EnhancerDB
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  3. rs549755041[chr12:46949922]
Enhancers that have rs549755041[chr12:46949922]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46935165 46958895 enh14680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr12 46949913 46950236 vista13242
VISTA
Transcript factors that have rs549755041[chr12:46949922]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46949640 46950797 ZNF143 GTRD no Epithelial (MCF-7) 21542472
chr12 46949640 46950797 ZNF143 GTRD no Epithelial (MCF-7) 108027919
chr12 46949723 46950798 ZNF143 GTRD no Epithelial (MCF-7) 21542473
chr12 46949723 46950798 ZNF143 GTRD no Epithelial (MCF-7) 108027920
chr12 46949748 46950730 ZNF143 GTRD no Epithelial (MCF-7) 21542474
chr12 46949748 46950730 ZNF143 GTRD no Epithelial (MCF-7) 108027921
chr12 46949756 46950820 ZNF143 GTRD no Epithelial (MCF-7) 21542475
chr12 46949756 46950820 ZNF143 GTRD no Epithelial (MCF-7) 108027922
chr12 46949762 46950931 ZNF143 GTRD no Epithelial (MCF-7) 21542476
chr12 46949762 46950931 ZNF143 GTRD no Epithelial (MCF-7) 108027923
chr12 46949770 46950838 ZNF274 GTRD no Cervix (HeLa-S3) 21542477
chr12 46949770 46950838 ZNF274 GTRD no Cervix (HeLa-S3) 108027924
chr12 46949788 46950566 ZNF143 GTRD no Epithelial (MCF-7) 21542478
chr12 46949788 46950566 ZNF143 GTRD no Epithelial (MCF-7) 108027925
chr12 46949788 46950831 ZNF274 GTRD no Cervix (HeLa-S3) 21542479
chr12 46949788 46950831 ZNF274 GTRD no Cervix (HeLa-S3) 108027926
chr12 46949798 46950822 ZNF143 GTRD no Epithelial (MCF-7) 21542480
chr12 46949798 46950822 ZNF143 GTRD no Epithelial (MCF-7) 108027927
chr12 46949803 46950267 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21542481
chr12 46949803 46950267 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108027928
chr12 46949809 46950791 ZNF143 GTRD no Epithelial (MCF-7) 21542482
chr12 46949809 46950791 ZNF143 GTRD no Epithelial (MCF-7) 108027929
chr12 46949810 46950460 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542483
chr12 46949810 46950460 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027930
chr12 46949818 46950759 ZNF143 GTRD no Epithelial (MCF-7) 21542484
chr12 46949818 46950759 ZNF143 GTRD no Epithelial (MCF-7) 108027931
chr12 46949819 46950675 ZNF143 GTRD no Epithelial (MCF-7) 21542485
chr12 46949819 46950675 ZNF143 GTRD no Epithelial (MCF-7) 108027932
chr12 46949827 46950203 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21542486
chr12 46949827 46950203 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108027933
chr12 46949843 46950383 EP300 UCSC Txn Factor no Conserved 108027934
chr12 46949843 46950383 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027935
chr12 46949848 46950424 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027936
chr12 46949854 46950705 ZBTB33 GTRD no Brain (SK-N-SH) 108027937
chr12 46949858 46950688 ZNF143 GTRD no Epithelial (MCF-7) 21542487
chr12 46949858 46950688 ZNF143 GTRD no Epithelial (MCF-7) 108027938
chr12 46949860 46950712 ZNF143 GTRD no Epithelial (MCF-7) 21542488
chr12 46949860 46950712 ZNF143 GTRD no Epithelial (MCF-7) 108027939
chr12 46949860 46950716 ZBTB33 GTRD no Brain (SK-N-SH) 108027940
chr12 46949865 46950546 ZNF143 GTRD no Epithelial (MCF-7) 21542489
chr12 46949865 46950546 ZNF143 GTRD no Epithelial (MCF-7) 108027941
chr12 46949868 46950372 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542490
chr12 46949868 46950372 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027942
chr12 46949869 46950245 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542491
chr12 46949869 46950245 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027943
chr12 46949874 46950358 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027944
chr12 46949874 46950645 ZNF143 GTRD no Epithelial (MCF-7) 21542492
chr12 46949874 46950645 ZNF143 GTRD no Epithelial (MCF-7) 108027945
chr12 46949877 46950829 ZNF143 GTRD no Epithelial (MCF-7) 21542493
chr12 46949877 46950829 ZNF143 GTRD no Epithelial (MCF-7) 108027946
chr12 46949880 46950604 ZNF143 GTRD no Epithelial (MCF-7) 21542494
chr12 46949880 46950604 ZNF143 GTRD no Epithelial (MCF-7) 108027947
chr12 46949887 46950744 ZNF274 GTRD no Cervix (HeLa-S3) 21542495
chr12 46949887 46950744 ZNF274 GTRD no Cervix (HeLa-S3) 108027948
chr12 46949896 46951227 ZBTB33 GTRD no Brain (SK-N-SH) 108027949
chr12 46949899 46950579 ZNF143 GTRD no Epithelial (MCF-7) 21542496
chr12 46949899 46950579 ZNF143 GTRD no Epithelial (MCF-7) 108027950
chr12 46949900 46950592 ZBTB33 GTRD no Brain (SK-N-SH) 108027951
chr12 46949907 46950317 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108027952
chr12 46949910 46950603 ZNF143 GTRD no Epithelial (MCF-7) 21542497
chr12 46949910 46950603 ZNF143 GTRD no Epithelial (MCF-7) 108027953
chr12 46949915 46950615 ZBTB33 GTRD no Brain (SK-N-SH) 108027954
chr12 46949917 46950676 ZBTB33 GTRD no Brain (SK-N-SH) 108027955
chr12 46949919 46949929 MYF6 JASPAR yes 82395937
chr12 46949919 46949929 MYF6 JASPAR yes 120637498
chr12 46949919 46950395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21542498
chr12 46949919 46950395 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108027956
chr12 46949921 46950201 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21542499
chr12 46949921 46950201 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108027957
chr12 46949921 46950531 ZNF143 GTRD no Epithelial (MCF-7) 21542500
chr12 46949921 46950531 ZNF143 GTRD no Epithelial (MCF-7) 108027958
chr12 46949922 46950620 ZNF143 GTRD no Epithelial (MCF-7) 21542501
chr12 46949922 46950620 ZNF143 GTRD no Epithelial (MCF-7) 108027959
Genes associated with rs549755041[chr12:46949922], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More