EnhancerDB
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  3. rs551088900[chr1:993552]
Enhancers that have rs551088900[chr1:993552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 992241 1006235 enh11407
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Pancreas Thymus
chr1 993498 993878 vista13
VISTA
Transcript factors that have rs551088900[chr1:993552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 993540 993557 RARA JASPAR yes 26177373
chr1 993540 993557 RXRA JASPAR yes 26177374
chr1 993540 993557 RARA JASPAR yes 118213654
chr1 993540 993557 RXRA JASPAR yes 118213655
chr1 993544 993565 ZNF263 JASPAR yes 26177375
chr1 993544 993565 ZNF263 JASPAR yes 118213656
chr1 993550 993560 FIGLA JASPAR yes 26177376
chr1 993550 993560 FIGLA JASPAR yes 118213657
chr1 993552 993557 USF2 TRANSFAC yes 26177377
chr1 993552 993557 USF2 TRANSFAC yes 118213658
Genes associated with rs551088900[chr1:993552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More