Information for 3-CACACATAGGAA (Motif 3)

A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
Reverse Opposite:
A C G T A C G T A T G C G T A C C G A T C G T A A C G T A C T G A C G T C T A G A C G T A C T G
p-value:1e-13
log p-value:-3.158e+01
Information Content per bp:1.883
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif25.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets105.8 +/- 60.7bp
Average Position of motif in Background120.7 +/- 76.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CACACATAGGAA-
AAACAGACAAAGGAAT
A C G T A C G T A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

ZSCAN4/MA1155.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CACACATAGGAA-
TGCACACACTGAAAA
A C G T A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CACACATAGGAA
TCACACCT-----
A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CACACATAGGAA
CTTCACACCTA----
A C G T A C G T A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACACATAGGAA
TCACACCT-----
A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CACACATAGGAA
TTCACACCTT----
A C G T A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CACACATAGGAA----
-CCGCATAGCAACGGA
A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CACACATAGGAA
NTTTTCACACCTT----
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACACATAGGAA
TCACACCT-----
A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACACATAGGAA
TCACACCT-----
A C G T A G T C C G T A A G T C C G T A G T A C C G T A A C G T C G T A C A T G A T C G C G T A G T C A
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T