Information for 17-GTGCATGAAT (Motif 32)

A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C C G T A A C G T A C T G A G T C C G T A A G T C
p-value:1e-3
log p-value:-7.058e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif66.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets31.0 +/- 0.0bp
Average Position of motif in Background74.0 +/- 92.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTGCATGAAT--
NNTNTCATGAATGT
A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GTGCATGAAT------
NTTNTATGAATGTGNNC
A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GTGCATGAAT---
ACTATGAATGAATGAT
A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

ZNF24/MA1124.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GTGCATGAAT-
GAATGAATGAATG
A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GTGCATGAAT----
----ATGAATATTC
A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GTGCATGAAT----
----ATGMATATDC
A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0171.1_Sox18_2/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GTGCATGAAT-------
-NNNNTGAATTCANNNC
A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGCATGAAT----
-GTCATCAATCATT
A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C T A G G A C T G A T C C T G A C A G T G T A C G T C A G C T A G C A T G T A C G C T A G C A T G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTGCATGAAT--
CAATTGCAAAAATAT
A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGCATGAAT------
GAAGATCAATCACTTA
A C T G A C G T A C T G A G T C C G T A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A