Information for 2-TGGCCCACCAGC (Motif 2)

A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C T G A C T G A C G T C T A G A C T G A C T G A G T C G T A C C G T A
p-value:1e-13
log p-value:-3.127e+01
Information Content per bp:1.919
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets144.7 +/- 14.5bp
Average Position of motif in Background110.9 +/- 54.1bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCF3/MA0522.3/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGGCCCACCAGC--
---CGCACCTGCCC
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A T G C T C G A A T G C T A G C A G C T T C A G A G T C T A G C A T G C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGGCCCACCAGC--
CATAAGACCACCATTAC
A C G T A C G T A C G T A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

TCF12(var.2)/MA1648.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGGCCCACCAGC--
---CGCACCTGCCG
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T A G C T A C G A G T C T C G A A T G C T A G C A G C T T C A G A G T C A G T C A T C G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGGCCCACCAGC--
--SNGCACCTGCHS
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZEB1/MA0103.3/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TGGCCCACCAGC--
---CCCACCTGCGC
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A T G C A G T C C T G A A G T C T A G C A G C T T C A G A T G C T A C G A T G C

ASCL1(var.2)/MA1631.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGGCCCACCAGC---
--CAGCACCTGCCCC
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C G T A T A C G A T G C C T G A A T G C T A G C A G C T T A C G A T G C G A T C A T G C A T G C

SNAI1/MA1558.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TGGCCCACCAGC-
---NGCACCTGCN
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T G A C T T C A G G A T C G T C A G A T C A G T C C G A T C A T G G A T C G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGCCCACCAGC-
-GGACCACCCACG
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGGCCCACCAGC-
---NNCACCTGNN
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Snail1(Zf)/LS174T-SNAIL1.HA-ChIP-Seq(GSE127183)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGGCCCACCAGC-
---TRCACCTGCY
A C G T A C T G A C T G G T A C A G T C A G T C C G T A A G T C A G T C C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A G C T T C G A G T A C T C G A A T G C A T G C G C A T A T C G A G T C A G C T