Information for 3-GAAGCTTCACCT (Motif 5)

A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T
Reverse Opposite:
C G T A A C T G A C T G A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C
p-value:1e-4
log p-value:-9.768e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GAAGCTTCACCT
CAAGCTT-----
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GAAGCTTCACCT----
NNGGCGACACCTCNNN
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAGCTTCACCT
NGAAGC-------
A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SNAI3/MA1559.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GAAGCTTCACCT---
-----TGCACCTGTT
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G G A T C T G C A A T G C G A T C G A C T C T A G G A C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAAGCTTCACCT---
-----NNCACCTGNN
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

ZEB1/MA0103.3/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAAGCTTCACCT----
-----CCCACCTGCGC
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAAGCTTCACCT---
-----TRCACCTGCY
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAGCTTCACCT-
-GAGCGTGACCCC
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

HSF4/MA0771.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GAAGCTTCACCT
TTCTAGAACGTTC----
A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GAAGCTTCACCT--
----RYHYACCTGB
A C T G C G T A C G T A A C T G A G T C A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T