Information for 11-CAGACAGAACAT (Motif 12)

A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.896e+01
Information Content per bp:1.972
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets107.9 +/- 46.8bp
Average Position of motif in Background82.2 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------CAGACAGAACAT
CAAATCCAGACATCACA-
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGAACAT
CCAGACAG-----
A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGAACAT
CCAGACRSVB---
A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGACAGAACAT
BCAGACWA-----
A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGACAGAACAT----
AACACCAAAACAAAGGA
A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

SOX12/MA1561.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CAGACAGAACAT--
---ACCGAACAATG
A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A G T A C G A T C C A T G T G C A T C G A A G T C C G T A T G C A G A C T T A C G

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:7
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGACAGAACAT
RHHCAGAGAGGB---
A C G T A C G T A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G A C G T A C G T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGACAGAACAT
AGAAACAGAAACT
A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

Smad4/MA1153.1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGACAGAACAT
TCTAGACA------
A C G T A C G T A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGACAGAACAT
--NACAGGAAAT
A G T C C G T A A C T G G T C A A G T C C G T A A C T G C G T A C G T A A G T C C G T A A C G T
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T