Information for 9-GCGGACCCTT (Motif 20)

A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T
Reverse Opposite:
G T C A C G T A C T A G A C T G A T C G A C G T A G T C A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.898
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.5 +/- 55.6bp
Average Position of motif in Background105.3 +/- 40.9bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.90
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP(Zf)/K562-HINFP.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GCGGACCCTT
GCGGACCBWA
A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T
A T C G G T A C A C T G A C T G G T C A A T G C A T G C A T G C G C T A T C G A

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACCCTT
NCGCGGACGTTG
A C G T A C G T A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GCGGACCCTT
-CGGAGC---
A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------GCGGACCCTT-
TCTTTGGCGTACCCTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGGACCCTT----
NNGCACCTTTCTCC
A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GCGGACCCTT
RGKGGGCGGAGC---
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCGGACCCTT-
-CTGACCTTTG
A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACCCTT----
NNNGTGACCTTTGNNN
A C G T A C G T A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGGACCCTT----
NNNNTGACCTTTNNNN
A C G T A C G T A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCGGACCCTT----
--TGACCTTTNCNT
A C T G A G T C A C T G A C T G C G T A A T G C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T