Information for 7-TGAGTGCTGCTG (Motif 13)

A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C C G T A A C T G A G T C C G T A A G T C A C G T A G T C C G T A
p-value:1e-6
log p-value:-1.576e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.3 +/- 40.1bp
Average Position of motif in Background188.0 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGCTGCTG
TTAAGTGCTT---
A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

NKX2-5/MA0063.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGAGTGCTGCTG
NNTTGAGTGNN----
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTGCTGCTG
CTTGAGTGGCT---
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGAGTGCTGCTG
TTRAGTGSYK---
A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGCTGCTG
GTGAGTGNAC---
A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
C A T G C A G T C T A G C G T A C T A G G C A T C T A G A C G T T G C A T A G C A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGAGTGCTGCTG---
---NNGCTTCTGTNN
A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGAGTGCTGCTG
TTGAGTGSTT---
A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGAGTGCTGCTG
NNGCGTGTGTGCNGCN-
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGAGTGCTGCTG
CTYRAGTGSY----
A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGAGTGCTGCTG
NNNTTGAGTGGNNN--
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C G T A C T G A G T C A C G T A C T G A G T C A C G T A C T G
C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A A C G T A C G T