Information for 1-GGYTCGTCGM (Motif 4)

A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
Reverse Opposite:
A C T G A G T C C T A G C G T A A G T C C T A G C G T A C T A G A G T C A G T C
p-value:1e-5
log p-value:-1.283e+01
Information Content per bp:1.802
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif219.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets133.7 +/- 15.3bp
Average Position of motif in Background100.7 +/- 72.9bp
Strand Bias (log2 ratio + to - strand density)-10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGYTCGTCGM
NGGATTAN---
A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGYTCGTCGM
NGCTN-----
A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

NR1H4::RXRA/MA1146.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGYTCGTCGM----
GAGGTCATTGACCTT
A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C A C G T A C G T A C G T A C G T
T C A G T C G A C T A G C A T G A C G T A G T C C T G A G C A T A G C T T C A G T G C A G T A C G T A C A G C T A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGYTCGTCGM
NRRGGGTCTT---
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGYTCGTCGM
CGGCTGTTCC-
A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
G A T C T C A G T A C G T A G C G C A T T A C G C A G T A C G T T G A C G A T C A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGYTCGTCGM
NAGGTCATTGA
A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGYTCGTCGM
GAGGTCAT---
A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGYTCGTCGM--
GARTGGTCATCGCCC
A C G T A C G T A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C A C G T A C G T
T A C G C G T A T C A G G A C T C T A G A C T G C A G T T A G C T C G A A C G T G T A C C T A G A G T C A G T C G A T C

HOXD13/MA0909.2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGYTCGTCGM-
GTTTTATTGGG
A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C A C G T
A C T G A C G T A C G T A G C T A C G T C G T A A G C T A C G T A C T G A T C G A T C G

ZNF341/MA1655.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGYTCGTCGM
NNGGCTGTTCCN
A C G T A C G T A C T G A C T G A G T C A C G T A G T C C T A G A C G T A G T C C T A G G T A C
A T C G A G C T C A T G T A C G T A G C A G C T T A C G G A C T A C G T A T G C G A T C G T A C