| p-value: | 1e-3 |
| log p-value: | -7.028e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 6.7 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 121.0 +/- 0.0bp |
| Average Position of motif in Background | 105.8 +/- 84.3bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
NR1I3/MA1534.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.69 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -TAGTTCAGCC AAAGTTCAT-- |
|
|
|
VDR/MA0693.2/Jaspar
| Match Rank: | 2 |
| Score: | 0.66 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -TAGTTCAGCC TGAGTTCA--- |
|
|
|
RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer
| Match Rank: | 3 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --TAGTTCAGCC CAAAGKTCAA-- |
|
|
|
HMBOX1/MA0895.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --TAGTTCAGCC ACTAGTTAAC-- |
|
|
|
POL010.1_DCE_S_III/Jaspar
| Match Rank: | 5 |
| Score: | 0.60 |
| Offset: | 5 |
| Orientation: | forward strand |
| Alignment: | TAGTTCAGCC -----CAGCC |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -6 |
| Orientation: | forward strand |
| Alignment: | ------TAGTTCAGCC TATAAGTAGGTCAA-- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 7 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAGTTCAGCC AAYTAGGTCA--- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 8 |
| Score: | 0.57 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---TAGTTCAGCC AAYTAGGTCA--- |
|
|
|
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 9 |
| Score: | 0.57 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----TAGTTCAGCC WAABTAGGTCAV-- |
|
|
|
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
| Match Rank: | 10 |
| Score: | 0.57 |
| Offset: | 4 |
| Orientation: | reverse strand |
| Alignment: | TAGTTCAGCC-- ----BCAGACWA |
|
|
|