| p-value: | 1e-4 |
| log p-value: | -1.079e+01 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 25.00% |
| Number of Background Sequences with motif | 0.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 24.0 +/- 0.0bp |
| Average Position of motif in Background | 0.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TGTGACAAATTA- ACCGTGACTAATTNN |
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PH0132.1_Pax6/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA------ --TGATTAATTAATTGAC |
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|
PH0107.1_Msx2/Jaspar
| Match Rank: | 3 |
| Score: | 0.65 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA----- GAAGACCAATTAGCGCT |
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|
|
NOTO/MA0710.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA-- ----GCTAATTAGC |
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|
|
Nobox/MA0125.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.64 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | TGTGACAAATTA ----ACCAATTA |
|
|
|
PAX4/MA0068.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA- -----CTAATTAG |
|
|
|
GBX1/MA0889.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA-- ----ACTAATTAGC |
|
|
|
Dlx1/MA0879.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA-- ----CCTAATTATC |
|
|
|
PRRX2/MA0075.3/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA- -----CTAATTAA |
|
|
|
LHX9/MA0701.2/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | TGTGACAAATTA- -----CTAATTAA |
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