Information for 8-GCCAATAAGGGC (Motif 9)

A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
Reverse Opposite:
A C T G A G T C A G T C G A T C A G C T C A G T G T C A A C G T A C G T C T A G A C T G A G T C
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.803
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets111.1 +/- 53.3bp
Average Position of motif in Background166.1 +/- 42.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCAATAAGGGC
AGCCAATCGG---
A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCAATAAGGGC----
TGCGCATAGGGGAGGAG
A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

NFYB/MA0502.2/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATAAGGGC
NTGGCCAATGAG---
A C G T A C G T A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCCAATAAGGGC
ACTAGCCAATCA----
A C G T A C G T A C G T A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCAATAAGGGC
CGTGCCAAG------
A C G T A C G T A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFYA/MA0060.3/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCAATAAGGGC
AACCAATCAGA--
A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
T C G A C T G A A G T C G A T C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T

NFYC/MA1644.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GCCAATAAGGGC
AGCCAATCAGA--
A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GCCAATAAGGGC-
CACCGCTAATTAGNNGN
A C G T A C G T A C G T A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCAATAAGGGC
GGTGCCAAGT-----
A C G T A C G T A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

NFIC/MA0161.2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATAAGGGC
NNTGCCAAGNN----
A C G T A C G T A C G T A C T G A G T C G A T C C G T A G T C A A C G T G T C A C T G A C A T G C T A G A C T G T A G C
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A A C G T A C G T A C G T A C G T