Information for 2-GGACAGAACCAG (Motif 2)

A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C T A G C G A T A C G T A G T C A C G T A T C G A C G T G T A C A G T C
p-value:1e-14
log p-value:-3.341e+01
Information Content per bp:1.902
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets126.9 +/- 61.2bp
Average Position of motif in Background67.9 +/- 41.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GGACAGAACCAG
TGGAATGTACCA-
A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G
C G A T C T A G A T C G C T G A T G C A C G A T T C A G G C A T G T C A A G T C G A T C G C T A A C G T

PRDM4/MA1647.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGACAGAACCAG--
---NAGAAACAGNN
A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

OSR2/MA1646.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGACAGAACCAG
AAACAGAAGCAG
A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GGACAGAACCAG
CCAGGAACAG------
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.52
Offset:-10
Orientation:reverse strand
Alignment:----------GGACAGAACCAG
TCAGCACCATGGACAGCTCC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.52
Offset:-11
Orientation:forward strand
Alignment:-----------GGACAGAACCAG
TTCAGCACCATGGACAGCGCC--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGACAGAACCAG---
GGGRAARRGRMCAGMTG
A C G T A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GGACAGAACCAG----
YCAGGCWCAGTACCAGGCTC
A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:9
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GGACAGAACCAG
CYWSTGGTCARA-----
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G
G A T C G A C T C G T A T A G C C G A T A C T G A C T G G A C T T G A C C G T A T C A G C T G A A C G T A C G T A C G T A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------GGACAGAACCAG--
NAAACCGGTTNNAACCGGTT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T G C C G T A A C T G C G T A C G T A A G T C A G T C C G T A A C T G A C G T A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T