Information for 23-GGCCTGCAGGGT (Motif 19)

A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A G T C A G T C
p-value:1e-3
log p-value:-8.823e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background160.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGCAGGGT--
TNTCCTGCTGTGNNG
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCCTGCAGGGT
NNCCTGCTGNG-
A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGCAGGGT--
TCNCCTGCTGNGNNN
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GGCCTGCAGGGT
--CCTGCTGAGH
A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGCCTGCAGGGT
GGCCYCCTGCTGDGH
A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGCAGGGT--
NNTCCTGCTGTGNNN
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGCAGGGT
CCYCCYGCTGDG-
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G A C G T

Zic2/MA1629.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGCAGGGT-
CCCCCTGCTGTGNN
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T A C G T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTGCAGGGT
CCCCCTGCTGTG-
A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------GGCCTGCAGGGT
GGGGCCGAGGCCTG------
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C A C G T A C T G A G T C C G T A A C T G A C T G A C T G A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T