Information for 15-CAAAGTCCAT (Motif 24)

G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A C T G G T C A A G T C A G C T A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.881
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.92%
Number of Background Sequences with motif147.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets113.5 +/- 56.1bp
Average Position of motif in Background101.4 +/- 55.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4A/MA0114.4/Jaspar

Match Rank:1
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--CAAAGTCCAT-
TCCAAAGTCCAAA
A C G T A C G T G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T A C G T
C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

HNF4G/MA0484.2/Jaspar

Match Rank:2
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--CAAAGTCCAT-
TCCAAAGTCCAGA
A C G T A C G T G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T A C G T
C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CAAAGTCCAT---
GGCAAAAGTCCAATAA
A C G T A C G T A C G T G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.82
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGTCCAT
CANAGNNCAAAGTCCA-
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAAAGTCCAT
CAAAGKTCAA
G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
G A T C G T C A T C G A T C G A C T A G C A T G A G C T G T A C T C G A T C G A

NR1I3/MA1534.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CAAAGTCCAT
-AAAGTTCAT
G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
A C G T C G T A C T G A C T G A A C T G A C G T C A G T A G T C C T G A G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAAAGTCCAT
CAAAGGTCAG
G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAAGTCCAT
AAAAGTCAA-
G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAAAGTCCAT
TCAAGGTCATA
A C G T G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

PPARa(NR),DR1/Liver-Ppara-ChIP-Seq(GSE47954)/Homer

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------CAAAGTCCAT
VNAGGKCAAAGGTCA-
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A C G T A C T G A A C T G A C G T A G T C A G T C C G T A C G A T
T G A C C G A T C T G A C T A G C T A G A C G T A T G C T G C A T C G A C T G A C T A G C A T G A C G T A G T C C G T A A C G T