Information for 1-GTCTCTGTCT (Motif 2)

C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T
Reverse Opposite:
T G C A C T A G C T G A A T G C C G T A C T A G C T G A A C T G C T G A G T A C
p-value:1e-19
log p-value:-4.385e+01
Information Content per bp:1.853
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif334.4
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets119.4 +/- 51.7bp
Average Position of motif in Background105.5 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTGTCT----
ANTCCTTTGTCTNNNN
A C G T A C G T C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTCTCTGTCT
VCCTCTCTGDDY
A C G T A C G T C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T
T G A C T A G C G T A C G C A T A G T C A C G T A T G C C G A T T A C G C G A T C A G T A G T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GTCTCTGTCT--
----CTGTCTGG
C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GTCTCTGTCT-
NNCTTTGTTNN
C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T
A C G T A G C T T G A C C G A T C G A T C G A T T C A G C G A T A C G T G A C T G A C T

Stat2/MA1623.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCTGTCT--
NNTTTCTGTTTCT
A C G T C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T A C G T
C G T A A T C G A G C T G A C T A G C T G A T C C G A T A T C G A G C T C G A T G A C T G A T C G A C T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTCTCTGTCT-
-CCTTTGTTTT
C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GTCTCTGTCT--
--VBSYGTCTGG
C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PRDM1/MA0508.3/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCTCTGTCT-
TTCTTTCTCTT
C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTCTCTGTCT-
ACCACTCTCGGTCAC
A C G T A C G T A C G T A C G T C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTCTCTGTCT-
-CCWTTGTYYB
C A T G G A C T A G T C A G C T A G T C A C G T A T C G A G C T A G T C A C G T A C G T
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G