Information for 22-AGTGCTTGATGG (Motif 25)

C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A G T C C G T A C G T A A C T G A G T C C G T A A G T C A C G T
p-value:1e-3
log p-value:-8.926e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background195.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGTGCTTGATGG-
NNTGATTGATGNN
C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AGTGCTTGATGG
--TGATTGATGA
C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

PBX1/MA0070.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGTGCTTGATGG
TTTGATTGATGN
C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

PB0144.1_Lef1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGTGCTTGATGG--
NNANTGATTGATNTTN
A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGTGCTTGATGG
--TGATKGATGR
C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G
A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGTGCTTGATGG--
--TGATTRATGGCY
C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGTGCTTGATGG--
NNANTGATTGATNNNN
A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGTGCTTGATGG-
-ATGATKGATGRC
C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G A C G T
A C G T C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

PH0112.1_Nkx2-3/Jaspar

Match Rank:9
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----AGTGCTTGATGG
CTTTAAGTACTTAATG-
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AGTGCTTGATGG
TTAAGTGCTT-----
A C G T A C G T A C G T C G T A A C T G A C G T A C T G A G T C A C G T A C G T A C T G C G T A A C G T A C T G A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T