Information for 5-GTCACAAGAGTC (Motif 5)

A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C
Reverse Opposite:
A C T G C G T A A T G C A C G T G T A C A C G T A C G T A C T G A C G T A C T G C G T A A G T C
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.932
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif18.75%
Number of Background Sequences with motif42.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets105.0 +/- 54.4bp
Average Position of motif in Background97.7 +/- 82.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GTCACAAGAGTC
GTCACATGAY--
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T

USF2/MA0526.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTCACAAGAGTC
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

USF1/MA0093.3/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTCACAAGAGTC
NNGTCACATGACNN
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTCACAAGAGTC-----
NTNNNAGGAGTCTCNTN
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C A C G T A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GTCACAAGAGTC
GTCACGTGACYV
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C
T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

MITF/MA0620.3/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCACAAGAGTC--
TAAAGTCACGTGACTTTA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C A C G T A C G T
G C A T C G T A C G T A C T G A T C A G A G C T T A G C G C T A A G T C T C A G C G A T A T C G T C G A A G T C G A C T G C A T G C A T C G T A

TFE3/MA0831.2/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTCACAAGAGTC
GTCACGTG----
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C
T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCACAAGAGTC
CCGGTCACGTGA---
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C
A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCACAAGAGTC-
ATGTCACAACAACAC
A C G T A C G T A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PKNOX2/MA0783.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCACAAGAGTC-
-TGACAGGTGTCA
A C T G A C G T A G T C C G T A A G T C C G T A C G T A A C T G T G C A A T C G A C G T G T A C A C G T
A C G T C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A