| p-value: | 1e-6 |
| log p-value: | -1.455e+01 |
| Information Content per bp: | 1.923 |
| Number of Target Sequences with motif | 2.0 |
| Percentage of Target Sequences with motif | 11.76% |
| Number of Background Sequences with motif | 3.1 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 86.0 +/- 40.0bp |
| Average Position of motif in Background | 119.6 +/- 32.0bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
Lhx3/MA0135.1/Jaspar
| Match Rank: | 1 |
| Score: | 0.78 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GAGAATTAATTC GATTAATTAATTT |
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PH0142.1_Pou1f1/Jaspar
| Match Rank: | 2 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GAGAATTAATTC---- GATTAATTAATTAAGTC |
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PH0149.1_Pou3f4/Jaspar
| Match Rank: | 3 |
| Score: | 0.76 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GAGAATTAATTC---- AATTAATTAATTAATTC |
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PH0146.1_Pou3f1/Jaspar
| Match Rank: | 4 |
| Score: | 0.74 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GAGAATTAATTC---- AATTAATTAATTAATTC |
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PH0147.1_Pou3f2/Jaspar
| Match Rank: | 5 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAGAATTAATTC----- GATAATTAATTAGTTTG |
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|
|
PH0118.1_Nkx6-1_1/Jaspar
| Match Rank: | 6 |
| Score: | 0.72 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAGAATTAATTC----- GAAAATTAATTACTTCG |
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Arid3b/MA0601.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.71 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | GAGAATTAATTC -NTAATTAATAT |
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PH0124.1_Obox5_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.71 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GAGAATTAATTC----- NANANTTAATCCCNNNN |
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PH0120.1_Nkx6-3/Jaspar
| Match Rank: | 9 |
| Score: | 0.70 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GAGAATTAATTC----- GAAAATTAATTACTTTG |
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|
MF0010.1_Homeobox_class/Jaspar
| Match Rank: | 10 |
| Score: | 0.70 |
| Offset: | 3 |
| Orientation: | reverse strand |
| Alignment: | GAGAATTAATTC ---AATTATT-- |
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