Information for 13-GTATCCAATG (Motif 36)

A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C G T A C T G A C T G C G T A A C G T C G T A A G T C
p-value:1e-3
log p-value:-7.572e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets104.0 +/- 0.0bp
Average Position of motif in Background111.7 +/- 90.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GTATCCAATG-
ACTAGCCAATCA
A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GTATCCAATG--
NTNNCGTATCCAAGTNN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------GTATCCAATG------
NNTNGNNGTAACCAAGNNNNAGN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTATCCAATG--
--AGCCAATCGG
A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

DMRT3/MA0610.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GTATCCAATG
AATGTATCAAT--
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GTATCCAATG
AATGTATCAATT-
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G
G T C A C G T A G C A T A T C G C A G T C G T A C A G T A T G C T G C A C G T A G C A T C G A T A C G T

NFYB/MA0502.2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTATCCAATG--
NTGGCCAATGAG
A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A G T C A C G T C T A G T C A G G A T C G T A C G T C A T C G A C G A T T A C G T C G A T A C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTATCCAATG------
NNTNNACAATGGGANNN
A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GTATCCAATG-
ATTTGCATACAATGG
A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTATCCAATG--
NNNGTAACTANGNNA
A C G T A C G T A C G T A C T G A C G T C G T A A C G T A G T C A G T C C G T A C G T A A C G T A C T G A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A