Information for 5-GVGTGTAGTTRT (Motif 5)

A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T
Reverse Opposite:
C G T A A G C T G T C A G C T A T A G C C G A T G T C A A G T C C G T A A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.301e+01
Information Content per bp:1.648
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif2080.6
Percentage of Background Sequences with motif2.50%
Average Position of motif in Targets77.3 +/- 45.1bp
Average Position of motif in Background98.6 +/- 85.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GVGTGTAGTTRT-----
--GTNTTGTTGTGANNT
A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GVGTGTAGTTRT---
NNNTGTTGTTGTTNG
A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T A C G T A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

PB0198.1_Zfp128_2/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GVGTGTAGTTRT---
-TGTATATATATACC
A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G A C T C G T A T G A C A T G C

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GVGTGTAGTTRT-----
NNNGGTAATTATNGNGN
A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GVGTGTAGTTRT-----
GTCGGTAATTATNGNGN
A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PB0172.1_Sox1_2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GVGTGTAGTTRT-----
--CTATAATTGTTAGCG
A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GVGTGTAGTTRT
GGGAATTGTAGT
A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GVGTGTAGTTRT
TGCGTG-------
A C G T A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GVGTGTAGTTRT
TGGGTGTGGCN--
A C G T A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GVGTGTAGTTRT
NTGGGTGTGGCC--
A C G T A C G T A C T G T A C G T A C G C G A T T A C G A C G T G C T A A C T G C A G T A C G T C T G A C G A T
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T A C G T