Information for 4-GKCATGRGTTGA (Motif 4)

C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
Reverse Opposite:
C G A T T A G C C G T A C G T A T A G C G A T C G A T C T G C A A G C T C T A G T G C A G A T C
p-value:1e-5
log p-value:-1.197e+01
Information Content per bp:1.662
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif35.71%
Number of Background Sequences with motif1245.6
Percentage of Background Sequences with motif2.06%
Average Position of motif in Targets88.8 +/- 44.8bp
Average Position of motif in Background98.7 +/- 75.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

VDR/MA0693.2/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GKCATGRGTTGA
----TGAGTTCA
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GKCATGRGTTGA-
---ATGGGGTGAT
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GKCATGRGTTGA-
---GTGGGGTGAT
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

ATOH7/MA1468.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GKCATGRGTTGA
GACATATGTT--
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
C T A G T G C A A G T C T C G A A C G T T C G A G A C T A C T G A C G T A G C T A C G T A C G T

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GKCATGRGTTGA
NMMNBAAAGGGTTAA
A C G T A C G T A C G T C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

NEUROG2/MA0669.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GKCATGRGTTGA
GACATATGTT--
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GKCATGRGTTGA-
---ATGGGGTGAT
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A A C G T
A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GKCATGRGTTGA
ACCATATGTT--
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

HES6/MA1493.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GKCATGRGTTGA
GGCACGTGTT--
C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
A C T G T A C G T A G C C G T A A G T C T A C G A C G T A C T G G C A T G A C T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GKCATGRGTTGA
NAACATATGTTT-
A C G T C A T G A C G T A G T C C T G A A C G T C T A G C T A G A C T G A C G T A C G T A C T G C G T A
G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T A C G T