Information for 25-TGCHTVCCTAGG (Motif 26)

A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G
Reverse Opposite:
A G T C G T A C A C G T C T G A A C T G A C T G A G T C C T G A C A G T A T C G A T G C G T C A
p-value:1e-3
log p-value:-7.510e+00
Information Content per bp:1.717
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1633.7
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets109.5 +/- 29.9bp
Average Position of motif in Background100.1 +/- 72.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.4/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TGCHTVCCTAGG-----
--AGTCCCCAGGGGACT
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C T A G A C G T A G T C G A T C G A T C G T A C C G T A C T A G C T A G C T A G T C A G T G C A G T A C G C A T

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGCHTVCCTAGG---
NNNGTAACTANGNNA
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGCHTVCCTAGG
--GTTAACTAGN
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G
A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCHTVCCTAGG----
----TCCCNNGGGACN
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

EBF3/MA1637.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGCHTVCCTAGG----
---TTCCCAAGGGAAT
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G T C A G T C G A T G C A G C A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCHTVCCTAGG--
----TGCCCAGNHW
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Ebf2/MA1604.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TGCHTVCCTAGG----
---TTCCCAAGGGACT
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T A G C G A T C G A T C G T C A C T G A T C A G C T A G C T A G T C G A T G A C G A C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCHTVCCTAGG-
GGGGCTYGKCTGGGA
A C G T A C G T A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGCHTVCCTAGG---
-ACATGCCCGGGCAT
A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGCHTVCCTAGG----
NTCNTCCCCTATNNGNN
A C G T A C G T A T C G A T G C G C T A A G C T T A C G G T A C A G T C A G C T C G T A A C T G A C T G A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A