Information for 6-CTTGCTAGAT (Motif 11)

A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C A C G T C G T A A C T G A G T C C T G A C G T A A C T G
p-value:1e-10
log p-value:-2.335e+01
Information Content per bp:1.923
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif36.4
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets100.1 +/- 38.2bp
Average Position of motif in Background112.4 +/- 53.3bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTTGCTAGAT
ATTCTCGCGAGA-
A C G T A C G T A C G T A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CTTGCTAGAT--
GTTCTCGCGAGANCC
A C G T A C G T A C G T A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CTTGCTAGAT
NAGNTCTCGCGAGAN
A C G T A C G T A C G T A C G T A C G T A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

DMRTC2/MA1479.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTTGCTAGAT-
AATTGATACATT
A C G T A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTTGCTAGAT---
CTAAGGTTCTAGATCAC
A C G T A C G T A C G T A C G T A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTGCTAGAT-
NTTGATACATT
A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTTGCTAGAT--
TTTGATTGATGN
A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Smad4/MA1153.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTTGCTAGAT-
---TCTAGACA
A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTTGCTAGAT-
-ATGCCAGACN
A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTTGCTAGAT--
--TGATKGATGR
A G T C G C A T A G C T A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G