Information for 6-CCAACGTGGG (Motif 19)

A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A G T C A C T G A C G T A C G T A C T G A C T G
p-value:1e-3
log p-value:-8.574e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background123.5 +/- 65.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYCN/MA0104.4/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCAACGTGGG-
GGCCACGTGGCC
A C G T A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T
T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCAACGTGGG
NNCCACGTGG-
A C G T A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCAACGTGGG
--CACGTG--
A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G
A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCAACGTGGG-
-CCACGTGGNN
A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T
A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCAACGTGGG
--CACGTGGN
A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G
A C G T A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCAACGTGGG
-GGACGTGC-
A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G
A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T

MYC/MA0147.3/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCAACGTGGG-
NNGCACGTGGNN
A C G T A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T
T A C G T C A G T A C G T A G C T C G A A G T C T C A G G A C T A C T G A T C G A T G C A T G C

GLIS1/MA0735.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAACGTGGG------
GCTTCGTGGGGGGTCT
A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T A C G G T A C C G A T G C A T G T A C A C T G G A C T A C T G C T A G A T C G A T C G C A T G A T C G G C A T T G A C C A G T

PB0043.1_Max_1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAACGTGGG----
TGACCACGTGGTCGGG
A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
C A G T C A T G T G C A T A G C G T A C C T G A A G T C T C A G G A C T A C T G A T C G A C G T A T G C T C A G C A T G C A T G

GLI2/MA0734.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCAACGTGGG------
-CGNCGTGGGTGGTCN
A G T C A G T C C G T A C G T A A G T C A C T G A C G T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A G C C T A G G C T A A T G C C A T G G A C T C A T G A C T G A C T G C A G T C T A G C T A G A C G T T G A C A C G T