Information for 18-SATCATGCTT (Motif 31)

A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T
Reverse Opposite:
G C T A C G T A A T C G A G T C C G T A A C G T C T A G C G T A C G A T A T C G
p-value:1e-4
log p-value:-1.024e+01
Information Content per bp:1.871
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif256.3
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets108.5 +/- 67.4bp
Average Position of motif in Background100.7 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:SATCATGCTT
---CAAGCTT
A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--SATCATGCTT-----
TNNATTATGCATANNTT
A C G T A C G T A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---SATCATGCTT--
ATGCATWATGCATRW
A C G T A C G T A C G T A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T A C G T A C G T
C G T A A C G T A C T G G T A C C G T A A C G T C G T A C G T A A C G T A C T G A G T C C G T A A C G T C T G A G C A T

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----SATCATGCTT-
TAGTGATCATCATTA
A C G T A C G T A C G T A C G T A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T A C G T
G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--SATCATGCTT
TGAATTATGCAT
A C G T A C G T A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----SATCATGCTT
NNCTNAATTATGANN
A C G T A C G T A C G T A C G T A C G T A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T
G A C T G A T C A T G C A C G T G C A T C T G A C G T A C G A T A C G T G T C A G A C T T C A G G C T A C G A T G C T A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SATCATGCTT------
NGTCACGCTTGGCTGC
A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:SATCATGCTT
GAATATTCAT
A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-SATCATGCTT
ACATCCTGNT-
A C G T A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

PAX6/MA0069.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:SATCATGCTT-----
-TTCACGCATGAGTT
A T G C C G T A C G A T A G T C C G T A A C G T C T A G A T G C A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T