Information for 9-TAATGTCCATTC (Motif 12)

A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C T G A C T G C G T A A G T C C G T A A C G T A C G T C G T A
p-value:1e-3
log p-value:-8.953e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets140.0 +/- 0.0bp
Average Position of motif in Background92.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAATGTCCATTC-
GGCAAAAGTCCAATAA
A C G T A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TAATGTCCATTC
-ATTTTCCATT-
A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T

HNF4A/MA0114.4/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TAATGTCCATTC
TCCAAAGTCCAAA-
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TAATGTCCATTC
TCAATGACCTA--
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
A C G T A G T C C G T A C T G A A G C T C T A G G T C A G T A C G T A C A G C T G C T A A C G T A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TAATGTCCATTC
TCCAAAGTCCAGA-
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAATGTCCATTC--
---TGTGGATTNNN
A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

NFATC4/MA1525.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAATGTCCATTC
-ATTTTCCATN-
A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T A C G T

NKX6-3/MA1530.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAATGTCCATTC
TTTAATGAN-----
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
C G A T C G A T A G C T C T G A C G T A A C G T T C A G C T G A A T C G A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAATGTCCATTC
CTCATTTGCATW-
A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TAATGTCCATTC
GTTAATGGCC----
A C G T A C G T A C G T C G T A C G T A A C G T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A G T C
A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T