EnhancerDB
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  3. vista1275[chr1:40264988-40265120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1275[chr1:40264988-40265120]
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Tissue distribution of vista1275
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Transcription factor that possibly regulate vista1275[chr1:40264988-40265120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40264987 40264998 CDX2 JASPAR yes 28291457
chr1 40264987 40264998 CDX2 JASPAR yes 118276136
chr1 40264988 40264998 MNX1 JASPAR yes 28291458
chr1 40264988 40264998 MNX1 JASPAR yes 118276137
chr1 40264988 40264999 HOXA10 JASPAR yes 28291459
chr1 40264988 40264999 HOXA10 JASPAR yes 118276138
chr1 40264989 40264998 CDX1 JASPAR yes 28291460
chr1 40264989 40264998 CDX1 JASPAR yes 118276139
chr1 40264989 40264999 HOXA13 JASPAR yes 28291461
chr1 40264989 40264999 HOXB13 JASPAR yes 28291462
chr1 40264989 40264999 HOXD13 JASPAR yes 28291463
chr1 40264989 40264999 HOXA13 JASPAR yes 118276140
chr1 40264989 40264999 HOXB13 JASPAR yes 118276141
chr1 40264989 40264999 HOXD13 JASPAR yes 118276142
chr1 40265002 40265014 ZBTB7A JASPAR yes 28291464
chr1 40265002 40265014 ZBTB7A JASPAR yes 118276143
chr1 40265003 40265018 RUNX2 JASPAR yes 28291465
chr1 40265003 40265018 RUNX2 JASPAR yes 118276144
chr1 40265006 40265026 ESR1 JASPAR yes 28291466
chr1 40265006 40265026 ESR1 JASPAR yes 118276145
chr1 40265015 40265029 STAT1 JASPAR yes 28291467
chr1 40265015 40265029 STAT1 JASPAR yes 118276146
chr1 40265020 40265031 ELK4 JASPAR yes 28291468
chr1 40265020 40265031 FLI1 JASPAR yes 28291469
chr1 40265020 40265031 ELK4 JASPAR yes 118276147
chr1 40265020 40265031 FLI1 JASPAR yes 118276148
chr1 40265020 40265033 ELF3 JASPAR yes 28291470
chr1 40265020 40265033 ELF3 JASPAR yes 118276149
chr1 40265021 40265031 ELK1 JASPAR yes 28291471
chr1 40265021 40265031 ELK3 JASPAR yes 28291472
chr1 40265021 40265031 ERF JASPAR yes 28291473
chr1 40265021 40265031 ERG JASPAR yes 28291474
chr1 40265021 40265031 ETS1 JASPAR yes 28291475
chr1 40265021 40265031 ETV1 JASPAR yes 28291476
chr1 40265021 40265031 ETV3 JASPAR yes 28291477
chr1 40265021 40265031 ETV4 JASPAR yes 28291478
chr1 40265021 40265031 ETV5 JASPAR yes 28291479
chr1 40265021 40265031 ETV6 JASPAR yes 28291480
chr1 40265021 40265031 FEV JASPAR yes 28291481
chr1 40265021 40265031 FLI1 JASPAR yes 28291482
chr1 40265021 40265031 ELK1 JASPAR yes 118276150
chr1 40265021 40265031 ELK3 JASPAR yes 118276151
chr1 40265021 40265031 ERF JASPAR yes 118276152
chr1 40265021 40265031 ERG JASPAR yes 118276153
chr1 40265021 40265031 ETS1 JASPAR yes 118276154
chr1 40265021 40265031 ETV1 JASPAR yes 118276155
chr1 40265021 40265031 ETV3 JASPAR yes 118276156
chr1 40265021 40265031 ETV4 JASPAR yes 118276157
chr1 40265021 40265031 ETV5 JASPAR yes 118276158
chr1 40265021 40265031 ETV6 JASPAR yes 118276159
chr1 40265021 40265031 FEV JASPAR yes 118276160
chr1 40265021 40265031 FLI1 JASPAR yes 118276161
chr1 40265021 40265032 ELF5 JASPAR yes 28291483
chr1 40265021 40265032 ELF5 JASPAR yes 118276162
chr1 40265021 40265033 EHF JASPAR yes 28291484
chr1 40265021 40265033 ELF1 JASPAR yes 28291485
chr1 40265021 40265033 ELF4 JASPAR yes 28291486
chr1 40265021 40265033 EHF JASPAR yes 118276163
chr1 40265021 40265033 ELF1 JASPAR yes 118276164
chr1 40265021 40265033 ELF4 JASPAR yes 118276165
chr1 40265021 40265034 ELF1 JASPAR yes 28291487
chr1 40265021 40265034 ELF1 JASPAR yes 118276166
chr1 40265022 40265030 FEV JASPAR yes 28291488
chr1 40265022 40265030 FEV JASPAR yes 118276167
chr1 40265022 40265031 ELK4 JASPAR yes 28291489
chr1 40265022 40265031 ELK4 JASPAR yes 118276168
chr1 40265023 40265029 ETS1 JASPAR yes 28291490
chr1 40265023 40265029 SPI1 JASPAR yes 28291491
chr1 40265023 40265029 ETS1 JASPAR yes 118276169
chr1 40265023 40265029 SPI1 JASPAR yes 118276170
chr1 40265023 40265038 HSF1 JASPAR yes 28291492
chr1 40265023 40265038 HSF1 JASPAR yes 118276171
chr1 40265024 40265037 HSF2 JASPAR yes 28291493
chr1 40265024 40265037 HSF2 JASPAR yes 118276172
chr1 40265027 40265033 ETS1 JASPAR yes 28291494
chr1 40265027 40265033 ETS1 JASPAR yes 118276173
chr1 40265027 40265038 NFKB1 JASPAR yes 28291495
chr1 40265027 40265038 NFKB1 JASPAR yes 118276174
chr1 40265028 40265038 NFKB1 JASPAR yes 28291496
chr1 40265028 40265038 RELA JASPAR yes 28291497
chr1 40265028 40265038 REL JASPAR yes 28291498
chr1 40265028 40265038 NFKB1 JASPAR yes 118276175
chr1 40265028 40265038 RELA JASPAR yes 118276176
chr1 40265028 40265038 REL JASPAR yes 118276177
chr1 40265039 40265043 NFE TRANSFAC yes 28291499
chr1 40265039 40265043 NFE TRANSFAC yes 118276178
chr1 40265040 40265050 MAX JASPAR yes 28291500
chr1 40265040 40265050 MAX JASPAR yes 118276179
chr1 40265040 40265051 USF1 JASPAR yes 28291501
chr1 40265040 40265051 USF2 JASPAR yes 28291502
chr1 40265040 40265051 USF1 JASPAR yes 118276180
chr1 40265040 40265051 USF2 JASPAR yes 118276181
chr1 40265040 40265052 HES7 JASPAR yes 28291503
chr1 40265040 40265052 HES7 JASPAR yes 118276182
chr1 40265041 40265051 BHLHE40 JASPAR yes 28291504
chr1 40265041 40265051 BHLHE41 JASPAR yes 28291505
chr1 40265041 40265051 HEY1 JASPAR yes 28291506
chr1 40265041 40265051 HEY2 JASPAR yes 28291507
chr1 40265041 40265051 MAX JASPAR yes 28291508
chr1 40265041 40265051 MLXIPL JASPAR yes 28291509
chr1 40265041 40265051 MLX JASPAR yes 28291510
chr1 40265041 40265051 MNT JASPAR yes 28291511
chr1 40265041 40265051 SREBF2 JASPAR yes 28291512
chr1 40265041 40265051 TFE3 JASPAR yes 28291513
chr1 40265041 40265051 TFEB JASPAR yes 28291514
chr1 40265041 40265051 TFEC JASPAR yes 28291515
chr1 40265041 40265051 BHLHE40 JASPAR yes 118276183
chr1 40265041 40265051 BHLHE41 JASPAR yes 118276184
chr1 40265041 40265051 HEY1 JASPAR yes 118276185
chr1 40265041 40265051 HEY2 JASPAR yes 118276186
chr1 40265041 40265051 MAX JASPAR yes 118276187
chr1 40265041 40265051 MLXIPL JASPAR yes 118276188
chr1 40265041 40265051 MLX JASPAR yes 118276189
chr1 40265041 40265051 MNT JASPAR yes 118276190
chr1 40265041 40265051 SREBF2 JASPAR yes 118276191
chr1 40265041 40265051 TFE3 JASPAR yes 118276192
chr1 40265041 40265051 TFEB JASPAR yes 118276193
chr1 40265041 40265051 TFEC JASPAR yes 118276194
chr1 40265042 40265052 MAX JASPAR yes 28291516
chr1 40265042 40265052 MAX JASPAR yes 118276195
chr1 40265043 40265048 MYC TRANSFAC yes 28291517
chr1 40265043 40265048 USF1 TRANSFAC yes 28291518
chr1 40265043 40265048 USF2 TRANSFAC yes 28291519
chr1 40265043 40265048 MYC TRANSFAC yes 118276196
chr1 40265043 40265048 USF1 TRANSFAC yes 118276197
chr1 40265043 40265048 USF2 TRANSFAC yes 118276198
chr1 40265047 40265064 BCL6B JASPAR yes 28291520
chr1 40265047 40265064 BCL6B JASPAR yes 118276199
chr1 40265061 40265072 TBX20 JASPAR yes 28291521
chr1 40265061 40265072 TBX20 JASPAR yes 118276200
chr1 40265066 40265071 MYC TRANSFAC yes 28291522
chr1 40265066 40265071 MYC TRANSFAC yes 118276201
SNP sites on vista1275[chr1:40264988-40265120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40265007 rs539994869 A G
ESR1 RUNX2 ZBTB7A
250708
chr1 40265078 rs580441 T C no 250709
chr1 40265093 rs115259171 C A no 250710
Genes possibly regulated by vista1275[chr1:40264988-40265120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40222854 40254533 - BMP8B ENSG00000116985.6 40254533 0.81 1.0 552 89545
chr1 40235195 40237020 - OXCT2 ENSG00000198754.5 40237020 0.82 1.0 553 72032
chr1 40306723 40349183 - TRIT1 ENSG00000043514.11 40349183 0.61 0.99 554 15937
Expression level of Genes
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miRNAs possibly regulated by vista1275[chr1:40264988-40265120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results