| p-value: | 1e-11 |
| log p-value: | -2.587e+01 |
| Information Content per bp: | 1.941 |
| Number of Target Sequences with motif | 28.0 |
| Percentage of Target Sequences with motif | 0.19% |
| Number of Background Sequences with motif | 13.8 |
| Percentage of Background Sequences with motif | 0.04% |
| Average Position of motif in Targets | 98.1 +/- 57.4bp |
| Average Position of motif in Background | 102.6 +/- 47.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0048.1_Hoxa13/Jaspar
| Match Rank: | 1 |
| Score: | 0.72 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACCTCGTA------ AAACCTCGTAAAATTT |
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HOXC13/MA0907.1/Jaspar
| Match Rank: | 2 |
| Score: | 0.68 |
| Offset: | 1 |
| Orientation: | forward strand |
| Alignment: | ACCTCGTA---- -GCTCGTAAAAA |
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PH0068.1_Hoxc13/Jaspar
| Match Rank: | 3 |
| Score: | 0.67 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACCTCGTA------ AAAGCTCGTAAAATTT |
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HOXA9/MA0594.2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | 2 |
| Orientation: | forward strand |
| Alignment: | ACCTCGTA---- --GTCGTAAACG |
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|
PB0136.1_IRC900814_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | -5 |
| Orientation: | forward strand |
| Alignment: | -----ACCTCGTA--- ATGGAAAGTCGTAAAA |
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|
|
PH0077.1_Hoxd12/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACCTCGTA------- CAAGGTCGTAAAATCTT |
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|
|
Dmrt1/MA1603.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---ACCTCGTA-- GNTACTTTGTATC |
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|
|
PH0067.1_Hoxc12/Jaspar
| Match Rank: | 8 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACCTCGTA------- TTAGGTCGTAAAATTTC |
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|
|
PH0066.1_Hoxc11/Jaspar
| Match Rank: | 9 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACCTCGTA------ TAAAGTCGTAAAATAG |
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|
|
PH0076.1_Hoxd11/Jaspar
| Match Rank: | 10 |
| Score: | 0.60 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ACCTCGTA------- TAAGGTCGTAAAATCCT |
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