Information for 6-ACGATGGCAT (Motif 29)

C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A G T C A G T C C G T A A C G T A G T C A C T G A C G T
p-value:1e-3
log p-value:-8.010e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets144.0 +/- 0.0bp
Average Position of motif in Background64.1 +/- 6.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:ACGATGGCAT
-VGCTGGCA-
C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---ACGATGGCAT---
NGTAGGTTGGCATNNN
A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:ACGATGGCAT
-GGTTGGCAT
C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

JUN/MA0488.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ACGATGGCAT
AAGATGATGTCAT
A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C G T A C G T A C T A G T C G A A C G T A C T G C G T A A C G T A T C G G A C T G T A C C G T A A G C T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGATGGCAT
AAACAATGGCA-
A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A A C G T

SOX2/MA0143.4/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ACGATGGCAT
AAACAATGGAA-
A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
C G T A C G T A G C T A G A T C G C T A T C G A C G A T C T A G C T A G C G T A G C T A A C G T

ATF2/MA1632.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ACGATGGCAT-
AAATGAGGTCATT
A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T
C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACGATGGCAT-
AAAGATGATGTCATC
A C G T A C G T A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T
C G T A C T G A C G T A T C A G T C G A A C G T A C T G C G T A A G C T T C A G A G C T T G A C C G T A A G C T T G A C

CREB1/MA0018.4/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACGATGGCAT-
TTATGATGTCATA
A C G T A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T
G C A T C A G T T C G A C G A T A C T G C G T A A G C T A T C G G C A T T G A C C G T A A G C T G T C A

SOX18/MA1563.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-ACGATGGCAT
CACAATGC---
A C G T C G T A A G T C A C T G C G T A A C G T A C T G A C T G A G T C C G T A A C G T
T A G C C T G A A G T C T C G A T G C A A G C T C T A G T A G C A C G T A C G T A C G T