Information for 8-TTCGTCTCTC (Motif 19)

A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G T A A C T G C G T A A G T C A C T G C G T A C G T A
p-value:1e-3
log p-value:-8.428e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background98.6 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TTCGTCTCTC
ACTTTCGTTTCT-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T A C G T

SPI1/MA0080.5/Jaspar

Match Rank:2
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------TTCGTCTCTC--
NNTTTCACTTCCTCTTTTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T
G C A T G A C T G A C T G A C T A G C T A T G C G C T A A G T C G C A T A G C T G A T C G A T C G A C T A G T C G C A T G A C T G A C T G A C T G A C T G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TTCGTCTCTC----
--TGTCTGDCACCT
A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0021.1_Gata3_1/Jaspar

Match Rank:4
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------TTCGTCTCTC------
NNTNANTTCTTATCTCTANANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TTCGTCTCTC
CACTTCCYCTTT-
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C
T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCGTCTCTC------
-ACCACTCTCGGTCAC
A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

PB0108.1_Atf1_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCGTCTCTC
NTTATTCGTCATNC
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C

PB0033.1_Irf3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TTCGTCTCTC
CAGTTTCGNTTCTN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

SPIB/MA0081.2/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TTCGTCTCTC
TTTCACTTCCTCTTTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C
G A C T G A C T A G C T A T G C C G T A A T G C G C A T A C G T G A T C G A T C A G C T A G T C G C A T G A C T G A C T A G C T

GATA6/MA1104.2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTCGTCTCTC-
TTATCTTATCTTT
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A G T C A C G T A G T C A C G T
G C A T G C A T G C T A A G C T A T G C G C A T G C A T C G T A G C A T G A T C G C A T G A C T G C A T