EnhancerDB
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  3. vista13242[chr12:46949913-46950236]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13242[chr12:46949913-46950236]
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Tissue distribution of vista13242
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Transcription factor that possibly regulate vista13242[chr12:46949913-46950236]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 46949843 46950383 EP300 UCSC Txn Factor no Conserved 108027934
chr12 46949980 46950238 CEBPB UCSC Txn Factor no Conserved 108027975
chr12 46949994 46950284 JUN UCSC Txn Factor no Conserved 108027980
chr12 46950003 46950348 STAT3 UCSC Txn Factor no Conserved 108027984
chr12 46950004 46950293 JUND UCSC Txn Factor no Conserved 108027986
chr12 46949907 46949921 RORA JASPAR yes 82395935
chr12 46949907 46949921 RORA JASPAR yes 120637496
chr12 46949918 46949921 MYB TRANSFAC yes 82395936
chr12 46949918 46949921 MYB TRANSFAC yes 120637497
chr12 46949919 46949929 MYF6 JASPAR yes 82395937
chr12 46949919 46949929 MYF6 JASPAR yes 120637498
chr12 46949924 46949938 PAX6 JASPAR yes 82395938
chr12 46949924 46949938 PAX6 JASPAR yes 120637499
chr12 46949951 46949957 MYC TRANSFAC yes 82395939
chr12 46949951 46949957 MYC TRANSFAC yes 120637500
chr12 46949962 46949966 YY1 TRANSFAC yes 82395940
chr12 46949962 46949966 YY1 TRANSFAC yes 120637501
chr12 46949974 46949989 MEF2A JASPAR yes 82395941
chr12 46949974 46949989 MEF2A JASPAR yes 120637502
chr12 46949974 46949992 SRF JASPAR yes 82395942
chr12 46949974 46949992 SRF JASPAR yes 120637503
chr12 46949975 46949990 MEF2C JASPAR yes 82395943
chr12 46949975 46949990 MEF2C JASPAR yes 120637504
chr12 46949976 46949988 MEF2B JASPAR yes 82395944
chr12 46949976 46949988 MEF2B JASPAR yes 120637505
chr12 46949978 46949982 YY1 TRANSFAC yes 82395945
chr12 46949978 46949982 YY1 TRANSFAC yes 120637506
chr12 46949987 46949990 MYB TRANSFAC yes 82395946
chr12 46949987 46949990 MYB TRANSFAC yes 120637507
chr12 46950034 46950043 SOX9 JASPAR yes 82395947
chr12 46950034 46950043 SOX9 JASPAR yes 120637508
chr12 46950034 46950049 FOXA1 JASPAR yes 82395948
chr12 46950034 46950049 FOXA1 JASPAR yes 120637509
chr12 46950035 46950047 FOXI1 JASPAR yes 82395949
chr12 46950035 46950047 FOXI1 JASPAR yes 120637510
chr12 46950035 46950050 FOXP1 JASPAR yes 82395950
chr12 46950035 46950050 FOXP1 JASPAR yes 120637511
chr12 46950036 46950045 SRY JASPAR yes 82395951
chr12 46950036 46950045 SRY JASPAR yes 120637512
chr12 46950036 46950047 FOXP2 JASPAR yes 82395952
chr12 46950036 46950047 FOXP2 JASPAR yes 120637513
chr12 46950036 46950048 FOXC2 JASPAR yes 82395953
chr12 46950036 46950048 FOXC2 JASPAR yes 120637514
chr12 46950036 46950050 FOXF2 JASPAR yes 82395954
chr12 46950036 46950050 FOXF2 JASPAR yes 120637515
chr12 46950037 46950045 FOXG1 JASPAR yes 82395955
chr12 46950037 46950045 FOXO3 JASPAR yes 82395956
chr12 46950037 46950045 FOXG1 JASPAR yes 120637516
chr12 46950037 46950045 FOXO3 JASPAR yes 120637517
chr12 46950037 46950048 FOXB1 JASPAR yes 82395957
chr12 46950037 46950048 FOXC1 JASPAR yes 82395958
chr12 46950037 46950048 FOXB1 JASPAR yes 120637518
chr12 46950037 46950048 FOXC1 JASPAR yes 120637519
chr12 46950038 46950049 FOXA1 JASPAR yes 82395959
chr12 46950038 46950049 FOXH1 JASPAR yes 82395960
chr12 46950038 46950049 FOXA1 JASPAR yes 120637520
chr12 46950038 46950049 FOXH1 JASPAR yes 120637521
chr12 46950042 46950046 YY1 TRANSFAC yes 82395961
chr12 46950042 46950046 YY1 TRANSFAC yes 120637522
chr12 46950054 46950064 HOXA13 JASPAR yes 82395962
chr12 46950054 46950064 HOXA13 JASPAR yes 120637523
chr12 46950092 46950106 POU1F1 JASPAR yes 82395963
chr12 46950092 46950106 POU1F1 JASPAR yes 120637524
chr12 46950093 46950105 POU3F1 JASPAR yes 82395964
chr12 46950093 46950105 POU3F2 JASPAR yes 82395965
chr12 46950093 46950105 POU3F1 JASPAR yes 120637525
chr12 46950093 46950105 POU3F2 JASPAR yes 120637526
chr12 46950093 46950106 POU3F3 JASPAR yes 82395966
chr12 46950093 46950106 POU3F3 JASPAR yes 120637527
chr12 46950094 46950098 YY1 TRANSFAC yes 82395967
chr12 46950094 46950098 YY1 TRANSFAC yes 120637528
chr12 46950094 46950106 POU2F1 JASPAR yes 82395968
chr12 46950094 46950106 POU2F1 JASPAR yes 120637529
chr12 46950102 46950115 ATF4 JASPAR yes 82395969
chr12 46950102 46950115 ATF4 JASPAR yes 120637530
chr12 46950132 46950142 RORA JASPAR yes 82395970
chr12 46950132 46950142 RORA JASPAR yes 120637531
chr12 46950133 46950144 ESRRA JASPAR yes 82395971
chr12 46950133 46950144 ESRRB JASPAR yes 82395972
chr12 46950133 46950144 ESRRA JASPAR yes 120637532
chr12 46950133 46950144 ESRRB JASPAR yes 120637533
chr12 46950135 46950143 NR4A2 JASPAR yes 82395973
chr12 46950135 46950143 NR4A2 JASPAR yes 120637534
chr12 46950137 46950141 ESR1 TRANSFAC yes 82395974
chr12 46950137 46950141 ESR1 TRANSFAC yes 120637535
chr12 46950140 46950154 BATF3 JASPAR yes 82395975
chr12 46950140 46950154 BATF3 JASPAR yes 120637536
chr12 46950146 46950150 YY1 TRANSFAC yes 82395976
chr12 46950146 46950150 YY1 TRANSFAC yes 120637537
chr12 46950146 46950161 JUND JASPAR yes 82395977
chr12 46950146 46950161 JUND JASPAR yes 120637538
chr12 46950157 46950167 RELA JASPAR yes 82395978
chr12 46950157 46950167 RELA JASPAR yes 120637539
chr12 46950157 46950168 NFKB1 JASPAR yes 82395979
chr12 46950157 46950168 NFKB1 JASPAR yes 120637540
chr12 46950166 46950181 HNF4A JASPAR yes 82395980
chr12 46950166 46950181 HNF4A JASPAR yes 120637541
chr12 46950167 46950181 NR2F1 JASPAR yes 82395981
chr12 46950167 46950181 NR2F1 JASPAR yes 120637542
chr12 46950167 46950182 HNF4G JASPAR yes 82395982
chr12 46950167 46950182 HNF4G JASPAR yes 120637543
chr12 46950180 46950184 TEAD2 TRANSFAC yes 82395983
chr12 46950180 46950184 TEAD2 TRANSFAC yes 120637544
chr12 46950187 46950193 GATA3 JASPAR yes 82395984
chr12 46950187 46950193 GATA3 JASPAR yes 120637545
chr12 46950213 46950223 NFATC3 JASPAR yes 82395985
chr12 46950213 46950223 NFATC3 JASPAR yes 120637546
chr12 46950215 46950222 NFATC2 JASPAR yes 82395986
chr12 46950215 46950222 NFATC2 JASPAR yes 120637547
chr12 46950230 46950245 STAT1 JASPAR yes 82395987
chr12 46950230 46950245 STAT1 JASPAR yes 120637548
chr12 46950231 46950239 HOXA5 JASPAR yes 82395988
chr12 46950231 46950239 HOXA5 JASPAR yes 120637549
SNP sites on vista13242[chr12:46949913-46950236]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 46949922 rs549755041 C A,T
EP300 MYF6
2605370
chr12 46949987 rs555411442 G A
CEBPB EP300 MEF2A MEF2B MEF2C MYB SRF
2605371
chr12 46950111 rs2471605 C T
ATF4 CEBPB EP300 JUN JUND STAT3
2605372
Genes possibly regulated by vista13242[chr12:46949913-46950236]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista13242[chr12:46949913-46950236]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results