| p-value: | 1e-8 |
| log p-value: | -2.063e+01 |
| Information Content per bp: | 1.857 |
| Number of Target Sequences with motif | 9.0 |
| Percentage of Target Sequences with motif | 1.09% |
| Number of Background Sequences with motif | 26.5 |
| Percentage of Background Sequences with motif | 0.05% |
| Average Position of motif in Targets | 95.6 +/- 48.9bp |
| Average Position of motif in Background | 99.3 +/- 50.1bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.44 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0064.1_Hoxb9/Jaspar
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA---- AGAGCCATAAAATTCG |
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Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 2 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA --VGCCATAAAA |
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CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA-- --NGYCATAAAWCH |
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Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | AAAACCCTAAAA --KGCCATAAAA |
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|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA- -HDGYAATGAAAN |
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|
|
PH0047.1_Hoxa11/Jaspar
| Match Rank: | 6 |
| Score: | 0.60 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AAAACCCTAAAA--- TAAAGTCGTAAAACAT |
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|
|
HOXB13/MA0901.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.59 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA--- -AACCAATAAAATTT |
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|
|
PH0066.1_Hoxc11/Jaspar
| Match Rank: | 8 |
| Score: | 0.59 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -AAAACCCTAAAA--- TAAAGTCGTAAAATAG |
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|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 9 |
| Score: | 0.58 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA----- AATGCAATAAAATTTAT |
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|
|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 10 |
| Score: | 0.58 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | AAAACCCTAAAA- ---GTCATAAAAN |
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