Information for 5-GKYWAAMRGSYC (Motif 5)

A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C
Reverse Opposite:
A C T G C T A G A T C G A G T C G A C T A C T G A C G T A C G T C G T A C T A G G T C A A G T C
p-value:1e-6
log p-value:-1.447e+01
Information Content per bp:1.782
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif135.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets70.7 +/- 1.7bp
Average Position of motif in Background113.9 +/- 76.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYBL2/MA0777.1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GKYWAAMRGSYC
GACNGTTTAACGGTT-
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C
C T A G C T G A T A G C T A G C A C T G C G A T A C G T G C A T C T G A G T C A G A T C A T C G A C T G G A C T G A C T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GKYWAAMRGSYC--
AAGGTCAAAAGGTCAA
A C G T A C G T A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C A C G T A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GKYWAAMRGSYC
--NHAACBGYYV
A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C
A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GKYWAAMRGSYC-
GAGGTCAAAAGGTCA
A C G T A C G T A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C A C G T
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Rarb/MA0857.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GKYWAAMRGSYC-
AAAGGTCAAAAGGTCA
A C G T A C G T A C G T A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C A C G T
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GKYWAAMRGSYC
---YAACBGCC-
A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C
A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T

RARA/MA0729.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GKYWAAMRGSYC----
GAGGTCAAAAGGTCAATG
A C G T A C G T A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GKYWAAMRGSYC-----
-TCTCAAAGGTCACGAG
A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

OVOL2/MA1545.1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GKYWAAMRGSYC
NNNNTAACGGTNN
A C G T A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C
T A G C C T G A G T A C T C G A A G C T G T C A C T G A A G T C A T C G A T C G C G A T G C T A G A T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GKYWAAMRGSYC
--CCAACTGCCA
A C T G A C G T A G T C C G A T C G T A C G T A G T A C C T A G A C T G A T G C A G T C A G T C
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A