| p-value: | 1e-2 |
| log p-value: | -6.875e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 151.1 |
| Percentage of Background Sequences with motif | 0.03% |
| Average Position of motif in Targets | 41.0 +/- 0.0bp |
| Average Position of motif in Background | 126.7 +/- 169.2bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
HOXD9/MA0913.2/Jaspar
| Match Rank: | 1 |
| Score: | 0.88 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTTATTAC NTTTTATTGC |
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|
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer
| Match Rank: | 2 |
| Score: | 0.87 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTTATTAC NTTTTATGAC |
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|
|
CDX4/MA1473.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.86 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTTATTAC- GTTTTATTGCC |
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|
|
HOXA10/MA0899.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.86 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTTATTAC- NTTTTATTACN |
|
|
|
CDX1/MA0878.2/Jaspar
| Match Rank: | 5 |
| Score: | 0.83 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTTATTAC- GTTTTATGGCC |
|
|
|
PH0046.1_Hoxa10/Jaspar
| Match Rank: | 6 |
| Score: | 0.83 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---GTTTTATTAC--- TNAATTTTATTACCTN |
|
|
|
PH0013.1_Cdx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.83 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTTATTAC---- NAATTTTATTACCNNN |
|
|
|
PH0012.1_Cdx1/Jaspar
| Match Rank: | 8 |
| Score: | 0.82 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GTTTTATTAC---- NAATTTTATTACCTNN |
|
|
|
PH0075.1_Hoxd10/Jaspar
| Match Rank: | 9 |
| Score: | 0.79 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GTTTTATTAC--- NTNAATTTTATTGNATT |
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|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 10 |
| Score: | 0.79 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GTTTTATTAC-- NTTTCATTRCHD |
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|
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