Information for 3-SSTTGWCTKTAC (Motif 3)

A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A G T A C C G T A A C T G C G A T A G T C C G T A C G T A T A C G T A C G
p-value:1e-6
log p-value:-1.473e+01
Information Content per bp:1.847
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif83.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets106.3 +/- 35.7bp
Average Position of motif in Background106.2 +/- 73.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:SSTTGWCTKTAC
--TTGACTTTT-
A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

ZBTB32/MA1580.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:SSTTGWCTKTAC-
---ATACTGTACA
A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C A C G T
A C G T A C G T A C G T G C T A G A C T C T G A T G A C G C A T A T C G A C G T G C T A G A T C C G T A

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SSTTGWCTKTAC-
---TGTCTAGACA
A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C A C G T
A C G T A C G T A C G T C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SSTTGWCTKTAC-
---TGTCTAGACG
A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C A C G T
A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:SSTTGWCTKTAC
--TWGTCTGV--
A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--SSTTGWCTKTAC
NNACTTGCCTT---
A C G T A C G T A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

FOXP1/MA0481.3/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:SSTTGWCTKTAC--
---NNTGTTTACNN
A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C G A T T C A G C G A T C A G T C A G T G C T A G A T C G C T A G C A T

GATA4/MA0482.2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--SSTTGWCTKTAC
TTCCTTATCTTT--
A C G T A C G T A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C
G C A T G C A T A G T C G A T C G C A T G C A T G T C A G C A T A G T C G C A T A G C T G C A T A C G T A C G T

FOXA2/MA0047.3/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:SSTTGWCTKTAC--
---NNTGTTTACAT
A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G A T T C A G C G A T C A G T C A G T C G T A G A T C G C T A G A C T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--SSTTGWCTKTAC--
NNATTGGACTTTNGNN
A C G T A C G T A T C G A T C G A C G T A C G T A C T G C G T A A G T C C G A T C A T G A C G T C G T A A G T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C