Information for 7-GATGGCGA (Motif 30)

A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A
Reverse Opposite:
A G C T A G T C C T A G A G T C T G A C C G T A C G A T T G A C
p-value:1e-3
log p-value:-9.016e+00
Information Content per bp:1.590
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif10.86%
Number of Background Sequences with motif3594.9
Percentage of Background Sequences with motif7.45%
Average Position of motif in Targets107.7 +/- 51.3bp
Average Position of motif in Background100.5 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.2/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GATGGCGA--
AGATGGCGGCG
A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A A C G T A C G T
G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GATGGCGA-
CAAGATGGCGGC
A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NEUROD1/MA1109.1/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GATGGCGA
GGACAGATGGCAG
A C G T A C G T A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A
C A T G T C A G T C G A T G A C C G T A A C T G T G C A G C A T C A T G A C T G A G T C T C G A T A C G

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GATGGCGA-
CAAGATGGCGGC
A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATGGCGA-----
GAATGACGAATAAC
A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A A C G T A C G T A C G T A C G T A C G T
T A C G C T G A T C G A A C G T C T A G C G T A A G T C C T A G G T C A C T G A A G C T C G T A C G T A G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GATGGCGA
AACAGATGGC--
A C G T A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:7
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GATGGCGA
GGAACAGATGGCA-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A
C T A G C T A G T C G A T G C A T A G C T C G A A C T G T G C A G A C T C A T G A C T G A G T C T G C A A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GATGGCGA
AACAGATGGT--
A C G T A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T

HAND2/MA1638.1/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GATGGCGA
ACCAGATGGC--
A C G T A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A
C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GATGGCGA
GTTAATGGCC-
A C G T A C G T A C G T A C T G G C T A G C A T A C T G T C A G G A T C T C A G T C G A
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T