Information for 9-GCCCTACAGG (Motif 28)

A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C G T C G T A A C T G A C T G A C T G A G T C
p-value:1e-3
log p-value:-6.978e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 0.0bp
Average Position of motif in Background117.2 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTACAGG--
TGCCCTNAGGGCA
A C G T A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTACAGG--
TGCCCTNAGGGCA
A C G T A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCCTACAGG--
TGCCCTGAGGGCA
A C G T A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

ZNF449/MA1656.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GCCCTACAGG
CCAAGCCCAACCAG
A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCTACAGG-----
DCHCAGCAGGRGGCC
A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SCRT2/MA0744.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCTACAGG-----
AAAGCAACAGGTGGTT
A C G T A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A A C T G G A T C G T C A C T G A T A G C G C T A C T A G C A T G G A C T C A T G C A T G G A C T G C A T

SCRT1/MA0743.2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCCTACAGG-----
AATTCAACAGGTGGTT
A C G T A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C G T A C T G A C G A T A C G T G A T C G T C A C T G A A T G C G C T A C T A G C T A G G A C T C A T G C A T G A G C T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCCCTACAGG
----CACAGN
A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCCTACAGG--
--GCAACAGGTG
A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GCCCTACAGG
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T C G T A A G T C C G T A A C T G A C T G
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G