Information for 3-CGTCGGAT (Motif 17)

A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T
Reverse Opposite:
C G T A C G A T G T A C A G T C A T C G C G T A G A T C A C T G
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.744
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets130.0 +/- 17.7bp
Average Position of motif in Background169.2 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0179.1_Sp100_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CGTCGGAT-----
TCCGTCGCTTAAAAG
A C G T A C G T A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGTCGGAT--
BRRCVGTTDN
A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T A C G T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G

PH0044.1_Homez/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CGTCGGAT-----
AAAACATCGTTTTTAAG
A C G T A C G T A C G T A C G T A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A T G A C G C T A A C G T G T A C A C T G C G A T C G A T G C A T G A C T A G C T G C T A C T G A C T A G

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGTCGGAT-
-GGCVGTTR
A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A

PB0131.1_Gmeb1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------CGTCGGAT-
TGGGCGACGTCGTTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

PB0045.1_Myb_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----CGTCGGAT-----
NNNNTAACGGTTNNNAN
A C G T A C G T A C G T A C G T A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGTCGGAT
TGTCGGTT
A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T

PB0046.1_Mybl1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CGTCGGAT-----
NNANTAACGGTTNNNAN
A C G T A C G T A C G T A C G T A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A C G A T G A C T C T G A T C G A A G T C A T C G C A T G G A C T G A C T C G A T G A C T G A T C G C T A C T G A

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGTCGGAT--
CCWGGAATGY
A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T A C G T
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CGTCGGAT------
TNNTTTCGTATTNNANN
A C G T A C G T A C G T A G T C C T A G C G A T A T G C A C T G C A T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G