EnhancerDB
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  3. vista1135[chr1:33450600-33450837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1135[chr1:33450600-33450837]
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Tissue distribution of vista1135
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Transcription factor that possibly regulate vista1135[chr1:33450600-33450837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 33450602 33450617 HNF4A JASPAR yes 28019303
chr1 33450602 33450617 HNF4A JASPAR yes 118269223
chr1 33450633 33450641 HOXA5 JASPAR yes 28019304
chr1 33450633 33450641 HOXA5 JASPAR yes 118269224
chr1 33450634 33450644 NOTO JASPAR yes 28019305
chr1 33450634 33450644 NOTO JASPAR yes 118269225
chr1 33450647 33450659 ZBTB7C JASPAR yes 28019306
chr1 33450647 33450659 ZBTB7C JASPAR yes 118269226
chr1 33450670 33450684 EBF1 JASPAR yes 28019307
chr1 33450670 33450684 EBF1 JASPAR yes 118269227
chr1 33450671 33450677 MZF1 JASPAR yes 28019308
chr1 33450671 33450677 MZF1 JASPAR yes 118269228
chr1 33450671 33450682 EBF1 JASPAR yes 28019309
chr1 33450671 33450682 EBF1 JASPAR yes 118269229
chr1 33450672 33450683 EBF1 JASPAR yes 28019310
chr1 33450672 33450683 EBF1 JASPAR yes 118269230
chr1 33450677 33450682 TFAP2A TRANSFAC yes 28019311
chr1 33450677 33450682 TFAP2A TRANSFAC yes 118269231
chr1 33450677 33450683 MZF1 JASPAR yes 28019312
chr1 33450677 33450683 MZF1 JASPAR yes 118269232
chr1 33450677 33450690 NFKB1 JASPAR yes 28019313
chr1 33450677 33450690 NFKB2 JASPAR yes 28019314
chr1 33450677 33450690 NFKB1 JASPAR yes 118269233
chr1 33450677 33450690 NFKB2 JASPAR yes 118269234
chr1 33450678 33450688 REL JASPAR yes 28019315
chr1 33450678 33450688 REL JASPAR yes 118269235
chr1 33450678 33450689 NFKB1 JASPAR yes 28019316
chr1 33450678 33450689 NFKB1 JASPAR yes 118269236
chr1 33450679 33450689 NFKB1 JASPAR yes 28019317
chr1 33450679 33450689 RELA JASPAR yes 28019318
chr1 33450679 33450689 REL JASPAR yes 28019319
chr1 33450679 33450689 NFKB1 JASPAR yes 118269237
chr1 33450679 33450689 RELA JASPAR yes 118269238
chr1 33450679 33450689 REL JASPAR yes 118269239
chr1 33450679 33450690 NFKB1 JASPAR yes 28019320
chr1 33450679 33450690 NFKB1 JASPAR yes 118269240
chr1 33450680 33450689 NF-kappaB TRANSFAC yes 28019321
chr1 33450680 33450689 NF-kappaB TRANSFAC yes 118269241
chr1 33450683 33450691 FEV JASPAR yes 28019322
chr1 33450683 33450691 FEV JASPAR yes 118269242
chr1 33450721 33450734 NFKB2 JASPAR yes 28019323
chr1 33450721 33450734 NFKB2 JASPAR yes 118269243
chr1 33450721 33450740 RFX2 JASPAR yes 28019324
chr1 33450721 33450740 RFX2 JASPAR yes 118269244
chr1 33450722 33450732 REL JASPAR yes 28019325
chr1 33450722 33450732 REL JASPAR yes 118269245
chr1 33450722 33450733 NFKB1 JASPAR yes 28019326
chr1 33450722 33450733 NFKB1 JASPAR yes 118269246
chr1 33450769 33450780 DUX4 JASPAR yes 28019327
chr1 33450769 33450780 DUX4 JASPAR yes 118269247
chr1 33450807 33450825 NFYA JASPAR yes 28019328
chr1 33450807 33450825 NFYA JASPAR yes 118269248
chr1 33450810 33450820 UEF2 TRANSFAC yes 28019329
chr1 33450810 33450820 UEF2 TRANSFAC yes 118269249
chr1 33450810 33450826 SOX8 JASPAR yes 28019330
chr1 33450810 33450826 SOX8 JASPAR yes 118269250
chr1 33450813 33450834 MAFG JASPAR yes 28019331
chr1 33450813 33450834 MAFG JASPAR yes 118269251
chr1 33450825 33450828 MYB TRANSFAC yes 28019332
chr1 33450825 33450828 MYB TRANSFAC yes 118269252
chr1 33450825 33450846 IRF1 JASPAR yes 28019333
chr1 33450825 33450846 IRF1 JASPAR yes 118269253
chr1 33450827 33450842 PRDM1 JASPAR yes 28019334
chr1 33450827 33450842 PRDM1 JASPAR yes 118269254
chr1 33450828 33450832 YY1 TRANSFAC yes 28019335
chr1 33450828 33450832 YY1 TRANSFAC yes 118269255
chr1 33450835 33450839 YY1 TRANSFAC yes 28019336
chr1 33450835 33450839 YY1 TRANSFAC yes 118269256
SNP sites on vista1135[chr1:33450600-33450837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 33450632 rs17511198 C T no 221324
chr1 33450635 rs564340160 A C
HOXA5 NOTO
221325
chr1 33450684 rs146025839 A G
EBF1 FEV NF-kappaB NFKB1 NFKB2 REL RELA
221326
Genes possibly regulated by vista1135[chr1:33450600-33450837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 33351595 33364042 + HPCA ENSG00000121905.5 33351595 0.81 1.0 469 995
chr1 33360195 33367039 - TMEM54 ENSG00000121900.14 33367039 0.81 1.0 470 16439
chr1 33402046 33430286 - RNF19B ENSG00000116514.12 33430286 0.66 1.0 471 79686
chr1 33439268 33439642 + FKSG48 ENSG00000267885.1 33439268 0.84 1.0 472 88668
chr1 33473585 33546597 - AK2 ENSG00000004455.12 33546597 0.77 1.0 473 4240
chr1 33546705 33586131 + ADC ENSG00000142920.12 33546705 0.69 1.0 474 4132
Expression level of Genes
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miRNAs possibly regulated by vista1135[chr1:33450600-33450837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results