Information for 23-CCACAGAGTA (Motif 37)

A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A C G T A G T C A C G T A C T G A C G T A C T G A C T G
p-value:1e-2
log p-value:-5.489e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.4 +/- 50.0bp
Average Position of motif in Background40.5 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)5.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGAGTA
AAACCACAGAN--
A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCACAGAGTA
NWAACCACADNN--
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGAGTA
AAACCACAGC---
A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCACAGAGTA
NAAACCACAG----
A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCACAGAGTA-----
GCACAYAGTAGGKCY
A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G A T C T C G A A T G C T C G A A G C T C T G A A C T G A C G T C T G A A C T G A C T G A C G T A G T C G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCACAGAGTA
AAACCACANN---
A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

Dmrt1/MA1603.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCACAGAGTA--
GATACAAAGTATC
A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T
C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCACAGAGTA
-CACAGN---
A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACAGAGTA
ATCCAC------
A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCACAGAGTA----
GHTACAWTGTADCHR
A C G T A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A