Information for 4-TCCATAGTAC (Motif 12)

A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C T G G T C A
p-value:1e-9
log p-value:-2.271e+01
Information Content per bp:1.945
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif20.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets123.7 +/- 59.6bp
Average Position of motif in Background68.7 +/- 55.8bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX2/MA0143.4/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCCATAGTAC
NNCCATTGTNN
A C G T A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T

SOX13/MA1120.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCATAGTAC
NNCCATTGTNN
A C G T A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TCCATAGTAC-------
TTCNAAGTACTTNNNNN
A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TCCATAGTAC---
TATCATTAGAACGCT
A C G T A C G T A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCCATAGTAC
-CCATTGTTC
A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCCATAGTAC
NCCATTGTTC
A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

HNF4G/MA0484.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCATAGTAC---
TCCAAAGTCCAGA
A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCATAGTAC---
TCCAAAGTCCAAA
A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCATAGTAC-
-CCATTGTTYB
A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TCCATAGTAC---
-CCATTGTTYYBB
A C G T A G T C G T A C C G T A A C G T C G T A A C T G A C G T C G T A A G T C A C G T A C G T A C G T
A C G T A T G C G A T C C G T A A C G T A C G T A C T G A C G T A G C T A G C T A G T C A T C G A C T G