Information for 2-TGTCAATTTCCC (Motif 3)

A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G G T C A C G T A C G T A A G C T A C G T A C T G C G T A A G T C C G T A
p-value:1e-17
log p-value:-4.004e+01
Information Content per bp:1.926
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets125.6 +/- 41.3bp
Average Position of motif in Background88.8 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGTCAATTTCCC
NTGTCAN------
A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATTTCCC
CCTGTCAA------
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTCAATTTCCC
TGTCANYT----
A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TGTCAATTTCCC
NNNCAGCTGTCAATATN--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATTTCCC
GCTGTCAA------
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------TGTCAATTTCCC
AAGCACCTGTCAATAT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTCAATTTCCC
AGTTTCAGTTTC--
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATTTCCC
ACTTTCACTTTC--
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TGTCAATTTCCC
RHTGWCAR------
A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGTCAATTTCCC
TCAGTTTCATTTTCC-
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A C T G A A C G T C G A T A C G T A G T C A G T C A G T C
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T