Information for 3-TTTTATCC (Motif 31)

A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G T G C A A C G T C G T A C G T A C G T A G T C A
p-value:1e-4
log p-value:-1.107e+01
Information Content per bp:1.885
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif6.15%
Number of Background Sequences with motif1637.4
Percentage of Background Sequences with motif3.41%
Average Position of motif in Targets97.7 +/- 55.5bp
Average Position of motif in Background100.2 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TTTTATCC-
-ATAATCCC
A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTTTATCC------
NTTGTTAATCCCTCTNN
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0124.1_Obox5_1/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATCC-----
NANANTTAATCCCNNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PITX1/MA0682.2/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TTTTATCC-
-CTAATCCC
A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T
A C G T G A T C A C G T C G T A C G T A A C G T G T A C A G T C G T A C

OTX2/MA0712.2/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTTTATCC---
NNCTAATCCCNN
A C G T A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T A C G T A C G T
G C A T G C A T G A T C G C A T C G T A G T C A C A G T G A T C G A T C G A T C G C A T C G A T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTTTATCC-
CTTAATCCC
A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTTTATCC--
NYTAATCCYB
A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T A C G T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TTTTATCC-----
GATAATTAATCCCTCTT
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTTATCC
TTTAAT--
A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C
G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TTTTATCC-
-TTAATCCG
A C G T A C G T A C G T C G A T C G T A A C G T A G T C A G T C A C G T
A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G