Information for 6-MHMTARAC (Motif 19)

T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C
Reverse Opposite:
C T A G G C A T G A T C G A C T G C T A C A G T C T A G A C G T
p-value:1e-1
log p-value:-4.018e+00
Information Content per bp:1.481
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif482.7
Percentage of Background Sequences with motif1.00%
Average Position of motif in Targets100.8 +/- 47.7bp
Average Position of motif in Background100.2 +/- 64.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:MHMTARAC----
-AATAAACAATN
T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T A C G T A C G T A C G T
A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Smad4/MA1153.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:MHMTARAC-
-TCTAGACA
T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T
A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:MHMTARAC-
-TATTGAYY
T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T
A C G T G C A T C G T A C G A T G A C T A C T G C T G A G A C T G A T C

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-MHMTARAC-
TGTCTAGACG
A C G T T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--MHMTARAC--
WWATRTAAACAN
A C G T A C G T T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:MHMTARAC-
AAATAAACA
T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

BARHL1/MA0877.2/Jaspar

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:MHMTARAC--
--CTAAACGG
T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T A C G T
A C G T A C G T T A G C C G A T C G T A G T C A C G T A A G T C C T A G C A T G

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:MHMTARAC---
-GCTAAACGGT
T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T A C G T A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

SMAD5/MA1557.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-MHMTARAC-
TGTCTAGACA
A C G T T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T
G A C T T C A G C A G T T G A C A C G T T G C A T A C G G T C A G A T C G C T A

Foxf1/MA1606.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:MHMTARAC---
ATGTAAACAAA
T G C A G A T C G T C A C G A T C T G A C T A G C G T A G A T C A C G T A C G T A C G T
C G T A C G A T T C A G C A G T G C T A G C T A C T G A A G T C G C T A C T G A C G T A