Information for 18-CGATTTCT (Motif 43)

A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A C G A T A G T C A C T G
p-value:1e-2
log p-value:-5.623e+00
Information Content per bp:1.955
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif233.8
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets104.7 +/- 52.9bp
Average Position of motif in Background104.5 +/- 53.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGATTTCT----
TNNNATGATTTCNNCNN
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGATTTCT-----
NNNCTGATATCTCNNNN
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T G A C C T G A G A T C G C A T C T A G G T C A C A G T G T C A A C G T G T A C C A G T G A T C C A G T T A C G A C G T A G T C

PRDM4/MA1647.1/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGATTTCT-
GTCTGTTTCTA
A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A

ONECUT2/MA0756.1/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CGATTTCT-
ATTATCGATTTTTT
A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T
C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

PRDM1/MA0508.3/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGATTTCT---
TTCTTTCTCTT
A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

MEIS2(var.2)/MA1640.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGATTTCT----
AAATGATTTATGGCT
A C G T A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C G T A C G A T C T A G C G T A C G A T C G A T C A G T T C G A A G C T C A T G C T A G A G T C G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGATTTCT--
TGGTTTCAGT
A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGATTTCT---
KCTATTTTTRGH
A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PBX2/MA1113.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGATTTCT---
NNTGATTTATGNN
A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T A G C G T A C G A T C G A T C A G T T C G A G A C T C A T G C T G A A G T C

MEF2C/MA0497.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGATTTCT-----
TTCTATTTTTAGNNN
A C G T A C G T A G T C A C T G C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T