Information for 5-GGTGACTTTCCC (Motif 8)

A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C G T A G T C C G T A A G T C A G T C
p-value:1e-4
log p-value:-9.805e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GGTGACTTTCCC
-GGGAATTTCC-
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTGACTTTCCC
-GGGAATTTCC-
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:GGTGACTTTCCC----
----ACTTTCACTTTC
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTGACTTTCCC
-TTGACTTTT--
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGTGACTTTCCC
-GGGGATTTCC-
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GGTGACTTTCCC
-GGGGATTTCC-
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGTGACTTTCCC
-GTGACCTT---
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTGACTTTCCC
NGGGGATTTCCC
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

PRDM1/MA0508.3/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTGACTTTCCC--
---TTCTTTCTCTT
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

RBPJ/MA1116.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GGTGACTTTCCC---
-----NNTTCCCANN
A C T G A C T G A C G T A C T G C G T A A G T C A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G