Information for 2-ATCGGATGCA (Motif 2)

C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A C G T A G T C A G T C A C T G C G T A A C G T
p-value:1e-4
log p-value:-1.060e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets115.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----ATCGGATGCA---
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

ETS2/MA1484.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATCGGATGCA
GACCGGAAGT-
A C G T C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A
C T A G C T G A T A G C G T A C C T A G T A C G T G C A G C T A C T A G A G C T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCGGATGCA
ACCCGGATGTA
A C G T C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATCGGATGCA-
AANNATCCGGATGTNN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T
T C G A C T G A C T G A C G T A C G T A G A C T T A G C T G A C A C T G A C T G C G T A G C A T T C A G G A C T C T G A A G T C

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCGGATGCA---
CCATTGTATGCAAAT
A C G T A C G T C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.60
Offset:2
Orientation:forward strand
Alignment:ATCGGATGCA--
--MTGATGCAAT
C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

FEV/MA0156.2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATCGGATGCA
ACCGGAAGTG
C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A
C G T A T G A C T G A C C T A G C A T G G C T A G C T A T C A G A G C T C T A G

ETS1/MA0098.3/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATCGGATGCA
ACCGGAAGTG
C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A
C T G A T A G C T G A C A T C G A C T G C G T A C G T A T C A G A G C T T C A G

ETV3/MA0763.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATCGGATGCA
ACCGGAAGTG
C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A
T C G A G A T C G A T C A C T G A C T G G T C A C G T A T C A G A G C T T C A G

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATCGGATGCA--
--ATGATGCAAT
C G T A A C G T A G T C A C T G A C T G C G T A A C G T A C T G A G T C C G T A A C G T A C G T
A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T