Information for 10-CAATATTCTC (Motif 26)

A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C
Reverse Opposite:
A C T G C G T A A C T G C T G A G T C A A C G T C G T A A C G T C G A T A C T G
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.879
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif225.9
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets112.9 +/- 60.5bp
Average Position of motif in Background106.3 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CAATATTCTC
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CAATATTCTC
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CAATATTCTC
GAATATTCAT
A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAATATTCTC
RRTCAATA-----
A C G T A C G T A C G T A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAATATTCTC------
-AGTATTCTCGGTTGC
A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAATATTCTC---
--ATATTTACATA
A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAATATTCTC------
-NNAATTCTCGNTNAN
A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAATATTCTC---
--ATATTTACATA
A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C A C G T A C G T A C G T
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAATATTCTC
AAGATATCCTT
A C G T A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0063.1_Sox13_1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CAATATTCTC
TTAAGAACAATAAATT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C T A C G T A A C G T C G T A A C G T A G C T A G T C C G A T A G T C
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T A C G T