EnhancerDB
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  3. rs201287923[chr1:40442585]
Enhancers that have rs201287923[chr1:40442585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
chr1 40442472 40442624 vista1282
VISTA
Transcript factors that have rs201287923[chr1:40442585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40442196 40442686 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107802911
chr1 40442574 40442590 SOX8 JASPAR yes 28303964
chr1 40442574 40442590 SOX8 JASPAR yes 118276449
chr1 40442584 40442599 FOXP1 JASPAR yes 28303966
chr1 40442584 40442599 FOXP1 JASPAR yes 118276451
chr1 40442585 40442598 POU2F2 JASPAR yes 28303967
chr1 40442585 40442598 POU2F2 JASPAR yes 118276452
Genes associated with rs201287923[chr1:40442585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More