Information for 1-AGCAGCTGCACC (Motif 1)

C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C G T
p-value:1e-15
log p-value:-3.520e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 57.3bp
Average Position of motif in Background141.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:1
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:AGCAGCTGCACC
DGCAGCTGCYSS
C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGCACC
AGCAGCTGCT--
C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---AGCAGCTGCACC--
CTCAGCAGCTGCTACTG
A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

MYOG/MA0500.2/Jaspar

Match Rank:4
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCTGCACC
NNGCAGCTGCNN-
A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-AGCAGCTGCACC
CAGCAGCTGN---
A C G T C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

ASCL1/MA1100.2/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGCACC
GGCAGCTGCC--
C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
T C A G T C A G A G T C G C T A A T C G T A G C C A G T C T A G A G T C A G T C A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGCACC
AGCAGCTGCTNN
C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:AGCAGCTGCACC
CGCAGCTGCG--
C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGCAGCTGCACC
AACAGCTGCAG-
C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:10
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGCAGCTGCACC
NNCAGCTGNN--
C G T A A C T G A G T C C G T A A C T G A G T C A C G T A C T G A G T C C G T A A G T C A G T C
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T A C G T