Information for 15-CCCTAGAAACCC (Motif 22)

A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.556e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.3 +/- 28.9bp
Average Position of motif in Background105.7 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCCTAGAAACCC
SCCTAGCAACAG
A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCTAGAAACCC-
TACCATAGCAACGGT
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------CCCTAGAAACCC-----
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

RFX1/MA0509.2/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAGAAACCC
TNCCATAGCAACNN
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C
G A C T C A T G A G T C G A T C G T C A G A C T T C G A C T A G G A T C C T G A T C G A G A T C G T C A T C A G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCTAGAAACCC-
CCGCATAGCAACGGA
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

RFX3/MA0798.2/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCTAGAAACCC
TNCCATAGCAACNN
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C
G A C T C A T G A G T C G A T C G T C A A G C T C T G A C T A G G A T C C T G A T C G A G A T C T G A C T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCCTAGAAACCC
TGTTKCCTAGCAACM-
A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCTAGAAACCC-
TACCCTAGTTACCGA
A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A

BCL6/MA0463.2/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCTAGAAACCC-
NATTCCTCGAAAGCAN
A C G T A C G T A C G T A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A C G T
G T C A C T G A G C A T G A C T T G A C G A T C C G A T T G A C T C A G C G T A T G C A C G T A C A T G G A T C C T G A C G A T

HOXD13/MA0909.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCCTAGAAACCC
CCCAATAAAAC-
A G T C A G T C A G T C A C G T C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C A C G T