Information for 17-CSTACGGG (Motif 39)

A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G
Reverse Opposite:
T A G C A G T C A G T C A T C G C A G T C G T A A T C G A C T G
p-value:1e-2
log p-value:-6.891e+00
Information Content per bp:1.761
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif71.1
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets100.0 +/- 45.2bp
Average Position of motif in Background105.6 +/- 63.8bp
Strand Bias (log2 ratio + to - strand density)-3.6
Multiplicity (# of sites on avg that occur together)1.86
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CSTACGGG-----
TGCGCATAGGGGAGGAG
A C G T A C G T A C G T A C G T A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CSTACGGG---
-GGAGGGGGAA
A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CSTACGGG--
TATGCGGGTA
A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T A C G T
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CSTACGGG-----
NNNNATGCGGGTNNNN
A C G T A C G T A C G T A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

NEUROD2/MA0668.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CSTACGGG
ACCATATGGC
A C G T A C G T A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CSTACGGG---
--TNNGGGCAG
A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T A C G T A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

TCF21(var.2)/MA1568.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CSTACGGG-
NGCCATATGGTG
A C G T A C G T A C G T A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T
A G T C C T A G T G A C G T A C C T G A A G C T T G C A G A C T A T C G A T C G G A C T T C A G

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CSTACGGG---
CATGCGGGTAC
A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T A C G T A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CSTACGGG---
SCCTSAGGSCAW
A C G T A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T A C G T A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

TFAP2E/MA1569.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CSTACGGG-
CGCCTCAGGCG
A C G T A C G T A G T C T A G C C G A T G T C A T A G C A C T G A C T G A T C G A C G T
G A T C A T C G A G T C A G T C A G C T T A G C T C G A A C T G A C T G A T G C C T A G