EnhancerDB
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  3. rs143538980[chr1:36840462]
Enhancers that have rs143538980[chr1:36840462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36829025 36848015 enh242
Bone Marrow (K562) Liver (HepG2) Blood (OCI-LY7) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell) Heart
chr1 36840093 36840535 vista1198
VISTA
Transcript factors that have rs143538980[chr1:36840462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36839166 36840713 POLR2A UCSC Txn Factor no Conserved 107802839
chr1 36839166 36840713 POLR2A UCSC Txn Factor no Conserved 107802840
chr1 36840452 36840466 GLIS3 JASPAR yes 28137547
chr1 36840452 36840466 GLIS3 JASPAR yes 118272235
chr1 36840455 36840475 TP53 JASPAR yes 28137548
chr1 36840455 36840475 TP53 JASPAR yes 118272236
chr1 36840462 36840466 H4TF2 TRANSFAC yes 28137549
chr1 36840462 36840466 H4TF2 TRANSFAC yes 118272237
Genes associated with rs143538980[chr1:36840462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More