Information for 13-TCCGTGCCAT (Motif 26)

A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G A G T C C G T A A G T C A C T G A C T G C G T A
p-value:1e-4
log p-value:-1.078e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets132.2 +/- 30.6bp
Average Position of motif in Background82.3 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCCGTGCCAT
TTGCGTGCVA-
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCCGTGCCAT
TACGTGCV--
A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCCGTGCCAT
RGTTAGTGCCCY
A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCCGTGCCAT-
--CGTGCCAAG
A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCCGTGCCAT--
---ATGCCAACC
A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCCGTGCCAT--
--GGTGCCAAGT
A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCCGTGCCAT
RTACGTGC---
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TCCGTGCCAT--
----TGCCAGCB
A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCGTGCCAT----
NNNTCCATCCCATAANN
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TCCGTGCCAT
TKCTGTTCCA-
A C G T A C G T A G T C A G T C A C T G A C G T A C T G A G T C A G T C C G T A A C G T
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T