| p-value: | 1e-3 |
| log p-value: | -7.088e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 9.09% |
| Number of Background Sequences with motif | 6.5 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 139.0 +/- 0.0bp |
| Average Position of motif in Background | 128.9 +/- 71.4bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
PH0073.1_Hoxc9/Jaspar
| Match Rank: | 1 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGCCAGTAAT--- GGAGGTCATTAATTAT |
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POL004.1_CCAAT-box/Jaspar
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---GGCCAGTAAT ACTAGCCAATCA- |
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SD0002.1_at_AC_acceptor/Jaspar
| Match Rank: | 3 |
| Score: | 0.63 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --GGCCAGTAAT AAGGCAAGTGT- |
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PB0195.1_Zbtb3_2/Jaspar
| Match Rank: | 4 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | reverse strand |
| Alignment: | ----GGCCAGTAAT-- NNNNTGCCAGTGATTG |
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PH0055.1_Hoxa7_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.62 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | GGCCAGTAAT------ TNCCATTAATTACTNC |
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|
|
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer
| Match Rank: | 6 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -GGCCAGTAAT- RGGGCACTAACY |
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|
|
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGCCAGTAAT-- GGCCATAAATCA |
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|
|
PH0080.1_Hoxd8/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -1 |
| Orientation: | reverse strand |
| Alignment: | -GGCCAGTAAT------ NAGCCATTAATTANTTA |
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|
|
NFYB/MA0502.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | reverse strand |
| Alignment: | --GGCCAGTAAT NTGGCCAATGAG |
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|
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | 0 |
| Orientation: | forward strand |
| Alignment: | GGCCAGTAAT GGCCATTAAC |
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