Information for 4-CTTAACCC (Motif 15)

A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T C G T A C G T A A C T G
p-value:1e-3
log p-value:-8.765e+00
Information Content per bp:1.957
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif629.8
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets116.0 +/- 38.8bp
Average Position of motif in Background101.2 +/- 76.6bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:CTTAACCC--------
-TTAACCCTTTVNKKN
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A C T C G T A G C T A G T A C G A T C G T A C G A C T A G C T A C G T T G A C C G T A C A G T A C G T A T G C

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTTAACCC-
CTTAATCCC
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CTTAACCC--
NYTAATCCYB
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

ZNF652/MA1657.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CTTAACCC----
NTTAACTCTTTN
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T A C G T A C G T A C G T
C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C

PITX1/MA0682.2/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTTAACCC-
-CTAATCCC
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T
A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CTTAACCC--
--TAATCCCN
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T A C G T
A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTAACCC------
NNNATTAATCCGNTTNA
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTAACCC------
NNNATTAATCCGNTTNA
A C G T A C G T A C G T A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

OTX1/MA0711.1/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CTTAACCC-
-TTAATCCG
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C A C G T
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTTAACCC
GCTAATCC
A G T C A C G T A C G T C G T A C G T A G T A C A G T C A G T C
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C