EnhancerDB
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  3. vista1328[chr1:41962532-41962651]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1328[chr1:41962532-41962651]
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Tissue distribution of vista1328
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Transcription factor that possibly regulate vista1328[chr1:41962532-41962651]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41961813 41962597 TCF7L2 UCSC Txn Factor no Conserved 107802955
chr1 41962520 41962541 ZNF263 JASPAR yes 28395518
chr1 41962520 41962541 ZNF263 JASPAR yes 118278607
chr1 41962532 41962537 ETS2 TRANSFAC yes 28395519
chr1 41962532 41962537 ETS2 TRANSFAC yes 118278608
chr1 41962534 41962545 FLI1 JASPAR yes 28395520
chr1 41962534 41962545 FLI1 JASPAR yes 118278609
chr1 41962535 41962540 ETS2 TRANSFAC yes 28395521
chr1 41962535 41962540 ETS2 TRANSFAC yes 118278610
chr1 41962537 41962547 SP1 JASPAR yes 28395522
chr1 41962537 41962547 SP1 JASPAR yes 118278611
chr1 41962543 41962553 SP1 JASPAR yes 28395523
chr1 41962543 41962553 SP1 JASPAR yes 118278612
chr1 41962544 41962554 SP1 JASPAR yes 28395524
chr1 41962544 41962554 SP1 JASPAR yes 118278613
chr1 41962544 41962564 ESR1 JASPAR yes 28395525
chr1 41962544 41962564 ESR1 JASPAR yes 118278614
chr1 41962551 41962555 H4TF2 TRANSFAC yes 28395526
chr1 41962551 41962555 H4TF2 TRANSFAC yes 118278615
chr1 41962579 41962592 NFKB2 JASPAR yes 28395527
chr1 41962579 41962592 NFKB2 JASPAR yes 118278616
chr1 41962579 41962598 RFX2 JASPAR yes 28395528
chr1 41962579 41962598 RFX2 JASPAR yes 118278617
chr1 41962580 41962590 REL JASPAR yes 28395529
chr1 41962580 41962590 REL JASPAR yes 118278618
chr1 41962580 41962591 NFKB1 JASPAR yes 28395530
chr1 41962580 41962591 NFKB1 JASPAR yes 118278619
chr1 41962583 41962598 STAT1 JASPAR yes 28395531
chr1 41962583 41962598 STAT1 JASPAR yes 118278620
chr1 41962584 41962599 TFAP2A JASPAR yes 28395532
chr1 41962584 41962599 TFAP2A JASPAR yes 118278621
chr1 41962585 41962596 STAT1 JASPAR yes 28395533
chr1 41962585 41962596 STAT3 JASPAR yes 28395534
chr1 41962585 41962596 STAT1 JASPAR yes 118278622
chr1 41962585 41962596 STAT3 JASPAR yes 118278623
chr1 41962586 41962601 TFAP2A JASPAR yes 28395535
chr1 41962586 41962601 TFAP2C JASPAR yes 28395536
chr1 41962586 41962601 TFAP2A JASPAR yes 118278624
chr1 41962586 41962601 TFAP2C JASPAR yes 118278625
chr1 41962599 41962618 REST JASPAR yes 28395537
chr1 41962599 41962618 REST JASPAR yes 118278626
chr1 41962605 41962624 REST JASPAR yes 28395538
chr1 41962605 41962624 REST JASPAR yes 118278627
chr1 41962620 41962624 NFE TRANSFAC yes 28395539
chr1 41962620 41962624 NFE TRANSFAC yes 118278628
chr1 41962634 41962644 SREBF2 JASPAR yes 28395540
chr1 41962634 41962644 SREBF2 JASPAR yes 118278629
chr1 41962638 41962649 ESRRA JASPAR yes 28395541
chr1 41962638 41962649 ESRRA JASPAR yes 118278630
SNP sites on vista1328[chr1:41962532-41962651]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41962538 rs147467898 G A
ETS2 FLI1 SP1 TCF7L2 ZNF263
262317
chr1 41962600 rs13375784 C G
REST TFAP2A TFAP2C
262318
chr1 41962632 rs184733864 G A no 262319
Genes possibly regulated by vista1328[chr1:41962532-41962651]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41944446 41950344 - EDN2 ENSG00000127129.5 41950344 0.82 0.97 576 87812
Expression level of Genes
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miRNAs possibly regulated by vista1328[chr1:41962532-41962651]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.12029359430604983 0.790987 0.676023 1312
Expression level of miRNAs
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