Information for 5-ATCAAGTCGC (Motif 8)

C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T
p-value:1e-4
log p-value:-9.297e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background126.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0171.1_Nkx2-1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATCAAGTCGC---
AANTTCAAGTGGCTTN
A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----ATCAAGTCGC---
NANTTTCAAGTGGTTAN
A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATCAAGTCGC---
AATTTCAAGTGGCTTN
A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATCAAGTCGC----
NNNTTAGGTAGCNTNT
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATCAAGTCGC---
AAATTCAAGTGGNTTN
A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ATCAAGTCGC----
NNTGTAGGTAGCANNT
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C A C G T A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATCAAGTCGC
NTCAAGTGG-
C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

PB0105.1_Arid3a_2/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------ATCAAGTCGC
ACCCGTATCAAATTT-
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C
G T C A G T A C T G A C T A G C T C A G A G C T T C G A A G C T T A G C C T G A C G T A T C G A C G A T G A C T C A G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ATCAAGTCGC
NTCAAGTGGN
C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ATCAAGTCGC
GKVTCADRTTWC
A C G T A C G T C G T A A C G T A G T C C G T A C G T A A C T G A C G T A G T C A C T G A G T C
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C