Information for 23-TTCATAGTCTCT (Motif 34)

A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G C G T A A G T C A C G T C G T A A C G T A C T G C G T A C G T A
p-value:1e-3
log p-value:-7.836e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background127.9 +/- 13.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTCATAGTCTCT
TTTCATKGCC---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
G C A T A C G T C G A T A G T C G T C A A G C T C A G T C T A G A T G C G A T C A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCATAGTCTCT
CTCATTGTC---
A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTCATAGTCTCT
TTTNATTGCY---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A C G T C G A T A C G T G T C A A C G T C A G T C T A G A T G C G A T C A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTCATAGTCTCT
-CCATTGTTTT-
A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCATAGTCTCT
TTTCATTRCC---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTCATAGTCTCT--
ANTCCTTTGTCTNNNN
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

TCF7/MA0769.2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TTCATAGTCTCT
ANATCAAAGNN---
A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A A C G T A C G T A C G T

Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TTCATAGTCTCT
TTTTATGGCM---
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
C A G T C G A T G C A T G C A T G T C A A G C T C A T G C T A G A T G C G T A C A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTCATAGTCTCT
NNCCATTGTNN--
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TTCATAGTCTCT
NNCCATTGTNN--
A C G T A C G T A C G T A G T C C G T A A C G T C G T A A C T G A C G T A G T C A C G T A G T C A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T