Information for 24-GCCAGATCAA (Motif 38)

A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A A C G T A G T C A C G T A C T G A C T G A G T C
p-value:1e-2
log p-value:-6.815e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif41.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets86.0 +/- 0.0bp
Average Position of motif in Background87.0 +/- 102.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGATCAA
ATGCCAGACN--
A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Tcf7(HMG)/GM12878-TCF7-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCCAGATCAA--
VSCACATCAAAG
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T
T G C A A T G C T G A C C G T A A T G C C G T A C G A T T A G C C G T A C T G A C T G A T C A G

PB0040.1_Lef1_1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCAGATCAA-------
NANAGATCAAAGGGNNN
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCCAGATCAA-------
NNNAGATCAAAGGANNN
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCAGATCAA-
-HNRAATCAAT
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T
A C G T G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCAGATCAA------
-AAAGATCAAAGGGTT
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCAGATCAA---
---DGATCRATAN
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCAGATCAA---
---ASATCAAAGG
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G

PB0083.1_Tcf7_1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCAGATCAA-------
TATAGATCAAAGGAAAA
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCCAGATCAA-------
TATAGATCAAAGGAAAA
A C T G A G T C A G T C C G T A A C T G C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A