Information for 15-AAGCTACAAAGT (Motif 20)

C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T
Reverse Opposite:
C G T A A G T C A C G T A C G T A C G T A C T G A C G T C G T A A C T G A G T C A C G T A C G T
p-value:1e-3
log p-value:-8.872e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.0 +/- 0.0bp
Average Position of motif in Background158.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dmrt1/MA1603.1/Jaspar

Match Rank:1
Score:0.80
Offset:2
Orientation:forward strand
Alignment:AAGCTACAAAGT---
--GATACAAAGTATC
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G G C T A G C A T C G T A G A T C G C T A G C T A C G T A C T A G C G A T C G T A C G A T G T A C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGCTACAAAGT---
YDGHTACAWTGTADC
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAGCTACAAAGT---
TWGHWACAWTGTWDC
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

SOX10/MA0442.2/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AAGCTACAAAGT-
--AAAACAAAGAA
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAGCTACAAAGT-----
----TCCAAAGTCCAGA
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AAGCTACAAAGT-----
----TCCAAAGTCCAAA
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:AAGCTACAAAGT-----
-----ACAAAGGNBCCT
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGCTACAAAGT
--VRRACAAWGG
C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T
A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAGCTACAAAGT---
CANAGNNCAAAGTCCA
A C G T C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAGCTACAAAGT--
ACATGCTACCTAATAC
A C G T A C G T C G T A C G T A A C T G A G T C A C G T C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C