Information for 16-GAAGCACTGACA (Motif 15)

A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C C G T A A C T G A C G T A C T G A G T C A C G T A C G T A G T C
p-value:1e-5
log p-value:-1.158e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAAGCACTGACA
-AAGCACTTAA-
A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAGCACTGACA----
CAATCACTGGCAGAAT
A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GAAGCACTGACA-
------TTGACAG
A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GAAGCACTGACA-
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAAGCACTGACA--
----VGCTGWCAVB
A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCACTGACA
NGAAGC-------
A C G T A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAAGCACTGACA-
-----RHTGWCAR
A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GAAGCACTGACA
----ARNTGACA
A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

PH0117.1_Nkx3-1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAAGCACTGACA--
TACTAAGTACTTAAATG
A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAAGCACTGACA-
-HDGYAATGAAAN
A C T G C G T A C G T A A C T G A G T C C G T A A G T C A C G T A C T G C G T A A G T C C G T A A C G T
A C G T G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A