Information for 19-AAAAGGAGCTTC (Motif 22)

C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C T G A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.926e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background124.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:forward strand
Alignment:AAAAGGAGCTTC-
-------GCTTCC
C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAAAGGAGCTTC
GGAGAAAGGTGCGA-
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AAAAGGAGCTTC
---CGGAGC---
C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGAGCTTC-
AAACATAATGAGGTTGC
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T
T C G A G T C A G C T A T A G C G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G T A C G G C A T C A G T A C T G G T A C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGAGCTTC-
ADGGYAGYAGCATCT
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGAGCTTC
NNATAAGGNN----
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAAAGGAGCTTC----
CAAAAAGGGGCGTGGCAT
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGAGCTTC
TTAAGAGGAAGTTA
A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C

ZNF682/MA1599.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAAAGGAGCTTC-----
-NNAGGGGCTTGGCCNN
C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A G C T G C T A C A T G A T C G T C A G C T A G T A G C A C G T A C G T T C A G A T C G A G T C G A T C A G T C T C A G

PH0151.1_Pou6f1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AAAAGGAGCTTC-
GACGATAATGAGCTTGC
A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C G T A G T C A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C