Information for 10-GCCAGCAACG (Motif 16)

A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G
Reverse Opposite:
A G T C A C T G A C G T A C G T A C T G A G T C A C G T A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.372e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.0 +/- 0.0bp
Average Position of motif in Background101.1 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RFX7/MA1554.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GCCAGCAACG
-NTAGCAACG
A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G
A C G T C T G A G A C T T C G A T A C G G A T C C T G A C T G A A T G C T A C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCCAGCAACG--
CCGCATAGCAACGGA
A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C G T
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGCAACG
TGAGTCAGCA---
A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCAACG
TGCCAGCB---
A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G
G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCAGCAACG--
TACCATAGCAACGGT
A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C G T
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCAACG-
SCCTAGCAACAG
A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCCAGCAACG
CGTGCCAAG----
A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCCAGCAACG
CTGCCCGCA---
A C G T A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCAACG
GGCCATTAAC-
A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G
C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:forward strand
Alignment:-------GCCAGCAACG------
TGTGACCCTTAGCAACCGATTAA
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G A G T C C G T A C G T A A G T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A