Information for 18-GTAAGTTCATTC (Motif 18)

A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A A C G T A C T G C G T A C G T A A G T C A C G T A C G T C G T A A G T C
p-value:1e-4
log p-value:-1.074e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets176.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTAAGTTCATTC
-AAAGTTCAT--
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C
A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTAAGTTCATTC
-TGAGTTCA---
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C
A C G T G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T

NR1H4/MA1110.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTAAGTTCATTC-
--NAGGTCATTGA
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T
A C G T A C G T C G A T T C G A C A T G C A T G A C G T G A T C T C G A A G C T G C A T T C A G T G C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GTAAGTTCATTC-----
-NNCATTCATTCATNNN
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0169.1_Sox15_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTAAGTTCATTC--
TNGAATTTCATTNAN
A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GTAAGTTCATTC
CAAAGKTCAA--
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A A C G T A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTAAGTTCATTC-
-TAATTNVATTAN
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T
A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

PHOX2B/MA0681.2/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GTAAGTTCATTC--
NNATAATTTGATTANN
A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C A C G T A C G T
C G T A C G A T G C T A G C A T C G T A G C T A G C A T C G A T C G A T C T A G C G T A G C A T G C A T C G T A C G T A G C T A

PROP1/MA0715.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTAAGTTCATTC
-TAATTAAATTA
A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C
A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTAAGTTCATTC
CAGGTAAGTAT----
A C G T A C G T A C G T A C T G A C G T C G T A C G T A A C T G A C G T A C G T A G T C C G T A A C G T A C G T A G T C
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T A C G T A C G T A C G T