Information for 9-TTTACAGACG (Motif 20)

A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A G T C A C G T A C T G A C G T C G T A C G T A C G T A
p-value:1e-3
log p-value:-7.775e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.67%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background33.7 +/- 40.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TTTACAGACG---
---CCAGACRSVB
A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTACAGACG----
TTTGCACACGGCAC
A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTACAGACG----
NNTTTGCACACGGCCC
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Foxl2/MA1607.1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGACG
NNTGTTTACATANN
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G
A G C T C G A T C G A T C T A G G A C T C G A T C A G T G C T A G A T C G C T A G C A T G C T A G C A T G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTTACAGACG-
---CCAGACAG
A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

HAND2/MA1638.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TTTACAGACG--
--ACCAGATGGC
A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G A C G T A C G T
A C G T A C G T C T G A T G A C A T G C T C G A A C T G T C G A A G C T T C A G A C T G G A T C

FOXB1/MA0845.1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTACAGACG
ATATTTACATA--
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTTACAGACG
CNTGTTTACATA--
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A A C G T A C G T

FOXA2/MA0047.3/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTTACAGACG
NNTGTTTACAT---
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G
G C A T C G T A C G A T T C A G C G A T C A G T C A G T C G T A G A T C G C T A G A C T A C G T A C G T A C G T

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTTACAGACG
TGTTTACH----
A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A A C T G C G T A A G T C A C T G
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T A C G T A C G T