Information for 15-TCACCTACCTAY (Motif 27)

C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
Reverse Opposite:
C T G A A G C T C G T A A C T G A C T G A C G T C G T A A C T G A C T G A C G T A C T G C G T A
p-value:1e-4
log p-value:-9.921e+00
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif12.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets103.5 +/- 47.1bp
Average Position of motif in Background62.8 +/- 58.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTACCTAY-
TTGACCTANTTATN
A C G T C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCACCTACCTAY
NNACTTACCTN-
C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

RORC/MA1151.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TCACCTACCTAY
TGACCTANTTAN
C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCACCTACCTAY
CGCACCTGCCG--
A C G T C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G A C G T A C G T

ZKSCAN5/MA1652.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCACCTACCTAY
NNCTCACCTCCTNN-
A C G T A C G T A C G T C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
A G C T A G C T G T A C A G C T A G T C T C G A G A T C A G T C A C G T A G T C G A T C G A C T A G T C G A T C A C G T

TCF3/MA0522.3/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCACCTACCTAY
CGCACCTGCCC--
A C G T C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C A C G T A C G T

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCACCTACCTAY
CAGCACCTGCCCC-
A C G T A C G T C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACCTACCTAY
TGACCTARTT--
C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCACCTACCTAY
TGACCTARTT--
C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T

RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TCACCTACCTAY
BTGACCTAVTTW-
A C G T C G A T A G T C C G T A A G T C A G T C A C G T C G T A A G T C G T A C A C G T C T G A G A C T
A G T C A C G T T C A G T C G A A G T C A G T C A G C T C T G A T C A G C G A T G C A T G C A T A C G T