Information for 14-CGAGACTGACAC (Motif 20)

A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C C G T A A C T G A C G T A G T C A C G T A G T C A C T G
p-value:1e-3
log p-value:-8.645e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets132.0 +/- 0.0bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF8/MA0652.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CGAGACTGACAC-
TCGAAACCGAAACT
A C G T A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T
G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

IRF4/MA1419.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGAGACTGACAC--
CCGAAACCGAAACTA
A C G T A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T
G A T C G A T C T C A G G T C A C G T A G C T A A T G C G A T C T C A G T G C A C G T A G T C A T A G C G A C T C G T A

IRF9/MA0653.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGAGACTGACAC-
AACGAAACCGAAACT
A C G T A C G T A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T
G C T A G C T A G A T C C T A G T G C A C G T A G T C A T A G C G A T C C T A G G T C A G C T A C G T A T A G C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGAGACTGACAC--
--TGTCTGDCACCT
A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

IRF5/MA1420.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGAGACTGACAC-
CCGAAACCGAAACT
A C G T A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T
G A T C A G T C C A T G C G T A G C T A C T G A G A T C A G T C T C A G T G C A C G T A G T C A T G A C A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CGAGACTGACAC-
---VGCTGWCAVB
A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGAGACTGACAC-
-BTGABTGACAGS
A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGAGACTGACAC-
-NTGATTGACAGN
A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

PKNOX1/MA0782.2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CGAGACTGACAC---
TTTGAGTGACAGCTA
A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T
C G A T G C A T C G A T T C A G C T G A A C T G C G A T A T C G C T G A G A T C C G T A A C T G T A G C A G C T C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGAGACTGACAC-
-GAAACTGAAACT
A G T C A C T G C G T A A C T G C G T A A G T C A C G T A C T G C G T A A G T C C G T A A G T C A C G T
A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T