Information for 3-GTCGGGTC (Motif 39)

A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C A G T C A C T G C G T A A G T C
p-value:1e-2
log p-value:-5.499e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif42.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets151.0 +/- 0.0bp
Average Position of motif in Background107.0 +/- 100.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GTCGGGTC-----
AGAGCGGGGTCAAGTA
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GTCGGGTC-----
CGCGCCGGGTCACGTA
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GTCGGGTC-
---AGGTCA
A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTCGGGTC--
NRRGGGTCTT
A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T

NR2C1/MA1535.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCGGGTC--
-CGAGGTCAC
A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T
A C G T G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GTCGGGTC--
--GAGGTCAT
A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T
A C G T A C G T T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTCGGGTC----
NTNTGGGGGGTCNNNA
A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GTCGGGTC
CTGTCTGG--
A C G T A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTCGGGTC---
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GTCGGGTC------
NTNNNGGGGTCANGNNN
A C G T A C G T A C G T A C T G A C G T A G T C A C T G A C T G A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A