Information for 18-AGACGAGACT (Motif 29)

C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C A C G T A G T C A C T G A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.267e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif5.88%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets20.0 +/- 0.0bp
Average Position of motif in Background98.2 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGACGAGACT--------
-TACGAGACTCCTCTAAC
C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGACGAGACT---
TTGACCGAGAATTCC
A C G T A C G T C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGACGAGACT--
CAAAATCGAAACTAA
A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

IRF6/MA1509.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGACGAGACT
-ACCGAAACT
C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T
A C G T T C G A G A T C A T G C C T A G C G T A C G T A C T G A A T G C G A C T

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGACGAGACT---
GNNACCGAGAATNNN
A C G T A C G T C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

SMAD5/MA1557.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGACGAGACT
TGTCTAGACA
C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGACGAGACT
CCAGACRSVB--
A C G T A C G T C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGACGAGACT--
ATAAACCGAAACCAA
A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGACGAGACT-
---CCAGACAG
C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AGACGAGACT-----
CTGATCGAAACCAAAGT
A C G T A C G T C G T A A C T G C G T A A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T