EnhancerDB
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  3. vista1016[chr1:29503706-29504118]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1016[chr1:29503706-29504118]
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Tissue distribution of vista1016
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Transcription factor that possibly regulate vista1016[chr1:29503706-29504118]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 29503709 29503720 FOXP2 JASPAR yes 27805706
chr1 29503709 29503720 FOXP2 JASPAR yes 118263653
chr1 29503710 29503714 TEAD2 TRANSFAC yes 27805707
chr1 29503710 29503714 TEAD2 TRANSFAC yes 118263654
chr1 29503710 29503715 TBP TRANSFAC yes 27805708
chr1 29503710 29503715 TBP TRANSFAC yes 118263655
chr1 29503711 29503719 FOXG1 JASPAR yes 27805709
chr1 29503711 29503719 FOXO3 JASPAR yes 27805710
chr1 29503711 29503719 FOXG1 JASPAR yes 118263656
chr1 29503711 29503719 FOXO3 JASPAR yes 118263657
chr1 29503714 29503724 MYF6 JASPAR yes 27805711
chr1 29503714 29503724 MYF6 JASPAR yes 118263658
chr1 29503738 29503743 ETS2 TRANSFAC yes 27805712
chr1 29503738 29503743 ETS2 TRANSFAC yes 118263659
chr1 29503743 29503748 ATF1 TRANSFAC yes 27805713
chr1 29503743 29503748 ATF1 TRANSFAC yes 118263660
chr1 29503758 29503779 ZNF263 JASPAR yes 27805714
chr1 29503758 29503779 ZNF263 JASPAR yes 118263661
chr1 29503762 29503768 NFE2 TRANSFAC yes 27805715
chr1 29503762 29503768 NFE2 TRANSFAC yes 118263662
chr1 29503765 29503771 SP1 TRANSFAC yes 27805716
chr1 29503765 29503771 SP1 TRANSFAC yes 118263663
chr1 29503783 29503786 MYB TRANSFAC yes 27805717
chr1 29503783 29503786 MYB TRANSFAC yes 118263664
chr1 29503783 29503804 IRF1 JASPAR yes 27805718
chr1 29503783 29503804 IRF1 JASPAR yes 118263665
chr1 29503784 29503805 IRF1 JASPAR yes 27805719
chr1 29503784 29503805 IRF1 JASPAR yes 118263666
chr1 29503789 29503810 IRF1 JASPAR yes 27805720
chr1 29503789 29503810 IRF1 JASPAR yes 118263667
chr1 29503790 29503796 TCF4 TRANSFAC yes 27805721
chr1 29503790 29503796 TCF4 TRANSFAC yes 118263668
chr1 29503790 29503805 FOXP1 JASPAR yes 27805722
chr1 29503790 29503805 FOXP1 JASPAR yes 118263669
chr1 29503790 29503811 IRF1 JASPAR yes 27805723
chr1 29503790 29503811 IRF1 JASPAR yes 118263670
chr1 29503791 29503802 FOXP2 JASPAR yes 27805724
chr1 29503791 29503802 FOXP2 JASPAR yes 118263671
chr1 29503791 29503803 FOXC2 JASPAR yes 27805725
chr1 29503791 29503803 FOXC2 JASPAR yes 118263672
chr1 29503791 29503806 STAT2 JASPAR yes 27805726
chr1 29503791 29503806 STAT2 JASPAR yes 118263673
chr1 29503792 29503807 FOXP1 JASPAR yes 27805727
chr1 29503792 29503807 FOXP1 JASPAR yes 118263674
chr1 29503794 29503809 FOXP1 JASPAR yes 27805728
chr1 29503794 29503809 FOXP1 JASPAR yes 118263675
chr1 29503795 29503810 FOXP1 JASPAR yes 27805729
chr1 29503795 29503810 FOXP1 JASPAR yes 118263676
chr1 29503796 29503811 FOXP1 JASPAR yes 27805730
chr1 29503796 29503811 FOXP1 JASPAR yes 118263677
chr1 29503797 29503812 FOXP1 JASPAR yes 27805731
chr1 29503797 29503812 FOXP1 JASPAR yes 118263678
chr1 29503798 29503813 FOXP1 JASPAR yes 27805732
chr1 29503798 29503813 FOXP1 JASPAR yes 118263679
chr1 29503861 29503878 ESR1 JASPAR yes 27805733
chr1 29503861 29503878 ESR1 JASPAR yes 118263680
chr1 29503865 29503874 RUNX2 JASPAR yes 27805734
chr1 29503865 29503874 RUNX2 JASPAR yes 118263681
chr1 29503901 29503914 ATF4 JASPAR yes 27805735
chr1 29503901 29503914 ATF4 JASPAR yes 118263682
chr1 29503919 29503935 RFX2 JASPAR yes 27805736
chr1 29503919 29503935 RFX3 JASPAR yes 27805737
chr1 29503919 29503935 RFX4 JASPAR yes 27805738
chr1 29503919 29503935 RFX2 JASPAR yes 118263683
chr1 29503919 29503935 RFX3 JASPAR yes 118263684
chr1 29503919 29503935 RFX4 JASPAR yes 118263685
chr1 29503930 29503946 T JASPAR yes 27805739
chr1 29503930 29503946 T JASPAR yes 118263686
chr1 29503934 29503946 HES5 JASPAR yes 27805740
chr1 29503934 29503946 HES7 JASPAR yes 27805741
chr1 29503934 29503946 PKNOX2 JASPAR yes 27805742
chr1 29503934 29503946 HES5 JASPAR yes 118263687
chr1 29503934 29503946 HES7 JASPAR yes 118263688
chr1 29503934 29503946 PKNOX2 JASPAR yes 118263689
chr1 29503940 29503954 CREB3L1 JASPAR yes 27805743
chr1 29503940 29503954 CREB3L1 JASPAR yes 118263690
chr1 29503948 29503953 SP1 TRANSFAC yes 27805744
chr1 29503948 29503953 SP1 TRANSFAC yes 118263691
chr1 29503957 29503960 MYB TRANSFAC yes 27805745
chr1 29503957 29503960 MYB TRANSFAC yes 118263692
chr1 29503960 29503966 LEF1 TRANSFAC yes 27805746
chr1 29503960 29503966 SOX10 JASPAR yes 27805747
chr1 29503960 29503966 LEF1 TRANSFAC yes 118263693
chr1 29503960 29503966 SOX10 JASPAR yes 118263694
chr1 29503961 29503976 MEF2A JASPAR yes 27805748
chr1 29503961 29503976 MEF2A JASPAR yes 118263695
chr1 29503962 29503977 MEF2C JASPAR yes 27805749
chr1 29503962 29503977 MEF2C JASPAR yes 118263696
chr1 29503963 29503975 MEF2A JASPAR yes 27805750
chr1 29503963 29503975 MEF2B JASPAR yes 27805751
chr1 29503963 29503975 MEF2D JASPAR yes 27805752
chr1 29503963 29503975 MEF2A JASPAR yes 118263697
chr1 29503963 29503975 MEF2B JASPAR yes 118263698
chr1 29503963 29503975 MEF2D JASPAR yes 118263699
chr1 29503965 29503969 YY1 TRANSFAC yes 27805753
chr1 29503965 29503969 YY1 TRANSFAC yes 118263700
chr1 29503987 29503999 YY1 JASPAR yes 27805754
chr1 29503987 29503999 YY1 JASPAR yes 118263701
chr1 29503994 29504014 PPARG JASPAR yes 27805755
chr1 29503994 29504014 PPARG JASPAR yes 118263702
chr1 29503997 29504017 ESR1 JASPAR yes 27805756
chr1 29503997 29504017 ESR1 JASPAR yes 118263703
chr1 29503998 29504002 ESR1 TRANSFAC yes 27805757
chr1 29503998 29504002 ESR1 TRANSFAC yes 118263704
chr1 29504009 29504027 RARA JASPAR yes 27805758
chr1 29504009 29504027 RARA JASPAR yes 118263705
chr1 29504016 29504029 NR2F1 JASPAR yes 27805759
chr1 29504016 29504029 NR2F1 JASPAR yes 118263706
chr1 29504018 29504029 ESRRA JASPAR yes 27805760
chr1 29504018 29504029 ESRRB JASPAR yes 27805761
chr1 29504018 29504029 ESRRA JASPAR yes 118263707
chr1 29504018 29504029 ESRRB JASPAR yes 118263708
chr1 29504042 29504049 E2F1 TRANSFAC yes 27805762
chr1 29504042 29504049 E2F1 TRANSFAC yes 118263709
chr1 29504062 29504077 SCRT1 JASPAR yes 27805763
chr1 29504062 29504077 SCRT1 JASPAR yes 118263710
chr1 29504065 29504077 PKNOX1 JASPAR yes 27805764
chr1 29504065 29504077 TGIF1 JASPAR yes 27805765
chr1 29504065 29504077 PKNOX1 JASPAR yes 118263711
chr1 29504065 29504077 TGIF1 JASPAR yes 118263712
chr1 29504066 29504075 SNAI2 JASPAR yes 27805766
chr1 29504066 29504075 SNAI2 JASPAR yes 118263713
chr1 29504066 29504076 FIGLA JASPAR yes 27805767
chr1 29504066 29504076 ID4 JASPAR yes 27805768
chr1 29504066 29504076 TCF3 JASPAR yes 27805769
chr1 29504066 29504076 TCF4 JASPAR yes 27805770
chr1 29504066 29504076 FIGLA JASPAR yes 118263714
chr1 29504066 29504076 ID4 JASPAR yes 118263715
chr1 29504066 29504076 TCF3 JASPAR yes 118263716
chr1 29504066 29504076 TCF4 JASPAR yes 118263717
chr1 29504068 29504077 ZEB1 JASPAR yes 27805771
chr1 29504068 29504077 ZEB1 JASPAR yes 118263718
chr1 29504068 29504078 TBX21 JASPAR yes 27805772
chr1 29504068 29504078 TBX21 JASPAR yes 118263719
chr1 29504069 29504077 MGA JASPAR yes 27805773
chr1 29504069 29504077 TBX15 JASPAR yes 27805774
chr1 29504069 29504077 TBX1 JASPAR yes 27805775
chr1 29504069 29504077 TBX4 JASPAR yes 27805776
chr1 29504069 29504077 TBX5 JASPAR yes 27805777
chr1 29504069 29504077 MGA JASPAR yes 118263720
chr1 29504069 29504077 TBX15 JASPAR yes 118263721
chr1 29504069 29504077 TBX1 JASPAR yes 118263722
chr1 29504069 29504077 TBX4 JASPAR yes 118263723
chr1 29504069 29504077 TBX5 JASPAR yes 118263724
chr1 29504069 29504079 TBR1 JASPAR yes 27805778
chr1 29504069 29504079 TBR1 JASPAR yes 118263725
chr1 29504069 29504082 SMAD2 JASPAR yes 27805779
chr1 29504069 29504082 SMAD2 JASPAR yes 118263726
chr1 29504073 29504084 FOSL2 JASPAR yes 27805780
chr1 29504073 29504084 FOSL2 JASPAR yes 118263727
chr1 29504079 29504084 MYC TRANSFAC yes 27805781
chr1 29504079 29504084 MYC TRANSFAC yes 118263728
chr1 29504110 29504120 HOXA13 JASPAR yes 27805782
chr1 29504110 29504120 HOXB13 JASPAR yes 27805783
chr1 29504110 29504120 HOXD13 JASPAR yes 27805784
chr1 29504110 29504120 HOXA13 JASPAR yes 118263729
chr1 29504110 29504120 HOXB13 JASPAR yes 118263730
chr1 29504110 29504120 HOXD13 JASPAR yes 118263731
chr1 29504110 29504127 RXRA JASPAR yes 27805785
chr1 29504110 29504127 RXRA JASPAR yes 118263732
chr1 29504118 29504123 SP1 TRANSFAC yes 27805786
chr1 29504118 29504123 SP1 TRANSFAC yes 118263733
SNP sites on vista1016[chr1:29503706-29504118]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 29503749 rs569875073 T C no 196048
chr1 29503757 rs1389268 G A no 196049
chr1 29503795 rs397934546 G GT
FOXC2 FOXP1 FOXP2 IRF1 STAT2 TCF4
196050
chr1 29503795 rs541847685 G GT,GTT
FOXC2 FOXP1 FOXP2 IRF1 STAT2 TCF4
196051
chr1 29503815 rs555722221 C T no 196052
chr1 29503952 rs553906957 C T
CREB3L1 SP1
196053
Genes possibly regulated by vista1016[chr1:29503706-29504118]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 29445940 29450447 - TMEM200B ENSG00000253304.1 29450447 0.93 1.0 421 46741
chr1 29474255 29508499 - SRSF4 ENSG00000116350.11 29508499 0.57 0.99 422 95619
chr1 29519385 29557454 - MECR ENSG00000116353.11 29557454 0.78 1.0 423 46664
chr1 29563028 29653325 + PTPRU ENSG00000060656.15 29563028 0.73 1.0 424 41090
Expression level of Genes
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miRNAs possibly regulated by vista1016[chr1:29503706-29504118]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results