Information for 13-TCAGGTAAGTCT (Motif 13)

A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A G T C A C G T A C G T C G T A A G T C A G T C A C G T A C T G C G T A
p-value:1e-4
log p-value:-9.751e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TCAGGTAAGTCT
-CAGGTAAGTAT
A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TCAGGTAAGTCT
-AAGGCAAGTGT
A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCAGGTAAGTCT
VCAGGTRDRY--
A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCAGGTAAGTCT
GNMCAGGTGTGC--
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C A C G T A C G T

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCAGGTAAGTCT
NNATCAGGTGATNN-
A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCAGGTAAGTCT
-CAGATAAGGN-
A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T

SIX1/MA1118.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCAGGTAAGTCT
TATCAGGTTAC---
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
C A G T T G C A G C A T G A T C C G T A C A T G C T A G G C A T C G A T G C T A G T A C A C G T A C G T A C G T

GATA2/MA0036.3/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCAGGTAAGTCT
NNAGATAAGNN-
A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
C T G A T C G A C G T A T C A G C G T A G C A T C G T A C G T A T C A G T C G A G C T A A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCAGGTAAGTCT
-NAGATAAGNN-
A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T
A C G T T A C G G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C A G T C G A A C G T

PB0094.1_Zfp128_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCAGGTAAGTCT----
TTNGGGTACGCCNNANN
A C G T A C G T A G T C C G T A A C T G A C T G A C G T C G T A C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A