Information for 9-AAGGTTCAGATC (Motif 11)

C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A G T C A C G T A C T G C G T A C G T A A G T C A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.057e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets178.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGTTCAGATC
TGAGTTCA----
C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGGTTCAGATC
CAAAGKTCAA---
A C G T C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T A C G T

NR1I3/MA1534.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGGTTCAGATC
AAAGTTCAT---
C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T

NR6A1/MA1541.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AAGGTTCAGATC--
GTCAAGTTCAAGGTCAA
A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C A C G T A C G T
A C T G A G C T A T G C C T G A T G C A C A T G C A G T A G C T A G T C C G T A G T C A C A T G C A T G A C G T A G T C C T G A C G T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGGTTCAGATC-
-ASTTTCACTTCC
C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C A C G T
A C G T C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C

GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AAGGTTCAGATC--
NNAGATNVNWATCTN
A C G T C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C A C G T A C G T
C T A G T G A C C G T A A C T G C G T A A C G T G C T A T C G A A G C T C G A T C G T A A C G T A G T C C G A T T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTCAGATC
CAAAGGTCAG---
A C G T C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGGTTCAGATC
CAAGCTT------
A C G T C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AAGGTTCAGATC
TCCAAAGTCCAAA--
A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGGTTCAGATC
TCCAAAGTCCAGA--
A C G T A C G T A C G T C G T A C G T A A C T G A C T G A C G T A C G T A G T C C G T A A C T G C G T A A C G T A G T C
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A A C G T A C G T