| p-value: | 1e-9 |
| log p-value: | -2.079e+01 |
| Information Content per bp: | 1.835 |
| Number of Target Sequences with motif | 21.0 |
| Percentage of Target Sequences with motif | 2.55% |
| Number of Background Sequences with motif | 226.3 |
| Percentage of Background Sequences with motif | 0.47% |
| Average Position of motif in Targets | 109.2 +/- 46.0bp |
| Average Position of motif in Background | 102.8 +/- 59.2bp |
| Strand Bias (log2 ratio + to - strand density) | -0.5 |
| Multiplicity (# of sites on avg that occur together) | 1.05 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0029.1_Hic1_1/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GGATGGCCTA-- NGTAGGTTGGCATNNN |
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Gli2(Zf)/GM2-Gli2-ChIP-Chip(GSE112702)/Homer
| Match Rank: | 2 |
| Score: | 0.67 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGATGGCCTA YSTGGGTGGTCT- |
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|
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
| Match Rank: | 3 |
| Score: | 0.66 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | GGATGGCCTA- ---AGGCCTAG |
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|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGATGGCCTA---- NNHYTGACCTAGWTT |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATGGCCTA--- ---TGACCTARTT |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 6 |
| Score: | 0.64 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATGGCCTA--- ---TGACCTARTT |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GGATGGCCTA----- ---TGACCTANTTAN |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GGATGGCCTA--- --NTGACCTAATT |
|
|
|
ZNF449/MA1656.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGATGGCCTA-- NNGGTTGGGCTTNN |
|
|
|
Hic1/MA0739.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGATGGCCTA GGTTGGCAT- |
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