EnhancerDB
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  3. rs541553664[chr1:3375250]
Enhancers that have rs541553664[chr1:3375250]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3372785 3379455 enh11430
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Placenta Colon (HCT116) Pancreas Muscle (Myotube)
chr1 3374928 3375314 vista113
VISTA
Transcript factors that have rs541553664[chr1:3375250]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3373584 3375371 TCF7L2 GTRD no Colon (HCT116) 107801859
chr1 3375245 3375256 NFKB1 JASPAR yes 26290000
chr1 3375245 3375256 NFKB1 JASPAR yes 118218663
Genes associated with rs541553664[chr1:3375250], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More