Information for 18-TGAGGACTTAAC (Motif 20)

A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T C G T A C G T A A C T G A C G T A G T C A G T C A C G T A G T C C G T A
p-value:1e-4
log p-value:-1.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0112.1_Nkx2-3/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGACTTAAC-
CNTTAAGTACTTAANG
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C A C G T
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G

PH0117.1_Nkx3-1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGAGGACTTAAC--
TACTAAGTACTTAAATG
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T
C G A T C G A T G A T C C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T G A C G T A C G A T A T C G

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGAGGACTTAAC
-AAGCACTTAA-
A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C
A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGAGGACTTAAC---
CATAACCACTTAACAAC
A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0116.1_Nkx2-9/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGAGGACTTAAC--
TTTTAAGTACTTAAATT
A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGAGGACTTAAC
---GCACTTAA-
A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C
A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGAGGACTTAAC-
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAGGACTTAAC
--ACCACTTAA-
A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C
A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

Nkx3-2/MA0122.3/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAGGACTTAAC
ATAACCACTTAAA
A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C
C G T A C G A T C G T A C G T A T G A C G A T C G C T A G T A C G C A T G A C T G C T A C G T A G C T A

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TGAGGACTTAAC---
CTTAACCACTTAAGGAT
A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T