Information for 7-ATGTACGAKA (Motif 12)

C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
Reverse Opposite:
C G A T T G A C A C G T A T G C A C T G A C G T C G T A A T G C G T C A A G C T
p-value:1e-9
log p-value:-2.093e+01
Information Content per bp:1.777
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.53%
Number of Background Sequences with motif79.8
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets113.9 +/- 50.4bp
Average Position of motif in Background101.2 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0096.1_Zfp187_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATGTACGAKA--
TTATGTACTAATAA
A C G T A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATGTACGAKA---
ANATTTTACGAGNNNN
A C G T A C G T A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATGTACGAKA------
ATTTACGACAAATAGC
C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

HOXD11/MA0908.1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ATGTACGAKA
NTTTTACGAC-
A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T

HOXC11/MA0651.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGTACGAKA
NTTTTACGACC
A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGTACGAKA
NTTTTACGAGN
A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

HOXA9/MA0594.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGTACGAKA
NNTTTACGAC-
A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
A T G C C T A G C G A T C G A T C G A T C T G A A G T C C A T G C T G A A G T C A C G T

HOXB9/MA1503.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGTACGAKA
NTTTTACGAC-
A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
C T G A C G A T C A G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T

HOXC9/MA0485.2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGTACGAKA
NTTTTACGAC-
A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
C T G A C G A T A C G T A C G T C G A T G T C A A G T C A C T G C T G A A G T C A C G T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATGTACGAKA
NTTTTACGACT
A C G T C T G A A C G T A T C G G C A T C G T A A G T C A T C G C G T A A C T G C G T A
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T