Information for 13-ATGAAAACTCCA (Motif 17)

C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A G T C C G T A A C G T
p-value:1e-4
log p-value:-9.655e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif14.29%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATGAAAACTCCA----
GGCAAAAGTCCAATAA
C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATGAAAACTCCA
ATGAATATTC--
C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

POU5F1/MA1115.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATGAAAACTCCA
ATATGCAAATT---
A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A
C G T A G C A T T C G A G A C T C T A G A G T C G C T A C T G A G C T A G C A T C A G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATGAAAACTCCA
--GGAAATTCCC
C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

HNF4A/MA0114.4/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATGAAAACTCCA--
-TCCAAAGTCCAAA
C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A A C G T A C G T
A C G T C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAACTCCA
GGYAATGAAA------
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A
C T A G T A C G G A C T T G C A T G C A C G A T T A C G C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ATGAAAACTCCA
AATGGAAAAT---
A C G T C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

HNF4G/MA0484.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ATGAAAACTCCA--
-TCCAAAGTCCAGA
C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A A C G T A C G T
A C G T C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ATGAAAACTCCA
GGCMATGAAA------
A C G T A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A
C T A G T A C G G A T C G T C A T C G A A C G T T C A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATGAAAACTCCA---
GAAAAAATTGCAAGG
C G T A A C G T A C T G C G T A C G T A C G T A C G T A A G T C A C G T A G T C A G T C C G T A A C G T A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G