EnhancerDB
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  3. rs78492778[chr1:40849203]
Enhancers that have rs78492778[chr1:40849203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40843025 40858135 enh273
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Blood (T-cell) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr1 40848967 40849502 vista1293
VISTA
Transcript factors that have rs78492778[chr1:40849203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40848589 40852477 POLR2A UCSC Txn Factor no Conserved 107802923
chr1 40849199 40849209 GABPA JASPAR yes 28326870
chr1 40849199 40849209 GABPA JASPAR yes 118277012
chr1 40849201 40849207 ETS1 JASPAR yes 28326871
chr1 40849201 40849207 SPI1 JASPAR yes 28326872
chr1 40849201 40849207 ETS1 JASPAR yes 118277013
chr1 40849201 40849207 SPI1 JASPAR yes 118277014
Genes associated with rs78492778[chr1:40849203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More