Information for 23-CACGGGTGCA (Motif 40)

A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C G T A A G T C A G T C A G T C A C T G A C G T A C T G
p-value:1e-2
log p-value:-6.151e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.19%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.4 +/- 36.9bp
Average Position of motif in Background63.2 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CACGGGTGCA
CACGTGTGCH
A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A
A G T C C G T A A G T C C T A G A C G T A C T G A C G T C A T G A G T C G A C T

SNAI3/MA1559.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CACGGGTGCA
AACAGGTGCA
A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A
C T G A C T G A G A T C C T G A C T A G A T C G A C G T C T A G A G T C T C G A

SNAI2/MA0745.2/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CACGGGTGCA-
NNGACAGGTGCNN
A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A A C G T
T C G A A G C T C A T G T C G A A T G C T C G A T A C G T A C G G A C T C T A G A G T C T C G A A G C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CACGGGTGCA----
GGGCCGTGTGCAAAAA
A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

MYOD1/MA0499.2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CACGGGTGCA-
NNGACAGGTGCNN
A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A A C G T
T C A G C A T G T C A G T C G A T A G C T C G A A T C G T A C G G A C T A T C G A T G C G C A T T A C G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACGGGTGCA----
ATCCACAGGTGCGAAAA
A C G T A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A A C G T A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

Mlxip/MA0622.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CACGGGTGCA
GCACGTGT---
A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CACGGGTGCA
GGCACGTGTC--
A C G T A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T A C G T

SNAI1/MA1558.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACGGGTGCA
GGCAGGTGCA
A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A
C T A G C T A G G T A C G C T A T C A G C T A G C A G T C T A G A G T C C T G A

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACGGGTGCA-
NNACAGGTGTNN
A C G T A G T C C G T A A G T C A C T G A C T G A C T G A C G T A C T G A G T C C G T A A C G T
C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T