Information for 1-GTTCATAGGA (Motif 7)

C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A
Reverse Opposite:
G C A T T G A C A G T C A C G T C T G A A G C T C T A G G T C A C G T A A G T C
p-value:1e-10
log p-value:-2.419e+01
Information Content per bp:1.835
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.49%
Number of Background Sequences with motif313.3
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets102.9 +/- 52.5bp
Average Position of motif in Background103.0 +/- 59.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR1I3/MA1534.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTTCATAGGA
AAAGTTCAT----
A C G T A C G T A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A
C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T A C G T A C G T A C G T A C G T

VDR/MA0693.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTTCATAGGA
TGAGTTCA-----
A C G T A C G T A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A
G A C T T C A G C T G A A C T G A C G T C A G T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTCATAGGA-
-TTCTNMGGAA
C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A A C G T
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

Stat6/MA0520.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATAGGA----
ANTTCTCAGGAANNN
A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GTTCATAGGA-
ANTTCTNNAGAA
A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A A C G T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATAGGA
NTTTTATDRG-
A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A
C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GTTCATAGGA---
TATAGATCAAAGGAAAA
A C G T A C G T A C G T A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTCATAGGA-
NTTTCTNAGAAA
A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A A C G T
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

TCF7/MA0769.2/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTTCATAGGA
ANATCAAAGNN
A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTCATAGGA
ACATCAAAGG-
A C G T C T A G A C G T A C G T A G T C T C G A A G C T T G C A A C T G A C T G C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T