EnhancerDB
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  3. vista113[chr1:3374928-3375314]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista113[chr1:3374928-3375314]
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Tissue distribution of vista113
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Transcription factor that possibly regulate vista113[chr1:3374928-3375314]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 3374927 3374948 REST JASPAR yes 26289957
chr1 3374927 3374948 REST JASPAR yes 118218620
chr1 3374946 3374966 ESR1 JASPAR yes 26289958
chr1 3374946 3374966 ESR1 JASPAR yes 118218621
chr1 3374951 3374970 REST JASPAR yes 26289959
chr1 3374951 3374970 REST JASPAR yes 118218622
chr1 3374962 3374972 MSC JASPAR yes 26289960
chr1 3374962 3374972 MSC JASPAR yes 118218623
chr1 3374982 3374997 NR2C2 JASPAR yes 26289961
chr1 3374982 3374997 NR2C2 JASPAR yes 118218624
chr1 3374982 3375003 ZNF263 JASPAR yes 26289962
chr1 3374982 3375003 ZNF263 JASPAR yes 118218625
chr1 3374993 3374999 SP1 TRANSFAC yes 26289963
chr1 3374993 3374999 SP1 TRANSFAC yes 118218626
chr1 3374993 3375003 SP1 JASPAR yes 26289964
chr1 3374993 3375003 SP1 JASPAR yes 118218627
chr1 3374993 3375014 ZNF263 JASPAR yes 26289965
chr1 3374993 3375014 ZNF263 JASPAR yes 118218628
chr1 3374996 3375017 ZNF263 JASPAR yes 26289966
chr1 3374996 3375017 ZNF263 JASPAR yes 118218629
chr1 3375023 3375034 GCM1 JASPAR yes 26289967
chr1 3375023 3375034 GCM1 JASPAR yes 118218630
chr1 3375039 3375047 FEV JASPAR yes 26289968
chr1 3375039 3375047 FEV JASPAR yes 118218631
chr1 3375041 3375055 STAT1 JASPAR yes 26289969
chr1 3375041 3375055 STAT1 JASPAR yes 118218632
chr1 3375041 3375056 PRDM1 JASPAR yes 26289970
chr1 3375041 3375056 STAT2 JASPAR yes 26289971
chr1 3375041 3375056 PRDM1 JASPAR yes 118218633
chr1 3375041 3375056 STAT2 JASPAR yes 118218634
chr1 3375044 3375054 NFATC3 JASPAR yes 26289972
chr1 3375044 3375054 NFATC3 JASPAR yes 118218635
chr1 3375094 3375099 GATA2 JASPAR yes 26289973
chr1 3375094 3375099 GATA2 JASPAR yes 118218636
chr1 3375109 3375129 PPARG JASPAR yes 26289974
chr1 3375109 3375129 PPARG JASPAR yes 118218637
chr1 3375120 3375124 H4TF2 TRANSFAC yes 26289975
chr1 3375120 3375124 H4TF2 TRANSFAC yes 118218638
chr1 3375122 3375136 PLAG1 JASPAR yes 26289976
chr1 3375122 3375136 PLAG1 JASPAR yes 118218639
chr1 3375139 3375143 ESR1 TRANSFAC yes 26289977
chr1 3375139 3375143 ESR1 TRANSFAC yes 118218640
chr1 3375143 3375155 PKNOX1 JASPAR yes 26289978
chr1 3375143 3375155 PKNOX1 JASPAR yes 118218641
chr1 3375144 3375154 ID4 JASPAR yes 26289979
chr1 3375144 3375154 MSC JASPAR yes 26289980
chr1 3375144 3375154 TCF3 JASPAR yes 26289981
chr1 3375144 3375154 ID4 JASPAR yes 118218642
chr1 3375144 3375154 MSC JASPAR yes 118218643
chr1 3375144 3375154 TCF3 JASPAR yes 118218644
chr1 3375145 3375154 SNAI2 JASPAR yes 26289982
chr1 3375145 3375154 SNAI2 JASPAR yes 118218645
chr1 3375146 3375151 USF2 TRANSFAC yes 26289983
chr1 3375146 3375151 USF2 TRANSFAC yes 118218646
chr1 3375164 3375179 HNF4A JASPAR yes 26289984
chr1 3375164 3375179 HNF4A JASPAR yes 118218647
chr1 3375173 3375187 GLIS2 JASPAR yes 26289985
chr1 3375173 3375187 GLIS3 JASPAR yes 26289986
chr1 3375173 3375187 GLIS2 JASPAR yes 118218648
chr1 3375173 3375187 GLIS3 JASPAR yes 118218649
chr1 3375174 3375185 E2F4 JASPAR yes 26289987
chr1 3375174 3375185 E2F6 JASPAR yes 26289988
chr1 3375174 3375185 E2F4 JASPAR yes 118218650
chr1 3375174 3375185 E2F6 JASPAR yes 118218651
chr1 3375174 3375188 E2F7 JASPAR yes 26289989
chr1 3375174 3375188 E2F7 JASPAR yes 118218652
chr1 3375175 3375186 E2F1 JASPAR yes 26289990
chr1 3375175 3375186 E2F1 JASPAR yes 118218653
chr1 3375177 3375188 YY2 JASPAR yes 26289991
chr1 3375177 3375188 YY2 JASPAR yes 118218654
chr1 3375181 3375187 YY1 JASPAR yes 26289992
chr1 3375181 3375187 YY1 JASPAR yes 118218655
chr1 3375181 3375193 SRF JASPAR yes 26289993
chr1 3375181 3375193 SRF JASPAR yes 118218656
chr1 3375194 3375198 NFE TRANSFAC yes 26289994
chr1 3375194 3375198 NFE TRANSFAC yes 118218657
chr1 3375214 3375226 PBX1 JASPAR yes 26289995
chr1 3375214 3375226 PBX1 JASPAR yes 118218658
chr1 3375218 3375238 RREB1 JASPAR yes 26289996
chr1 3375218 3375238 RREB1 JASPAR yes 118218659
chr1 3375221 3375233 ZBTB7C JASPAR yes 26289997
chr1 3375221 3375233 ZBTB7C JASPAR yes 118218660
chr1 3375231 3375244 ZBTB18 JASPAR yes 26289998
chr1 3375231 3375244 ZBTB18 JASPAR yes 118218661
chr1 3375233 3375245 TAL1 JASPAR yes 26289999
chr1 3375233 3375245 TAL1 JASPAR yes 118218662
chr1 3375245 3375256 NFKB1 JASPAR yes 26290000
chr1 3375245 3375256 NFKB1 JASPAR yes 118218663
chr1 3375258 3375271 SMAD2 JASPAR yes 26290001
chr1 3375258 3375271 SMAD2 JASPAR yes 118218664
chr1 3375262 3375277 HNF4G JASPAR yes 26290002
chr1 3375262 3375277 HNF4G JASPAR yes 118218665
chr1 3375263 3375278 HNF4A JASPAR yes 26290003
chr1 3375263 3375278 HNF4A JASPAR yes 118218666
chr1 3375279 3375300 ZNF263 JASPAR yes 26290004
chr1 3375279 3375300 ZNF263 JASPAR yes 118218667
chr1 3375281 3375286 SP1 TRANSFAC yes 26290005
chr1 3375281 3375286 SP1 TRANSFAC yes 118218668
chr1 3375288 3375302 SPI1 JASPAR yes 26290006
chr1 3375288 3375302 SPI1 JASPAR yes 118218669
chr1 3375289 3375302 ELF1 JASPAR yes 26290007
chr1 3375289 3375302 ELF1 JASPAR yes 118218670
chr1 3375290 3375302 EHF JASPAR yes 26290008
chr1 3375290 3375302 EHF JASPAR yes 118218671
chr1 3375290 3375303 ELF3 JASPAR yes 26290009
chr1 3375290 3375303 ELF3 JASPAR yes 118218672
chr1 3375291 3375302 ELF5 JASPAR yes 26290010
chr1 3375291 3375302 ELF5 JASPAR yes 118218673
chr1 3375292 3375298 PEA3 TRANSFAC yes 26290011
chr1 3375292 3375298 PEA3 TRANSFAC yes 118218674
chr1 3375292 3375302 ETV6 JASPAR yes 26290012
chr1 3375292 3375302 ETV6 JASPAR yes 118218675
chr1 3375292 3375303 FLI1 JASPAR yes 26290013
chr1 3375292 3375303 FLI1 JASPAR yes 118218676
chr1 3375293 3375301 EHF JASPAR yes 26290014
chr1 3375293 3375301 EHF JASPAR yes 118218677
chr1 3375294 3375301 SPI1 JASPAR yes 26290015
chr1 3375294 3375301 SPI1 JASPAR yes 118218678
SNP sites on vista113[chr1:3374928-3375314]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 3374936 rs547676458 C T
REST
22211
chr1 3374943 rs56242281 A G
REST
22212
chr1 3375022 rs535102933 G A no 22213
chr1 3375027 rs149407958 C T
GCM1
22214
chr1 3375157 rs184801570 C A no 22215
chr1 3375181 rs947352 C T
E2F1 E2F4 E2F6 E2F7 GLIS2 GLIS3 SRF YY1 YY2
22216
chr1 3375250 rs541553664 A G
NFKB1
22217
chr1 3375296 rs112632536 G A
EHF ELF1 ELF3 ELF5 ETV6 FLI1 PEA3 SPI1 ZNF263
22218
Genes possibly regulated by vista113[chr1:3374928-3375314]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 3370990 3397677 + ARHGEF16 ENSG00000130762.10 3370990 0.88 1.0 75 96062
Expression level of Genes
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miRNAs possibly regulated by vista113[chr1:3374928-3375314]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results