Information for 13-GGTTCACTCC (Motif 34)

A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A A C T G A C G T A C T G C G T A C G T A A G T C A G T C
p-value:1e-3
log p-value:-7.889e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif14.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets135.0 +/- 0.0bp
Average Position of motif in Background119.2 +/- 89.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GGTTCACTCC-
TGGTACATTCCA
A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A

MSANTD3/MA1523.1/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGTTCACTCC-
-GTACACTCAC
A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A T C G A C G T T G C A G A T C C G T A G A T C G C A T G A T C G T C A G T A C

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTTCACTCC--
--TTCACACCTT
A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T

VDR/MA0693.2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGTTCACTCC
TGAGTTCA----
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GGTTCACTCC-----
NNTTTTCACACCTTNNN
A C G T A C G T A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBX18/MA1565.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGTTCACTCC---
-NTTCACACCTCC
A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T A C G T A C G T
A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GGTTCACTCC-
-TTTCACACCT
A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGTTCACTCC--
GTTTCACTTCCG
A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T A C G T
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGTTCACTCC-
-TTTCACACCT
A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GGTTCACTCC--
-CTTCACACCTA
A C T G A C T G A C G T A C G T A G T C C G T A A G T C A C G T A G T C A G T C A C G T A C G T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A