Information for 22-TAAAACTTTT (Motif 40)

A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T C G T A
p-value:1e-2
log p-value:-5.454e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif3629.2
Percentage of Background Sequences with motif3.94%
Average Position of motif in Targets50.2 +/- 7.3bp
Average Position of motif in Background102.1 +/- 80.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------TAAAACTTTT
AATGCAATAAAATTTAT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------TAAAACTTTT
CTACCAATAAAATTCT-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T A C G T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAAAACTTTT--
--AACCTTATAT
A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

ZNF652/MA1657.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAAAACTTTT
NTTAACTCTTTN
A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAAAACTTTT
NGYCATAAAWCH---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T A C G T A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAAAACTTTT
CYHATAAAAN----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C A C G T A C G T A C G T A C G T

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TAAAACTTTT--------
---GACTTTTAWTTTGAA
A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAAAACTTTT
-CAAGCTT--
A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T

HOXA13/MA0650.2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAAAACTTTT
CCCAATAAAAC----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C A C G T A C G T A C G T A C G T

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TAAAACTTTT
NCYAATAAAA-----
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T A G T A G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T