Information for 15-CACGCTATTG (Motif 21)

A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G
Reverse Opposite:
A T G C C G T A G T C A A C G T C G T A A C T G A G T C A C T G C G A T A C T G
p-value:1e-6
log p-value:-1.496e+01
Information Content per bp:1.941
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.18%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.2 +/- 54.5bp
Average Position of motif in Background110.4 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACGCTATTG
CACGCA----
A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CACGCTATTG
TBGCACGCAA---
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CACGCTATTG---
----CCATTGTTC
A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

OSR1/MA1542.1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACGCTATTG--
--TGCTACTGTT
A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G A C G T A C G T
A C G T A C G T G A C T T C A G A G T C G A C T G C T A G T A C A G C T C T A G A G C T C A G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACGCTATTG
ATCACCCCAT--
A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACGCTATTG
GTGCCACGCGACTG
A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

SOX15/MA1152.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CACGCTATTG----
----CTATTGTTTT
A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A C T C G T A A C G T C G A T T C A G C G A T G A C T G A C T G C A T

PAX5/MA0014.3/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CACGCTATTG
NNGGTCACGCTC---
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C A C G T A C G T A C G T

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CACGCTATTG---
-----TATTGAYY
A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

PB0127.1_Gata6_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CACGCTATTG-----
GCGGCGATATCGCAGCG
A C G T A C G T A G T C C G T A A G T C A C T G A G T C A C G T C G T A A C G T C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T