Information for 4-TCACGAGCTT (Motif 9)

A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A C G T A G T C A C T G A C G T A C T G C G T A
p-value:1e-3
log p-value:-8.933e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets145.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFE3/MA0831.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCACGAGCTT
GTCACGTG---
A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T C A G A C G T A G T C C G T A A G T C T C A G G C A T A C T G A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCACGAGCTT
GGTCACGTGC--
A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---TCACGAGCTT
NHRTCACGACDN-
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCACGAGCTT
ATCACGTGAT-
A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T A C G T

ARNT2/MA1464.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCACGAGCTT
GTCACGTGCC-
A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T C A G C G A T T G A C C T G A A G T C C T A G G A C T C A T G G T A C A T G C A C G T

TFEC/MA0871.2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCACGAGCTT
NGTCACGTGNN-
A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
A C T G T C A G A C G T A T G C C G T A A G T C C T A G G C A T A T C G A T C G C A T G A C G T

bHLHE41(bHLH)/proB-Bhlhe41-ChIP-Seq(GSE93764)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCACGAGCTT
NGKCACGTGM--
A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
T C A G T A C G C A G T T G A C C G T A A G T C T C A G G C A T A C T G G T A C A C G T A C G T

TCFL5/MA0632.2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCACGAGCTT
TCACGCGCAC
A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
A C G T A G T C C T G A A G T C C T A G G A T C T C A G T A G C G T C A G T A C

BHLHE40/MA0464.2/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCACGAGCTT
GTCACGTGAN-
A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T

RARB(var.3)/MA1552.1/Jaspar

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCACGAGCTT
AAGGTCATGACCTT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G C G T A A C T G A G T C A C G T A C G T
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T