Information for 7-GGGGCAACCA (Motif 28)

A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.834e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets128.0 +/- 0.0bp
Average Position of motif in Background89.6 +/- 79.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Plagl1/MA1615.1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGGCAACCA
CCCTGGGGCCAGG-
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A
T A G C T A G C T A G C G C A T T A C G T C A G T A C G T A C G G T A C A T G C T C G A A T C G T A C G A C G T

RFX7/MA1554.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGGGCAACCA
NTAGCAACG-
A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A
C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCAACCA-
NNNNTTGGGCACNNCN
A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZFP57/MA1583.1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCAACCA
NNTGCGGCAANNN
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A
T C G A A T G C A G C T T A C G G A T C A T C G C T A G A T G C T G C A T G C A A G C T T A C G T A G C

PB0156.1_Plagl1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGGGCAACCA---
GCTGGGGGGTACCCCTT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGGCAACCA
HAWGRGGCCM---
A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A
G A C T T C G A C G A T T A C G C T A G T A C G A C T G A T G C G T A C G T A C A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGGGCAACCA-
CTCCAGGGGTCAATTGA
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCAACCA
TNNGGGCAG---
A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGGCAACCA
NGTGGGCAT---
A C G T A C G T A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GGGGCAACCA-
---CCAATCAA
A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A