Information for 2-GNGCATACATGC (Motif 2)

C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A A G C T A C T G A G C T C G T A G A C T T C A G T G A C C A T G A G T C
p-value:1e-19
log p-value:-4.508e+01
Information Content per bp:1.776
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets95.2 +/- 48.2bp
Average Position of motif in Background117.7 +/- 54.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GNGCATACATGC
----RTACGTGC
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GNGCATACATGC
--GGGTACGTGC
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C
A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:3
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GNGCATACATGC-
-----TACGTGCV
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF1A/MA1106.1/Jaspar

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GNGCATACATGC--
----GTACGTGCCC
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A A G T C C T A G A G C T T C A G G T A C A T G C A T G C

MXI1/MA1108.2/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GNGCATACATGC-
---GACACATGGC
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GNGCATACATGC
----GGACGTGC
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C
A C G T A C G T A C G T A C G T T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GNGCATACATGC------
-AAAATACATGTAATACT
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GNGCATACATGC------
-TAAATACATGTAAAATT
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GNGCATACATGC------
-AATATACATGTAATATA
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GNGCATACATGC------
-AATATACATGTAAAATT
C T A G G T A C A C T G A G T C C T G A G C A T T C G A A G T C C T G A A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T