Information for 8-ATGGWCCATG (Motif 20)

C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G
Reverse Opposite:
A G T C G C T A C G A T A C T G C T A G C G T A A G T C A G T C C G T A G C A T
p-value:1e-7
log p-value:-1.779e+01
Information Content per bp:1.699
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif1100.5
Percentage of Background Sequences with motif2.29%
Average Position of motif in Targets111.2 +/- 52.0bp
Average Position of motif in Background99.5 +/- 60.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4A/MA0114.4/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATGGWCCATG--
NNTGGACTTTGNN
A C G T C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G A C G T A C G T
G A C T G A C T G C A T C T A G C T A G G T C A T G A C G A C T A G C T A C G T C T A G C T A G G T C A

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATGGWCCATG--
NNTGGACTTTGNN
A C G T C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G A C G T A C G T
G A C T A G T C G C A T C T A G C T A G G T C A T G A C G A C T A G C T A G C T C T A G T C A G G T C A

BACH2/MA1101.2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----ATGGWCCATG----
NAANGATGAGTCATGNTTN
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G A C G T A C G T A C G T A C G T
C T G A C G T A C G T A A G C T T A C G T C G A A G C T C A T G T G C A A T C G A C G T G T A C C T G A A G C T C A T G T A G C G C A T G C A T G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATGGWCCATG-------
-TGGACTTTGNNCTNTG
C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

MEIS1(var.2)/MA1639.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGWCCATG--
NNTGATTGATGNN
A C G T C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G A C G T A C G T
C G T A C G T A C G A T C A T G C G T A C G A T C A G T C A T G G T C A G A C T C T A G C T G A G A T C

NFE2/MA0841.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATGGWCCATG
GATGAGTCATN
A C G T C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGGWCCATG-
-TGATTGATGA
C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

JDP2/MA0655.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGGWCCATG
ATGACTCAT-
C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G
T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGGWCCATG--
ATGATKGATGRC
C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G A C G T A C G T
C T G A C G A T A T C G C G T A C G A T C A G T C T A G C G T A C G A T A C T G C T G A A T G C

FOSL1::JUND/MA1142.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGGWCCATG
GATGACTCAT-
A C G T C G T A A C G T A C T G C T A G G C A T G A T C T G A C G C T A C G A T A C T G
C T A G T C G A C A G T A C T G C T G A A T G C C A G T G T A C G T C A G A C T A C G T