EnhancerDB
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  3. vista1282[chr1:40442472-40442624]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1282[chr1:40442472-40442624]
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Tissue distribution of vista1282
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Transcription factor that possibly regulate vista1282[chr1:40442472-40442624]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40442492 40442505 ATF4 JASPAR yes 28303955
chr1 40442492 40442505 ATF4 JASPAR yes 118276440
chr1 40442506 40442512 NFE2 TRANSFAC yes 28303956
chr1 40442506 40442512 NFE2 TRANSFAC yes 118276441
chr1 40442521 40442537 NFYA JASPAR yes 28303957
chr1 40442521 40442537 NFYA JASPAR yes 118276442
chr1 40442524 40442539 NFYB JASPAR yes 28303958
chr1 40442524 40442539 NFYB JASPAR yes 118276443
chr1 40442556 40442565 PITX3 JASPAR yes 28303959
chr1 40442556 40442565 PITX3 JASPAR yes 118276444
chr1 40442557 40442565 OTX2 JASPAR yes 28303960
chr1 40442557 40442565 OTX2 JASPAR yes 118276445
chr1 40442557 40442575 NFYA JASPAR yes 28303961
chr1 40442557 40442575 NFYA JASPAR yes 118276446
chr1 40442560 40442579 PAX5 JASPAR yes 28303962
chr1 40442560 40442579 PAX5 JASPAR yes 118276447
chr1 40442570 40442578 FOXO3 JASPAR yes 28303963
chr1 40442570 40442578 FOXO3 JASPAR yes 118276448
chr1 40442574 40442590 SOX8 JASPAR yes 28303964
chr1 40442574 40442590 SOX8 JASPAR yes 118276449
chr1 40442576 40442580 YY1 TRANSFAC yes 28303965
chr1 40442576 40442580 YY1 TRANSFAC yes 118276450
chr1 40442584 40442599 FOXP1 JASPAR yes 28303966
chr1 40442584 40442599 FOXP1 JASPAR yes 118276451
chr1 40442585 40442598 POU2F2 JASPAR yes 28303967
chr1 40442585 40442598 POU2F2 JASPAR yes 118276452
chr1 40442586 40442598 POU3F1 JASPAR yes 28303968
chr1 40442586 40442598 POU3F2 JASPAR yes 28303969
chr1 40442586 40442598 POU3F1 JASPAR yes 118276453
chr1 40442586 40442598 POU3F2 JASPAR yes 118276454
chr1 40442587 40442599 POU2F1 JASPAR yes 28303970
chr1 40442587 40442599 POU2F1 JASPAR yes 118276455
chr1 40442588 40442597 POU5F1B JASPAR yes 28303971
chr1 40442588 40442597 POU5F1B JASPAR yes 118276456
chr1 40442589 40442597 FOXL1 JASPAR yes 28303972
chr1 40442589 40442597 FOXL1 JASPAR yes 118276457
chr1 40442590 40442601 NFIL3 JASPAR yes 28303973
chr1 40442590 40442601 NFIL3 JASPAR yes 118276458
chr1 40442598 40442603 SP1 TRANSFAC yes 28303974
chr1 40442598 40442603 SP1 TRANSFAC yes 118276459
chr1 40442598 40442607 HIC2 JASPAR yes 28303975
chr1 40442598 40442607 HIC2 JASPAR yes 118276460
chr1 40442601 40442605 LFA1 TRANSFAC yes 28303976
chr1 40442601 40442605 LFA1 TRANSFAC yes 118276461
SNP sites on vista1282[chr1:40442472-40442624]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40442550 rs538445185 A T no 252328
chr1 40442552 rs10889095 T A,C no 252329
chr1 40442585 rs201287923 CT C
FOXP1 POU2F2 SOX8
252330
Genes possibly regulated by vista1282[chr1:40442472-40442624]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40306723 40349183 - TRIT1 ENSG00000043514.11 40349183 0.61 0.99 554 6711
chr1 40361098 40367928 - MYCL ENSG00000116990.9 40367928 0.82 1.0 555 25456
chr1 40420802 40435638 + MFSD2A ENSG00000168389.13 40420802 0.96 1.0 556 78330
chr1 40505905 40538321 + CAP1 ENSG00000131236.12 40505905 0.84 0.99 557 36719
Expression level of Genes
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miRNAs possibly regulated by vista1282[chr1:40442472-40442624]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results