| p-value: | 1e-6 |
| log p-value: | -1.426e+01 |
| Information Content per bp: | 1.743 |
| Number of Target Sequences with motif | 4.0 |
| Percentage of Target Sequences with motif | 33.33% |
| Number of Background Sequences with motif | 418.7 |
| Percentage of Background Sequences with motif | 0.61% |
| Average Position of motif in Targets | 128.8 +/- 36.4bp |
| Average Position of motif in Background | 97.4 +/- 85.9bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer
| Match Rank: | 1 |
| Score: | 0.65 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | SASAASMMCWYA- ---AAGCACTTAA |
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|
|
PB0120.1_Foxj1_2/Jaspar
| Match Rank: | 2 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----SASAASMMCWYA ATGTCACAACAACAC- |
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|
|
Nkx3-2/MA0122.3/Jaspar
| Match Rank: | 3 |
| Score: | 0.61 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | SASAASMMCWYA-- -ATAACCACTTAAA |
|
|
|
PH0004.1_Nkx3-2/Jaspar
| Match Rank: | 4 |
| Score: | 0.60 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | SASAASMMCWYA----- CATAACCACTTAACAAC |
|
|
|
PB0122.1_Foxk1_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.59 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --SASAASMMCWYA- CAAACAACAACACCT |
|
|
|
OSR2/MA1646.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.59 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---SASAASMMCWYA AAACAGAAGCAG--- |
|
|
|
PB0208.1_Zscan4_2/Jaspar
| Match Rank: | 7 |
| Score: | 0.56 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | SASAASMMCWYA----- -CGAAGCACACAAAATA |
|
|
|
Nkx2-5(var.2)/MA0503.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.56 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | SASAASMMCWYA-- ---AGCCACTCAAG |
|
|
|
Nkx3-1/MA0124.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.55 |
| Offset: | 4 |
| Orientation: | forward strand |
| Alignment: | SASAASMMCWYA- ----ACCACTTAA |
|
|
|
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
| Match Rank: | 10 |
| Score: | 0.53 |
| Offset: | 3 |
| Orientation: | forward strand |
| Alignment: | SASAASMMCWYA- ---AASCACTCAA |
|
|
|