Information for 4-AAGGAGAGAGCC (Motif 9)

C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C G T A G T C A C G T A G T C A C G T A G T C A G T C A C G T A C G T
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGGAGAGAGCC--
-AGGTGNCAGACAG
C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PRDM1/MA0508.3/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAGGAGAGAGCC
-NAGAGAAAGNA
C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGGAGAGAGCC-
-AGGTGHCAGACA
C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C A C G T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

TBX15/MA0803.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGGAGAGAGCC
-AGGTGTGA---
C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AAGGAGAGAGCC
GAAAGTGAAAGT-
A C G T C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AAGGAGAGAGCC
AAGGTGTGAA--
C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGGAGAGAGCC
-AGGTGTGA---
C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:AAGGAGAGAGCC
-------CAGCC
C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAGGAGAGAGCC
TTGACCGAGAATTCC
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAGGAGAGAGCC
NNNACCGAGAGTNNN
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G A G T C A G T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T