EnhancerDB
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  3. vista13[chr1:993498-993878]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13[chr1:993498-993878]
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Tissue distribution of vista13
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Transcription factor that possibly regulate vista13[chr1:993498-993878]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 993487 993502 RUNX2 JASPAR yes 26177368
chr1 993487 993502 RUNX2 JASPAR yes 118213649
chr1 993512 993516 H4TF2 TRANSFAC yes 26177369
chr1 993512 993516 H4TF2 TRANSFAC yes 118213650
chr1 993525 993540 FOXA1 JASPAR yes 26177370
chr1 993525 993540 FOXA1 JASPAR yes 118213651
chr1 993527 993539 FOXC2 JASPAR yes 26177371
chr1 993527 993539 FOXC2 JASPAR yes 118213652
chr1 993529 993540 FOXA1 JASPAR yes 26177372
chr1 993529 993540 FOXA1 JASPAR yes 118213653
chr1 993540 993557 RARA JASPAR yes 26177373
chr1 993540 993557 RXRA JASPAR yes 26177374
chr1 993540 993557 RARA JASPAR yes 118213654
chr1 993540 993557 RXRA JASPAR yes 118213655
chr1 993544 993565 ZNF263 JASPAR yes 26177375
chr1 993544 993565 ZNF263 JASPAR yes 118213656
chr1 993550 993560 FIGLA JASPAR yes 26177376
chr1 993550 993560 FIGLA JASPAR yes 118213657
chr1 993552 993557 USF2 TRANSFAC yes 26177377
chr1 993552 993557 USF2 TRANSFAC yes 118213658
chr1 993557 993561 H4TF2 TRANSFAC yes 26177378
chr1 993557 993561 H4TF2 TRANSFAC yes 118213659
chr1 993557 993571 EBF1 JASPAR yes 26177379
chr1 993557 993571 EBF1 JASPAR yes 118213660
chr1 993560 993571 EBF1 JASPAR yes 26177380
chr1 993560 993571 EBF1 JASPAR yes 118213661
chr1 993564 993569 TFAP2A TRANSFAC yes 26177381
chr1 993564 993569 TFAP2A TRANSFAC yes 118213662
chr1 993564 993570 MZF1 JASPAR yes 26177382
chr1 993564 993570 MZF1 JASPAR yes 118213663
chr1 993566 993584 MAFF JASPAR yes 26177383
chr1 993566 993584 MAFF JASPAR yes 118213664
chr1 993567 993572 GATA2 JASPAR yes 26177384
chr1 993567 993572 GATA2 JASPAR yes 118213665
chr1 993568 993579 NRL JASPAR yes 26177385
chr1 993568 993579 NRL JASPAR yes 118213666
chr1 993568 993583 MAFK JASPAR yes 26177386
chr1 993568 993583 MAFK JASPAR yes 118213667
chr1 993593 993605 HES7 JASPAR yes 26177387
chr1 993593 993605 PKNOX1 JASPAR yes 26177388
chr1 993593 993605 PKNOX2 JASPAR yes 26177389
chr1 993593 993605 TGIF1 JASPAR yes 26177390
chr1 993593 993605 TGIF2 JASPAR yes 26177391
chr1 993593 993605 HES7 JASPAR yes 118213668
chr1 993593 993605 PKNOX1 JASPAR yes 118213669
chr1 993593 993605 PKNOX2 JASPAR yes 118213670
chr1 993593 993605 TGIF1 JASPAR yes 118213671
chr1 993593 993605 TGIF2 JASPAR yes 118213672
chr1 993594 993603 SNAI2 JASPAR yes 26177392
chr1 993594 993603 SNAI2 JASPAR yes 118213673
chr1 993594 993604 HEY2 JASPAR yes 26177393
chr1 993594 993604 ID4 JASPAR yes 26177394
chr1 993594 993604 TCF3 JASPAR yes 26177395
chr1 993594 993604 TCF4 JASPAR yes 26177396
chr1 993594 993604 HEY2 JASPAR yes 118213674
chr1 993594 993604 ID4 JASPAR yes 118213675
chr1 993594 993604 TCF3 JASPAR yes 118213676
chr1 993594 993604 TCF4 JASPAR yes 118213677
chr1 993597 993605 TBX15 JASPAR yes 26177397
chr1 993597 993605 TBX1 JASPAR yes 26177398
chr1 993597 993605 TBX4 JASPAR yes 26177399
chr1 993597 993605 TBX5 JASPAR yes 26177400
chr1 993597 993605 TBX15 JASPAR yes 118213678
chr1 993597 993605 TBX1 JASPAR yes 118213679
chr1 993597 993605 TBX4 JASPAR yes 118213680
chr1 993597 993605 TBX5 JASPAR yes 118213681
chr1 993597 993610 SMAD2 JASPAR yes 26177401
chr1 993597 993610 SMAD2 JASPAR yes 118213682
chr1 993611 993632 ZNF263 JASPAR yes 26177402
chr1 993611 993632 ZNF263 JASPAR yes 118213683
chr1 993620 993641 ZNF263 JASPAR yes 26177403
chr1 993620 993641 ZNF263 JASPAR yes 118213684
chr1 993660 993675 ZIC3 JASPAR yes 26177404
chr1 993660 993675 ZIC4 JASPAR yes 26177405
chr1 993660 993675 ZIC3 JASPAR yes 118213685
chr1 993660 993675 ZIC4 JASPAR yes 118213686
chr1 993661 993675 GLIS2 JASPAR yes 26177406
chr1 993661 993675 GLIS3 JASPAR yes 26177407
chr1 993661 993675 ZIC1 JASPAR yes 26177408
chr1 993661 993675 GLIS2 JASPAR yes 118213687
chr1 993661 993675 GLIS3 JASPAR yes 118213688
chr1 993661 993675 ZIC1 JASPAR yes 118213689
chr1 993664 993669 SP1 TRANSFAC yes 26177409
chr1 993664 993669 SP1 TRANSFAC yes 118213690
chr1 993667 993681 PLAG1 JASPAR yes 26177410
chr1 993667 993681 PLAG1 JASPAR yes 118213691
chr1 993668 993682 PLAG1 JASPAR yes 26177411
chr1 993668 993682 PLAG1 JASPAR yes 118213692
chr1 993669 993674 SP1 TRANSFAC yes 26177412
chr1 993669 993674 SP1 TRANSFAC yes 118213693
chr1 993670 993687 RARA JASPAR yes 26177413
chr1 993670 993687 RARA JASPAR yes 118213694
chr1 993677 993682 SP1 TRANSFAC yes 26177414
chr1 993677 993682 SP1 TRANSFAC yes 118213695
chr1 993681 993696 ESR2 JASPAR yes 26177415
chr1 993681 993696 ESR2 JASPAR yes 118213696
chr1 993681 993701 ESR1 JASPAR yes 26177416
chr1 993681 993701 ESR1 JASPAR yes 118213697
chr1 993682 993686 LFA1 TRANSFAC yes 26177417
chr1 993682 993686 LFA1 TRANSFAC yes 118213698
chr1 993687 993705 IRF2 JASPAR yes 26177418
chr1 993687 993705 IRF2 JASPAR yes 118213699
chr1 993690 993693 MYB TRANSFAC yes 26177419
chr1 993690 993693 MYB TRANSFAC yes 118213700
chr1 993692 993704 IRF1 JASPAR yes 26177420
chr1 993692 993704 IRF1 JASPAR yes 118213701
chr1 993692 993706 IRF7 JASPAR yes 26177421
chr1 993692 993706 IRF7 JASPAR yes 118213702
chr1 993697 993712 STAT1 JASPAR yes 26177422
chr1 993697 993712 STAT1 JASPAR yes 118213703
chr1 993699 993710 STAT3 JASPAR yes 26177423
chr1 993699 993710 STAT3 JASPAR yes 118213704
chr1 993700 993715 HSF1 JASPAR yes 26177424
chr1 993700 993715 HSF1 JASPAR yes 118213705
chr1 993705 993720 HSF1 JASPAR yes 26177425
chr1 993705 993720 HSF1 JASPAR yes 118213706
chr1 993710 993714 H4TF2 TRANSFAC yes 26177426
chr1 993710 993714 H4TF2 TRANSFAC yes 118213707
chr1 993714 993725 FOXA1 JASPAR yes 26177427
chr1 993714 993725 FOXA1 JASPAR yes 118213708
chr1 993716 993727 FOXP2 JASPAR yes 26177428
chr1 993716 993727 FOXP2 JASPAR yes 118213709
chr1 993724 993729 SP1 TRANSFAC yes 26177429
chr1 993724 993729 SP1 TRANSFAC yes 118213710
chr1 993742 993763 ZNF263 JASPAR yes 26177430
chr1 993742 993763 ZNF263 JASPAR yes 118213711
chr1 993749 993764 ZIC3 JASPAR yes 26177431
chr1 993749 993764 ZIC3 JASPAR yes 118213712
chr1 993754 993764 SP1 JASPAR yes 26177432
chr1 993754 993764 SP1 JASPAR yes 118213713
chr1 993754 993775 ZNF263 JASPAR yes 26177433
chr1 993754 993775 ZNF263 JASPAR yes 118213714
chr1 993756 993762 MAZ TRANSFAC yes 26177434
chr1 993756 993762 MAZ TRANSFAC yes 118213715
chr1 993760 993764 LFA1 TRANSFAC yes 26177435
chr1 993760 993764 LFA1 TRANSFAC yes 118213716
chr1 993763 993772 ZEB1 JASPAR yes 26177436
chr1 993763 993772 ZEB1 JASPAR yes 118213717
chr1 993777 993787 SP1 JASPAR yes 26177437
chr1 993777 993787 SP1 JASPAR yes 118213718
chr1 993779 993784 SP1 TRANSFAC yes 26177438
chr1 993779 993784 SP1 TRANSFAC yes 118213719
chr1 993780 993785 SP1 TRANSFAC yes 26177439
chr1 993780 993785 SP1 TRANSFAC yes 118213720
chr1 993780 993786 SP1 TRANSFAC yes 26177440
chr1 993780 993786 SP1 TRANSFAC yes 118213721
chr1 993781 993801 RREB1 JASPAR yes 26177441
chr1 993781 993801 RREB1 JASPAR yes 118213722
chr1 993783 993798 RUNX2 JASPAR yes 26177442
chr1 993783 993798 RUNX2 JASPAR yes 118213723
chr1 993784 993788 LFA1 TRANSFAC yes 26177443
chr1 993784 993788 LFA1 TRANSFAC yes 118213724
chr1 993785 993795 TFEB JASPAR yes 26177444
chr1 993785 993795 TFEB JASPAR yes 118213725
chr1 993798 993802 H4TF2 TRANSFAC yes 26177445
chr1 993798 993802 H4TF2 TRANSFAC yes 118213726
chr1 993818 993833 RUNX2 JASPAR yes 26177446
chr1 993818 993833 RUNX2 JASPAR yes 118213727
chr1 993833 993839 SOX10 JASPAR yes 26177447
chr1 993833 993839 SOX10 JASPAR yes 118213728
chr1 993846 993859 ELF1 JASPAR yes 26177448
chr1 993846 993859 ELF1 JASPAR yes 118213729
chr1 993848 993859 ELF5 JASPAR yes 26177449
chr1 993848 993859 ELF5 JASPAR yes 118213730
chr1 993849 993860 ELK4 JASPAR yes 26177450
chr1 993849 993860 FLI1 JASPAR yes 26177451
chr1 993849 993860 ELK4 JASPAR yes 118213731
chr1 993849 993860 FLI1 JASPAR yes 118213732
chr1 993869 993884 HNF4G JASPAR yes 26177452
chr1 993869 993884 HNF4G JASPAR yes 118213733
chr1 993870 993885 HNF4A JASPAR yes 26177453
chr1 993870 993885 HNF4A JASPAR yes 118213734
SNP sites on vista13[chr1:993498-993878]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 993501 rs184854562 C G
RUNX2
2397
chr1 993552 rs551088900 T C
FIGLA RARA RXRA USF2 ZNF263
2398
chr1 993581 rs72900475 G A
MAFF MAFK
2399
chr1 993776 rs577208716 C T no 2400
chr1 993798 rs181598931 G A
H4TF2 RREB1 RUNX2
2401
chr1 993859 rs72900480 G A
ELF1 ELF5 ELK4 FLI1
2402
Genes possibly regulated by vista13[chr1:993498-993878]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 879584 894689 - NOC2L ENSG00000188976.6 894689 0.69 1.0 7 1191
chr1 895967 901095 + KLHL17 ENSG00000187961.9 895967 0.67 1.0 8 2469
chr1 901877 911245 + PLEKHN1 ENSG00000187583.6 901877 0.96 1.0 9 8379
chr1 910579 917497 - C1orf170 ENSG00000187642.5 917497 0.99 1.0 10 23999
chr1 934342 935552 - HES4 ENSG00000188290.6 935552 0.71 1.0 11 42054
chr1 948803 949920 + ISG15 ENSG00000187608.5 948803 0.81 1.0 12 55305
chr1 955503 991496 + AGRN ENSG00000188157.9 955503 0.91 1.0 13 62005
chr1 1006346 1009687 - RNF223 ENSG00000237330.2 1009687 0.97 1.0 14 84191
chr1 1017198 1051741 - C1orf159 ENSG00000131591.13 1051741 0.65 1.0 15 42137
Expression level of Genes
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miRNAs possibly regulated by vista13[chr1:993498-993878]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results