| p-value: | 1e-2 |
| log p-value: | -5.277e+00 |
| Information Content per bp: | 1.795 |
| Number of Target Sequences with motif | 134.0 |
| Percentage of Target Sequences with motif | 7.14% |
| Number of Background Sequences with motif | 2711.4 |
| Percentage of Background Sequences with motif | 5.69% |
| Average Position of motif in Targets | 107.3 +/- 54.3bp |
| Average Position of motif in Background | 100.1 +/- 61.6bp |
| Strand Bias (log2 ratio + to - strand density) | 0.0 |
| Multiplicity (# of sites on avg that occur together) | 1.17 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATGCGTAT-- ATGMATATDC |
|
|
|
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.74 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | ATGCGTAT-- ATGAATATTC |
|
|
|
POU3F4/MA0789.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.71 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATGCGTAT TATGCAAAT |
|
|
|
PH0145.1_Pou2f3/Jaspar
| Match Rank: | 4 |
| Score: | 0.71 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATGCGTAT---- TTGTATGCAAATTAGA |
|
|
|
PH0144.1_Pou2f2/Jaspar
| Match Rank: | 5 |
| Score: | 0.71 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATGCGTAT---- TTGTATGCAAATTAGA |
|
|
|
POU2F2/MA0507.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.71 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATGCGTAT--- ATATGCAAATNNN |
|
|
|
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 7 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATGCGTAT--- TATGCWAATBAV |
|
|
|
POU5F1B/MA0792.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.70 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATGCGTAT TATGCAAAT |
|
|
|
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 9 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ATGCGTAT TTATGCAAAT |
|
|
|
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 10 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATGCGTAT--- WATGCAAATGAG |
|
|
|