| p-value: | 1e-3 |
| log p-value: | -6.995e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 11.11% |
| Number of Background Sequences with motif | 10.2 |
| Percentage of Background Sequences with motif | 0.01% |
| Average Position of motif in Targets | 58.0 +/- 0.0bp |
| Average Position of motif in Background | 144.7 +/- 59.3bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
SD0001.1_at_AC_acceptor/Jaspar
| Match Rank: | 1 |
| Score: | 0.76 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTTACCTAGT NNACTTACCTN-- |
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RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 2 |
| Score: | 0.69 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTACCTAGT-- BTGACCTAVTTW |
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PH0040.1_Hmbox1/Jaspar
| Match Rank: | 3 |
| Score: | 0.68 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTTACCTAGT---- GANGTTAACTAGTTTNN |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 4 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTTACCTAGT- -TGACCTARTT |
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RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 5 |
| Score: | 0.66 |
| Offset: | 1 |
| Orientation: | reverse strand |
| Alignment: | CTTACCTAGT- -TGACCTARTT |
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|
|
HMBOX1/MA0895.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTACCTAGT GTTAACTAGN |
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|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.66 |
| Offset: | 0 |
| Orientation: | reverse strand |
| Alignment: | CTTACCTAGT---- TTGACCTANTTATN |
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|
RORa(NR)/Liver-Rora-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 8 |
| Score: | 0.65 |
| Offset: | -3 |
| Orientation: | reverse strand |
| Alignment: | ---CTTACCTAGT-- NNHYTGACCTAGWTT |
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|
GATA2/MA0036.3/Jaspar
| Match Rank: | 9 |
| Score: | 0.62 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --CTTACCTAGT TTCTTATCTTT- |
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PH0168.1_Hnf1b/Jaspar
| Match Rank: | 10 |
| Score: | 0.62 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----CTTACCTAGT--- AGCTGTTAACTAGCCGT |
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