Information for 15-GTAGGATTAA (Motif 30)

A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C G T A G T C A G T C A C G T C G T A A G T C
p-value:1e-3
log p-value:-7.175e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets113.0 +/- 0.0bp
Average Position of motif in Background104.1 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:GTAGGATTAA-
-VRGGATTARN
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PITX3/MA0714.1/Jaspar

Match Rank:2
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GTAGGATTAA-
--GGGATTANN
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GTAGGATTAA
--RGGATTAR
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PITX1/MA0682.2/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GTAGGATTAA
--NGGATTAN
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A
A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:GTAGGATTAA
--CGGATTAN
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

OTX2/MA0712.2/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTAGGATTAA--
AAGGGATTAGAA
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GTAGGATTAA----
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTAGGATTAA-
-GNGGATTAGN
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:9
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:GTAGGATTAA-
---GGATTAGC
A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

PH0138.1_Pitx2/Jaspar

Match Rank:10
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GTAGGATTAA-----
TGAAGGGATTAATCATC
A C G T A C G T A C T G A C G T C G T A A C T G A C T G C G T A A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C