Information for 16-TGAGCACAAAAT (Motif 16)

A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A C G T A G T C C G T A
p-value:1e-3
log p-value:-9.054e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets137.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----TGAGCACAAAAT-
TACATGTGCACATAAAA
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGAGCACAAAAT--
ARGAGGMCAAAATGW
A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGAGCACAAAAT-
CAGATGTGCACATACGT
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGAGCACAAAAT---
CGAAGCACACAAAATA
A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGAGCACAAAAT--
ATTTGCATACAATGG
A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGAGCACAAAAT-
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGAGCACAAAAT
NWAACCACADNN-
A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGAGCACAAAAT
--AAAACAAAGG
A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGAGCACAAAAT-
-BMRVACAAWGGV
A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T
A C G T A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGAGCACAAAAT----
AACACCAAAACAAAGGA
A C G T A C G T A C T G C G T A A C T G A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A