Information for 10-GTATAAATGTGC (Motif 11)

A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A G T C C G T A A C G T A C G T A C G T C G T A A C G T C G T A A G T C
p-value:1e-3
log p-value:-9.118e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets195.0 +/- 0.0bp
Average Position of motif in Background134.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTATAAATGTGC---
GTATAAAAGGCGGGG
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTATAAATGTGC---
GTATAAAAGGCGGGG
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTATAAATGTGC--
NTTNTATGAATGTGNNC
A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0198.1_Zfp128_2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTATAAATGTGC-
NNTATANATATACN
A C G T A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C A C G T
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTATAAATGTGC
NNTNTCATGAATGT--
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

BARHL1/MA0877.2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTATAAATGTGC
--CTAAACGG--
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C
A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GTATAAATGTGC--
GGAGAAAGGTGCGA
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GTATAAATGTGC---
AYATGYATATGCATR
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTATAAATGTGC
--ATGMATATDC
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C
A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

MXI1/MA1108.2/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GTATAAATGTGC-
---NNCATGTGNN
A C T G A C G T C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T T A C G T G A C G A T C C T G A A G C T T C A G G A C T C T A G A G C T G A T C