Information for 2-TTCATACTCT (Motif 7)

A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T
Reverse Opposite:
C T G A A C T G C T G A A C T G C A G T G C T A A G C T A T C G C G T A T G C A
p-value:1e-10
log p-value:-2.374e+01
Information Content per bp:1.829
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.06%
Number of Background Sequences with motif462.6
Percentage of Background Sequences with motif0.96%
Average Position of motif in Targets92.0 +/- 44.6bp
Average Position of motif in Background101.7 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TTCATACTCT
GACCACATTCATACAAT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTCATACTCT---
AATNTTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTCATACTCT-
ACATTCATGACACG
A C G T A C G T A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCATACTCT
ATGMATATDC-
A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCATACTCT----
TATCATAATTAAGGA
A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T A C G T A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCATACTCT
TTTCATTRCC-
A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T
G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCATACTCT---
ANANNTGATACCCTATN
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTCATACTCT
TTTCATKGCC-
A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T
G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TTCATACTCT
ATGAATATTC-
A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

NFIL3/MA0025.2/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TTCATACTCT
NNATTGCATAANN-
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A C G A T G T C A T G A C A G C T T G A C G A C T
C G T A C A G T T C G A G C A T C A G T C T A G G A T C C T G A G A C T G T C A C G T A A G C T G C T A A C G T