Information for 14-CTCAGCTCACTA (Motif 27)

A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G C G A T A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G
p-value:1e-3
log p-value:-9.004e+00
Information Content per bp:1.974
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets110.1 +/- 57.2bp
Average Position of motif in Background128.7 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTCAGCTCACTA-
---AGCTCATTAT
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C G T
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCAGCTCACTA-----
NNNACCTCATTATCNTN
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTCAGCTCACTA
ATCACCCCAC--
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCAGCTCACTA-
---NNCTCATTAT
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C G T
A C G T A C G T A C G T G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTCAGCTCACTA-----
GCAACCTCATTATNNNN
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCTCACTA
GCTCCGCCCMCY-
A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CTCAGCTCACTA---
---AGGTCTCTAACC
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCAGCTCACTA
ATCACCCCAT--
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCAGCTCACTA
-HCAGCTGDTN-
A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A
A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T

SIX1/MA1118.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCAGCTCACTA
TATCAGGTTAC--
A C G T A G T C A C G T A G T C C G T A A C T G A G T C A C G T A G T C C G T A A G T C A C G T C G T A
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T A C G T