Information for 3-TACAAAAGTG (Motif 10)

C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G
Reverse Opposite:
G A T C G T C A T G A C A G C T A C G T C A G T A C G T C T A G G A C T G T C A
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.820
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.60%
Number of Background Sequences with motif362.8
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets91.7 +/- 51.6bp
Average Position of motif in Background100.5 +/- 61.8bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX15/MA1152.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TACAAAAGTG
AAAACAATAG--
A C G T A C G T C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TACAAAAGTG
AAAACAAAGG--
A C G T A C G T C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TACAAAAGTG--
--NTCAAGTGGN
C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G A C G T A C G T
A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

HLTF/MA0109.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TACAAAAGTG-
-NNATAAGGNN
C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G A C G T
A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TACAAAAGTG
RACAAWGG--
C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TACAAAAGTG-
--NTCAAGTGG
C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TACAAAAGTG--
---TTAAGTGGT
C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

OSR2/MA1646.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACAAAAGTG-
AAACAGAAGCAG
A C G T C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G A C G T
G T C A G T C A T G C A T A G C C T G A T A C G C G T A T C G A C T A G A G T C G T C A T C A G

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACAAAAGTG----
GTATAAAAGGCGGGG
A C G T C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TACAAAAGTG----
GTATAAAAGGCGGGG
A C G T C A G T C T G A A G T C C G T A G T C A C G T A C T G A A C T G C A G T C T A G A C G T A C G T A C G T A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G