Information for 12-CTTAAGATGTTC (Motif 13)

G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C
Reverse Opposite:
C T A G C T G A C T G A A T G C G T C A G C A T G T A C A C G T G A C T C G T A C G T A A C T G
p-value:1e-13
log p-value:-3.064e+01
Information Content per bp:1.743
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif25.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets137.5 +/- 34.2bp
Average Position of motif in Background117.1 +/- 48.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTTAAGATGTTC--
NTNNTTAAGTGGNTNAN
A C G T A C G T A C G T G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTTAAGATGTTC--
NTNNTTAAGTGGTTANN
A C G T A C G T A C G T G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx3-2/MA0122.3/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTTAAGATGTTC-
NTTAAGTGGTTNN
G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C A C G T
C G A T G C A T C G A T C T G A C G T A C A T G C G A T C T A G A C T G G C A T G C A T G C T A G C A T

PH0115.1_Nkx2-6/Jaspar

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CTTAAGATGTTC-
AATNTTAAGTGGNTNN
A C G T A C G T A C G T G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C A C G T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTTAAGATGTTC
-TTAAGTGGT--
G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C
A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTTAAGATGTTC
CTYRAGTGSY--
G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTAAGATGTTC
-TTAAGTGCTT-
G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C
A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTAAGATGTTC
-TTGAGTGSTT-
G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C
A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTTAAGATGTTC
CTTGAGTGGCT-
G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTTAAGATGTTC-
AAATTCAAGTGGNTTN
A C G T A C G T A C G T G T A C C G A T A C G T C G T A C G T A A C T G C G T A C A G T A T C G G A C T A G C T A G T C A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A