EnhancerDB
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  3. rs564340160[chr1:33450635]
Enhancers that have rs564340160[chr1:33450635]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33442929 33472683 enh216
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Heart
chr1 33450600 33450837 vista1135
VISTA
Transcript factors that have rs564340160[chr1:33450635]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33450633 33450641 HOXA5 JASPAR yes 28019304
chr1 33450633 33450641 HOXA5 JASPAR yes 118269224
chr1 33450634 33450644 NOTO JASPAR yes 28019305
chr1 33450634 33450644 NOTO JASPAR yes 118269225
Genes associated with rs564340160[chr1:33450635], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More