Information for 5-AAAAACCAATTA (Motif 14)

C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
p-value:1e-3
log p-value:-9.074e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background83.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:forward strand
Alignment:AAAAACCAATTA----
AAAAACCAATTAAGAA
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PH0005.1_Barhl1/Jaspar

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AAAAACCAATTA----
AACAACCAATTAATTC
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:AAAAACCAATTA----
CAAAACCAATTAATTT
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.77
Offset:3
Orientation:forward strand
Alignment:AAAAACCAATTA--
---AACCAATTAAT
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T

PH0107.1_Msx2/Jaspar

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAAAACCAATTA-----
GAAGACCAATTAGCGCT
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T

Nobox/MA0125.1/Jaspar

Match Rank:6
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:AAAAACCAATTA
----ACCAATTA
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A
A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A

PH0088.1_Isl2/Jaspar

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAAACCAATTA----
CAAAATCAATTAATTT
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
G T A C G C T A G T C A G T C A G T C A A G C T G A T C G T C A G T C A G A C T G A C T C G T A C T G A C A G T C G A T G A C T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.73
Offset:5
Orientation:forward strand
Alignment:AAAAACCAATTA-
-----CCAATTAA
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.72
Offset:2
Orientation:forward strand
Alignment:AAAAACCAATTA
--TAATCAATTA
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A
A C G T A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.72
Offset:5
Orientation:forward strand
Alignment:AAAAACCAATTA-
-----CCAATTAG
C G T A C G T A C G T A C G T A C G T A A G T C A G T C C G T A C G T A A C G T A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G