Information for 7-GCCCTAGAAA (Motif 16)

A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T C G A T G T A C A C G T C G T A A C T G C T A G A C T G A G T C
p-value:1e-5
log p-value:-1.265e+01
Information Content per bp:1.888
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif69.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets107.0 +/- 57.0bp
Average Position of motif in Background96.9 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GCCCTAGAAA-
-CCYMATAAAA
A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T
A C G T T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCCTAGAAA---
-SCCTAGCAACAG
A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

HOXA13/MA0650.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCCTAGAAA--
-CCCAATAAAAC
A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T A C G T
A C G T T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GCCCTAGAAA
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCCCTAGAAA--------
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

RORC/MA1151.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTAGAAA-
TGACCTANTTAN
A C G T A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T
G A C T T C A G T G C A G A T C G T A C A G C T T G C A T A G C G C A T C G A T G C T A G A C T

RFX1/MA0509.2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTAGAAA---
TNCCATAGCAACNN
A C G T A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCCTAGAAA----
TACCATAGCAACGGT
A C G T A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCCTAGAAA-----
AACCCAATAAAATTCG
A C G T A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

RFX3/MA0798.2/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTAGAAA---
TNCCATAGCAACNN
A C G T A C T G A G T C A G T C A G T C A C G T C G T A C A T G C G T A C G T A C G T A A C G T A C G T A C G T
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G