Information for 20-TCTGCATGTAAT (Motif 25)

A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T C G T A A G T C C G T A A C G T A C T G A G T C C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.900e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets114.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0084.1_Irx3_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCTGCATGTAAT---
AATATACATGTAATATA
A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TCTGCATGTAAT---
AAAATACATGTAATACT
A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCTGCATGTAAT---
AATATACATGTAAAACA
A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0087.1_Irx6/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCATGTAAT--
ANTTNTACATGTANTTN
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCTGCATGTAAT
NATTTGCATNN---
A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T A C G T A C G T

PH0082.1_Irx2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCTGCATGTAAT---
TAAATACATGTAAAATT
A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCTGCATGTAAT---
AATATACATGTAAAATT
A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TCTGCATGTAAT--
ATTTGCATACAATGG
A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCTGCATGTAAT
TTCATTTGCATAT---
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T

POU2F3/MA0627.2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCTGCATGTAAT
NNATTTGCATATN--
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G T A A C G T A C T G A C G T C G T A C G T A A C G T
C G A T G C A T G C T A G C A T G C A T G C A T T C A G G T A C G T C A G C A T C G T A G C A T C G A T A C G T A C G T