Information for 25-AACATAGGCAGA (Motif 29)

C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C G T A C T G A C G T A C G T
p-value:1e-3
log p-value:-8.581e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets107.0 +/- 0.0bp
Average Position of motif in Background138.4 +/- 40.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AACATAGGCAGA
AAAACAAAGAA---
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACATAGGCAGA
AAAACAAAGG----
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

SOX4/MA0867.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AACATAGGCAGA
GAACAAAGGG---
A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
C T A G T C G A C G T A A T G C T C G A T C G A G C T A C T A G T C A G T C A G A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AACATAGGCAGA
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AACATAGGCAGA
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

BHLHE22/MA0818.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AACATAGGCAGA
ACCATATGTT--
C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACATAGGCAGA
GGAACAAAGR----
A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACATAGGCAGA
AAACATATGTTT-
A C G T C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACATAGGCAGA
AACATATGTT--
C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AACATAGGCAGA
AACATATGTT--
C G T A C G T A A G T C C G T A A C G T C G T A A C T G A C T G A G T C C G T A A C T G C G T A
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T A C G T