EnhancerDB
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  3. rs539994869[chr1:40265007]
Enhancers that have rs539994869[chr1:40265007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40262423 40268473 enh11765
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Thymus Stomach
chr1 40264988 40265120 vista1275
VISTA
Transcript factors that have rs539994869[chr1:40265007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40265002 40265014 ZBTB7A JASPAR yes 28291464
chr1 40265002 40265014 ZBTB7A JASPAR yes 118276143
chr1 40265003 40265018 RUNX2 JASPAR yes 28291465
chr1 40265003 40265018 RUNX2 JASPAR yes 118276144
chr1 40265006 40265026 ESR1 JASPAR yes 28291466
chr1 40265006 40265026 ESR1 JASPAR yes 118276145
Genes associated with rs539994869[chr1:40265007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More