAAAWGYKGGAC-
-ATAAGTAGGTCA
C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T
A C G T C T G A C G A T G C T A C G T A A C T G A C G T T C G A C A T G C T A G A C G T A G T C C T G A

RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:KAAAWGYKGGAC-----
--AAWCTAGGTCARDNN
C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G A C T G A G C T A G T C C G T A C T A G C T A G C T A G T G C A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KAAAWGYKGGAC--
TATAAGTAGGTCAA
C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:KAAAWGYKGGAC--
--WAABTAGGTCAV
C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T A C G T
A C G T A C G T C G T A C G T A C G T A A G T C A G C T C T G A A C T G C T A G A G C T A G T C C G T A T C A G

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-KAAAWGYKGGAC
TGGAATGYRG---
A C G T C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C
G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T T C A G A C T G A C G T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:KAAAWGYKGGAC-
---AAYTAGGTCA
C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:KAAAWGYKGGAC-
---AAYTAGGTCA
C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T
A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--KAAAWGYKGGAC-
TAYAAAAGBWGGCAG
A C G T A C G T C A G T T C G A G C T A C T G A C G T A A T C G G A T C C A T G T C A G C A T G T C G A A G T C A C G T
G A C T C G T A G A T C C G T A C G T A C T G A C G T A A C T G A C T G G C A T C A T G C T A G A G T C C T G A T C A G