Information for 8-TCGACATGGC (Motif 13)

A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C G T A C T G A C G T A G T C A C T G C G T A
p-value:1e-3
log p-value:-9.097e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif10.00%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets117.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TCGACATGGC---
-CAAGATGGCGGC
A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCGACATGGC----
TTGCCATGGCAACN
A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C

YY2/MA0748.2/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCGACATGGC----
---AGATGGCGGCG
A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A T A C G T C G A A G C T T A C G C T A G G A T C A T C G T A C G G T A C T A C G

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCGACATGGC---
-CAAGATGGCGGC
A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

MXI1/MA1108.2/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCGACATGGC
GACACATGGC
A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C
C T A G T C G A G A T C C T G A A G T C C T G A A G C T C T A G A C T G A T G C

ZFP42/MA1651.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCGACATGGC--------
GTTCCAAAATGGCTGCCTCCG
A C G T A C G T A C G T A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G C A T G C A T G T A C G T A C C T G A C G T A T C G A C T G A A G C T T A C G A C T G G T A C A C G T A T C G G A T C A G T C G A C T A T G C A T G C T C A G

CREB3L1/MA0839.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCGACATGGC--
TGATGACGTGGCAN
A C G T A C G T A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T

CREB3L4/MA1474.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TCGACATGGC-
GGTGACGTGGCN
A C G T A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T
T A C G T C A G A G C T A T C G T C G A A G T C T C A G A G C T C A T G C A T G G T A C T C G A

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCGACATGGC---
KGTTGCCATGGCAAC
A C G T A C G T A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCGACATGGC-----
GTTGCCATGGCAACCG
A C G T A C G T A G T C A C T G C G T A A G T C C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G