Information for 11-GYACTGTKAM (Motif 17)

A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A
Reverse Opposite:
A C G T A C G T T G A C T G C A A G T C C G T A A T C G A G C T C T A G A G T C
p-value:1e-7
log p-value:-1.693e+01
Information Content per bp:1.775
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif2.97%
Number of Background Sequences with motif716.3
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets89.3 +/- 53.8bp
Average Position of motif in Background96.8 +/- 59.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GYACTGTKAM-
-AGGTGTGAAM
A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A A C G T
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GYACTGTKAM
AAGGTGTKAA
A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GYACTGTKAM---
CAATCACTGGCAGAAT
A C G T A C G T A C G T A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GYACTGTKAM
--CCTGTCAA
A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

TBX6/MA1567.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GYACTGTKAM
GAGGTGTGAA
A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A
C T A G C T G A T A C G T A C G G A C T C T A G G A C T A C T G C T G A C G T A

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GYACTGTKAM
--GCTGTCAA
A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GYACTGTKAM-
-AGGTGTTAAT
A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A A C G T
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GYACTGTKAM
---NTGTCAN
A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GYACTGTKAM
NNNNTGAGCACTGTNNG
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GYACTGTKAM-
NNNANTGCAGTGCNNTT
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C C T G A A T G C A C G T A C T G A C G T A C T G C G T A G T C A A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T