Information for 5-TCCABTCTCAMT (Motif 5)

A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
Reverse Opposite:
C G T A C A T G A C G T T A C G C G T A A T C G G T C A T A G C A C G T C T A G A C T G C G T A
p-value:1e-5
log p-value:-1.230e+01
Information Content per bp:1.610
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif6071.7
Percentage of Background Sequences with motif6.33%
Average Position of motif in Targets86.9 +/- 57.7bp
Average Position of motif in Background99.7 +/- 85.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MSANTD3/MA1523.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCCABTCTCAMT
GTACACTCAC---
A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCCABTCTCAMT
AGCCAATCAGA--
A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCCABTCTCAMT
AACCAATCAGA--
A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCABTCTCAMT
-TCAGTCTT---
A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCABTCTCAMT
TAACCACTCAAGAA
A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCABTCTCAMT-
CTTTCANTATGACTV
A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----TCCABTCTCAMT--
NAGTTTCABTHTGACTNW
A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

SOX2/MA0143.4/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCCABTCTCAMT
NNCCATTGTNN--
A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCABTCTCAMT---
NNAATTCTCGNTNAN
A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T A C G T A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCCABTCTCAMT
NNGCACCTTTCTCC--
A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T A T G C C G A T A G T C G T C A G T A C C G A T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T