Information for 9-AGTATCACGC (Motif 18)

C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A C T G C G T A A C G T C G T A A G T C C G A T
p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.941
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets98.0 +/- 59.5bp
Average Position of motif in Background90.4 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.73
Offset:5
Orientation:reverse strand
Alignment:AGTATCACGC-
-----CACGCA
C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:AGTATCACGC--
--TBGCACGCAA
C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

DMRT3/MA0610.1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGTATCACGC
AATGTATCAAT-
A C G T A C G T C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGTATCACGC---
-NHRTCACGACDN
C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T T C A G G C T A T C A G C A G T T G A C G T C A A G T C A T C G T G C A G T A C C A G T G A T C

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:AGTATCACGC
--AGTCACGC
C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGTATCACGC--
GATGGGGTATCATTTTT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGTATCACGC---
---ATCACCCCAT
C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T

PH0162.1_Six2/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AGTATCACGC--
AATGGGGTATCACGTTT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGTATCACGC--
AATAGGGTATCATATAT
A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PAX5/MA0014.3/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGTATCACGC--
NNGGTCACGCTC
C G T A A C T G A C G T C G T A C G A T A G T C C G T A A G T C A C T G A G T C A C G T A C G T
T C A G C A T G T C A G A T C G G A C T A T G C C G T A A G T C T C A G A T G C G A C T A G T C