Information for 20-AAATCATAATGG (Motif 29)

C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T
p-value:1e-3
log p-value:-8.381e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets98.0 +/- 0.0bp
Average Position of motif in Background185.4 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AAATCATAATGG--
TATAATTATAATATTC
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAATCATAATGG--
NNTAATTATAATNANN
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AAATCATAATGG--
GCTAATTATAATTATC
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

Isl1/MA1608.1/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AAATCATAATGG--
---NNCTAATGGNN
C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T C A G G A T C C G A T C T G A C G T A G A C T C A T G C T A G T G C A G A C T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------AAATCATAATGG
AAGGCGAAATCATCGCA-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T

BARX1/MA0875.1/Jaspar

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAATCATAATGG-
-----NTAATTGN
C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAATCATAATGG--
TAAGATTATAATACGG
A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T A C G T
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

NKX6-3/MA1530.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAATCATAATGG-
----TTTAATGAN
C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G

PBX2/MA1113.2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AAATCATAATGG
GTCATAAATCATT----
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G
T C A G G A C T G T A C C T G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G A C T G C A T A C G T A C G T A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:10
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AAATCATAATGG
NNCCATAAATCATNN---
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C T G
C T G A T C A G G A T C G T A C T C G A A G C T G T C A G C T A G C T A G C A T G A T C G C T A G C A T G C A T G A C T A C G T A C G T A C G T