Information for 10-CGTGGATGAT (Motif 29)

A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A C G T A G T C A G T C C G T A A G T C A C T G
p-value:1e-3
log p-value:-8.923e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets97.0 +/- 0.0bp
Average Position of motif in Background172.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGTGGATGAT
-GTGGAT---
A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

DPRX/MA1480.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGTGGATGAT--
--NGGATTATCT
A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T

RHOXF1/MA0719.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGTGGATGAT
--NGGATTAN
A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGTGGATGAT--
CGTGGGTGGTCC
A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

GLI2/MA0734.2/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGATGAT--
CGNCGTGGGTGGTCN
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T

GLI3/MA1491.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGATGAT--
CGNCGTGGGTGGTCN
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T A C G T A C G T
T A G C C T A G G C T A A T G C C A T G A G C T C A T G C A T G A T C G C A G T A C T G A C T G A C G T T G A C A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGTGGATGAT
TGCGTGGGYG--
A C G T A C G T A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGTGGATGAT-
TTGCCCGGATTAGG
A C G T A C G T A C G T A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T A C G T
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G

PITX2/MA1547.1/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTGGATGAT
--GGGATTAN
A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T
A C G T A C G T A C T G T C A G C T A G G T C A A C G T A G C T C G T A C A G T

PITX1/MA0682.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGTGGATGAT
--NGGATTAN
A G T C A C T G A C G T A C T G A C T G C G T A A C G T A C T G C G T A A C G T
A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G