Information for 8-ATCCCTCACK (Motif 14)

C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
Reverse Opposite:
G T A C A C T G C G A T A C T G C G T A A C T G A C T G C T A G C T G A C G A T
p-value:1e-3
log p-value:-8.489e+00
Information Content per bp:1.788
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif54.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets112.6 +/- 45.5bp
Average Position of motif in Background94.3 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--ATCCCTCACK
YCATCMATCA--
A C G T A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
G A T C G T A C C T G A A C G T G A T C G T C A C T G A A C G T G A T C G C T A A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATCCCTCACK
GYCATCMATCAT-
A C G T A C G T A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

MSANTD3/MA1523.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ATCCCTCACK
GTACACTCAC-
A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATCCCTCACK---
NNAGTCCCACTCNNNN
A C G T A C G T A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G A C G T A C G T A C G T
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

NKX2-5/MA0063.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCCCTCACK-
ACCACTCAAAA
C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G A C G T
T C G A T G A C G A T C C T G A G A T C G C A T G A T C C G T A G C T A T C G A G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ATCCCTCACK
AGCCACTCAAG
A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Znf281/MA1630.1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCCCTCACK
CCTCCCCCACC
A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
A G T C G T A C C A G T T G A C T A G C A T G C A T G C A T G C T C G A A T G C G A T C

NKX2-2/MA1645.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCCCTCACK--
TAACCACTCAAGAA
A C G T A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G A C G T A C G T
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

PH0137.1_Pitx1/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ATCCCTCACK
NTTGTTAATCCCTCTNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

ZNF75D/MA1601.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATCCCTCACK
TTTCCCACAN-
A C G T C G T A A G C T A G T C G T A C A G T C A C G T A G T C C G T A G T A C C A T G
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T A C G T