Information for 7-GGCATCTAGCGT (Motif 12)

A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
Reverse Opposite:
C G T A A G T C A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C T G A G T C A G T C
p-value:1e-3
log p-value:-9.177e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets127.0 +/- 0.0bp
Average Position of motif in Background108.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HAND2/MA1638.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCATCTAGCGT
NNCATCTGNN--
A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T A C G T A C G T

TWIST1/MA1123.2/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCATCTAGCGT
NNACATCTGGNNN
A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCATCTAGCGT
NGTGGGCAT-------
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCATCTAGCGT-
CCNNACCATCTGGCCTN
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCATCTAGCGT---
-TCAGNGAGCGTGAC
A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGCATCTAGCGT
GGTTGGCAT-------
A C G T A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCATCTAGCGT
GCCAGCTGBTNB
A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GGCATCTAGCGT
SMCATCTGKH--
A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T A C G T A C G T

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GGCATCTAGCGT----
-GGNTCTCGCGAGAAC
A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GGCATCTAGCGT
GCNGCCATCTTG---
A C G T A C G T A C G T A C T G A C T G A G T C C G T A A C G T A G T C A C G T C G T A A C T G A G T C A C T G A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T