EnhancerDB
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  3. vista1198[chr1:36840093-36840535]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1198[chr1:36840093-36840535]
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Tissue distribution of vista1198
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Transcription factor that possibly regulate vista1198[chr1:36840093-36840535]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 36839166 36840713 POLR2A UCSC Txn Factor no Conserved 107802839
chr1 36839166 36840713 POLR2A UCSC Txn Factor no Conserved 107802840
chr1 36840117 36840121 LFA1 TRANSFAC yes 28137501
chr1 36840117 36840121 LFA1 TRANSFAC yes 118272189
chr1 36840145 36840155 MZF1 JASPAR yes 28137502
chr1 36840145 36840155 MZF1 JASPAR yes 118272190
chr1 36840148 36840154 SP1 TRANSFAC yes 28137503
chr1 36840148 36840154 SP1 TRANSFAC yes 118272191
chr1 36840148 36840158 SP1 JASPAR yes 28137504
chr1 36840148 36840158 SP1 JASPAR yes 118272192
chr1 36840150 36840164 EBF1 JASPAR yes 28137505
chr1 36840150 36840164 EBF1 JASPAR yes 118272193
chr1 36840151 36840162 EBF1 JASPAR yes 28137506
chr1 36840151 36840162 EBF1 JASPAR yes 118272194
chr1 36840161 36840171 ELK1 JASPAR yes 28137507
chr1 36840161 36840171 ELK1 JASPAR yes 118272195
chr1 36840163 36840172 ELK4 JASPAR yes 28137508
chr1 36840163 36840172 ELK4 JASPAR yes 118272196
chr1 36840163 36840173 ELK1 JASPAR yes 28137509
chr1 36840163 36840173 ELK3 JASPAR yes 28137510
chr1 36840163 36840173 ERG JASPAR yes 28137511
chr1 36840163 36840173 ETV1 JASPAR yes 28137512
chr1 36840163 36840173 ETV4 JASPAR yes 28137513
chr1 36840163 36840173 ETV5 JASPAR yes 28137514
chr1 36840163 36840173 FEV JASPAR yes 28137515
chr1 36840163 36840173 FLI1 JASPAR yes 28137516
chr1 36840163 36840173 ELK1 JASPAR yes 118272197
chr1 36840163 36840173 ELK3 JASPAR yes 118272198
chr1 36840163 36840173 ERG JASPAR yes 118272199
chr1 36840163 36840173 ETV1 JASPAR yes 118272200
chr1 36840163 36840173 ETV4 JASPAR yes 118272201
chr1 36840163 36840173 ETV5 JASPAR yes 118272202
chr1 36840163 36840173 FEV JASPAR yes 118272203
chr1 36840163 36840173 FLI1 JASPAR yes 118272204
chr1 36840163 36840174 ELK4 JASPAR yes 28137517
chr1 36840163 36840174 ELK4 JASPAR yes 118272205
chr1 36840165 36840171 ETS1 JASPAR yes 28137518
chr1 36840165 36840171 SPI1 JASPAR yes 28137519
chr1 36840165 36840171 ETS1 JASPAR yes 118272206
chr1 36840165 36840171 SPI1 JASPAR yes 118272207
chr1 36840168 36840180 NHLH1 JASPAR yes 28137520
chr1 36840168 36840180 NHLH1 JASPAR yes 118272208
chr1 36840169 36840179 NHLH1 JASPAR yes 28137521
chr1 36840169 36840179 TFAP4 JASPAR yes 28137522
chr1 36840169 36840179 NHLH1 JASPAR yes 118272209
chr1 36840169 36840179 TFAP4 JASPAR yes 118272210
chr1 36840174 36840184 SREBF2 JASPAR yes 28137523
chr1 36840174 36840184 SREBF2 JASPAR yes 118272211
chr1 36840183 36840195 FOXI1 JASPAR yes 28137524
chr1 36840183 36840195 FOXI1 JASPAR yes 118272212
chr1 36840194 36840198 NFE TRANSFAC yes 28137525
chr1 36840194 36840198 NFE TRANSFAC yes 118272213
chr1 36840218 36840224 PEA3 TRANSFAC yes 28137526
chr1 36840218 36840224 PEA3 TRANSFAC yes 118272214
chr1 36840218 36840228 SP1 JASPAR yes 28137527
chr1 36840218 36840228 SP1 JASPAR yes 118272215
chr1 36840218 36840229 FLI1 JASPAR yes 28137528
chr1 36840218 36840229 FLI1 JASPAR yes 118272216
chr1 36840219 36840227 EHF JASPAR yes 28137529
chr1 36840219 36840227 EHF JASPAR yes 118272217
chr1 36840263 36840270 E2F1 TRANSFAC yes 28137530
chr1 36840263 36840270 E2F1 TRANSFAC yes 118272218
chr1 36840325 36840335 RUNX3 JASPAR yes 28137531
chr1 36840325 36840335 RUNX3 JASPAR yes 118272219
chr1 36840377 36840391 JUN JASPAR yes 28137532
chr1 36840377 36840391 JUN JASPAR yes 118272220
chr1 36840379 36840390 BATF JASPAR yes 28137533
chr1 36840379 36840390 BATF JASPAR yes 118272221
chr1 36840381 36840392 FOS JASPAR yes 28137534
chr1 36840381 36840392 FOSL1 JASPAR yes 28137535
chr1 36840381 36840392 JUND JASPAR yes 28137536
chr1 36840381 36840392 FOS JASPAR yes 118272222
chr1 36840381 36840392 FOSL1 JASPAR yes 118272223
chr1 36840381 36840392 JUND JASPAR yes 118272224
chr1 36840382 36840393 FOSL2 JASPAR yes 28137537
chr1 36840382 36840393 JUNB JASPAR yes 28137538
chr1 36840382 36840393 FOSL2 JASPAR yes 118272225
chr1 36840382 36840393 JUNB JASPAR yes 118272226
chr1 36840382 36840396 JUN JASPAR yes 28137539
chr1 36840382 36840396 JUN JASPAR yes 118272227
chr1 36840399 36840419 ESR1 JASPAR yes 28137540
chr1 36840399 36840419 ESR1 JASPAR yes 118272228
chr1 36840402 36840420 RARA JASPAR yes 28137541
chr1 36840402 36840420 RARA JASPAR yes 118272229
chr1 36840403 36840411 MEIS2 JASPAR yes 28137542
chr1 36840403 36840411 MEIS3 JASPAR yes 28137543
chr1 36840403 36840411 MEIS2 JASPAR yes 118272230
chr1 36840403 36840411 MEIS3 JASPAR yes 118272231
chr1 36840403 36840420 ESR1 JASPAR yes 28137544
chr1 36840403 36840420 ESR1 JASPAR yes 118272232
chr1 36840404 36840408 NFE TRANSFAC yes 28137545
chr1 36840404 36840408 NFE TRANSFAC yes 118272233
chr1 36840428 36840432 YY1 TRANSFAC yes 28137546
chr1 36840428 36840432 YY1 TRANSFAC yes 118272234
chr1 36840452 36840466 GLIS3 JASPAR yes 28137547
chr1 36840452 36840466 GLIS3 JASPAR yes 118272235
chr1 36840455 36840475 TP53 JASPAR yes 28137548
chr1 36840455 36840475 TP53 JASPAR yes 118272236
chr1 36840462 36840466 H4TF2 TRANSFAC yes 28137549
chr1 36840462 36840466 H4TF2 TRANSFAC yes 118272237
chr1 36840466 36840481 TP53 JASPAR yes 28137550
chr1 36840466 36840481 TP53 JASPAR yes 118272238
chr1 36840473 36840477 LFA1 TRANSFAC yes 28137551
chr1 36840473 36840477 LFA1 TRANSFAC yes 118272239
chr1 36840474 36840484 TFEB JASPAR yes 28137552
chr1 36840474 36840484 TFEC JASPAR yes 28137553
chr1 36840474 36840484 TFEB JASPAR yes 118272240
chr1 36840474 36840484 TFEC JASPAR yes 118272241
chr1 36840474 36840485 USF1 JASPAR yes 28137554
chr1 36840474 36840485 USF2 JASPAR yes 28137555
chr1 36840474 36840485 USF1 JASPAR yes 118272242
chr1 36840474 36840485 USF2 JASPAR yes 118272243
chr1 36840479 36840486 JUN TRANSFAC yes 28137556
chr1 36840479 36840486 JUN TRANSFAC yes 118272244
chr1 36840508 36840521 SCRT2 JASPAR yes 28137557
chr1 36840508 36840521 SCRT2 JASPAR yes 118272245
chr1 36840509 36840514 MYC TRANSFAC yes 28137558
chr1 36840509 36840514 MYC TRANSFAC yes 118272246
chr1 36840518 36840524 SOX10 JASPAR yes 28137559
chr1 36840518 36840524 SOX10 JASPAR yes 118272247
chr1 36840522 36840536 JUN JASPAR yes 28137560
chr1 36840522 36840536 JUN JASPAR yes 118272248
chr1 36840525 36840536 FOSL2 JASPAR yes 28137561
chr1 36840525 36840536 JUNB JASPAR yes 28137562
chr1 36840525 36840536 FOSL2 JASPAR yes 118272249
chr1 36840525 36840536 JUNB JASPAR yes 118272250
chr1 36840526 36840537 FOS JASPAR yes 28137563
chr1 36840526 36840537 FOSL1 JASPAR yes 28137564
chr1 36840526 36840537 JUND JASPAR yes 28137565
chr1 36840526 36840537 FOS JASPAR yes 118272251
chr1 36840526 36840537 FOSL1 JASPAR yes 118272252
chr1 36840526 36840537 JUND JASPAR yes 118272253
chr1 36840527 36840534 JUN TRANSFAC yes 28137566
chr1 36840527 36840534 JUN TRANSFAC yes 118272254
chr1 36840527 36840541 JUN JASPAR yes 28137567
chr1 36840527 36840541 JUN JASPAR yes 118272255
chr1 36840528 36840539 BATF JASPAR yes 28137568
chr1 36840528 36840539 BATF JASPAR yes 118272256
SNP sites on vista1198[chr1:36840093-36840535]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 36840167 rs144415933 G A
ELK1 ELK3 ELK4 ERG ETS1 ETV1 ETV4 ETV5 FEV FLI1 POLR2A SPI1
233346
chr1 36840265 rs56409909 T C
E2F1 POLR2A
233347
chr1 36840288 rs116177592 A G
POLR2A
233348
chr1 36840462 rs143538980 A T
GLIS3 H4TF2 POLR2A TP53
233349
chr1 36840464 rs55811039 G A
GLIS3 H4TF2 POLR2A TP53
233350
chr1 36840477 rs574071247 C G
LFA1 POLR2A TFEB TFEC TP53 USF1 USF2
233351
Genes possibly regulated by vista1198[chr1:36840093-36840535]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 36771988 36790484 + SH3D21 ENSG00000214193.5 36771988 0.91 1.0 510 31895
chr1 36787632 36789755 - EVA1B ENSG00000142694.6 36789755 0.7 1.0 511 49662
chr1 36789335 36794822 + RP11-268J15.5 ENSG00000116883.8 36789335 0.9 1.0 512 49242
chr1 36805225 36851497 - STK40 ENSG00000196182.6 36851497 0.61 1.0 513 89038
chr1 36856839 36863493 - LSM10 ENSG00000181817.5 36863493 0.63 1.0 514 77042
chr1 36881428 36916086 - OSCP1 ENSG00000116885.14 36916086 0.79 1.0 515 24449
chr1 36921319 36930038 - MRPS15 ENSG00000116898.7 36930038 0.76 0.99 516 10497
Expression level of Genes
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miRNAs possibly regulated by vista1198[chr1:36840093-36840535]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results