Information for 5-ACAGTATTTACA (Motif 5)

C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A
Reverse Opposite:
G A C T A T C G A C G T C G T A T C G A C G T A A C G T G C T A A T G C C G A T A T C G C G A T
p-value:1e-4
log p-value:-9.999e+00
Information Content per bp:1.682
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif45.45%
Number of Background Sequences with motif3449.6
Percentage of Background Sequences with motif4.14%
Average Position of motif in Targets107.8 +/- 43.7bp
Average Position of motif in Background99.6 +/- 80.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0176.1_Sox5_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACAGTATTTACA-
TATCATAATTAAGGA
A C G T A C G T C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACAGTATTTACA
-TCCAATCCACA
C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

ZBTB32/MA1580.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---ACAGTATTTACA
TGTACAGTAT-----
A C G T A C G T A C G T C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A
G C A T C T A G C G A T G T C A A T G C C G T A A C T G A G C T C T G A C G A T A C G T A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACAGTATTTACA
AACAGGAAGT---
A C G T C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACAGTATTTACA-
GVACAGNMTGTYCTB
A C G T A C G T C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A A C G T
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACAGTATTTACA
-NDGTAATTAC-
C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A
A C G T T C G A C A G T A C T G A G C T C G T A C G T A A C G T A C G T C T G A T A G C A C G T

PH0062.1_Hoxb7/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACAGTATTTACA--
TNNCATTAATTANTNC
A C G T A C G T C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A A C G T A C G T
A G C T C G A T T A C G G T A C T G C A A C G T G A C T G T C A G C T A C G A T C A G T C T G A T G A C A C G T T C G A T A G C

FOXB1/MA0845.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:ACAGTATTTACA--
---ATATTTACATA
C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A A C G T A C G T
A C G T A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

PH0072.1_Hoxc8/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACAGTATTTACA----
ACNNTAATTACNNCAN
C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A A C G T A C G T A C G T A C G T
T G C A G T A C C T A G C A G T G A C T G T C A G C T A C A G T C A G T C T G A G T A C A G T C G A T C G T A C C G T A T G C A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGTATTTACA
ANCAGGATGT---
A C G T C G T A A T G C C G T A A T C G C G A T C G T A C G A T A G C T G A C T C G T A A T G C C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T