Information for 4-TTGGCTACGT (Motif 11)

A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C G T C G T A A C T G A G T C A G T C C G T A C G T A
p-value:1e-3
log p-value:-9.075e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGGCTACGT
TGATTGGCTANN-
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCTACGT
NTTGGCANN--
A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTGGCTACGT--
--GGGTACGTGC
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGGCTACGT---
CTACTTGGATACGGAAT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTGGCTACGT-----
ACTTGCTACCTACACC
A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TTGGCTACGT
TWGTCTGV--
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGGCTACGT-----
ACATGCTACCTAATAC
A C G T A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTGGCTACGT--
---GCCACGTGT
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:TTGGCTACGT---
-----TACGTGCV
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

GMEB2/MA0862.1/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTGGCTACGT--
----TTACGTAA
A C G T A C G T A C T G A C T G A G T C A C G T C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T C T G A G T A C A T C G A G C T T G C A T G C A