Information for 20-CCCATGCAGGTA (Motif 17)

A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C T G A C T G
p-value:1e-4
log p-value:-1.079e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM1/MA0646.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CCCATGCAGGTA-
--CATGCGGGTAC
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T
A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

GCM2/MA0767.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCCATGCAGGTA
--TATGCGGGTA
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCATGCAGGTA---
NNNNATGCGGGTNNNN
A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.64
Offset:5
Orientation:forward strand
Alignment:CCCATGCAGGTA---
-----VCAGGTRDRY
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

TCF3/MA0522.3/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCATGCAGGTA--
---NNGCAGGTGNN
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T A C G A T C G T C A G A G T C T C G A A T C G T A C G A G C T T A C G A T G C A T C G

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCCATGCAGGTA--
---NNGCAGGTGNN
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T T A G C T C A G T C A G A G T C T C G A A T C G T A C G A G C T T C A G A T G C A T C G

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCCATGCAGGTA--
----GGCAGGTGCA
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCCATGCAGGTA--
----RGCAGGTGYA
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C A G T A G C C G T A T A C G T A C G A G C T C A T G A G C T T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCATGCAGGTA-
--AAGGCAAGTGT
A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCATGCAGGTA--
GACCACATTCATACAAT
A C G T A C G T A C G T A G T C A G T C A G T C C G T A A C G T A C T G A G T C C G T A A C T G A C T G A C G T C G T A A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T