Information for 13-AAGCATAGGTAG (Motif 15)

C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
Reverse Opposite:
A G T C A C G T C G T A A G T C A G T C A C G T C G T A A C G T A C T G A G T C A C G T A C G T
p-value:1e-4
log p-value:-9.232e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif11.11%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets138.0 +/- 0.0bp
Average Position of motif in Background151.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHE23/MA0817.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGCATAGGTAG
AAACATATGTTT
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAGCATAGGTAG-----
-NNNTTAGGTAGCNTNT
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

BHLHE22/MA0818.1/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AAGCATAGGTAG
-ANCATATGGT-
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
A C G T C T G A T C G A T G A C C T G A A C G T C T G A G A C T A C T G A C T G A G C T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAGCATAGGTAG
--CCATATGT--
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AAGCATAGGTAG
AAGGATATNTN-
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AAGCATAGGTAG
-AACATATGTT-
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
A C G T C T G A T G C A G T A C C G T A A C G T T G C A G A C T A C T G A C G T A G C T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGCATAGGTAG----
TCGCGAAGGTTGTACT
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AAGCATAGGTAG
-ANCATATGTT-
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAGCATAGGTAG
-ACCATATGTT-
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T

NEUROG1/MA0623.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGCATAGGTAG
-GACATATGTC-
C G T A C G T A A C T G A G T C C G T A A C G T C G T A A C T G A C T G A C G T C G T A A C T G
A C G T T C A G T G C A A T G C C T G A G A C T C T G A A G C T A C T G A C G T A G T C A C G T