Information for 6-TGTGGTCAKTAC (Motif 6)

C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C
Reverse Opposite:
C A T G C A G T G C T A T G A C A C G T C A T G G T C A A G T C G T A C C G T A G A T C C G T A
p-value:1e-12
log p-value:-2.803e+01
Information Content per bp:1.629
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.4 +/- 51.0bp
Average Position of motif in Background105.6 +/- 67.7bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0053.1_Hoxa6/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTCAKTAC---
NTNAGGTAATTACCTT
A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C A C G T A C G T A C G T
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T

PH0049.1_Hoxa2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTCAKTAC---
NTGAGCTAATTACCNT
A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C A C G T A C G T A C G T
G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T

PH0060.1_Hoxb5/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTCAKTAC---
ATGNGCTAATTANCNT
A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C A C G T A C G T A C G T
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PH0081.1_Pdx1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTCAKTAC---
NTGNGCTAATTACCNN
A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C A C G T A C G T A C G T
G T C A G A C T A T C G C G T A C T A G A T G C G A C T T G C A G C T A C A G T A C G T C T G A T A G C G A T C A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTCAKTAC---
CTGAGGTAATTACCNC
A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C A C G T A C G T A C G T
G A T C C G A T T C A G C T G A C A T G T A C G G A C T T G C A G C T A C A G T A C G T C T G A G T A C G T A C A C G T A G T C

PH0079.1_Hoxd3/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGTGGTCAKTAC---
TTGAGTTAATTAACCT
A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

HOXA4/MA1496.1/Jaspar

Match Rank:7
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGTGGTCAKTAC
----GTCATTAG
C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C
A C G T A C G T A C G T A C G T T C A G A G C T T G A C C T G A A C G T A G C T T C G A T C A G

HOXB4/MA1499.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGTGGTCAKTAC
----ATCATTAG
C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C
A C G T A C G T A C G T A C G T T C G A A G C T G T A C C T G A A C G T A C G T C T G A T C A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTCAKTAC
NNHTGTGGTTWN---
A C G T A C G T A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

PH0052.1_Hoxa5/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTCAKTAC---
NTGAGCTAATTACCNT
A C G T C G A T C T A G G A C T C A T G C T A G A C G T G A T C C G T A A C T G C G A T G T C A G T A C A C G T A C G T A C G T
G A T C G C A T C A T G C G T A C T A G A T G C G A C T G T C A G T C A A C G T A C G T C T G A T G A C G A T C A C T G A G C T