Information for 1-YTWTRCTCCWTS (Motif 1)

A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A A T C G A C T G C G T A A C T G A G C T C G T A C G A T C G T A C T G A
p-value:1e-6
log p-value:-1.542e+01
Information Content per bp:1.830
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif27.27%
Number of Background Sequences with motif94.3
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets100.0 +/- 55.9bp
Average Position of motif in Background96.9 +/- 82.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YTWTRCTCCWTS
CNGTCCTCCC--
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:YTWTRCTCCWTS---
---GGCTCYAKCAYC
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--YTWTRCTCCWTS---
TACGAGACTCCTCTAAC
A C G T A C G T A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:YTWTRCTCCWTS
----GCTCCG--
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T

OTX2/MA0712.2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YTWTRCTCCWTS
NNCTAATCCCNN
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

PH0137.1_Pitx1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--YTWTRCTCCWTS---
NTTGTTAATCCCTCTNN
A C G T A C G T A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:YTWTRCTCCWTS
TTTCACACCTN-
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

PITX1/MA0682.2/Jaspar

Match Rank:8
Score:0.52
Offset:2
Orientation:forward strand
Alignment:YTWTRCTCCWTS
--CTAATCCC--
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
A C G T A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:YTWTRCTCCWTS
-NYTAATCCYB-
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:YTWTRCTCCWTS
--ATAATCCC--
A G C T A C G T C G T A C G A T C T G A A G T C A C G T A G T C A T G C C G A T A C G T A T C G
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T