EnhancerDB
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  3. rs553906957[chr1:29503952]
Enhancers that have rs553906957[chr1:29503952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29500805 29506459 enh11687
Liver (HepG2) Large Intestine Esophagus Astrocyte Muscle (A673) Placenta Uterus Blood (T-cell)
chr1 29503706 29504118 vista1016
VISTA
Transcript factors that have rs553906957[chr1:29503952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29503530 29504048 SOX2 GTRD no Neural Stem Cells (H9) 107802673
chr1 29503859 29504495 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802674
chr1 29503940 29503954 CREB3L1 JASPAR yes 27805743
chr1 29503940 29503954 CREB3L1 JASPAR yes 118263690
chr1 29503948 29503953 SP1 TRANSFAC yes 27805744
chr1 29503948 29503953 SP1 TRANSFAC yes 118263691
Genes associated with rs553906957[chr1:29503952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More