Information for 19-GATGTTTGGC (Motif 32)

A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A C G T A C G T A A G T C C G T A A C G T A G T C
p-value:1e-3
log p-value:-6.958e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif37.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background129.2 +/- 142.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:GATGTTTGGC---
----NTTGGCANN
A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GATGTTTGGC----
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GATGTTTGGC----
--TGATTGGCTANN
A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYC/MA1644.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GATGTTTGGC-
NCTGATTGGNN
A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C A T G T C A G G A T C A G C T

NFYA/MA0060.3/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GATGTTTGGC-
NCTGATTGGNN
A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T
A C G T A T G C A G C T A T C G C T G A A G C T C G A T C T A G T C A G G A C T A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GATGTTTGGC----
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GATGTTTGGC-
TGATTTATGGCC
A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T
C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GATGTTTGGC---
---NNTTGGCANN
A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

ZBTB18/MA0698.1/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GATGTTTGGC
CATCCAGATGTTC---
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATGTTTGGC
-TTGATTGN-
A C T G C G T A A C G T A C T G A C G T A C G T A C G T A C T G A C T G A G T C
A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T