Information for 1-CCTCCAGGACAC (Motif 1)

A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T A C T G A C G T A G T C A T G C A C G T A C T G A C T G C T G A A C T G A C T G
p-value:1e-18
log p-value:-4.313e+01
Information Content per bp:1.910
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif18.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets110.9 +/- 49.5bp
Average Position of motif in Background105.1 +/- 65.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB26/MA1579.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTCCAGGACAC--
TACTCCAGAAAAGAT
A C G T A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C A C G T A C G T
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTCCAGGACAC
-NTCAAGGTCA-
A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTCCAGGACAC
--CCAGGAACAG
A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCTCCAGGACAC
-BTCAAGGTCA-
A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Wt1/MA1627.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCTCCAGGACAC
CCCCTCCCCCACAC
A C G T A C G T A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
G A T C A G T C G T A C T A G C C A G T A T G C A G T C A G T C G T A C A T G C C T G A A T G C T G C A A G T C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCTCCAGGACAC
NGGCCTCCCAGGGAG
A C G T A C G T A C G T A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
G C T A A C T G T C A G G A T C A G T C G A C T A G T C G T A C G A T C C T G A T A C G C T A G T C A G C G T A A T C G

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCTCCAGGACAC
----AAGGTCAC
A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

ESRRA/MA0592.3/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCTCCAGGACAC-
GCTCAAGGTCACA
A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C A C G T
C A T G A G T C G A C T T A G C C T G A T C G A C A T G C A T G C G A T A G T C C T G A G A T C T C G A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTCCAGGACAC
NBYCAAGGTCAC
A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CCTCCAGGACAC
TGCCCNNAGGGCA-
A C G T A C G T A G T C A G T C A G C T A G T C A G T C C G T A A T C G T C A G C G T A A G T C C G T A A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T