| p-value: | 1e-3 |
| log p-value: | -8.386e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 6.67% |
| Number of Background Sequences with motif | 1.8 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 87.0 +/- 0.0bp |
| Average Position of motif in Background | 87.8 +/- 27.6bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer
| Match Rank: | 1 |
| Score: | 0.75 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CTTGTCACGA--- -NHRTCACGACDN |
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MEIS3/MA0775.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTGTCACGA CCTGTCAA-- |
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NFIC/MA0161.2/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTTGTCACGA TACTTGGCAGA- |
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MEIS1/MA0498.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTTGTCACGA -NTGTCAN-- |
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Pax2/MA0067.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | CTTGTCACGA --AGTCACGC |
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|
|
ZBED1/MA0749.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.63 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTGTCACGA--- TATGTCGCGATAG |
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|
NFIA/MA0670.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.63 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -CTTGTCACGA NNTTGGCANN- |
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|
|
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer
| Match Rank: | 8 |
| Score: | 0.63 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | CTTGTCACGA -YTGWCADY- |
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|
TFEC/MA0871.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | reverse strand |
| Alignment: | CTTGTCACGA--- --NGTCACGTGNN |
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|
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTGTCACGA CTTGGCAA-- |
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