Information for 1-AHTGABCCVTAC (Motif 1)

C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
Reverse Opposite:
A T C G A C G T C G T A A C G T A C T G C T A G T A C G A C G T G T A C C G T A C A G T A C G T
p-value:1e-7
log p-value:-1.745e+01
Information Content per bp:1.745
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif1345.7
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets118.0 +/- 56.8bp
Average Position of motif in Background99.1 +/- 110.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AHTGABCCVTAC
-ATAATCCC---
C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

JUND/MA0491.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AHTGABCCVTAC
TGATGACTCATCC
A C G T C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
C G A T C T A G T C G A G A C T C A T G G C T A A T G C C G A T G T A C C T G A A G C T G T A C G A T C

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AHTGABCCVTAC--
NNNNTTGACCCCTNNNN
A C G T A C G T A C G T C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

JDP2/MA0655.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AHTGABCCVTAC
-ATGAGTCAT--
C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T

JUNB/MA0490.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AHTGABCCVTAC
AAATGACTCATTT
A C G T C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
C G T A C T G A T C G A G A C T C A T G C G T A A T G C C G A T G T A C C T G A A G C T G C A T G C A T

FOSL1/MA0477.2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AHTGABCCVTAC
TGATGACTCATCC
A C G T C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
C G A T C T A G T C G A G A C T C A T G G C T A A T G C C G A T G T A C C T G A A G C T G A T C G A T C

FOSL2::JUNB/MA1138.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AHTGABCCVTAC
-ATGAGTCATC-
C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
A C G T T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T T G A C A C G T

BATF3/MA0835.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AHTGABCCVTAC
NATGAGTCATN-
C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
C G A T G C T A G C A T C A T G G C T A A T C G C G A T G T A C C G T A C A G T G C T A A C G T

FOSL2::JUND/MA1144.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AHTGABCCVTAC
-ATGAGTCATC-
C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
A C G T T C G A A C G T A C T G G T C A T A C G A C G T G T A C C G T A A G C T T G A C A C G T

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AHTGABCCVTAC
-ATGASTCATH-
C G T A G C T A C G A T A C T G C G T A A C G T A G T C A G T C T C G A A C G T C G T A A T G C
A C G T T G C A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A C G T G T C A A C G T