Information for 3-AAGTGATGGAGA (Motif 3)

C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A G T C C G T A A C G T G T A C C G T A A G T C A C G T A C G T
p-value:1e-19
log p-value:-4.378e+01
Information Content per bp:1.959
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif8.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets71.0 +/- 50.1bp
Average Position of motif in Background105.6 +/- 80.4bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0098.1_Zfp410_1/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAGTGATGGAGA-
TATTATGGGATGGATAA
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T
C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

PB0139.1_Irf5_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGTGATGGAGA-----
--TTGACCGAGAATTCC
C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAGTGATGGAGA-
-GRTGMTRGAGCC
C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAGTGATGGAGA--
----AATGGAAAAT
C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AAGTGATGGAGA-
---TGATKGATGR
C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A C G T C G A T C T A G C G T A G A C T C A G T C T A G C G T A A G C T C A T G C T A G

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AAGTGATGGAGA
NTCAAGTGGN-----
A C G T A C G T A C G T C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AAGTGATGGAGA
TTAAGTGGT-----
A C G T A C G T C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AAGTGATGGAGA
VTGYGKGGGAGK
C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A
T G C A C A G T T A C G G A C T C T A G A C G T C T A G A C T G A C T G G T C A C T A G C A T G

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----AAGTGATGGAGA-
NNNNNATTGATGNGTGN
A C G T A C G T A C G T A C G T C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:AAGTGATGGAGA--
----NATGGAAAAN
C G T A C G T A A C T G C G A T A C T G C G T A A C G T A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T