Information for 20-CACTGTGTGT (Motif 34)

A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T
Reverse Opposite:
C T G A A G T C T C G A A G T C T G C A A T G C T C G A T A C G C A G T T C A G
p-value:1e-3
log p-value:-7.375e+00
Information Content per bp:1.656
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif8.64%
Number of Background Sequences with motif2861.0
Percentage of Background Sequences with motif5.93%
Average Position of motif in Targets92.3 +/- 51.5bp
Average Position of motif in Background99.0 +/- 65.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN4/MA1155.1/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----CACTGTGTGT-
TTTTCAGTGTGTGCA
A C G T A C G T A C G T A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CACTGTGTGT-
NNNCCATTGTGTNAN
A C G T A C G T A C G T A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CACTGTGTGT----
NNGCGTGTGTGCNGCN
A C G T A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T A C G T A C G T A C G T A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

SOX13/MA1120.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTGTGT
NNCCATTGTNN--
A C G T A C G T A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CACTGTGTGT
NNCCATTGTNN--
A C G T A C G T A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACTGTGTGT
CTCATTGTC---
A C G T A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CACTGTGTGT----
CCATTGTATGCAAAT
A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T A C G T A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

SOX18/MA1563.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACTGTGTGT
GCATTGTN---
A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T
A T C G A G T C C T G A A C G T A G C T A C T G G A C T A T C G A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACTGTGTGT
-GCTGTG---
A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CACTGTGTGT-
CAATGCATTGTGGGTA
A C G T A C G T A C G T A C G T A C G T A G T C G T C A A T G C A G C T T A C G A C G T T C A G A G C T T C A G G A C T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A