Information for 14-GCAGGACTAA (Motif 30)

A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A A C T G A C G T A G T C A G T C A C G T A C T G A G T C
p-value:1e-3
log p-value:-7.107e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.0 +/- 0.0bp
Average Position of motif in Background114.7 +/- 56.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCAGGACTAA----
ACCGTGACTAATTNN
A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAGGACTAA-
-VRGGATTARN
A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0138.1_Pitx2/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCAGGACTAA-----
TGAAGGGATTAATCATC
A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCAGGACTAA
CNAGGCCT--
A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGGACTAA
GGGAGGACNG-
A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T

PITX1/MA0682.2/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGGACTAA
--NGGATTAN
A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A
A C G T A C G T C A T G T C A G C A T G G T C A A C G T A C G T C G T A C T A G

Zic1::Zic2/MA1628.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAGGACTAA
CACAGCAGGGG---
A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A
T A G C T C G A A G T C T G C A T A C G A G T C T C G A A T C G A C T G T A C G T C A G A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAGGACTAA----
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAGGACTAA----
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCAGGACTAA----
TGAACCGGATTAATGAA
A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C T G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A