EnhancerDB
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  3. vista1067[chr1:31628220-31628457]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1067[chr1:31628220-31628457]
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Tissue distribution of vista1067
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Transcription factor that possibly regulate vista1067[chr1:31628220-31628457]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 31628217 31628221 LFA1 TRANSFAC yes 27913354
chr1 31628217 31628221 LFA1 TRANSFAC yes 118266315
chr1 31628249 31628260 TFAP2A JASPAR yes 27913355
chr1 31628249 31628260 TFAP2B JASPAR yes 27913356
chr1 31628249 31628260 TFAP2C JASPAR yes 27913357
chr1 31628249 31628260 TFAP2A JASPAR yes 118266316
chr1 31628249 31628260 TFAP2B JASPAR yes 118266317
chr1 31628249 31628260 TFAP2C JASPAR yes 118266318
chr1 31628250 31628259 TFAP2A JASPAR yes 27913358
chr1 31628250 31628259 TFAP2A JASPAR yes 118266319
chr1 31628253 31628260 SP1 TRANSFAC yes 27913359
chr1 31628253 31628260 SP1 TRANSFAC yes 118266320
chr1 31628253 31628263 SP1 JASPAR yes 27913360
chr1 31628253 31628263 SP1 JASPAR yes 118266321
chr1 31628255 31628260 SP1 TRANSFAC yes 27913361
chr1 31628255 31628260 SP1 TRANSFAC yes 118266322
chr1 31628259 31628264 SP1 TRANSFAC yes 27913362
chr1 31628259 31628264 SP1 TRANSFAC yes 118266323
chr1 31628280 31628291 EBF1 JASPAR yes 27913363
chr1 31628280 31628291 EBF1 JASPAR yes 118266324
chr1 31628285 31628298 NFKB1 JASPAR yes 27913364
chr1 31628285 31628298 NFKB1 JASPAR yes 118266325
chr1 31628290 31628305 ZIC3 JASPAR yes 27913365
chr1 31628290 31628305 ZIC4 JASPAR yes 27913366
chr1 31628290 31628305 ZIC3 JASPAR yes 118266326
chr1 31628290 31628305 ZIC4 JASPAR yes 118266327
chr1 31628291 31628305 ZIC1 JASPAR yes 27913367
chr1 31628291 31628305 ZIC1 JASPAR yes 118266328
chr1 31628306 31628327 ZNF263 JASPAR yes 27913368
chr1 31628306 31628327 ZNF263 JASPAR yes 118266329
chr1 31628311 31628330 CTCF JASPAR yes 27913369
chr1 31628311 31628330 CTCF JASPAR yes 118266330
chr1 31628316 31628322 MAZ TRANSFAC yes 27913370
chr1 31628316 31628322 MAZ TRANSFAC yes 118266331
chr1 31628321 31628336 NR2C2 JASPAR yes 27913371
chr1 31628321 31628336 NR2C2 JASPAR yes 118266332
chr1 31628330 31628336 SP1 TRANSFAC yes 27913372
chr1 31628330 31628336 SP1 TRANSFAC yes 118266333
chr1 31628331 31628336 SP1 TRANSFAC yes 27913373
chr1 31628331 31628336 SP1 TRANSFAC yes 118266334
chr1 31628341 31628346 SP1 TRANSFAC yes 27913374
chr1 31628341 31628346 SP1 TRANSFAC yes 118266335
chr1 31628343 31628353 MAX JASPAR yes 27913375
chr1 31628343 31628353 MAX JASPAR yes 118266336
chr1 31628343 31628354 USF1 JASPAR yes 27913376
chr1 31628343 31628354 USF1 JASPAR yes 118266337
chr1 31628344 31628354 MNT JASPAR yes 27913377
chr1 31628344 31628354 MNT JASPAR yes 118266338
chr1 31628345 31628352 USF1 JASPAR yes 27913378
chr1 31628345 31628352 USF1 JASPAR yes 118266339
chr1 31628346 31628351 MYC TRANSFAC yes 27913379
chr1 31628346 31628351 USF1 TRANSFAC yes 27913380
chr1 31628346 31628351 USF2 TRANSFAC yes 27913381
chr1 31628346 31628351 MYC TRANSFAC yes 118266340
chr1 31628346 31628351 USF1 TRANSFAC yes 118266341
chr1 31628346 31628351 USF2 TRANSFAC yes 118266342
chr1 31628346 31628353 USF1 JASPAR yes 27913382
chr1 31628346 31628353 USF1 JASPAR yes 118266343
chr1 31628350 31628368 ESR1 JASPAR yes 27913383
chr1 31628350 31628368 ESR1 JASPAR yes 118266344
chr1 31628352 31628363 NRF1 JASPAR yes 27913384
chr1 31628352 31628363 NRF1 JASPAR yes 118266345
chr1 31628410 31628414 NFE TRANSFAC yes 27913385
chr1 31628410 31628414 NFE TRANSFAC yes 118266346
chr1 31628411 31628416 GATA2 JASPAR yes 27913386
chr1 31628411 31628416 GATA2 JASPAR yes 118266347
chr1 31628435 31628441 SP1 TRANSFAC yes 27913387
chr1 31628435 31628441 SP1 TRANSFAC yes 118266348
chr1 31628448 31628452 NFE TRANSFAC yes 27913388
chr1 31628448 31628452 NFE TRANSFAC yes 118266349
chr1 31628457 31628468 GCM1 JASPAR yes 27913389
chr1 31628457 31628468 GCM1 JASPAR yes 118266350
SNP sites on vista1067[chr1:31628220-31628457]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 31628254 rs112172798 G A
SP1 TFAP2A TFAP2B TFAP2C
209888
chr1 31628276 rs576826083 G T no 209889
chr1 31628282 rs72889480 C A
EBF1
209890
chr1 31628294 rs114228037 C T
NFKB1 ZIC1 ZIC3 ZIC4
209891
chr1 31628297 rs115197421 C T
NFKB1 ZIC1 ZIC3 ZIC4
209892
chr1 31628338 rs369533898 C T no 209893
chr1 31628341 rs531812119 CG C
SP1
209894
chr1 31628365 rs549432472 CCCACCCGCTTTGGGCCGCGCT C
ESR1
209895
chr1 31628386 rs116706538 T C no 209896
Genes possibly regulated by vista1067[chr1:31628220-31628457]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 31404353 31538838 - PUM1 ENSG00000134644.11 31538838 0.67 1.0 428 10618
chr1 31652592 31712401 - NKAIN1 ENSG00000084628.5 31712401 0.95 1.0 429 16056
Expression level of Genes
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miRNAs possibly regulated by vista1067[chr1:31628220-31628457]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results