Information for 21-CTGCCACAGA (Motif 33)

A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C G T A C T G A C T G A G T C C G T A A C T G
p-value:1e-1
log p-value:-4.263e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif42.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets101.0 +/- 52.0bp
Average Position of motif in Background96.5 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)3.7
Multiplicity (# of sites on avg that occur together)3.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGCCACAGA-
AAACCACAGAN
A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

ZFP57/MA1583.1/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CTGCCACAGA
GCATTGCCGCAGT
A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A
A T C G A T G C T C G A A C G T A C G T A T C G G A T C T A G C C T A G A T G C T C G A T A C G A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGCCACAGA-
NWAACCACADNN
A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGCCACAGA
-TGCCAGCB-
A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A
A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTGCCACAGA-
MCTCCCMCRCAB
A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C G T
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTGCCACAGA
----CACAGN
A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGCCACAGA
NANTGCSGCA--
A C G T A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A
G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A A C G T A C G T

ZNF75D/MA1601.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCACAGA
TTTCCCACAN-
A C G T A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A
G A C T A G C T C A G T T A G C G T A C A G T C C T G A A G T C G T C A A G C T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGCCACAGA
TTGCCAAG--
A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGCCACAGA-
-TTCCKNAGAA
A G T C A C G T A C T G A G T C A G T C C G T A A G T C C G T A A C T G C G T A A C G T
A C G T G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A