EnhancerDB
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  3. rs796595450[chr1:41164842]
Enhancers that have rs796595450[chr1:41164842]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41162745 41176935 enh274
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
chr1 41164800 41165075 vista1305
VISTA
Transcript factors that have rs796595450[chr1:41164842]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41164586 41165182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21325350
chr1 41164586 41165182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802932
chr1 41164836 41164851 FOXP1 JASPAR yes 28335959
chr1 41164836 41164851 FOXP1 JASPAR yes 118277574
chr1 41164836 41164857 IRF1 JASPAR yes 28335960
chr1 41164836 41164857 IRF1 JASPAR yes 118277575
chr1 41164838 41164850 FOXC2 JASPAR yes 28335961
chr1 41164838 41164850 FOXC2 JASPAR yes 118277576
chr1 41164838 41164858 RREB1 JASPAR yes 28335962
chr1 41164838 41164858 RREB1 JASPAR yes 118277577
chr1 41164839 41164850 FOXP2 JASPAR yes 28335963
chr1 41164839 41164850 FOXP2 JASPAR yes 118277578
chr1 41164840 41164855 STAT2 JASPAR yes 28335964
chr1 41164840 41164855 STAT2 JASPAR yes 118277579
chr1 41164841 41164853 IRF1 JASPAR yes 28335965
chr1 41164841 41164853 IRF1 JASPAR yes 118277580
chr1 41164841 41164856 FOXP1 JASPAR yes 28335966
chr1 41164841 41164856 FOXP1 JASPAR yes 118277581
chr1 41164841 41164862 IRF1 JASPAR yes 28335967
chr1 41164841 41164862 IRF1 JASPAR yes 118277582
Genes associated with rs796595450[chr1:41164842], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More