Information for 20-ATTTAAATGA (Motif 34)

C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T
p-value:1e-1
log p-value:-4.554e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif400.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background100.9 +/- 118.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATTTAAATGA
NATTCAAAT--
A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0005.1_Bbx_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATGA----
TAATTCAATGAAGTG
A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATGA-
WATGCAAATGAG
A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ATTTAAATGA-
-GCTAAACGGT
C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

PB0028.1_Hbp1_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATGA-----
ACTATGAATGAATGAT
A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTTAAATGA----
ANNATTTAATTAATTNN
A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

POU5F1B/MA0792.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATGA
TATGCAAAT--
A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTTAAATGA-
AATATGCAAATTAG
A C G T A C G T A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

NKX6-3/MA1530.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATTTAAATGA-
--TTTAATGAN
C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATTTAAATGA-
TATGCWAATBAV
A C G T C G T A A C G T A C G T A C G T C G T A C G T A C G T A A C G T A C T G C G T A A C G T
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G