Information for 12-TAGGGTTGCC (Motif 31)

A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C C G T A C G T A A G T C A G T C A G T C A C G T C G T A
p-value:1e-3
log p-value:-8.258e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets82.0 +/- 0.0bp
Average Position of motif in Background142.1 +/- 64.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TAGGGTTGCC--
---CGTTGCTAT
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T

RFX1/MA0509.2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TAGGGTTGCC------
--CTGTTGCTATGGCA
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C A G T C T A G A G C T G A C T C T A G G A T C A G C T C T G A C A G T C T A G T C A G G T A C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TAGGGTTGCC----
--CTGTTGCTAGGS
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TAGGGTTGCC------
-NNCGTTGCTATGGNN
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

RFX3/MA0798.2/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TAGGGTTGCC------
--CGGTTGCTATGGCA
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A C T G C T A G A G C T G A C T C T A G G A T C G A C T T C G A C A G T C T A G T C A G G T A C C T G A

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TAGGGTTGCC---
CAAAGGCGTGGCCAG
A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TAGGGTTGCC-------
---NGTTGCCATGGCAA
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAGGGTTGCC--
-AGGGTAACAGC
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TAGGGTTGCC-------
---GGTTGCCATGGCAA
A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------TAGGGTTGCC
GGCACCCAGGGGTGC-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C T G A C G T A C G T A C T G A G T C A G T C
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T