Information for 2-CGTTTGCG (Motif 42)

A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A C G T A C G T A A G T C A C T G
p-value:1e-2
log p-value:-5.776e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif47.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background69.3 +/- 75.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGTTTGCG--
GCGCCTGCGCA
A C G T A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGTTTGCG-
TGCGTGGGCGT
A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T
G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTTTGCG----
GGGCCGTGTGCAAAAA
A C G T A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTTTGCG
VBSYGTCTGG-
A C G T A C G T A C G T A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

BARHL1/MA0877.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGCG
NCGTTTAN-
A C G T A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G
G T A C G A T C C T A G G C A T A C G T G C A T C G T A A T C G A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CGTTTGCG--
NRYTTCCGGY
A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

NRF(NRF)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGCG---
GCGCATGCGCAC
A C G T A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

CEBPG/MA0838.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CGTTTGCG----
--ATTGCGCAAT
A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGTTTGCG---
GCGCATGCGCAG
A C G T A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G A C G T A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGTTTGCG
TGTTTAC-
A G T C A C T G A C G T A C G T A C G T A C T G A G T C A C T G
A G C T T C A G A G C T G A C T C G A T C T G A A G T C A C G T