Information for 4-TAGAACAACACC (Motif 4)

A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G A C G T C T A G C G A T A C G T A C T G A G C T A C G T G T A C C G A T C T G A
p-value:1e-17
log p-value:-4.032e+01
Information Content per bp:1.831
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets100.8 +/- 46.4bp
Average Position of motif in Background102.4 +/- 53.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TAGAACAACACC
ATATCAAAACAAAACA
A C G T A C G T A C G T A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0122.1_Foxk1_2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAGAACAACACC-
CAAACAACAACACCT
A C G T A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

SOX8/MA0868.2/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAGAACAACACC
-AGAACAATGG-
A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C
A C G T T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAGAACAACACC--
ATGTCACAACAACAC
A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

SOX12/MA1561.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TAGAACAACACC
ACCGAACAATG--
A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C
G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TAGAACAACACC
NTTNAGAACAATTA-
A C G T A C G T A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAGAACAACACC--
TTTAGAACAATAAAAT
A C G T A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAGAACAACACC--
TTAAGAACAATAAATT
A C G T A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0183.1_Sry_2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TAGAACAACACC--
TCACGGAACAATAGGTG
A C G T A C G T A C G T A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SOX15/MA1152.1/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAGAACAACACC
-AAAACAATAG-
A G C T G C T A A C T G C G T A C T G A G T A C C G T A C G T A A G T C C G T A G T A C A G T C
A C G T C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T