| p-value: | 1e-3 |
| log p-value: | -7.043e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 12.50% |
| Number of Background Sequences with motif | 15.2 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 196.0 +/- 0.0bp |
| Average Position of motif in Background | 83.8 +/- 46.6bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 1 |
| Score: | 0.73 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GCATAATCAT GHATATKCAT |
|
|
|
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GCATAATCAT GAATATTCAT |
|
|
|
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 3 |
| Score: | 0.70 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GCATAATCAT--- ATGAATATTCATGAG |
|
|
|
EVX1/MA0887.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GCATAATCAT- -GNTAATTANN |
|
|
|
EVX2/MA0888.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.65 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GCATAATCAT- -NNTAATTANN |
|
|
|
HLF/MA0043.3/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GCATAATCAT NNGTTGCATAACNN- |
|
|
|
PH0148.1_Pou3f3/Jaspar
| Match Rank: | 7 |
| Score: | 0.64 |
| Offset: | -7 |
| Orientation: | forward strand |
| Alignment: | -------GCATAATCAT AAAATATGCATAATAAA |
|
|
|
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | GCATAATCAT --YTAATCCY |
|
|
|
NFIL3/MA0025.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----GCATAATCAT NNATTGCATAANN-- |
|
|
|
Dux/MA0611.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | GCATAATCAT --CCAATCAA |
|
|
|