Information for 11-AGTCGGTT (Motif 29)

C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A T G C A C T G C G T A A G T C A C G T
p-value:1e-5
log p-value:-1.231e+01
Information Content per bp:1.928
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif100.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets97.9 +/- 77.2bp
Average Position of motif in Background102.4 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:AGTCGGTT
TGTCGGTT
C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:forward strand
Alignment:AGTCGGTT-
-GGCVGTTR
C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGTCGGTT--
BRRCVGTTDN
C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGTCGGTT--
TGGCAGTTGG
C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

OVOL2/MA1545.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGTCGGTT-----
GTACCGTTATGTG
C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C G A T G C T A T A G C A T G C A C T G A G C T A C G T T C G A A G C T C A T G G A C T A T C G

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGTCGGTT-----
NNNTGGCAGTTGGTNN
A C G T A C G T A C G T C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

TFCP2/MA0145.3/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGTCGGTT-
AAACCGGTTT
A C G T C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGTCGGTT-----
CACGGCAGTTGGTNN
A C G T A C G T C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

ZKSCAN1/MA1585.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGTCGGTT
ATAGTAGGTG
A C G T A C G T C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

MYB/MA0100.3/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGTCGGTT---
-NNCAGTTGNN
C G T A C T A G A C G T A G T C A T C G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T