| p-value: | 1e-3 |
| log p-value: | -7.679e+00 |
| Information Content per bp: | 1.530 |
| Number of Target Sequences with motif | 1.0 |
| Percentage of Target Sequences with motif | 7.14% |
| Number of Background Sequences with motif | 2.0 |
| Percentage of Background Sequences with motif | 0.00% |
| Average Position of motif in Targets | 157.0 +/- 0.0bp |
| Average Position of motif in Background | 112.0 +/- 65.5bp |
| Strand Bias (log2 ratio + to - strand density) | 10.0 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix) reverse opposite |
| SVG Files for Logos: | forward logo reverse opposite |
RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer
| Match Rank: | 1 |
| Score: | 0.66 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATTAGGTCCC WAABTAGGTCAV |
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|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 2 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTAGGTCCC AAYTAGGTCA- |
|
|
|
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer
| Match Rank: | 3 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTAGGTCCC AAYTAGGTCA- |
|
|
|
RORB/MA1150.1/Jaspar
| Match Rank: | 4 |
| Score: | 0.64 |
| Offset: | -1 |
| Orientation: | forward strand |
| Alignment: | -ATTAGGTCCC AATTAGGTCAC |
|
|
|
RORA(var.2)/MA0072.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.63 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATTAGGTCCC TATAAGTAGGTCAA |
|
|
|
RORC/MA1151.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.62 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATTAGGTCCC ATAAGTAGGTCA- |
|
|
|
BARX1/MA0875.1/Jaspar
| Match Rank: | 7 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATTAGGTCCC GCAATTAG----- |
|
|
|
HOXB3/MA0903.1/Jaspar
| Match Rank: | 8 |
| Score: | 0.61 |
| Offset: | -4 |
| Orientation: | forward strand |
| Alignment: | ----ATTAGGTCCC ACTAATTAGC---- |
|
|
|
PDX1/MA0132.2/Jaspar
| Match Rank: | 9 |
| Score: | 0.61 |
| Offset: | -3 |
| Orientation: | forward strand |
| Alignment: | ---ATTAGGTCCC GTAATTAG----- |
|
|
|
ZKSCAN1/MA1585.1/Jaspar
| Match Rank: | 10 |
| Score: | 0.61 |
| Offset: | -2 |
| Orientation: | forward strand |
| Alignment: | --ATTAGGTCCC ATAGTAGGTG-- |
|
|
|