Information for 13-CCTAGACAGCTC (Motif 15)

A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A C G T A C T G A C G T A G T C A C G T C G T A A C T G A C T G
p-value:1e-4
log p-value:-9.453e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets75.0 +/- 0.0bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4/MA1153.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CCTAGACAGCTC
TCTAGACA----
A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T

BCL6/MA0463.2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGACAGCTC
NATTCCTCGAAAGCAN
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
G T C A C T G A G C A T G A C T T G A C G A T C C G A T T G A C T C A G C G T A T G C A C G T A C A T G G A T C C T G A C G A T

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGACAGCTC---
NTATTGACAGCTNNTT
A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C T A G A C G T C G T A C G A T A C G T A C T G C G T A A G T C C T G A A C T G A T G C G A C T T A G C A T C G G C A T G C A T

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGACAGCTC---
GTATTGACAGCTNNTT
A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C T G A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C A T G T A G C G A C T T C G A T A C G G C A T C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTAGACAGCTC
-CCAGACAG---
A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGACAGCTC---
GGATTGACAGGTCNTT
A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGACAGCTC---
NTATTGACAGGTNNTN
A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C T A G C A G T G C T A C G A T G A C T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A G C T G C A T C G A T

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTAGACAGCTC
CGTCTAGACA----
A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTAGACAGCTC-
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCTAGACAGCTC---
GATATTGACAGCTGCGT
A C G T A C G T A G T C A G T C A C G T C G T A A C T G C G T A A G T C C G T A A C T G A G T C A C G T A G T C A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T