Information for 5-GAGCAACAACCT (Motif 6)

A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C G T A C T G A C G T A C G T A C T G A G T C A C G T A G T C
p-value:1e-4
log p-value:-9.245e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.0 +/- 0.0bp
Average Position of motif in Background176.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GAGCAACAACCT-
-GGCCACACCCAN
A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T A C G T
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAACAACCT
NTAGCAACG----
A C G T A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAGCAACAACCT--
CAAACAACAACACCT
A C G T A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

ZNF341/MA1655.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGCAACAACCT-
-GGGAACAGCCAC
A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T A C G T
A C G T C A T G C T A G T A C G T G C A C T G A A T G C T C G A A T C G A T G C G T A C T C G A T A G C

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGCAACAACCT
-GGCCACACCCA
A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T
A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GAGCAACAACCT
SCCTAGCAACAG---
A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

RFX1/MA0509.2/Jaspar

Match Rank:7
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GAGCAACAACCT
TNCCATAGCAACNN---
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G A C G T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGCAACAACCT
--GGAACAGCCG
A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T
A C G T A C G T C T A G A C T G T G C A G T C A A T G C C G T A A T C G A T G C A G T C C T A G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GAGCAACAACCT
--GCCACACCCA
A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGCAACAACCT-
NAGGTCAATGACCTC
A C G T A C G T A C T G C G T A A C T G A G T C C G T A C G T A A G T C C G T A C G T A A G T C A G T C A C G T A C G T
T C G A T C G A C A T G C A T G A C G T A G T C T C G A C G T A G A C T T C A G T G C A G T A C G A T C A G C T A G T C