Information for 1-AARMGAGACC (Motif 4)

C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C
Reverse Opposite:
A C T G A C T G A C G T A G T C A C G T A G T C A C T G A G C T A C G T A C G T
p-value:1e-8
log p-value:-1.849e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif50.00%
Number of Background Sequences with motif682.3
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets89.8 +/- 32.5bp
Average Position of motif in Background105.7 +/- 78.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AARMGAGACC-
GAGAACCGAAACTG
A C G T A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---AARMGAGACC--
ATAAACCGAAACCAA
A C G T A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

PAX5/MA0014.3/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AARMGAGACC--
GAGCGTGACCCC
C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C A C G T A C G T
T C A G C T G A T A C G A G T C T C A G G C A T T A C G C T G A T A G C A G T C G T A C A G T C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AARMGAGACC--
CAAAATCGAAACTAA
A C G T A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AARMGAGACC-----
CTGATCGAAACCAAAGT
A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AARMGAGACC
GRAASTGAAAST
A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PB0139.1_Irf5_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AARMGAGACC---
TTGACCGAGAATTCC
A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C A C G T A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AARMGAGACC
CGGAAGTGAAAC-
A C G T A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AARMGAGACC
GAAAMTGAAACT
A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AARMGAGACC--
GGAAANTGAAACTNA
A C G T A C G T A C G T C G T A C G T A C T G A G T A C A C T G C G T A A C T G G T C A A G T C G T A C A C G T A C G T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A