Information for 13-CCGTCACCGT (Motif 33)

A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A C T G A C G T A C T G C G T A A G T C A C T G A C T G
p-value:1e-3
log p-value:-7.595e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 0.0bp
Average Position of motif in Background153.3 +/- 43.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1/MA0604.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCGTCACCGT
TACGTCAT---
A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCGTCACCGT
ACGTCA----
A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGTCACCGT
GTGACGTCACCG-
A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CCGTCACCGT
NCGATGACGTCATCGN
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

CREB3L4(var.2)/MA1475.1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCGTCACCGT
GGTGACGTCACC--
A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
A T C G T C A G G A C T A T C G T C G A A G T C T C A G G A C T T A G C T C G A A G T C G T A C A C G T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCGTCACCGT
GTGCCACGTCATCA-
A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCGTCACCGT------
--GTCACGCTCNCTGA
A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGTCACCGT
-AGTCACGC-
A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T

PAX5/MA0014.3/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGTCACCGT
GAGCGTGACCCC
A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CCGTCACCGT
CCGATGACGTCATCGT
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C G T
A T G C A T G C A C T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T G T A C T C A G G A C T