Information for 19-CAATATTAGC (Motif 36)

A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A C G T A A C G T C G T A A C G T A C G T A C T G
p-value:1e-3
log p-value:-7.019e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif55.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets164.0 +/- 0.0bp
Average Position of motif in Background116.3 +/- 96.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----CAATATTAGC
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.84
Offset:-5
Orientation:reverse strand
Alignment:-----CAATATTAGC
NNTNNCAATATTAG-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T

GATA1/MA0035.4/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAATATTAGC-
NNAGATTAGAN
A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C A C G T
C G T A G C A T C G T A C A T G C G T A C G A T G C A T G C T A C A T G C G T A G C T A

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAATATTAGC
KCCAAAAATAGC
A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAATATTAGC
RRTCAATA-----
A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAATATTAGC
DCYAAAAATAGM
A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAATATTAGC
GCTAAAAATAGC
A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAATATTAGC
AAATCACTGC
A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C
T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

MEF2C/MA0497.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CAATATTAGC-
ATGCTAAAAATAGAA
A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

DPRX/MA1480.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAATATTAGC-
-NGGATTATCT
A G T C C G T A C G T A A C G T C G T A A C G T A C G T C G T A A C T G A G T C A C G T
A C G T T A C G T C A G C A T G G T C A A C G T A C G T C G T A C A G T A T G C A G C T