Information for 3-TTGWTSKGRRTM (Motif 3)

A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
Reverse Opposite:
A C T G C G T A A G T C A G T C A G T C G T A C A T G C C G T A C G T A A G T C C G T A C G T A
p-value:1e-6
log p-value:-1.488e+01
Information Content per bp:1.818
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif68.1
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets177.3 +/- 17.2bp
Average Position of motif in Background111.6 +/- 68.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX12/MA1561.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTGWTSKGRRTM
NATTGTTCGGT---
A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
A T G C C T G A A C G T A C G T C T A G A G C T A C G T G T A C C T A G C A T G C A G T A C G T A C G T A C G T

SOX14/MA1562.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGWTSKGRRTM
CATTGTTCGG----
A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
G T A C T G C A C A G T A C G T T C A G C G A T G C A T G T A C C T A G A C T G A C G T A C G T A C G T A C G T

Duxbl(Homeobox)/NIH3T3-Duxbl.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGWTSKGRRTM
TTGATTRGRTTA
A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
G A C T C G A T A C T G C G T A A C G T A C G T C T A G C T A G C T A G A G C T A G C T C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------TTGWTSKGRRTM
NNNNNATTGATGNGTGN-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTGWTSKGRRTM
ATTGTT-------
A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTGWTSKGRRTM
CCATTGTTCT-----
A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
A T G C G A T C C G T A C A G T C G A T T C A G C G A T G A C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGWTSKGRRTM
TAATTGTTCTAAAC-
A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTGWTSKGRRTM-
NNCTTTGTTTTGNTNNN
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTGWTSKGRRTM
CTTTGATGTGSB--
A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
A G T C G A C T A G C T C G A T A T C G G C T A C G A T A T C G C G A T A C T G T A C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTGWTSKGRRTM
CCATTGTTNY-----
A C G T A C G T A C G T A C G T A C G T A C T G C G A T A C G T A T C G A C T G A C T G C T A G C T A G A C G T G T A C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T