Information for 9-AAGGCTGG (Motif 28)

C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C G T C A A C T G A G T C A G T C A G C T A C G T
p-value:1e-4
log p-value:-1.043e+01
Information Content per bp:1.935
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif900.1
Percentage of Background Sequences with motif1.87%
Average Position of motif in Targets107.3 +/- 54.5bp
Average Position of motif in Background101.4 +/- 55.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AAGGCTGG
--NGCTN-
C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAGGCTGG
TWGTCTGV
C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

E2F6/MA0471.2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGGCTGG----
GGGGGCGGGAAGG
A C G T C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
T A C G T C A G C T A G T C A G T A C G G T A C C T A G A T C G T A C G T C G A T C G A T C A G T A C G

PRDM15(Zf)/ESC-Prdm15-ChIP-Seq(GSE73694)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGGCTGG------
AAAACCTGGANHGGR
A C G T C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A T C G A T C G A A G T C T G A C G A C T A C T G C T A G G T C A T A G C G C A T T C A G C T A G T C A G

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTGG
NAACAGCTGG
A C G T A C G T C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AAGGCTGG-----
NNTNNTGTCTGGNNTNG
A C G T A C G T A C G T A C G T C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGCTGG---
-GGTCTGGCAT
C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAGGCTGG------
NGTAGGTTGGCATNNN
A C G T A C G T C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGGCTGG---
-WDNCTGGGCA
C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAGGCTGG---
AAGGCAAGTGT
C G T A T C G A A C T G A C T G A G T C A C G T A C T G A C T G A C G T A C G T A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T