Information for 9-CACCTTATGA (Motif 27)

A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C G T C G T A C G T A A C T G A C T G A C G T A C T G
p-value:1e-3
log p-value:-7.040e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif41.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.0 +/- 0.0bp
Average Position of motif in Background81.1 +/- 123.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CACCTTATGA--
CACCATATGGCG
A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C G T
A G T C C T G A T A G C T A G C C T G A A C G T T C G A G A C T C A T G A C T G G A T C T C A G

SCRT1/MA0743.2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTATGA---
NNCCACCTGTTGAANN
A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T
C G T A T C G A G T A C G T A C C T G A G A T C G A T C C G A T T A C G G A C T C A G T C T A G T G C A G C T A G A C T G C A T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACCTTATGA
AACCTTATAT
A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

OLIG2/MA0678.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACCTTATGA-
-ACCATATGGT
A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A C G T
A C G T C T G A T G A C T G A C C T G A A C G T T G C A G A C T C A T G A C T G G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACCTTATGA
TGACACCT-----
A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACCTTATGA-
-ACCATATGTT
A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A C G T
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CACCTTATGA-
-ACCATATGTT
A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A C G T
A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CACCTTATGA----
CATTGACCTTTTGACCTC
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C

SCRT1(Zf)/HEK293-SCRT1.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACCTTATGA
CACCTGTTGC
A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A
G T A C C T G A G A T C G A T C A C G T A C T G C G A T C A G T T C A G T G A C

Rarg/MA0859.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CACCTTATGA----
TTGACCTTTTGACCTT
A C G T A C G T A G T C C G T A A G T C A G T C A C G T A C G T C G T A A C G T A C T G C G T A A C G T A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T