Information for 14-HCAATCATTTTA (Motif 20)

G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
Reverse Opposite:
A C G T G T C A C G T A C G T A C G T A A C G T C T A G C G T A A C G T C G A T A C T G C T A G
p-value:1e-7
log p-value:-1.732e+01
Information Content per bp:1.841
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.3 +/- 24.8bp
Average Position of motif in Background80.3 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:HCAATCATTTTA
--AATTATT---
G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:HCAATCATTTTA
CCAATCAA----
G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T

PB0144.1_Lef1_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----HCAATCATTTTA
GAAGATCAATCACTTA-
A C G T A C G T A C G T A C G T A C G T G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A A C G T

LHX2/MA0700.2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--HCAATCATTTTA
AACCAATTAAT---
A C G T A C G T G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
C G T A C G T A A T G C G A T C G C T A G C T A C G A T C G A T G C T A C G T A G C A T A C G T A C G T A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----HCAATCATTTTA
GAAGATCAATCACTAA-
A C G T A C G T A C G T A C G T A C G T G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
T A C G C T A G T C G A T A C G G C T A G C A T A G T C C G T A C T G A C A G T G A T C C T G A A T G C A C G T G C T A C G T A A C G T

NFYC/MA1644.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--HCAATCATTTTA
AGCCAATCAGA---
A C G T A C G T G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
T C G A C T A G A G T C G T A C G C T A T C G A G A C T T A G C T C G A T A C G T G C A A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---HCAATCATTTTA
CCATCAATCAAA---
A C G T A C G T A C G T G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A A C G T A C G T A C G T

LHX1/MA1518.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:HCAATCATTTTA
GCAATTAC----
G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
A T C G G A T C T G C A G C T A A C G T A G C T C G T A T A G C A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----HCAATCATTTTA
ATGGTTCAATAATTTTG
A C G T A C G T A C G T A C G T A C G T G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:HCAATCATTTTA
-TAATCAATTA-
G A T C A G T C C G T A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T G T C A
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A A C G T