Information for 2-TTTCACACCYCC (Motif 2)

G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G T C A G A C T G C T A G A C G T C T A G C G A T T A C G G T C A C T G A C G T A
p-value:1e-5
log p-value:-1.372e+01
Information Content per bp:1.670
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif1163.0
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets106.0 +/- 48.4bp
Average Position of motif in Background98.3 +/- 83.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX18/MA1565.1/Jaspar

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TTTCACACCYCC
NTTCACACCTCC
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
A G C T G A C T G C A T A T G C G T C A A G T C C T G A A G T C A G T C A G C T G A T C G A T C

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TTTCACACCYCC
TTTCACACCT--
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TTTCACACCYCC--
NNTTTTCACACCTTNNN
A C G T A C G T A C G T G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TTTCACACCYCC
TTTCACACCT--
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTCACACCYCC
TTTCACACCTN-
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TTTCACACCYCC
CTTCACACCTA-
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TTTCACACCYCC
NTTTTCACACCTT-
A C G T A C G T G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTTCACACCYCC
-TTCACACCTT-
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T

Tbx6(T-box)/ESC-Tbx6-ChIP-Seq(GSE93524)/Homer

Match Rank:9
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTTCACACCYCC
-TTVACACCTH-
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
A C G T A C G T G A C T T C A G C T G A G T A C C T G A T A G C A G T C G A C T G A T C A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTCACACCYCC
ATTAACACCT--
G A C T A G C T A C G T A G T C C G T A A G T C G T C A A G T C A G T C A G T C A G T C A G T C
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T