Information for 9-TCTCATGGCG (Motif 15)

A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A G T C C G T A A C G T A C T G C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.372e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.2/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TCTCATGGCG---
--AGATGGCGGCG
A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCTCATGGCG-
NNGTCGCGTGNCAC
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

USF1/MA0093.3/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCTCATGGCG-
NNGTCACATGACNN
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G A C G T
C T G A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T A T C G T C G A A G T C G A T C G T C A

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTCATGGCG
NNCTAATGGNN
A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G
A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

USF2/MA0526.3/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCTCATGGCG-
NNGTCACATGACNN
A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G A C G T
C G T A C T A G T C A G A G C T T A G C G T C A A G T C T C G A C A G T T A C G T C G A A G T C G A T C G T C A

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTCATGGCG
GTCACGTGGM-
A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G
T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCTCATGGCG
GTCACATGAY-
A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

MXI1/MA1108.2/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TCTCATGGCG
GACACATGGC-
A C G T A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C A C G T

HOXA7/MA1498.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTCATGGCG
-GTAATTGC-
A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G
A C G T A T C G A C G T G T C A C G T A C G A T A C G T T C A G T A G C A C G T

HOXD8/MA0910.2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCTCATGGCG
-GTAATTGC-
A C G T A G T C A C G T A G T C C G T A A C G T A C T G A C T G A G T C A C T G
A C G T A C T G A C G T G T C A C G T A A C G T A C G T C T A G A G T C A C G T