Information for 5-AATWTAAAGCTY (Motif 5)

C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
Reverse Opposite:
C T A G G C T A A C T G T G A C A C G T A G C T A C G T C G T A G C A T C G T A C G A T A C G T
p-value:1e-10
log p-value:-2.494e+01
Information Content per bp:1.779
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif262.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets106.3 +/- 56.1bp
Average Position of motif in Background95.0 +/- 58.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATWTAAAGCTY
NATTCAAAT---
C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:AATWTAAAGCTY-
------AAGCTTG
C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G

PB0019.1_Foxl1_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AATWTAAAGCTY---
TAAATGTAAACAAAGGT
A C G T A C G T C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AATWTAAAGCTY
NGYCATAAAWCH-
A C G T C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AATWTAAAGCTY
TCTTTATATATAAATA
A C G T A C G T A C G T A C G T C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATWTAAAGCTY
TATGTAAATAT-
C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATWTAAAGCTY
WWTRTAAACAVG
C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AATWTAAAGCTY
ACATCAAAGG--
C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Foxl2/MA1607.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATWTAAAGCTY
AATATGTAAACAAA
A C G T A C G T C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
C T G A C G T A C G A T C G T A C G A T C T A G C G A T G T C A G C T A C T G A G A T C G C T A G C T A T C G A

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AATWTAAAGCTY
WWATRTAAACAN-
A C G T C G T A G C T A C G A T C G T A A C G T G T C A C T G A C G T A A C T G G T A C C G A T A G C T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T