EnhancerDB
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  3. vista1321[chr1:41828934-41829164]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1321[chr1:41828934-41829164]
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Tissue distribution of vista1321
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Transcription factor that possibly regulate vista1321[chr1:41828934-41829164]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41828936 41828948 TFAP2A JASPAR yes 28380909
chr1 41828936 41828948 TFAP2B JASPAR yes 28380910
chr1 41828936 41828948 TFAP2C JASPAR yes 28380911
chr1 41828936 41828948 TFAP2A JASPAR yes 118278305
chr1 41828936 41828948 TFAP2B JASPAR yes 118278306
chr1 41828936 41828948 TFAP2C JASPAR yes 118278307
chr1 41828936 41828949 TFAP2A JASPAR yes 28380912
chr1 41828936 41828949 TFAP2B JASPAR yes 28380913
chr1 41828936 41828949 TFAP2C JASPAR yes 28380914
chr1 41828936 41828949 TFAP2A JASPAR yes 118278308
chr1 41828936 41828949 TFAP2B JASPAR yes 118278309
chr1 41828936 41828949 TFAP2C JASPAR yes 118278310
chr1 41828943 41828964 ZNF263 JASPAR yes 28380915
chr1 41828943 41828964 ZNF263 JASPAR yes 118278311
chr1 41828963 41828969 SP1 TRANSFAC yes 28380916
chr1 41828963 41828969 SP1 TRANSFAC yes 118278312
chr1 41828968 41828983 RFX5 JASPAR yes 28380917
chr1 41828968 41828983 RFX5 JASPAR yes 118278313
chr1 41828987 41828991 NFE TRANSFAC yes 28380918
chr1 41828987 41828991 NFE TRANSFAC yes 118278314
chr1 41829043 41829049 MAZ TRANSFAC yes 28380919
chr1 41829043 41829049 MAZ TRANSFAC yes 118278315
chr1 41829076 41829082 ESR1 TRANSFAC yes 28380920
chr1 41829076 41829082 ESR1 TRANSFAC yes 118278316
chr1 41829077 41829094 RXRA JASPAR yes 28380921
chr1 41829077 41829094 RXRA JASPAR yes 118278317
chr1 41829078 41829082 ESR1 TRANSFAC yes 28380922
chr1 41829078 41829082 ESR1 TRANSFAC yes 118278318
chr1 41829082 41829089 SPIB JASPAR yes 28380923
chr1 41829082 41829089 SPIB JASPAR yes 118278319
chr1 41829082 41829093 FLI1 JASPAR yes 28380924
chr1 41829082 41829093 FLI1 JASPAR yes 118278320
chr1 41829083 41829091 EHF JASPAR yes 28380925
chr1 41829083 41829091 EHF JASPAR yes 118278321
chr1 41829103 41829113 SP1 JASPAR yes 28380926
chr1 41829103 41829113 SP1 JASPAR yes 118278322
chr1 41829103 41829124 ZNF263 JASPAR yes 28380927
chr1 41829103 41829124 ZNF263 JASPAR yes 118278323
chr1 41829104 41829111 CEBPA TRANSFAC yes 28380928
chr1 41829104 41829111 CEBPA TRANSFAC yes 118278324
chr1 41829106 41829116 MZF1 JASPAR yes 28380929
chr1 41829106 41829116 MZF1 JASPAR yes 118278325
chr1 41829118 41829127 HIC2 JASPAR yes 28380930
chr1 41829118 41829127 HIC2 JASPAR yes 118278326
chr1 41829121 41829125 LFA1 TRANSFAC yes 28380931
chr1 41829121 41829125 LFA1 TRANSFAC yes 118278327
chr1 41829128 41829138 MSC JASPAR yes 28380932
chr1 41829128 41829138 MSC JASPAR yes 118278328
chr1 41829140 41829152 TFAP2B JASPAR yes 28380933
chr1 41829140 41829152 TFAP2C JASPAR yes 28380934
chr1 41829140 41829152 TFAP2B JASPAR yes 118278329
chr1 41829140 41829152 TFAP2C JASPAR yes 118278330
chr1 41829147 41829151 LFA1 TRANSFAC yes 28380935
chr1 41829147 41829151 LFA1 TRANSFAC yes 118278331
chr1 41829158 41829176 ESR2 JASPAR yes 28380936
chr1 41829158 41829176 ESR2 JASPAR yes 118278332
chr1 41829160 41829180 ESR1 JASPAR yes 28380937
chr1 41829160 41829180 ESR1 JASPAR yes 118278333
chr1 41829164 41829181 ESR1 JASPAR yes 28380938
chr1 41829164 41829181 ESR1 JASPAR yes 118278334
chr1 41829164 41829182 ESR1 JASPAR yes 28380939
chr1 41829164 41829182 ESR2 JASPAR yes 28380940
chr1 41829164 41829182 ESR1 JASPAR yes 118278335
chr1 41829164 41829182 ESR2 JASPAR yes 118278336
SNP sites on vista1321[chr1:41828934-41829164]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41828943 rs142619960 T C
TFAP2A TFAP2B TFAP2C ZNF263
260705
chr1 41828984 rs140953129 C T no 260706
chr1 41828985 rs114666175 G A no 260707
Genes possibly regulated by vista1321[chr1:41828934-41829164]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41827594 41849262 + FOXO6 ENSG00000204060.4 41827594 0.84 1.0 575 98660
Expression level of Genes
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miRNAs possibly regulated by vista1321[chr1:41828934-41829164]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results