Information for 5-AASSCKMTTKCC (Motif 5)

C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G G T A C C G T A C G T A A C T G G T A C A C T G A T C G A T G C A C G T A C G T
p-value:1e-4
log p-value:-1.132e+01
Information Content per bp:1.839
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif13.33%
Number of Background Sequences with motif23.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets106.0 +/- 1.0bp
Average Position of motif in Background96.6 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AASSCKMTTKCC---
-----ATTTTCCATT
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AASSCKMTTKCC---
-----ATTTTCCATT
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AASSCKMTTKCC--
---NNACTTGCCTT
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

NFATC4/MA1525.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AASSCKMTTKCC---
-----ATTTTCCATN
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AASSCKMTTKCC
CTAATCCTCTT---
A C G T A C G T C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AASSCKMTTKCC----
------ATTTCCTGTN
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AASSCKMTTKCC
--GGGAATTTCC
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C
A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:forward strand
Alignment:AASSCKMTTKCC-
------TTTTCCA
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AASSCKMTTKCC
--GGGGATTTCC
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C
A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AASSCKMTTKCC---
-----ATTTTCCATT
C G T A C G T A A T C G A T G C A G T C C A G T G T A C A C G T A C G T A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T