Information for 1-MCCYCASTTYYA (Motif 1)

G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
Reverse Opposite:
A C G T C T G A C T G A C G T A C G T A A T G C A C G T A C T G C T G A A C T G A C T G A C G T
p-value:1e-10
log p-value:-2.476e+01
Information Content per bp:1.837
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif94.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets122.4 +/- 60.8bp
Average Position of motif in Background93.6 +/- 66.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0201.1_Zfp281_2/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------MCCYCASTTYYA
AGGAGACCCCCAATTTG-
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---MCCYCASTTYYA
AAAACCTCAAAT---
A C G T A C G T A C G T G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
C G T A G C T A T C G A C T G A G A T C T G A C C G A T T G A C G C T A C T G A G C T A G A C T A C G T A C G T A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MCCYCASTTYYA--
NNCTCACCTCCTNN
G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A A C G T A C G T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C

VEZF1/MA1578.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-MCCYCASTTYYA
CCCCCCACTT---
A C G T G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
T A G C G T A C G T A C G T A C G T A C G T A C G T C A A G T C C G A T G C A T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:MCCYCASTTYYA
---TCAGTCTT-
G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:MCCYCASTTYYA
--ACCACTTGAA
G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---MCCYCASTTYYA
NWAACCACADNN---
A C G T A C G T A C G T G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--MCCYCASTTYYA
KGGCCYCWTD----
A C G T A C G T G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A A C G T A C G T A C G T A C G T

Znf281/MA1630.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---MCCYCASTTYYA
CCTCCCCCACC----
A C G T A C G T A C G T G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
A G T C G T A C C A G T T G A C T A G C A T G C A T G C A T G C T C G A A T G C G A T C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---MCCYCASTTYYA
NAAACCACAG-----
A C G T A C G T A C G T G T C A A G T C A G T C A G C T A G T C C G T A A T C G A C G T A C G T A G C T A G C T G T C A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T