Information for 10-GATCCATAGC (Motif 30)

A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T C G T A A C G T A C T G A C T G C G T A A C G T A G T C
p-value:1e-3
log p-value:-8.258e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets129.0 +/- 0.0bp
Average Position of motif in Background94.4 +/- 51.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GATCCATAGC
DGATCRATAN-
A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GATCCATAGC
RRTCAATA--
A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATCCATAGC
TAATCGATAA-
A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A A C G T

CUX1(Homeobox)/K562-CUX1-ChIP-Seq(GSE92882)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATCCATAGC
NTNATCGATA--
A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
G C A T A G C T C A G T T C G A A G C T G A T C C T A G T C G A A C G T T G C A A C G T A C G T

CUX2/MA0755.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GATCCATAGC
TAATCGATAA-
A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GATCCATAGC
HNRAATCAAT---
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GATCCATAGC----------
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

RFX3/MA0798.2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATCCATAGC-----
-TNCCATAGCAACNN
A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

RFX1/MA0509.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GATCCATAGC-----
-TNCCATAGCAACNN
A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATCCATAGC
ATAATCCC----
A C G T A C G T A C T G C G T A A C G T A G T C A G T C C G T A A C G T C G T A A C T G A G T C
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T