Information for 12-AGCCAGGCGT (Motif 30)

C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C A G T C A C G T A C T G A C T G A G T C A C G T
p-value:1e-3
log p-value:-7.277e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 0.0bp
Average Position of motif in Background64.4 +/- 55.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AGCCAGGCGT---
SCAGYCADGCATGAC
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AGCCAGGCGT----
GCAGCCAAGCGTGACN
A C G T A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGCCAGGCGT
--CNAGGCCT
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

Rbpjl/MA1621.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGGCGT---
NNNACAGGTGTNNN
A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T A C G T
T C A G C T A G T A C G T C G A T A G C T C G A A T C G T A C G G A C T C A T G A G C T A C G T A G T C T A C G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCCAGGCGT
ATGCCAGACN-
A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

Ptf1a(var.3)/MA1620.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AGCCAGGCGT--
NNACAGGTGTNN
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T
C T A G T G A C T C G A T G A C T G C A A T C G T A C G G C A T A C T G A G C T A C T G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCCAGGCGT-
-NNCAGGTGNN
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZEB2(Zf)/SNU398-ZEB2-ChIP-Seq(GSE103048)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCCAGGCGT--
GNMCAGGTGTGC
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T
C T A G A C T G T G C A A G T C C G T A A C T G A C T G A C G T C T A G C G A T T A C G A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCCAGGCGT
--CTAGGCCT
C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCCAGGCGT--
CATCCAGATGTTC
A C G T C G T A A C T G A G T C A G T C C G T A A C T G A C T G A G T C A C T G A C G T A C G T A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C