Information for 3-TCGCTGCACG (Motif 9)

A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C T G C G T A
p-value:1e-4
log p-value:-9.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TCGCTGCACG---
AATCGCACTGCATTCCG
A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCGCTGCACG--
NNGCNCTGCGCGGC
A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TCGCTGCACG---
-----GCACGTAY
A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TCGCTGCACG---
-----GCACGTNC
A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF1A/MA1106.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TCGCTGCACG---
---NNGCACGTNC
A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCGCTGCACG---
CCACACAGCAGGAGA
A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCGCTGCACG--
----BGCACGTA
A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCGCTGCACG---
CCACACAGCAGGAGA
A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCGCTGCACG---
GAGCACAGCAGGACA
A C G T A C G T A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCGCTGCACG-----
-----GCACGTACCC
A C G T A G T C A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C