Information for 7-TGGATAGACG (Motif 15)

A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C G T C G T A A C G T A G T C A G T C C G T A
p-value:1e-3
log p-value:-8.478e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets83.0 +/- 0.0bp
Average Position of motif in Background128.8 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGATAGACG
TGTCTAGACG
A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

ZSCAN29/MA1602.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGATAGACG
NCNGTGTAGACG
A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
A T G C G A T C A G T C T A C G A G C T C T A G C A G T C T G A A C T G T C G A A G T C T C A G

SMAD5/MA1557.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGGATAGACG
TGTCTAGACA
A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C G A T C T A G C A G T A T G C A C G T T G C A A C T G G T C A A G T C C T G A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGATAGACG
ATGMATATDC-
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGGATAGACG
GTGGAT-----
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGGATAGACG
AATGGAAAAT--
A C G T A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGGATAGACG---
---CCAGACRSVB
A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGATAGACG-
TTTGATTGATGN
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G A C G T
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

DMRT3/MA0610.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGATAGACG
NTTGATACATT
A C G T A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

Smad4/MA1153.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGATAGACG
--TCTAGACA
A C G T A C T G A C T G C G T A A C G T C G T A A C T G C G T A A G T C A C T G
A C G T A C G T A C G T A G T C A G C T C G T A A C T G C G T A A G T C C T G A