Information for 1-GRTGTTGARTKW (Motif 1)

A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T
Reverse Opposite:
C G T A G T A C C G T A A G C T A C G T A G T C C G T A C G T A A G T C C G T A A G C T A G T C
p-value:1e-12
log p-value:-2.844e+01
Information Content per bp:1.868
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif6.15%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets107.2 +/- 44.3bp
Average Position of motif in Background108.1 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-5/MA0063.2/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:GRTGTTGARTKW-
--NNTTGAGTGNN
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T A C G T
A C G T A C G T C G A T A G C T C G A T G C A T C T A G C G T A C T A G G A C T C T A G A C T G A G C T

FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GRTGTTGARTKW--
--TGTTTAYTTAGC
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T A C G T A C G T
A C G T A C G T C G A T C T A G A C G T A C G T A C G T C G T A A G C T C G A T A G C T C G T A C T A G T A G C

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GRTGTTGARTKW-
--TGTGGATTNNN
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

NKX2-2/MA1645.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GRTGTTGARTKW---
-NNNTTGAGTGGNNN
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T A C G T A C G T A C G T
A C G T C G A T C G A T A G T C A G C T C A G T T A C G C G T A C A T G C G A T C T A G A C T G G C A T C G A T C T G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GRTGTTGARTKW
NNTGTGGATTSS
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GRTGTTGARTKW
--TGTTTACTTT
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T
A C G T A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GRTGTTGARTKW
CNTGTTTACATA
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GRTGTTGARTKW--
BSNTGTTTACWYWGN
A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T A C G T A C G T
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GRTGTTGARTKW
--TGTTTATTT-
A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T
A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GRTGTTGARTKW
GCGGAGGTGTCGCCTC-
A C G T A C G T A C G T A C G T A C G T A C T G C T G A A C G T A C T G C G A T A C G T A C T G G T C A C T G A A C G T C A T G C G A T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T