Information for 17-GTAAAGTGTTTG (Motif 20)

A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T C G T A A G T C
p-value:1e-3
log p-value:-9.020e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.0 +/- 0.0bp
Average Position of motif in Background149.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GTAAAGTGTTTG
-TTRAGTGSYK-
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGTTTG-
NTTAAGTGGTTNN
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTAAAGTGTTTG
-TTAAGTGCTT-
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGTTTG
NTCAAGTGGN--
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGTTTG
NTCAAGTGG---
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTAAAGTGTTTG
-TTAAGTGGT--
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GTAAAGTGTTTG--
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

ZBTB32/MA1580.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTAAAGTGTTTG
TGTACAGTAT---
A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAAAGTGTTTG
CTYRAGTGSY--
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTAAAGTGTTTG
-TTGAGTGSTT-
A C T G A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C T G
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T