Information for 3-CAKTATAT (Motif 10)

G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T
Reverse Opposite:
C G T A C G A T C G T A A C G T C T G A G T C A C A G T C T A G
p-value:1e-4
log p-value:-1.011e+01
Information Content per bp:1.648
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif4954.1
Percentage of Background Sequences with motif7.91%
Average Position of motif in Targets137.1 +/- 31.9bp
Average Position of motif in Background99.7 +/- 87.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAKTATAT-------
TCTTTATATATAAATA
A C G T G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CAKTATAT---
AAGGATATNTN
G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAKTATAT--
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CAKTATAT--
NNNNNNCTTTTATAN
A C G T A C G T A C G T A C G T A C G T G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAKTATAT-------
-CTAATATTGCTAAA
G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAKTATAT-------
-CTAATATTGCTAAA
G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

BHLHE22/MA0818.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAKTATAT---
-ANCATATGGT
G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T A C G T
A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T

GATA4/MA0482.2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CAKTATAT--
TTCCTTATCTTT
A C G T A C G T G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T

SRF/MA0083.3/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CAKTATAT-----
TGNCCATATATGGTCA
A C G T A C G T A C G T G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAKTATAT-------
ANNNGGATATATCCNNN
A C G T A C G T G A T C G T C A C A G T G A C T T G C A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T