Information for 21-CACTGCATGCTG (Motif 31)

A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.529e+00
Information Content per bp:1.932
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets98.5 +/- 48.3bp
Average Position of motif in Background97.6 +/- 72.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CACTGCATGCTG
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CACTGCATGCTG
GAGCACAGCAGGACA
A C G T A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACTGCATGCTG
DCTCAGCAGG---
A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACTGCATGCTG
CCACACAGCAGGAGA
A C G T A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CACTGCATGCTG
CCACACAGCAGGAGA
A C G T A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic2/MA1629.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACTGCATGCTG
CTCACAGCAGGGGG
A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
T G A C C A G T T G A C G C T A T A G C G T C A T A C G A G T C C T G A C A T G A T C G C T A G T C A G T C A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CACTGCATGCTG--
CCATTGTATGCAAAT
A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CACTGCATGCTG
CACAGCAGGGGG
A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ELF1/MA0473.3/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACTGCATGCTG
NNCACTTCCTGNNN
A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
A T G C A G T C A G T C G C T A A G T C G C A T A C G T G A T C T A G C A C G T A T C G A C G T G A C T G A C T

ELF3/MA0640.2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CACTGCATGCTG
TTCCACTTCCTGGT-
A C G T A C G T A C G T A G T C C G T A A G T C C G A T A C T G A G T C C G T A A C G T A C T G A G T C C G A T C T A G
G A C T A G C T A G T C G A T C C G T A A G T C G A C T A C G T G A T C A G T C A C G T A T C G A T C G G C A T A C G T