Information for 3-GCCGGAGGAA (Motif 23)

A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A C G T A G T C A G T C A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.947e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.0 +/- 0.0bp
Average Position of motif in Background120.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.4/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GCCGGAGGAA--
NNGCCTGAGGCANN
A C G T A C G T A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T A C G T
A C G T C A T G A T C G T A G C A T G C A G C T A T C G T C G A T C A G A C T G T A G C G T C A T C G A A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:2
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GCCGGAGGAA--
ATTGCCTCAGGCAAT
A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T A C G T
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

TFAP2C(var.2)/MA0814.2/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GCCGGAGGAA--
GGGCCTGAGGCGGG
A C G T A C G T A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T A C G T
A C T G C A T G A T C G T A G C A T G C A G C T T A C G T G C A T A C G T A C G T A G C A T C G T C A G A T C G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCGGAGGAA
AGCCTCAGGCA
A C G T A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCCGGAGGAA--
ATTGCCTGAGGCAAT
A C G T A C G T A C G T A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2E/MA1569.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGAGGAA
NGCCTGAGGCN
A C G T A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A
G A T C A T C G A G T C A G T C A G C T A T C G T C G A A C T G A C T G A T G C C T A G

ETV4/MA0764.2/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCCGGAGGAA---
---ACAGGAAGTG
A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T C A A T C G A C T G C G T A G T C A A C T G A G C T T C A G

ZNF263/MA0528.2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCCGGAGGAA-
GGGGGGAGGAGG
A C G T A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T
T C A G A T C G C T A G T A C G A T C G A C T G G T C A A C T G A T C G T G C A T A C G A T C G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCCGGAGGAA----
--NDCAGGAARTNN
A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

ETV4(ETS)/HepG2-ETV4-ChIP-Seq(ENCODE)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCGGAGGAA
ACCGGAAGTG
A C T G A G T C A G T C A C T G A C T G C G T A A C T G A C T G C G T A C G T A
C T G A T A G C T G A C T C A G C T A G G T C A C G T A T C A G A G C T T C A G