| p-value: | 1e-4 |
| log p-value: | -1.107e+01 |
| Information Content per bp: | 1.885 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 57.14% |
| Number of Background Sequences with motif | 3103.8 |
| Percentage of Background Sequences with motif | 2.63% |
| Average Position of motif in Targets | 75.0 +/- 48.6bp |
| Average Position of motif in Background | 100.7 +/- 87.1bp |
| Strand Bias (log2 ratio + to - strand density) | 2.0 |
| Multiplicity (# of sites on avg that occur together) | 1.25 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ACTGAATA--- -ATGMATATDC |
|
|
|
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
| Match Rank: | 2 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ACTGAATA--- -ATGAATATTC |
|
|
|
PB0068.1_Sox1_1/Jaspar
| Match Rank: | 3 |
| Score: | 0.69 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ACTGAATA---- NNNTATTGAATTGNNN |
|
|
|
Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 4 |
| Score: | 0.67 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ACTGAATA HDGYAATGAAAN |
|
|
|
PB0178.1_Sox8_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.67 |
| Offset: | -5 |
| Orientation: | reverse strand |
| Alignment: | -----ACTGAATA- NNTNTCATGAATGT |
|
|
|
NKX2-5/MA0063.2/Jaspar
| Match Rank: | 6 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ACTGAATA ACCACTCAAAA |
|
|
|
ONECUT1/MA0679.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.65 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ACTGAATA---- AAAAAATCAATAAATA |
|
|
|
PB0028.1_Hbp1_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.64 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------ACTGAATA-- ACTATGAATGAATGAT |
|
|
|
Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer
| Match Rank: | 9 |
| Score: | 0.63 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ACTGAATA GGYAATGAAA- |
|
|
|
PB0170.1_Sox17_2/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----ACTGAATA----- NTTNTATGAATGTGNNC |
|
|
|