Information for 10-GGACVTTTTGVA (Motif 12)

A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A C G T A C T G A G T C A A C T G C T A G A G C T A G T C A G T C
p-value:1e-4
log p-value:-1.112e+01
Information Content per bp:1.762
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif20.00%
Number of Background Sequences with motif212.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets162.7 +/- 30.1bp
Average Position of motif in Background103.0 +/- 72.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GGACVTTTTGVA----
------TTTGAAACCG
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:GGACVTTTTGVA--
-----ATTTGAATT
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

POU5F1/MA1115.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGACVTTTTGVA---
----NATTTGCATNN
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGACVTTTTGVA----
-ANATTTTTGCAANTN
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

POU2F3/MA0627.2/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGACVTTTTGVA----
---NNATTTGCATATN
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T

Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGACVTTTTGVA--
----GATTTGCATA
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G T C A A C G T G C A T C G A T T C A G G T A C G T C A A C G T C T G A

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGACVTTTTGVA---
TTGACCTTTTGACCTT
A C G T A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGACVTTTTGVA---
-----ATTTGCATAT
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GGACVTTTTGVA---
-----ATTTGCATAA
A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGACVTTTTGVA
AGGVNCCTTTGT-
A C G T A C T G C T A G C T G A A G T C T A G C A C G T A G C T A C G T A C G T A C T G T A C G C G T A
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T