Information for 25-GGTGTCTTGC (Motif 36)

A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A A C T G C G T A A G T C C G T A A G T C A G T C
p-value:1e-2
log p-value:-6.769e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background92.2 +/- 109.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGTGTCTTGC--
TNNNNGGTGTCATNTNT
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GGTGTCTTGC
--TGTCTAGA
A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
A C G T A C G T G A C T A C T G A C G T A G T C A C G T C T G A A C T G T G C A

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGTGTCTTGC
TAAGGCGTCTTG-
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGTGTCTTGC----
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GGTGTCTTGC----
--TGTCTGDCACCT
A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCTTGC
VBSYGTCTGG-
A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGTGTCTTGC
-CTGTCTGG-
A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTGTCTTGC
AGGTGTCA---
A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGTGTCTTGC
NRRGGGTCTT--
A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

TBX3/MA1566.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGTGTCTTGC
GAGGTGTGAA--
A C G T A C G T A C T G A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C
C T A G C T G A T A C G T A C G G A C T A C T G A G C T A T C G C T G A T C G A A C G T A C G T