Information for 6-CTCCGGTTAATG (Motif 8)

A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T C G T A C G T A A G T C A G T C A C T G A C T G C G T A A C T G
p-value:1e-4
log p-value:-9.232e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:CTCCGGTTAATG-
-----GKTAATGR
A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A

NKX6-3/MA1530.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTCCGGTTAATG--
-----TTTAATGAN
A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

ETV2/MA0762.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CTCCGGTTAATG
TATTTCCGGTT----
A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G
G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T A C G T A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTCCGGTTAATG---
-----GTTAATGGCC
A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

NKX6-2/MA0675.1/Jaspar

Match Rank:5
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTCCGGTTAATG--
------TTAATTAN
A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

ETS2/MA1484.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTCCGGTTAATG
ACTTCCGGTN----
A C G T A C G T A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G
T C G A A G T C C G A T A C G T A T G C G A T C A C T G A T C G G A C T G A T C A C G T A C G T A C G T A C G T

PH0073.1_Hoxc9/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCGGTTAATG------
--NNAATTAATGACCNNN
A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

HOXC4/MA1504.1/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCCGGTTAATG--
------NTAATGAN
A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G C T C G T A C G T A A G C T A C T G C T G A A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCCGGTTAATG--
------TTAATTAN
A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

SIX1/MA1118.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTCCGGTTAATG
TATCAGGTTAC--
A C G T A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T C G T A C G T A A C G T A C T G
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T A C G T