Information for 21-GGTCATGTCCAG (Motif 26)

A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C T G C G T A A G T C A G T C
p-value:1e-3
log p-value:-8.025e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets173.0 +/- 0.0bp
Average Position of motif in Background189.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXRG(var.2)/MA1556.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGTCATGTCCAG
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
T C A G T C G A A T C G A C T G C A G T A G T C G T C A A G C T T C A G G T C A G T A C T A G C A G C T A G T C

RARG(var.3)/MA1553.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATGTCCAG
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A C T T C A G G C T A G T A C G T A C A G C T G A C T

RXRB(var.2)/MA1555.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATGTCCAG
GAGGTCATGACCTC
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
T C A G C T G A C A T G C A T G A C G T A G T C C T G A A G C T T C A G T G C A T G A C G T A C A G C T A G T C

RARB(var.3)/MA1552.1/Jaspar

Match Rank:4
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGTCATGTCCAG
AAGGTCATGACCTT
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
C T G A T C G A C T A G C A T G A C G T A G T C C T G A G A C T T C A G T C G A G T A C T G A C A G C T G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTCATGTCCAG
AGGTCA-------
A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTCATGTCCAG
AGGTCAAGGTCA-
A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T

NR2C1/MA1535.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTCATGTCCAG
CGAGGTCAC------
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
G T A C C T A G T C G A A C T G A C T G A C G T A T G C C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

RARA::RXRG/MA1149.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTCATGTCCAG----
GAGGTCATGTAGAGGTCA
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
C T A G T C G A C A T G C A T G A C G T A G T C C T G A G C A T A T C G A C G T C T G A T C A G T C G A C A T G C A T G A C G T A G T C T C G A

NR2C2(var.2)/MA1536.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTCATGTCCAG
GAGGTCAT------
A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
T C A G T C G A A C T G A C T G A C G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGTCATGTCCAG
AGRGGTCA-------
A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C T G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T