Information for 2-GTTGCCCCTA (Motif 8)

A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G A C T G A C T G A C T G A G T C C G T A C G T A A G T C
p-value:1e-4
log p-value:-9.274e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.0 +/- 0.0bp
Average Position of motif in Background92.8 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTTGCCCCTA-
-TTCCCCCTAC
A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T
A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

THAP1/MA0597.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GTTGCCCCTA
-CTGCCCGCA
A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

PB0128.1_Gcm1_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTTGCCCCTA------
NTCNTCCCCTATNNGNN
A C G T A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

RFX7/MA1554.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTTGCCCCTA
CGTTGCTAT--
A C G T A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A
A T G C A T C G A G C T A G C T C T A G A T G C A G C T C T G A G A C T A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GTTGCCCCTA---
GGGTGTGCCCAAAAGG
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Plagl1/MA1615.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTGCCCCTA--
NNTGGCCCCAGNN
A C G T A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T
A T G C T A G C A G C T T A C G C A T G A T G C A T G C A G T C A T G C C G T A A T C G A T C G A T C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTTGCCCCTA----
NNANTTGACCCCTNNNN
A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTGCCCCTA-
-KGGCCYCWTD
A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T
A C G T C A T G C A T G T A C G G T A C A T G C G A T C A T G C G C T A A G C T C T G A

PB0156.1_Plagl1_2/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GTTGCCCCTA--
NNNNGGTACCCCCCANN
A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

ZFP57/MA1583.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTTGCCCCTA-
GCATTGCCGCAGT
A C G T A C G T A C T G A C G T A C G T A C T G A G T C A G T C A G T C A G T C A C G T C G T A A C G T
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T