Information for 2-TCCATTGAKTGK (Motif 2)

A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
Reverse Opposite:
T G A C A G T C G T C A G T A C A G C T T A G C G C T A T C G A A C G T C T A G A C T G C T G A
p-value:1e-5
log p-value:-1.296e+01
Information Content per bp:1.664
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif55.56%
Number of Background Sequences with motif2465.0
Percentage of Background Sequences with motif2.90%
Average Position of motif in Targets122.3 +/- 48.0bp
Average Position of motif in Background101.2 +/- 73.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCCATTGAKTGK
ATTTTCCATT------
A C G T A C G T A C G T A C G T A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SOX2/MA0143.4/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTGAKTGK
NNCCATTGTNN--
A C G T A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
C G A T G C A T G A T C G A T C G C T A A G C T C G A T C T A G C G A T G C A T G C A T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCCATTGAKTGK
-CCATTGTTYB-
A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCCATTGAKTGK
NNCATTCATTCATNNN
A C G T A C G T A C G T A C G T A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCATTGAKTGK----
-CCATTGTATGCAAAT
A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCCATTGAKTGK
ATCCAC-------
A C G T A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC4/MA1525.1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TCCATTGAKTGK
ATTTTCCATN------
A C G T A C G T A C G T A C G T A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
C G T A A C G T C A G T A C G T A C G T A G T C A G T C C T G A G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCCATTGAKTGK
NNCCATTGTNN--
A C G T A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
C G A T A C T G A G T C G A T C C G T A G A C T C G A T T C A G G A C T A G C T G A C T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCCATTGAKTGK
-CCATTGTTC--
A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

ZSCAN4/MA1155.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCATTGAKTGK-
TTTTCAGTGTGTGCA
A C G T A C G T A G C T G T A C A G T C G T C A A C G T C A G T A C T G C T G A C A T G A C G T A C T G A C G T A C G T
G A C T G A C T C A G T G C A T T G A C T G C A C A T G A C G T C T A G G A C T A C T G C G A T A T C G A G T C C T G A