Information for 16-GCCAATGCAA (Motif 32)

A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C C G T A A C G T A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-7.041e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets38.0 +/- 0.0bp
Average Position of motif in Background121.8 +/- 84.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATGCAA
NTGGCCAATGAG-
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCCAATGCAA-----
TGCCAAAATAAACANN
A C G T A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

POU5F1/MA1115.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCCAATGCAA---
--ATATGCAAATT
A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCAATGCAA
CGTGCCAAG----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCAATGCAA
AGCCAATCGG-
A C G T A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCCAATGCAA
GGYAATGAAA
A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A

RFX3/MA0798.2/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GCCAATGCAA---
TNCCATAGCAACNN
A C G T A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GCCAATGCAA
ACTAGCCAATCA--
A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCAATGCAA----
--AGATGCAATCCC
A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCCAATGCAA
GGCMATGAAA
A C T G A G T C A G T C C G T A C G T A A C G T A C T G A G T C C G T A C G T A
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A