Information for 6-ATGAGCACTCAC (Motif 11)

C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A G T C C G T A A C G T
p-value:1e-3
log p-value:-8.933e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:forward strand
Alignment:ATGAGCACTCAC
--GTACACTCAC
C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C
A C G T A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

ZNF274/MA1592.1/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-ATGAGCACTCAC---
NNCGAGAACTCATACN
A C G T C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T
G T C A T C A G G A T C C T A G C G T A C A T G C T G A G T C A A T G C G A C T A G T C T G C A G A C T T C G A A G T C G A T C

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---ATGAGCACTCAC--
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:ATGAGCACTCAC
--AAGCACTTAA
C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C
A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PB0026.1_Gm397_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATGAGCACTCAC--
CAGATGTGCACATACGT
A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ATGAGCACTCAC--
TACATGTGCACATAAAA
A C G T A C G T A C G T C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATGAGCACTCAC-
--AGCCACTCAAG
C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

NKX2-5/MA0063.2/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:forward strand
Alignment:ATGAGCACTCAC--
---ACCACTCAAAA
C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGAGCACTCAC
--AASCACTCAA
C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

GLI2/MA0734.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGAGCACTCAC----
-AGACCACCCACGTCG
C G T A A C G T A C T G C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T T G C A A C T G T G C A A G T C A G T C G T C A A G T C G T A C G T A C C T G A G T A C T A C G C G A T G A T C A T C G