Information for 1-WMCATTGG (Motif 4)

G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C T G A C G T C A C G T A A C G T A C T G A C T G C G T A
p-value:1e-5
log p-value:-1.242e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2149.5
Percentage of Background Sequences with motif2.83%
Average Position of motif in Targets96.8 +/- 70.7bp
Average Position of motif in Background99.3 +/- 70.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.2/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:WMCATTGG----
CTCATTGGCCAG
G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A T G C A G C T A T G C G C T A A G C T C A G T C A T G C T A G A G T C G A T C T G C A T C A G

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:WMCATTGG--
CCGATTGGCT
G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

SOX2/MA0143.4/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-WMCATTGG--
NNCCATTGTNN
A C G T G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-WMCATTGG--
ATCCATTAGCA
A C G T G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C T G A A C G T G A T C G T A C C T G A G C A T G A C T G C T A C T A G A G T C T G C A

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:WMCATTGG-----
-TGATTGGCTANN
G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

SOX13/MA1120.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-WMCATTGG--
NNCCATTGTNN
A C G T G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:WMCATTGG-
CTCATTGTC
G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:WMCATTGG---
-CCATTGTTYB
G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:WMCATTGG--
-CCATTGTTC
G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:WMCATTGG-----
-CCATTGTTYYBB
G C A T G T A C A G T C C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G