EnhancerDB
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  3. rs147467898[chr1:41962538]
Enhancers that have rs147467898[chr1:41962538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
chr1 41962532 41962651 vista1328
VISTA
Transcript factors that have rs147467898[chr1:41962538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41961813 41962597 TCF7L2 UCSC Txn Factor no Conserved 107802955
chr1 41962520 41962541 ZNF263 JASPAR yes 28395518
chr1 41962520 41962541 ZNF263 JASPAR yes 118278607
chr1 41962534 41962545 FLI1 JASPAR yes 28395520
chr1 41962534 41962545 FLI1 JASPAR yes 118278609
chr1 41962535 41962540 ETS2 TRANSFAC yes 28395521
chr1 41962535 41962540 ETS2 TRANSFAC yes 118278610
chr1 41962537 41962547 SP1 JASPAR yes 28395522
chr1 41962537 41962547 SP1 JASPAR yes 118278611
Genes associated with rs147467898[chr1:41962538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More