Information for 14-CACAAAAGACAC (Motif 27)

A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C T G
p-value:1e-3
log p-value:-8.288e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif6.25%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 0.0bp
Average Position of motif in Background163.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer

Match Rank:1
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CACAAAAGACAC
BMRVACAAWGGV---
A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
A T G C T G A C C T G A T A C G C G T A A G T C C G T A C G T A C G T A C T A G T C A G T G C A A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAAAAGACAC
RACAAWGG----
A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAAGACAC
AAAACAAAGG----
A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

SOX15/MA1152.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACAAAAGACAC
AAAACAATAG----
A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
C G T A C T G A C T G A G C T A A G T C C G T A G T C A G C A T C T G A T C A G A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CACAAAAGACAC------
-ATAAATGACACCTATCA
A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAAGACAC
CGAAGCACACAAAATA-
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAAGACAC
AGAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACAAAAGACAC-
-ACAAAGGNBCCT
A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CACAAAAGACAC
---AAAAGTCAA
A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CACAAAAGACAC
ATAAGAACAAAGGACTA
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A C G T A C G T A C G T A A C T G C G T A A G T C C G T A A G T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A