EnhancerDB
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  3. vista11[chr1:945769-946034]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista11[chr1:945769-946034]
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Tissue distribution of vista11
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Transcription factor that possibly regulate vista11[chr1:945769-946034]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 945769 945783 NR2F1 JASPAR yes 118213507
chr1 945788 945798 SP1 JASPAR yes 118213508
chr1 945795 945800 ETS2 TRANSFAC yes 118213509
chr1 945818 945828 OLIG2 JASPAR yes 118213510
chr1 945818 945828 OLIG3 JASPAR yes 118213511
chr1 945820 945832 POU2F1 JASPAR yes 118213512
chr1 945820 945833 POU3F3 JASPAR yes 118213513
chr1 945820 945834 POU1F1 JASPAR yes 118213514
chr1 945821 945833 POU3F1 JASPAR yes 118213515
chr1 945821 945833 POU3F2 JASPAR yes 118213516
chr1 945822 945834 FOXC2 JASPAR yes 118213517
chr1 945822 945836 ONECUT2 JASPAR yes 118213518
chr1 945822 945836 ONECUT3 JASPAR yes 118213519
chr1 945823 945834 FOXB1 JASPAR yes 118213520
chr1 945823 945834 FOXC1 JASPAR yes 118213521
chr1 945840 945855 SCRT1 JASPAR yes 118213522
chr1 945843 945858 FOXA1 JASPAR yes 118213523
chr1 945844 945856 FOXI1 JASPAR yes 118213524
chr1 945844 945859 FOXP1 JASPAR yes 118213525
chr1 945845 945856 FOXP2 JASPAR yes 118213526
chr1 945845 945857 FOXC2 JASPAR yes 118213527
chr1 945845 945859 FOXF2 JASPAR yes 118213528
chr1 945846 945854 FOXG1 JASPAR yes 118213529
chr1 945846 945854 FOXO3 JASPAR yes 118213530
chr1 945846 945857 FOXB1 JASPAR yes 118213531
chr1 945846 945857 FOXC1 JASPAR yes 118213532
chr1 945847 945858 FOXA1 JASPAR yes 118213533
chr1 945847 945858 FOXH1 JASPAR yes 118213534
chr1 945851 945855 YY1 TRANSFAC yes 118213535
chr1 945856 945870 POU4F1 JASPAR yes 118213536
chr1 945856 945872 POU4F3 JASPAR yes 118213537
chr1 945857 945873 POU4F2 JASPAR yes 118213538
chr1 945857 945873 POU4F3 JASPAR yes 118213539
chr1 945859 945871 FOXI1 JASPAR yes 118213540
chr1 945859 945873 POU4F1 JASPAR yes 118213541
chr1 945859 945874 HNF1A JASPAR yes 118213542
chr1 945860 945872 FOXC2 JASPAR yes 118213543
chr1 945860 945873 HNF1B JASPAR yes 118213544
chr1 945860 945874 ONECUT2 JASPAR yes 118213545
chr1 945860 945874 ONECUT3 JASPAR yes 118213546
chr1 945860 945874 POU4F1 JASPAR yes 118213547
chr1 945861 945872 FOXB1 JASPAR yes 118213548
chr1 945861 945872 FOXC1 JASPAR yes 118213549
chr1 945861 945872 PROP1 JASPAR yes 118213550
chr1 945861 945877 POU4F2 JASPAR yes 118213551
chr1 945861 945877 POU4F3 JASPAR yes 118213552
chr1 945862 945866 YY1 TRANSFAC yes 118213553
chr1 945862 945877 FOXA1 JASPAR yes 118213554
chr1 945863 945875 FOXI1 JASPAR yes 118213555
chr1 945863 945877 POU4F1 JASPAR yes 118213556
chr1 945863 945878 FOXP1 JASPAR yes 118213557
chr1 945863 945878 HNF1A JASPAR yes 118213558
chr1 945864 945876 FOXC2 JASPAR yes 118213559
chr1 945864 945878 ONECUT2 JASPAR yes 118213560
chr1 945864 945878 ONECUT3 JASPAR yes 118213561
chr1 945865 945876 FOXB1 JASPAR yes 118213562
chr1 945865 945876 FOXC1 JASPAR yes 118213563
chr1 945865 945876 PROP1 JASPAR yes 118213564
chr1 945866 945870 YY1 TRANSFAC yes 118213565
chr1 945867 945879 FOXI1 JASPAR yes 118213566
chr1 945868 945880 FOXC2 JASPAR yes 118213567
chr1 945870 945874 YY1 TRANSFAC yes 118213568
chr1 945872 945886 POU1F1 JASPAR yes 118213569
chr1 945874 945878 YY1 TRANSFAC yes 118213570
chr1 945883 945895 POU2F1 JASPAR yes 118213571
chr1 945883 945897 POU1F1 JASPAR yes 118213572
chr1 945884 945895 FOXB1 JASPAR yes 118213573
chr1 945884 945896 POU3F1 JASPAR yes 118213574
chr1 945884 945897 POU3F3 JASPAR yes 118213575
chr1 945885 945889 YY1 TRANSFAC yes 118213576
chr1 945885 945894 POU5F1B JASPAR yes 118213577
chr1 945885 945896 FOXB1 JASPAR yes 118213578
chr1 945885 945897 POU2F1 JASPAR yes 118213579
chr1 945886 945895 POU5F1B JASPAR yes 118213580
chr1 945888 945902 POU4F1 JASPAR yes 118213581
chr1 945888 945904 POU4F2 JASPAR yes 118213582
chr1 945888 945904 POU4F3 JASPAR yes 118213583
chr1 945891 945905 POU4F1 JASPAR yes 118213584
chr1 945893 945897 YY1 TRANSFAC yes 118213585
chr1 945895 945907 FOXI1 JASPAR yes 118213586
chr1 945895 945910 FOXP1 JASPAR yes 118213587
chr1 945896 945908 FOXC2 JASPAR yes 118213588
chr1 945896 945910 ONECUT3 JASPAR yes 118213589
chr1 945898 945902 YY1 TRANSFAC yes 118213590
chr1 945899 945911 FOXI1 JASPAR yes 118213591
chr1 945900 945912 FOXC2 JASPAR yes 118213592
chr1 945902 945906 YY1 TRANSFAC yes 118213593
chr1 945903 945918 FOXP1 JASPAR yes 118213594
chr1 945904 945915 FOXP2 JASPAR yes 118213595
chr1 945904 945918 FOXF2 JASPAR yes 118213596
chr1 945905 945913 FOXG1 JASPAR yes 118213597
chr1 945905 945913 FOXO3 JASPAR yes 118213598
chr1 945906 945916 HOXA13 JASPAR yes 118213599
chr1 945906 945917 HOXA10 JASPAR yes 118213600
chr1 945907 945916 CDX1 JASPAR yes 118213601
chr1 945907 945918 CDX2 JASPAR yes 118213602
chr1 945914 945922 SP1 TRANSFAC yes 118213603
chr1 945926 945930 NFE TRANSFAC yes 118213604
chr1 945927 945932 GATA2 JASPAR yes 118213605
chr1 945935 945952 ZNF410 JASPAR yes 118213606
chr1 945944 945958 MTF1 JASPAR yes 118213607
chr1 945954 945957 MYB TRANSFAC yes 118213608
chr1 945979 945986 NKX3-1 JASPAR yes 118213609
chr1 945982 946001 PAX5 JASPAR yes 118213610
chr1 945994 946004 SP1 JASPAR yes 118213611
chr1 946007 946010 MYB TRANSFAC yes 118213612
chr1 946007 946018 PHOX2A JASPAR yes 118213613
chr1 946007 946018 PROP1 JASPAR yes 118213614
chr1 946016 946019 MYB TRANSFAC yes 118213615
chr1 946029 946032 MYB TRANSFAC yes 118213616
SNP sites on vista11[chr1:945769-946034]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 945837 rs148645494 A T no 1989
chr1 945861 rs150242145 ATTAT A
FOXB1 FOXC1 FOXC2 FOXI1 HNF1A HNF1B ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1
1990
chr1 945861 rs35187710 ATTAT A
FOXB1 FOXC1 FOXC2 FOXI1 HNF1A HNF1B ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1
1991
chr1 945861 rs4039717 ATTAT A
FOXB1 FOXC1 FOXC2 FOXI1 HNF1A HNF1B ONECUT2 ONECUT3 POU4F1 POU4F2 POU4F3 PROP1
1992
chr1 945911 rs74045077 T C
CDX1 CDX2 FOXC2 FOXF2 FOXG1 FOXI1 FOXO3 FOXP1 FOXP2 HOXA10 HOXA13
1993
chr1 945931 rs368803422 CCTT C
GATA2
1994
chr1 945944 rs74045078 T C
MTF1 ZNF410
1995
Genes possibly regulated by vista11[chr1:945769-946034]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 860260 879955 + SAMD11 ENSG00000187634.6 860260 0.92 1.0 5 14491
chr1 861264 866445 - AL645608.1 ENSG00000268179.1 866445 1.0 1.0 6 20676
chr1 879584 894689 - NOC2L ENSG00000188976.6 894689 0.69 1.0 7 48920
chr1 895967 901095 + KLHL17 ENSG00000187961.9 895967 0.67 1.0 8 50198
chr1 901877 911245 + PLEKHN1 ENSG00000187583.6 901877 0.96 1.0 9 56108
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 71728
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 89783
chr1 948803 949920 + ISG15 ENSG00000187608.5 948803 0.81 1.0 12 97231
chr1 955503 991496 + AGRN ENSG00000188157.9 955503 0.91 1.0 13 90531
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 36347
Expression level of Genes
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miRNAs possibly regulated by vista11[chr1:945769-946034]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results