Information for 5-CCACACATCACC (Motif 7)

A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A C T G T G C A A C G T A T C G A C G T A C T G C A G T A C T G A C T G
p-value:1e-13
log p-value:-3.016e+01
Information Content per bp:1.876
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif17.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets121.0 +/- 40.4bp
Average Position of motif in Background79.1 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RREB1/MA0073.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCACACATCACC--------
CCCCAAACCACCCCCCCCCA
A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CCACACATCACC
NWAACCACADNN----
A C G T A C G T A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCACACATCACC
TGWCCTCARNTGACC
A C G T A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCACACATCACC
TGACCTCAGGTGACC
A C G T A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
G A C T T A C G C G T A T G A C A G T C G A C T A T G C C T G A C A T G T A C G G C A T T A C G T C G A T G A C G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACACATCACC
AAACCACAGAN----
A C G T A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACACATCACC
GGCCATAAATCA--
A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCACACATCACC
CAAATCCAGACATCACA
A C G T A C G T A C G T A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCACACATCACC
AAACCACANN-----
A C G T A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCACACATCACC
AAACCACAGC-----
A C G T A C G T A C G T A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCACACATCACC
GGACACACCCCC
A G T C A G T C G C T A A G T C C G T A T A G C G T C A A C G T A G T C G T C A A G T C A G T C
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C