EnhancerDB
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  3. vista1293[chr1:40848967-40849502]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1293[chr1:40848967-40849502]
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Tissue distribution of vista1293
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Transcription factor that possibly regulate vista1293[chr1:40848967-40849502]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 40848589 40852477 POLR2A UCSC Txn Factor no Conserved 107802923
chr1 40848989 40849010 ZNF263 JASPAR yes 28326860
chr1 40848989 40849010 ZNF263 JASPAR yes 118277002
chr1 40849002 40849007 GATA2 JASPAR yes 28326861
chr1 40849002 40849007 GATA2 JASPAR yes 118277003
chr1 40849034 40849039 GATA2 JASPAR yes 28326862
chr1 40849034 40849039 GATA2 JASPAR yes 118277004
chr1 40849045 40849050 MYC TRANSFAC yes 28326863
chr1 40849045 40849050 MYC TRANSFAC yes 118277005
chr1 40849046 40849056 NFIA JASPAR yes 28326864
chr1 40849046 40849056 NFIA JASPAR yes 118277006
chr1 40849048 40849054 NFIC JASPAR yes 28326865
chr1 40849048 40849054 NFIC JASPAR yes 118277007
chr1 40849098 40849104 MAZ TRANSFAC yes 28326866
chr1 40849098 40849104 MAZ TRANSFAC yes 118277008
chr1 40849129 40849135 SOX10 JASPAR yes 28326867
chr1 40849129 40849135 SOX10 JASPAR yes 118277009
chr1 40849175 40849179 YY1 TRANSFAC yes 28326868
chr1 40849175 40849179 YY1 TRANSFAC yes 118277010
chr1 40849184 40849188 YY1 TRANSFAC yes 28326869
chr1 40849184 40849188 YY1 TRANSFAC yes 118277011
chr1 40849199 40849209 GABPA JASPAR yes 28326870
chr1 40849199 40849209 GABPA JASPAR yes 118277012
chr1 40849201 40849207 ETS1 JASPAR yes 28326871
chr1 40849201 40849207 SPI1 JASPAR yes 28326872
chr1 40849201 40849207 ETS1 JASPAR yes 118277013
chr1 40849201 40849207 SPI1 JASPAR yes 118277014
chr1 40849209 40849220 STAT3 JASPAR yes 28326873
chr1 40849209 40849220 STAT3 JASPAR yes 118277015
chr1 40849210 40849216 ETS1 JASPAR yes 28326874
chr1 40849210 40849216 ETS1 JASPAR yes 118277016
chr1 40849210 40849220 ELK1 JASPAR yes 28326875
chr1 40849210 40849220 ELK1 JASPAR yes 118277017
chr1 40849221 40849225 TEAD2 TRANSFAC yes 28326876
chr1 40849221 40849225 TEAD2 TRANSFAC yes 118277018
chr1 40849223 40849226 MYB TRANSFAC yes 28326877
chr1 40849223 40849226 MYB TRANSFAC yes 118277019
chr1 40849259 40849268 SRY JASPAR yes 28326878
chr1 40849259 40849268 SRY JASPAR yes 118277020
chr1 40849263 40849275 MEF2B JASPAR yes 28326879
chr1 40849263 40849275 MEF2B JASPAR yes 118277021
chr1 40849273 40849286 ELF1 JASPAR yes 28326880
chr1 40849273 40849286 ELF1 JASPAR yes 118277022
chr1 40849274 40849286 EHF JASPAR yes 28326881
chr1 40849274 40849286 ELF1 JASPAR yes 28326882
chr1 40849274 40849286 ELF4 JASPAR yes 28326883
chr1 40849274 40849286 EHF JASPAR yes 118277023
chr1 40849274 40849286 ELF1 JASPAR yes 118277024
chr1 40849274 40849286 ELF4 JASPAR yes 118277025
chr1 40849274 40849287 ELF3 JASPAR yes 28326884
chr1 40849274 40849287 ELF3 JASPAR yes 118277026
chr1 40849275 40849286 ELF5 JASPAR yes 28326885
chr1 40849275 40849286 ELF5 JASPAR yes 118277027
chr1 40849276 40849283 ETS1 TRANSFAC yes 28326886
chr1 40849276 40849283 ETS1 TRANSFAC yes 118277028
chr1 40849276 40849286 ETV6 JASPAR yes 28326887
chr1 40849276 40849286 ETV6 JASPAR yes 118277029
chr1 40849276 40849287 ELK4 JASPAR yes 28326888
chr1 40849276 40849287 FLI1 JASPAR yes 28326889
chr1 40849276 40849287 ELK4 JASPAR yes 118277030
chr1 40849276 40849287 FLI1 JASPAR yes 118277031
chr1 40849277 40849285 EHF JASPAR yes 28326890
chr1 40849277 40849285 FEV JASPAR yes 28326891
chr1 40849277 40849285 EHF JASPAR yes 118277032
chr1 40849277 40849285 FEV JASPAR yes 118277033
chr1 40849278 40849285 SPI1 JASPAR yes 28326892
chr1 40849278 40849285 SPI1 JASPAR yes 118277034
chr1 40849282 40849294 TEF JASPAR yes 28326893
chr1 40849282 40849294 TEF JASPAR yes 118277035
chr1 40849285 40849296 DMRT3 JASPAR yes 28326894
chr1 40849285 40849296 DMRT3 JASPAR yes 118277036
chr1 40849289 40849292 MYB TRANSFAC yes 28326895
chr1 40849289 40849292 MYB TRANSFAC yes 118277037
chr1 40849307 40849318 FOXB1 JASPAR yes 28326896
chr1 40849307 40849318 FOXB1 JASPAR yes 118277038
chr1 40849311 40849318 NKX3-1 JASPAR yes 28326897
chr1 40849311 40849318 NKX3-1 JASPAR yes 118277039
chr1 40849324 40849335 NFE2L2 JASPAR yes 28326898
chr1 40849324 40849335 NFE2L2 JASPAR yes 118277040
chr1 40849334 40849350 E2F2 JASPAR yes 28326899
chr1 40849334 40849350 E2F2 JASPAR yes 118277041
chr1 40849348 40849353 MYB TRANSFAC yes 28326900
chr1 40849348 40849353 MYB TRANSFAC yes 118277042
chr1 40849354 40849362 FOXL1 JASPAR yes 28326901
chr1 40849354 40849362 FOXL1 JASPAR yes 118277043
chr1 40849358 40849362 YY1 TRANSFAC yes 28326902
chr1 40849358 40849362 YY1 TRANSFAC yes 118277044
chr1 40849369 40849381 PKNOX2 JASPAR yes 28326903
chr1 40849369 40849381 PKNOX2 JASPAR yes 118277045
chr1 40849423 40849431 MEIS2 JASPAR yes 28326904
chr1 40849423 40849431 MEIS3 JASPAR yes 28326905
chr1 40849423 40849431 MEIS2 JASPAR yes 118277046
chr1 40849423 40849431 MEIS3 JASPAR yes 118277047
chr1 40849424 40849428 NFE TRANSFAC yes 28326906
chr1 40849424 40849428 NFE TRANSFAC yes 118277048
chr1 40849424 40849431 MEIS1 JASPAR yes 28326907
chr1 40849424 40849431 MEIS1 JASPAR yes 118277049
chr1 40849428 40849443 STAT1 JASPAR yes 28326908
chr1 40849428 40849443 STAT1 JASPAR yes 118277050
chr1 40849430 40849441 STAT1 JASPAR yes 28326909
chr1 40849430 40849441 STAT3 JASPAR yes 28326910
chr1 40849430 40849441 STAT1 JASPAR yes 118277051
chr1 40849430 40849441 STAT3 JASPAR yes 118277052
chr1 40849431 40849439 STAT6 TRANSFAC yes 28326911
chr1 40849431 40849439 STAT6 TRANSFAC yes 118277053
chr1 40849435 40849440 ETS2 TRANSFAC yes 28326912
chr1 40849435 40849440 ETS2 TRANSFAC yes 118277054
chr1 40849455 40849460 GATA2 JASPAR yes 28326913
chr1 40849455 40849460 GATA2 JASPAR yes 118277055
chr1 40849456 40849462 ZNF354C JASPAR yes 28326914
chr1 40849456 40849462 ZNF354C JASPAR yes 118277056
SNP sites on vista1293[chr1:40848967-40849502]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 40848980 rs58298492 G A
POLR2A
254776
chr1 40848991 rs150496189 G GCTC
POLR2A ZNF263
254777
chr1 40849203 rs78492778 G A,T
ETS1 GABPA POLR2A SPI1
254778
chr1 40849208 rs143816666 G A
GABPA POLR2A
254779
chr1 40849232 rs148177701 C T
POLR2A
254780
chr1 40849321 rs143948827 G A
POLR2A
254781
Genes possibly regulated by vista1293[chr1:40848967-40849502]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 40766159 40783488 - COL9A2 ENSG00000049089.9 40783488 0.83 1.0 562 34521
chr1 40810522 40888998 + SMAP2 ENSG00000084070.7 40810522 0.91 0.99 563 61555
chr1 40915774 40929390 + ZFP69B ENSG00000187801.10 40915774 0.73 0.82 564 33728
chr1 40942887 40962015 + ZFP69 ENSG00000187815.5 40942887 0.69 0.86 565 6615
Expression level of Genes
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miRNAs possibly regulated by vista1293[chr1:40848967-40849502]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results