| p-value: | 1e-4 |
| log p-value: | -1.149e+01 |
| Information Content per bp: | 1.839 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 116.1 |
| Percentage of Background Sequences with motif | 0.08% |
| Average Position of motif in Targets | 139.3 +/- 66.8bp |
| Average Position of motif in Background | 87.2 +/- 66.4bp |
| Strand Bias (log2 ratio + to - strand density) | -1.0 |
| Multiplicity (# of sites on avg that occur together) | 1.50 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 1 |
| Score: | 0.77 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ATTTGTCAHGCT NNAATTAGTCACGGT |
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Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | ATTTGTCAHGCT ARNTGACA---- |
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MEIS1/MA0498.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | ATTTGTCAHGCT --NTGTCAN--- |
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Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATTTGTCAHGCT --YTGWCADY-- |
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Pax2/MA0067.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | ATTTGTCAHGCT ---AGTCACGC- |
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|
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MEIS3/MA0775.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATTTGTCAHGCT --TTGACAGG-- |
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BACH2/MA1101.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----ATTTGTCAHGCT-- NAANGATGAGTCATGNTTN |
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PAX5/MA0014.3/Jaspar
| Match Rank: | 8 |
| Score: | 0.62 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | ATTTGTCAHGCT- -NNGGTCACGCTC |
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PB0147.1_Max_2/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATTTGTCAHGCT---- --GTGCCACGCGACTG |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ATTTGTCAHGCT --TTGCCAAG-- |
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