| p-value: | 1e-3 |
| log p-value: | -8.025e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 2.1 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 173.0 +/- 0.0bp |
| Average Position of motif in Background | 189.0 +/- 0.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RXRG(var.2)/MA1556.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCATGTCCAG GAGGTCATGACCTC |
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|
RARG(var.3)/MA1553.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATGTCCAG AAGGTCATGACCTT |
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|
RXRB(var.2)/MA1555.1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATGTCCAG GAGGTCATGACCTC |
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|
|
RARB(var.3)/MA1552.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.68 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGTCATGTCCAG AAGGTCATGACCTT |
|
|
|
MF0004.1_Nuclear_Receptor_class/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGTCATGTCCAG AGGTCA------- |
|
|
|
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGTCATGTCCAG AGGTCAAGGTCA- |
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|
|
NR2C1/MA1535.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATGTCCAG CGAGGTCAC------ |
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|
|
RARA::RXRG/MA1149.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCATGTCCAG---- GAGGTCATGTAGAGGTCA |
|
|
|
NR2C2(var.2)/MA1536.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGTCATGTCCAG GAGGTCAT------ |
|
|
|
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGTCATGTCCAG AGRGGTCA------- |
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