Information for 18-TGTCACTACTGC (Motif 27)

A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C T G A C G T C G T A A C T G A C G T A C T G C G T A A G T C C G T A
p-value:1e-3
log p-value:-8.272e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACTACTGC
CCTGTCAA------
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGTCACTACTGC
NTGTCAN------
A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PKNOX1/MA0782.2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TGTCACTACTGC
NNGCTGTCACTCANN-
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
G A C T T C G A A T C G T G A C G C A T C T A G G A C T T A G C G C T A T G A C G A C T A G T C G C T A C G T A G C T A A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGTCACTACTGC
VGCTGWCAVB-----
A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTCACTACTGC
GTTTCACTTCCG-
A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGTCACTACTGC
SCTGTCARCACC--
A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------TGTCACTACTGC
AATTACCTGTCAATAC---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------TGTCACTACTGC
AAGCACCTGTCAATAT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCACTACTGC
NNNCCTGTCACTCANNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGTCACTACTGC
NHRTCACGACDN-
A C G T A C G T A C T G A C G T A G T C C G T A A G T C A C G T C G T A A G T C A C G T A C T G A G T C
T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C A C G T