Information for 5-GCAGGAATAATA (Motif 7)

A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T C G T A A C G T A C G T A G T C A G T C A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.082e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets134.1 +/- 18.4bp
Average Position of motif in Background28.8 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GCAGGAATAATA
-----AATAATT
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCAGGAATAATA---
TGAAGGGATTAATCATC
A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGGAATAATA----
TTAAGAACAATAAATT
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGAATAATA
CCWGGAATGY--
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGAATAATA----
TTTAGAACAATAAAAT
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCAGGAATAATA
NCTGGAATGC--
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCAGGAATAATA
--ATGAATATTC
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCAGGAATAATA
CWGGCGGGAA-----
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGGAATAATA
ACAGGAAGTG--
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCAGGAATAATA
ACAGGAAGTG--
A C T G A G T C C G T A A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T C G T A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T