Information for 10-CAAACTATAGAA (Motif 11)

A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G
p-value:1e-3
log p-value:-8.871e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets164.0 +/- 0.0bp
Average Position of motif in Background112.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX9/MA0077.1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAAACTATAGAA
-GAACAATGG--
A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T A C G T

PB0073.1_Sox7_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CAAACTATAGAA-----
AATAAAGAACAATAGAATTTCA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

POL012.1_TATA-Box/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAAACTATAGAA-------
----GTATAAAAGGCGGGG
A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CAAACTATAGAA-------
----GTATAAAAGGCGGGG
A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0066.1_Sox17_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAAACTATAGAA--
ATAAACAATTAAACA
A C G T A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

MEF2A/MA0052.4/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAAACTATAGAA-
TTCTAAAAATAGAAA
A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T
C G A T C A G T G A T C G A C T C G T A C G T A C G T A C G T A C G T A G C A T C T G A C T A G G T C A G C T A G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAACTATAGAA
VRAACAATGG--
A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAAACTATAGAA----
NAAANTTATTGAANCAN
A C G T A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAAACTATAGAA--
TAGTGAACAATAGATTT
A C G T A C G T A C G T A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CAAACTATAGAA
AAAACAATAG--
A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T