Information for 1-TWTTASHC (Motif 38)

A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C
Reverse Opposite:
C T A G C T A G A T C G C G A T C G T A C T G A C G A T C T G A
p-value:1e-3
log p-value:-7.017e+00
Information Content per bp:1.616
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif23.08%
Number of Background Sequences with motif801.7
Percentage of Background Sequences with motif1.52%
Average Position of motif in Targets57.8 +/- 24.8bp
Average Position of motif in Background94.4 +/- 76.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TWTTASHC----
CCGTATTATAAACAA
A C G T A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C A C G T A C G T A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Arid3b/MA0601.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TWTTASHC--
ATATTAATTAA
A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C A C G T A C G T
C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TWTTASHC----
GACTTTTAWTTTGAA
A C G T A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C A C G T A C G T A C G T A C G T
C T A G C T G A A G T C G A C T G A C T G A C T A C G T C T G A G C A T C A G T G A C T C G A T T C A G C T G A G T C A

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TWTTASHC--
NCNTTTGTTATTTNN
A C G T A C G T A C G T A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------TWTTASHC
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------TWTTASHC
NNTNNCAATATTAG--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

GSX1/MA0892.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TWTTASHC
CCTAATTAAA-
A C G T A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C
G T A C A T G C G A C T G T C A T C G A G C A T G A C T C G T A T C G A G C T A A C G T

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TWTTASHC
CCAATTAA--
A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TWTTASHC
ACTAATTAGC-
A C G T A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T

BARX1/MA0875.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TWTTASHC
GCAATTAG--
A C G T A C G T A G C T G C T A A G C T A C G T C G T A T A G C G A T C G A T C
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T