Information for 2-CAACACGTGC (Motif 6)

A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C A C T G A C G T A C T G A C G T A C G T A C T G
p-value:1e-4
log p-value:-9.871e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets84.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HES6/MA1493.1/Jaspar

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CAACACGTGC-
-AACACGTGCC
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T C T G A C G T A A G T C T G C A A T G C T C A G G C A T A T C G A T G C T G A C

CLOCK/MA0819.1/Jaspar

Match Rank:2
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CAACACGTGC-
-AACACGTGTT
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

Mlxip/MA0622.1/Jaspar

Match Rank:3
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:CAACACGTGC
--ACACGTGC
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Npas2/MA0626.1/Jaspar

Match Rank:4
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:CAACACGTGC-
-NACACGTGCN
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

MNT/MA0825.1/Jaspar

Match Rank:5
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CAACACGTGC-
-ACCACGTGCC
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

MAX/MA0058.3/Jaspar

Match Rank:6
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CAACACGTGC-
-ACCACGTGCT
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C A C G T
A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:7
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CAACACGTGC
-ACCACGTG-
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C
A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CAACACGTGC
DGCACACGTG-
A C G T A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C
C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CAACACGTGC
-NVCACGTG-
A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CAACACGTGC
GCAACAGGTG-
A C G T A G T C C G T A C G T A A G T C C G T A A G T C A C T G A C G T A C T G A G T C
A C T G A G T C G T C A C G T A A G T C C G T A C T A G C T A G G A C T C A T G A C G T