Information for 10-TCCTGCTGATGT (Motif 15)

A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A C G T A G T C C G T A A C T G A G T C C G T A A C T G A C T G C G T A
p-value:1e-3
log p-value:-7.813e+00
Information Content per bp:1.921
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets94.8 +/- 36.5bp
Average Position of motif in Background117.7 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TCCTGCTGATGT
NNCCTGCTGNG--
A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
A G T C A T G C T G A C T A G C A G C T T C A G A T G C A C G T T C A G A G C T A T C G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTGATGT
CCCCCTGCTGTG--
A C G T A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCCTGCTGATGT
-CCTGCTGAGH-
A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

Zic2/MA1629.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTGATGT
CCCCCTGCTGTGNN
A C G T A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
A G T C A G T C G A T C T A G C G T A C G A C T T C A G A T G C C A G T A T C G C G A T A C T G G T C A A C T G

Zic2(Zf)/ESC-Zic2-ChIP-Seq(SRP197560)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTGATGT
CCYCCYGCTGDG--
A C G T A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
A G T C A T G C G A T C A G T C G T A C G A C T C T A G A G T C C G A T A C T G C A G T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCTGCTGATGT
GGCCYCCTGCTGDGH-
A C G T A C G T A C G T A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTGATGT-
TNTCCTGCTGTGNNG
A C G T A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

NRL/MA0842.2/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCCTGCTGATGT
AAAAGTGCTGACG-
A C G T A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
C T G A C G T A C G T A G C T A C T A G G A C T C T A G T G A C A G C T C A T G C T G A A G T C C T A G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCTGCTGATGT-
NNTCCTGCTGTGNNN
A C G T A C G T A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TCCTGCTGATGT
-HCAGCTGDTN-
A C G T G T A C A G T C A C G T A C T G A G T C A C G T A C T G G T C A A C G T A C T G A G C T
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T