Information for 7-CCTAAYKATCTT (Motif 10)

G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
Reverse Opposite:
C T G A C G T A A C T G C G T A C A G T T G A C C T A G A G C T A C G T C T G A C A T G A C T G
p-value:1e-4
log p-value:-1.100e+01
Information Content per bp:1.658
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif60.00%
Number of Background Sequences with motif5290.5
Percentage of Background Sequences with motif6.83%
Average Position of motif in Targets67.4 +/- 48.8bp
Average Position of motif in Background100.4 +/- 73.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCTAAYKATCTT
-CTAATCCTCTT
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAYKATCTT-
NNNACCTCATTATCNTN
A C G T A C G T A C G T A C G T G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

HOXB4/MA1499.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCTAAYKATCTT
-NTAATGAT---
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
A C G T A G T C A G C T G T C A C G T A A G C T A C T G C T G A A G C T A C G T A C G T A C G T

MEOX1/MA0661.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTAAYKATCTT
GCTAATTAAC--
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTAAYKATCTT
NNTAATTANN--
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T

HOXA4/MA1496.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTAAYKATCTT
-NTAATGAC---
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
A C G T A G T C A G C T T C G A G T C A A G C T A C T G C T G A A G T C A C G T A C G T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCTAAYKATCTT-
GCAACCTCATTATNNNN
A C G T A C G T A C G T A C G T G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

PH0050.1_Hoxa3/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCTAAYKATCTT--
ACTAATTANCNCNA
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T A C G T A C G T
T C G A A G T C G A C T G T C A C G T A A C G T A C G T C T G A T A G C A G T C C A G T A G T C T C G A G T C A

HOXD4/MA1507.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTAAYKATCTT
-NTAATGAN---
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
A C G T G A T C A G C T C G T A C G T A A G C T A C T G C T G A A G C T A C G T A C G T A C G T

Dlx1/MA0879.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTAAYKATCTT
CCTAATTATC--
G T A C G T A C A G C T G T C A C T G A G A T C A C T G G C T A C G A T G T A C G A C T A G C T
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C A C G T A C G T