Information for 12-AAAGGATTTAGG (Motif 16)

C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T A C G T
p-value:1e-3
log p-value:-9.049e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background149.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAGGATTTAGG---
AAATGATTTATGGCT
C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

PBX2/MA1113.2/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAAGGATTTAGG--
-NNTGATTTATGNN
C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T
A C G T C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAGGATTTAGG
-VRGGATTARN-
C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAAGGATTTAGG
-AAGGATATNTN
C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Dmbx1/MA0883.1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAGGATTTAGG--
TGAACCGGATTAATGAA
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAAGGATTTAGG--
TGAACCGGATTAATGAA
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0035.1_Gsc/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAGGATTTAGG---
NNAAGGGATTAACGANT
A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T

PH0138.1_Pitx2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAAGGATTTAGG---
TGAAGGGATTAATCATC
A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAGGATTTAGG
ACAGGATGTGGT
C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G
T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

PH0126.1_Obox6/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAGGATTTAGG
AAAAACGGATTATTG
A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G A C T G
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G