Information for 6-ATCTGGTACA (Motif 27)

C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A G T C A G T C C G T A A C T G C G T A A C G T
p-value:1e-3
log p-value:-7.391e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif18.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets193.0 +/- 0.0bp
Average Position of motif in Background71.7 +/- 75.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TWIST1/MA1123.2/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----ATCTGGTACA
NNACATCTGGNNN-
A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATCTGGTACA
GGTCTGGCAT-
A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

ZBTB12/MA1649.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCTGGTACA-
ATCTGGAACCC
C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A A C G T
T C G A A G C T T A G C A G C T T C A G C A T G T G C A C T G A G A T C G T A C A G T C

HAND2/MA1638.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---ATCTGGTACA
NNCATCTGNN---
A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T A C G T

DMRTC2/MA1479.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATCTGGTACA--
AATTGATACATT
C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A A C G T A C G T
G C T A C G T A G C A T A C G T A T C G G T C A G C A T G T C A A T G C C G T A G C A T C A G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:ATCTGGTACA-
-CCAGGAACAG
C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

DMRTA2/MA1478.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATCTGGTACA--
AATTGTTACATT
C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A A C G T A C G T
G C T A C G T A G C A T A G C T A C T G G C A T G C A T C T G A A G T C C G T A C G A T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATCTGGTACA
CGACCATCTGTT---
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A
G T A C T A C G C T G A G T A C A T G C C G T A A C G T G T A C A C G T A C T G A C G T G A C T A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATCTGGTACA--
-NTTGATACATT
C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A A C G T A C G T
A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----ATCTGGTACA
NNCCATCTGTNNN-
A C G T A C G T A C G T A C G T C G T A A C G T A G T C A C G T A C T G A C T G A C G T C G T A A G T C C G T A
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C A C G T