EnhancerDB
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  3. vista1305[chr1:41164800-41165075]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1305[chr1:41164800-41165075]
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Tissue distribution of vista1305
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Transcription factor that possibly regulate vista1305[chr1:41164800-41165075]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41164783 41164801 E2F3 JASPAR yes 28335955
chr1 41164783 41164801 E2F3 JASPAR yes 118277570
chr1 41164784 41164800 E2F2 JASPAR yes 28335956
chr1 41164784 41164800 E2F2 JASPAR yes 118277571
chr1 41164821 41164836 ESR2 JASPAR yes 28335957
chr1 41164821 41164836 ESR2 JASPAR yes 118277572
chr1 41164829 41164833 NFE TRANSFAC yes 28335958
chr1 41164829 41164833 NFE TRANSFAC yes 118277573
chr1 41164836 41164851 FOXP1 JASPAR yes 28335959
chr1 41164836 41164851 FOXP1 JASPAR yes 118277574
chr1 41164836 41164857 IRF1 JASPAR yes 28335960
chr1 41164836 41164857 IRF1 JASPAR yes 118277575
chr1 41164838 41164850 FOXC2 JASPAR yes 28335961
chr1 41164838 41164850 FOXC2 JASPAR yes 118277576
chr1 41164838 41164858 RREB1 JASPAR yes 28335962
chr1 41164838 41164858 RREB1 JASPAR yes 118277577
chr1 41164839 41164850 FOXP2 JASPAR yes 28335963
chr1 41164839 41164850 FOXP2 JASPAR yes 118277578
chr1 41164840 41164855 STAT2 JASPAR yes 28335964
chr1 41164840 41164855 STAT2 JASPAR yes 118277579
chr1 41164841 41164853 IRF1 JASPAR yes 28335965
chr1 41164841 41164853 IRF1 JASPAR yes 118277580
chr1 41164841 41164856 FOXP1 JASPAR yes 28335966
chr1 41164841 41164856 FOXP1 JASPAR yes 118277581
chr1 41164841 41164862 IRF1 JASPAR yes 28335967
chr1 41164841 41164862 IRF1 JASPAR yes 118277582
chr1 41164843 41164863 RREB1 JASPAR yes 28335968
chr1 41164843 41164863 RREB1 JASPAR yes 118277583
chr1 41164845 41164860 STAT2 JASPAR yes 28335969
chr1 41164845 41164860 STAT2 JASPAR yes 118277584
chr1 41164846 41164858 IRF1 JASPAR yes 28335970
chr1 41164846 41164858 IRF1 JASPAR yes 118277585
chr1 41164847 41164868 IRF1 JASPAR yes 28335971
chr1 41164847 41164868 IRF1 JASPAR yes 118277586
chr1 41164849 41164864 IRF9 JASPAR yes 28335972
chr1 41164849 41164864 IRF9 JASPAR yes 118277587
chr1 41164850 41164864 IRF7 JASPAR yes 28335973
chr1 41164850 41164864 IRF7 JASPAR yes 118277588
chr1 41164851 41164869 SRF JASPAR yes 28335974
chr1 41164851 41164869 SRF JASPAR yes 118277589
chr1 41164862 41164867 ETS2 TRANSFAC yes 28335975
chr1 41164862 41164867 ETS2 TRANSFAC yes 118277590
chr1 41164867 41164881 JUN JASPAR yes 28335976
chr1 41164867 41164881 JUN JASPAR yes 118277591
chr1 41164869 41164880 BATF JASPAR yes 28335977
chr1 41164869 41164880 BATF JASPAR yes 118277592
chr1 41164870 41164881 FOSL2 JASPAR yes 28335978
chr1 41164870 41164881 JUNB JASPAR yes 28335979
chr1 41164870 41164881 FOSL2 JASPAR yes 118277593
chr1 41164870 41164881 JUNB JASPAR yes 118277594
chr1 41164871 41164880 NFE2 TRANSFAC yes 28335980
chr1 41164871 41164880 NFE2 TRANSFAC yes 118277595
chr1 41164871 41164882 FOS JASPAR yes 28335981
chr1 41164871 41164882 FOSL1 JASPAR yes 28335982
chr1 41164871 41164882 JUND JASPAR yes 28335983
chr1 41164871 41164882 NFE2 JASPAR yes 28335984
chr1 41164871 41164882 FOS JASPAR yes 118277596
chr1 41164871 41164882 FOSL1 JASPAR yes 118277597
chr1 41164871 41164882 JUND JASPAR yes 118277598
chr1 41164871 41164882 NFE2 JASPAR yes 118277599
chr1 41164872 41164881 JDP2 JASPAR yes 28335985
chr1 41164872 41164881 JDP2 JASPAR yes 118277600
chr1 41164872 41164883 FOSL2 JASPAR yes 28335986
chr1 41164872 41164883 JUNB JASPAR yes 28335987
chr1 41164872 41164883 FOSL2 JASPAR yes 118277601
chr1 41164872 41164883 JUNB JASPAR yes 118277602
chr1 41164872 41164886 JUN JASPAR yes 28335988
chr1 41164872 41164886 JUN JASPAR yes 118277603
chr1 41164880 41164888 FEV JASPAR yes 28335989
chr1 41164880 41164888 FEV JASPAR yes 118277604
chr1 41164905 41164909 YY1 TRANSFAC yes 28335990
chr1 41164905 41164909 YY1 TRANSFAC yes 118277605
chr1 41164908 41164919 DMRT3 JASPAR yes 28335991
chr1 41164908 41164919 DMRT3 JASPAR yes 118277606
chr1 41164915 41164931 NFYA JASPAR yes 28335992
chr1 41164915 41164931 NFYA JASPAR yes 118277607
chr1 41164918 41164933 NFYB JASPAR yes 28335993
chr1 41164918 41164933 NFYB JASPAR yes 118277608
chr1 41164962 41164970 HOXA5 JASPAR yes 28335994
chr1 41164962 41164970 HOXA5 JASPAR yes 118277609
chr1 41164969 41164980 ESRRA JASPAR yes 28335995
chr1 41164969 41164980 ESRRA JASPAR yes 118277610
chr1 41164975 41164982 E2F1 TRANSFAC yes 28335996
chr1 41164975 41164982 E2F1 TRANSFAC yes 118277611
chr1 41164996 41165000 NFE TRANSFAC yes 28335997
chr1 41164996 41165000 NFE TRANSFAC yes 118277612
chr1 41165049 41165054 GATA2 JASPAR yes 28335998
chr1 41165049 41165054 GATA2 JASPAR yes 118277613
chr1 41165075 41165080 ETS2 TRANSFAC yes 28335999
chr1 41165075 41165080 ETS2 TRANSFAC yes 118277614
SNP sites on vista1305[chr1:41164800-41165075]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41164817 rs536237277 C A,T no 255902
chr1 41164832 rs12121412 G A
ESR2 NFE
255903
chr1 41164842 rs59791875 AAAAAC A
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
255904
chr1 41164842 rs796595450 AAAAAC A
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
255905
chr1 41164880 rs553367779 A C
BATF FEV FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
255906
chr1 41164954 rs180689050 A G no 255907
chr1 41165012 rs185115098 T C no 255908
chr1 41165042 rs148089199 A G no 255909
Genes possibly regulated by vista1305[chr1:41164800-41165075]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41086351 41131329 - RIMS3 ENSG00000117016.5 41131329 0.77 0.99 568 66529
chr1 41157320 41237275 + NFYC ENSG00000066136.15 41157320 0.72 1.0 569 92520
chr1 41249684 41306124 + KCNQ4 ENSG00000117013.10 41249684 0.88 1.0 570 15391
Expression level of Genes
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miRNAs possibly regulated by vista1305[chr1:41164800-41165075]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results