Information for 12-GACATTATGC (Motif 18)

A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A A C G T C G T A C G T A A C G T A C T G A C G T A G T C
p-value:1e-6
log p-value:-1.578e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets144.5 +/- 56.4bp
Average Position of motif in Background121.0 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLF/MA0043.3/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GACATTATGC-----
-TTGTTATGCAACAA
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T T C A G G C A T C A G T C T G A A G C T C T A G G A T C G T C A C T G A A G T C G T C A C G T A

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GACATTATGC-------
TNNATTATGCATANNTT
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

NFIL3/MA0025.2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GACATTATGC-----
--TATTATGCAATAT
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T C G A G C A T C A G T C T G A G A C T C T A G G A T C G T C A C G T A A G C T G T C A G C A T

NKX6-3/MA1530.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACATTATGC
CTCATTAAA-
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
T A G C A G C T A G T C C G T A A C G T A G C T C T G A G C T A G C T A A C G T

CREB1/MA0018.4/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GACATTATGC
NATGACATCANNN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
C A G T T C G A G C A T A C T G C G T A T A G C T C G A G C A T T G A C G C T A A G C T G T C A C G T A

HOXB8/MA1502.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GACATTATGC
GCAATTAC--
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
A C T G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T A C G T

ATF2/MA1632.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GACATTATGC
NATGACNTCATNN
A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
C T G A T C G A G A C T C A T G C G T A A G T C T G A C C G A T G T A C C T G A A G C T G A C T G C A T

HOXD8/MA0910.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACATTATGC
GCAATTAC--
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
T C A G A G T C T G C A C G T A A C G T C A G T C G T A T G A C A C G T A C G T

HOXA7/MA1498.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACATTATGC
GCAATTAC--
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
A T C G A G T C T G C A G C T A A C G T C A G T C G T A T A G C A C G T A C G T

HOXC4/MA1504.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GACATTATGC
GTCATTAA--
A C T G C G T A A G T C C G T A A C G T A C G T C G T A A C G T A C T G A G T C
T C A G G A C T G T A C C T G A A C G T A C G T C T G A T C G A A C G T A C G T