Information for 3-ATGCACAAGTGT (Motif 5)

C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A G T C A C G T A C G T A C T G C G A T C T A G A G T C C G T A A C G T
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.945
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif30.00%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets19.3 +/- 1.7bp
Average Position of motif in Background106.7 +/- 88.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:ATGCACAAGTGT
-DGCACACGTG-
C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T
A C G T C T G A T C A G G T A C T G C A A G T C C G T A A G T C A C T G A C G T A C T G A C G T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:ATGCACAAGTGT--
--NNACAGGTGTNN
C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T

Rbpjl/MA1621.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATGCACAAGTGT---
-NNNACAGGTGTNNN
C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ATGCACAAGTGT
---NTCAAGTGG
C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

CEBPD/MA0836.2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATGCACAAGTGT
TATTGCACAATAT-
A C G T A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T
C A G T T C G A G A C T C A G T C A T G G A T C C T G A G A T C G T C A C T G A A G C T G C T A G C A T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATGCACAAGTGT--
--GNMCAGGTGTGC
C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATGCACAAGTGT-
---NTCAAGTGGN
C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATGCACAAGTGT-
---AACACGTGTT
C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T

POU5F1/MA1115.1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGCACAAGTGT
ATATGCAAATT---
A C G T A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGCACAAGTGT----
NANTTTCAAGTGGTTAN
A C G T C G T A A C G T A C T G A G T C C G T A A G T C C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T