Information for 1-TTTCACAGTT (Motif 5)

A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T
Reverse Opposite:
C G T A C G T A A T G C A C G T C T A G A C G T A C T G C G T A G T C A G T C A
p-value:1e-6
log p-value:-1.507e+01
Information Content per bp:1.890
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif161.4
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets99.0 +/- 62.0bp
Average Position of motif in Background97.3 +/- 53.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTCACAGTT
TTTCACACCT
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:TTTCACAGTT
TTTCACACCT
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TTTCACAGTT-
NTTTTCACACCTT
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTCACAGTT
KTTCACACCT
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTTCACAGTT----
NNTTTTCACACCTTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTCACAGTT-
-TTCACACCTT
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTCACAGTT-
-TTMACACCTT
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T
A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTCACAGTT-
TTTCACACCTN
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTCACAGTT-
CTTCACACCTA
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T A C G T
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TTTCACAGTT
--TCACACCT
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T