Information for 10-TTGGACTGTCTG (Motif 18)

A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C C G T A A C T G A C G T A G T C A G T C C G T A C G T A
p-value:1e-3
log p-value:-9.078e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets189.0 +/- 0.0bp
Average Position of motif in Background189.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TTGGACTGTCTG-
-----CTGTCTGG
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGGACTGTCTG-
NNATTGGACTTTNGNN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTGGACTGTCTG------
-NNTNNTGTCTGGNNTNG
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TTGGACTGTCTG-
---VBSYGTCTGG
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

TEAD4/MA0809.2/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTGGACTGTCTG
NCTGGAATGTNN-
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G
A T G C G A T C C G A T C T A G T C A G G C T A T C G A C G A T A C T G G A C T C T A G C T A G A C G T

TEAD1/MA0090.3/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGGACTGTCTG
NNCTGGAATGTNN-
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G
A C T G A T G C G A T C G C A T C T A G C A T G G C T A T C G A G A C T A C T G G A C T C T A G C T A G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TTGGACTGTCTG-
-----TWGTCTGV
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

TEAD2/MA1121.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTGGACTGTCTG
GNNTGGAATGTGN-
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G
A T C G T A C G G A T C C G A T C T A G T C A G G C T A T C G A G A C T A C T G A G C T C T A G C T G A A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TTGGACTGTCTG
-TGGAATGT---
A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTGGACTGTCTG
NNTGGACTTTGNN
A C G T A C G T A C G T A C T G A C T G C G T A A G T C A C G T A C T G A C G T A G T C A C G T A C T G
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A