Information for 18-GGGGACTACC (Motif 39)

A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T C G T A A C T G A C G T A G T C A G T C A G T C A G T C
p-value:1e-3
log p-value:-7.019e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets23.0 +/- 0.0bp
Average Position of motif in Background151.7 +/- 39.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELB/MA1117.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGGGACTACC
NNGGGGAATNC-
A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C
A T G C G T A C A T C G C A T G C A T G C T A G C T G A G C T A G C A T G A C T G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GGGGACTACC--
GGGGATTCCCCC
A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGGGACTACC--
AGGGGAATCCCCT
A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGGACTACC----
AGGGGGATTAGCTGCC
A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGGACTACC-
NGGGGATTTCCC
A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MF0003.1_REL_class/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGGACTACC
GGGGATTTCC
A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGACTACC--
AGGGGAATCCCCT
A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

PH0015.1_Crx/Jaspar

Match Rank:8
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----GGGGACTACC--
CGTTGGGGATTAGCCT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0121.1_Obox1/Jaspar

Match Rank:9
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGGGACTACC---
TTAAGGGGATTAACTAC
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GGGGACTACC---
TGAGGGGGATTAACTAT
A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C T G C G T A A G T C A C G T C G T A A G T C A G T C A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T