Information for 19-DCAATACAAGAG (Motif 24)

C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T T G A C A C G T C G A T A C T G A G C T C G T A A G C T A C G T A T C G G A T C
p-value:1e-3
log p-value:-8.448e+00
Information Content per bp:1.756
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif18.18%
Number of Background Sequences with motif164.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets130.0 +/- 58.0bp
Average Position of motif in Background92.9 +/- 89.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX15/MA1152.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:DCAATACAAGAG
--AAAACAATAG
C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G
A C G T A C G T C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---DCAATACAAGAG--
CATACAATACGAAATAA
A C G T A C G T A C G T C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---DCAATACAAGAG
ATTTGCATACAATGG
A C G T A C G T A C G T C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0068.1_Sox1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--DCAATACAAGAG--
AATCAATTCAATAATT
A C G T A C G T C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:DCAATACAAGAG-
-AGATGCAATCCC
C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:DCAATACAAGAG-
-BMRVACAAWGGV
C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G A C G T
A C G T A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A

SOX8/MA0868.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:DCAATACAAGAG
--AGAACAATGG
C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G
A C G T A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--DCAATACAAGAG---
TCACGGAACAATAGGTG
A C G T A C G T C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:DCAATACAAGAG
---GAACAATGG
C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G

HOXB13/MA0901.2/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--DCAATACAAGAG
AACCAATAAAATTT
A C G T A C G T C A T G A T G C G T C A C T G A A C G T C T G A A G T C C G T A C G T A A C T G C G T A A C T G
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T