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- SNP
- rs4039717[chr1:945861]
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
945769 |
946034 |
vista11 |
|
|
Transcript factors that have rs4039717[chr1:945861]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
934818
|
949157
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801762
|
|
|
chr1
|
934818
|
949157
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801763
|
|
|
chr1
|
934818
|
949157
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107801764
|
|
|
chr1
|
945856
|
945870
|
POU4F1
|
JASPAR
|
yes
|
|
118213536
|
|
|
chr1
|
945856
|
945872
|
POU4F3
|
JASPAR
|
yes
|
|
118213537
|
|
|
chr1
|
945857
|
945873
|
POU4F2
|
JASPAR
|
yes
|
|
118213538
|
|
|
chr1
|
945857
|
945873
|
POU4F3
|
JASPAR
|
yes
|
|
118213539
|
|
|
chr1
|
945859
|
945871
|
FOXI1
|
JASPAR
|
yes
|
|
118213540
|
|
|
chr1
|
945859
|
945873
|
POU4F1
|
JASPAR
|
yes
|
|
118213541
|
|
|
chr1
|
945859
|
945874
|
HNF1A
|
JASPAR
|
yes
|
|
118213542
|
|
|
chr1
|
945860
|
945872
|
FOXC2
|
JASPAR
|
yes
|
|
118213543
|
|
|
chr1
|
945860
|
945873
|
HNF1B
|
JASPAR
|
yes
|
|
118213544
|
|
|
chr1
|
945860
|
945874
|
ONECUT2
|
JASPAR
|
yes
|
|
118213545
|
|
|
chr1
|
945860
|
945874
|
ONECUT3
|
JASPAR
|
yes
|
|
118213546
|
|
|
chr1
|
945860
|
945874
|
POU4F1
|
JASPAR
|
yes
|
|
118213547
|
|
|
chr1
|
945861
|
945872
|
FOXB1
|
JASPAR
|
yes
|
|
118213548
|
|
|
chr1
|
945861
|
945872
|
FOXC1
|
JASPAR
|
yes
|
|
118213549
|
|
|
chr1
|
945861
|
945872
|
PROP1
|
JASPAR
|
yes
|
|
118213550
|
|
|
chr1
|
945861
|
945877
|
POU4F2
|
JASPAR
|
yes
|
|
118213551
|
|
|
chr1
|
945861
|
945877
|
POU4F3
|
JASPAR
|
yes
|
|
118213552
|
|
Genes associated with rs4039717[chr1:945861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |