Information for 20-CCTGCCTCCAAT (Motif 26)

A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C T G C G T A A C T G A C T G A G T C C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.271e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets87.0 +/- 0.0bp
Average Position of motif in Background152.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCCTCCAAT
NNACTTGCCTT----
A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTGCCTCCAAT----
-CTGCCWVCTTTTRTA
A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A C T A C T G G A T C G T A C C G T A T G A C A G T C C G A T A G C T A C G T A C G T C T A G G A C T C T G A

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCCTCCAAT
CAGCACCTGCCCC----
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C A C G T A C G T A C G T A C G T

TCF4/MA0830.2/Jaspar

Match Rank:4
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCCTCCAAT
CGGCACCTGCCCC----
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
A T G C C A T G T A C G T A G C T C G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C A C G T A C G T A C G T A C G T

ETV4/MA0764.2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCCTCCAAT
NNCTTCCTGN---
A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
A G T C T C G A T G A C C A G T C G A T G T A C T A G C A C G T A T C G A G C T A C G T A C G T A C G T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCTGCCTCCAAT
CGCACCTGCCG-----
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTGCCTCCAAT--
ATTTGCATACAATGG
A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCTGCCTCCAAT
NAGCCCCGCCCCCN--
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T

TCF3/MA0522.3/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCTGCCTCCAAT
CGCACCTGCCC-----
A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTGCCTCCAAT
-CTGCCCGCA--
A G T C A G T C A C G T A C T G A G T C A G T C A C G T A G T C A G T C C G T A C G T A A C G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T