Information for 11-CAGAATGTTAAT (Motif 7)

A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T G C T A C G T A A T G C C G T A C G A T A C G T G T A C A C G T A C T G
p-value:1e-10
log p-value:-2.446e+01
Information Content per bp:1.899
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets129.8 +/- 56.0bp
Average Position of motif in Background71.8 +/- 59.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAGAATGTTAAT---
---TATGCWAATBAV
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CAGAATGTTAAT---
---WATGCAAATGAG
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGAATGTTAAT--
---TATGTAAATAT
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGAATGTTAAT
---TATGCAAAT
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T
A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGAATGTTAAT--
-ATTATGCTAATTT
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T A C G T
A C G T C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T

POU2F1/MA0785.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGAATGTTAAT-
-AATATGCAAATT
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T
A C G T G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGAATGTTAAT--
--TTATGCAAATTA
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F4/MA0789.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CAGAATGTTAAT
---TATGCAAAT
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T
A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU1F1/MA0784.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGAATGTTAAT---
-AATATGCAAATTAG
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C G A T C T G A G A C T C A T G A G T C G C T A C G T A G T C A C G A T A C G T C G T A C T A G

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGAATGTTAAT----
TTGTATGCAAATTAGA
A G T C C G T A A C T G C G T A C G T A A C G T A T C G A C G T C G A T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A