Information for 13-AATTTCAAACCC (Motif 14)

C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T A C G T A C T G C G T A C G T A C G T A A C G T A C G T
p-value:1e-4
log p-value:-1.073e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AATTTCAAACCC
--TTTGAAACCG
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AATTTCAAACCC----
NNTTTTCACACCTTNNN
A C G T C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AATTTCAAACCC
--TTTCACACCT
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C
A C G T A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

LIN54/MA0619.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AATTTCAAACCC
-NATTCAAAT--
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AATTTCAAACCC
-ACATCAAAGG-
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C
A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

TBR1/MA0802.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AATTTCAAACCC
--TTTCACACCT
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C
A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AATTTCAAACCC-
NTTTTCACACCTT
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX18/MA1565.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AATTTCAAACCC--
--NTTCACACCTCC
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AATTTCAAACCC-
--TTTCACACCTN
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C A C G T
A C G T A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AATTTCAAACCC-
--CTTCACACCTA
C G T A C G T A A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C A C G T
A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A