Information for 3-AGKATTGWTGGG (Motif 3)

C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
Reverse Opposite:
G T A C A G T C A G T C G T C A C G T A A G T C C G T A C G T A A C G T T G C A G T A C C G A T
p-value:1e-13
log p-value:-3.112e+01
Information Content per bp:1.901
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets123.3 +/- 36.3bp
Average Position of motif in Background90.9 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGKATTGWTGGG---
NNNNNATTGATGNGTGN
A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

SOX12/MA1561.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGKATTGWTGGG-
--NATTGTTCGGT
C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G A C G T
A C G T A C G T A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T

SOX14/MA1562.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGKATTGWTGGG
--CATTGTTCGG
C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
A C G T A C G T G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGKATTGWTGGG
---ATTGTTA--
C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AGKATTGWTGGG
---ATTGTT---
C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AGKATTGWTGGG--
GGAAAAATTGTTAGGAA
A C G T A C G T A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGKATTGWTGGG--
AAAATTGTTATGAA
C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G A C G T A C G T
C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGKATTGWTGGG
NNTGATTGATGNN
A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

PBX1/MA0070.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGKATTGWTGGG
TTTGATTGATGN-
A C G T C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

SOX8/MA0868.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGKATTGWTGGG
-CCATTGTTCT-
C G T A A C T G A C G T C G T A A C G T A C G T A C T G C G A T A C G T A C T G A C T G A C T G
A C G T A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T