Information for 19-CTTTCTATAGAA (Motif 27)

A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T G T C A A C G T C G T A A C T G C G T A C G T A C G T A A C T G
p-value:1e-6
log p-value:-1.586e+01
Information Content per bp:1.975
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif7.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets152.5 +/- 7.9bp
Average Position of motif in Background123.5 +/- 42.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTTTCTATAGAA
ANTTCTNNAGAA
A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

Stat6/MA0520.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTATAGAA--
CATTTCCTGAGAAAT
A C G T A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CTTTCTATAGAA
--TTCTNMGGAA
A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

POL012.1_TATA-Box/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTCTATAGAA
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTCTATAGAA
NNNNNNCTTTTATAN--
A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

PRDM1/MA0508.3/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CTTTCTATAGAA
TTCTTTCTCTT---
A C G T A C G T A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTATAGAA
TCTATTTATAGN-
A C G T A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTTTCTATAGAA---
TCTTTATATATAAATA
A C G T A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

MEF2B/MA0660.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCTATAGAA
GCTATTTATAGC-
A C G T A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTTTCTATAGAA----
CTACCAATAAAATTCT
A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C G T C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T