Information for 8-GTCACGGACG (Motif 24)

A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A G T C A C T G A C G T A C T G C G T A A G T C
p-value:1e-3
log p-value:-8.332e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets12.0 +/- 0.0bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GTCACGGACG
AGTCACGC---
A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T

PAX5/MA0014.3/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTCACGGACG
NNGGTCACGCTC-
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GTCACGGACG----
GTCACGCTCNCTGA
A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

HINFP/MA0131.2/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTCACGGACG---
-NCGCGGACGTTG
A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PAX1/MA0779.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTCACGGACG------
CGTCACGCATGACTGCA
A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

NR2F1(var.3)/MA1538.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTCACGGACG--
AAGGTCANTGACCTT
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C G T
C T G A C T G A A C T G T C A G A C G T A G T C T C G A T G C A A G C T T C A G T G C A G A T C T G A C G A C T G A C T

PAX9/MA0781.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTCACGGACG------
CGTCACGCATGACTGCA
A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A T G C A C T G G C A T A G T C T G C A A G T C A C T G A T G C G C T A G A C T A T C G C T G A T A G C G A C T C A T G T G A C G T C A

RAR:RXR(NR),DR0/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCACGGACG
AGGTCAAGGTCA
A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G
T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GTCACGGACG---
---GCGGACCBWA
A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A

TFEC/MA0871.2/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTCACGGACG
NGTCACGTGNN
A C G T A C T G A C G T A G T C C G T A A G T C A C T G A C T G C G T A A G T C A C T G
A C T G T C A G A C G T A T G C C G T A A G T C C T A G G C A T A T C G A T C G C A T G