Information for 22-AAGGATTTAGAG (Motif 21)

C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T C G T A C G T A C G T A A C G T A G T C A G T C A C G T A C G T
p-value:1e-5
log p-value:-1.187e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGGATTTAGAG
AAGGATATNTN-
C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAGGATTTAGAG
VRGGATTARN--
C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGGATTTAGAG--
AAATGATTTATGGCT
A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGGATTTAGAG--
TGAAGGGATTAATCATC
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAGGATTTAGAG--
--TGATTTATGGCC
C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

PH0130.1_Otx2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAGGATTTAGAG--
TGTAGGGATTAATTGTC
A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAGGATTTAGAG-
TTAGAGGGATTAACAAT
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PB0181.1_Spdef_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----AAGGATTTAGAG
CTACTAGGATGTNNTN
A C G T A C G T A C G T A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGGATTTAGAG-
-RTGATTKATRGN
C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C G T
A C G T C T G A C G A T C T A G C G T A A G C T C G A T C A G T C T G A G A C T C T A G C T A G A T G C

OTX2/MA0712.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAGGATTTAGAG
AAGGGATTAGAA-
A C G T C G T A C G T A A C T G A C T G C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G
G C T A C G T A C T A G C T A G C T A G G T C A C A G T G C A T C G T A C T A G C G T A C G T A A C G T