| p-value: | 1e-3 |
| log p-value: | -8.226e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 16.67% |
| Number of Background Sequences with motif | 10.4 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 64.0 +/- 0.0bp |
| Average Position of motif in Background | 60.6 +/- 92.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PB0161.1_Rxra_2/Jaspar
| Match Rank: | 1 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACCTAGGTTG---- TCGCGAAGGTTGTACT |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 2 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACCTAGGTTG TGACCTARTT-- |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 3 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACCTAGGTTG TGACCTARTT-- |
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|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ACCTAGGTTG- TTGACCTANTTATN |
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|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ACCTAGGTTG BTGACCTAVTTW- |
|
|
|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -6 |
| Orientation: | reverse strand |
| Alignment: | ------ACCTAGGTTG NNHYTGACCTAGWTT- |
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|
|
PB0181.1_Spdef_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.58 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ACCTAGGTTG----- CTACTAGGATGTNNTN |
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|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --ACCTAGGTTG TGACCTANTTAN |
|
|
|
Znf423/MA0116.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.56 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ACCTAGGTTG- GCACCCCTGGGTGCC |
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|
|
NEUROG2/MA0669.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.55 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -ACCTAGGTTG GACATATGTT- |
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