EnhancerDB
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  3. vista1329[chr1:41966127-41966464]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1329[chr1:41966127-41966464]
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Tissue distribution of vista1329
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Transcription factor that possibly regulate vista1329[chr1:41966127-41966464]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 41966151 41966161 NKX2-3 JASPAR yes 28396086
chr1 41966151 41966161 NKX2-3 JASPAR yes 118278631
chr1 41966164 41966179 RFX5 JASPAR yes 28396087
chr1 41966164 41966179 RFX5 JASPAR yes 118278632
chr1 41966174 41966195 ZNF263 JASPAR yes 28396088
chr1 41966174 41966195 ZNF263 JASPAR yes 118278633
chr1 41966185 41966193 EHF JASPAR yes 28396089
chr1 41966185 41966193 EHF JASPAR yes 118278634
chr1 41966189 41966194 ETS2 TRANSFAC yes 28396090
chr1 41966189 41966194 ETS2 TRANSFAC yes 118278635
chr1 41966189 41966197 FEV JASPAR yes 28396091
chr1 41966189 41966197 FEV JASPAR yes 118278636
chr1 41966190 41966197 SPI1 JASPAR yes 28396092
chr1 41966190 41966197 SPI1 JASPAR yes 118278637
chr1 41966204 41966214 SP1 JASPAR yes 28396093
chr1 41966204 41966214 SP1 JASPAR yes 118278638
chr1 41966206 41966211 SP1 TRANSFAC yes 28396094
chr1 41966206 41966211 SP1 TRANSFAC yes 118278639
chr1 41966207 41966212 SP1 TRANSFAC yes 28396095
chr1 41966207 41966212 SP1 TRANSFAC yes 118278640
chr1 41966207 41966213 SP1 TRANSFAC yes 28396096
chr1 41966207 41966213 SP1 TRANSFAC yes 118278641
chr1 41966211 41966215 LFA1 TRANSFAC yes 28396097
chr1 41966211 41966215 LFA1 TRANSFAC yes 118278642
chr1 41966220 41966232 INSM1 JASPAR yes 28396098
chr1 41966220 41966232 INSM1 JASPAR yes 118278643
chr1 41966224 41966233 HIC2 JASPAR yes 28396099
chr1 41966224 41966233 HIC2 JASPAR yes 118278644
chr1 41966227 41966231 LFA1 TRANSFAC yes 28396100
chr1 41966227 41966231 LFA1 TRANSFAC yes 118278645
chr1 41966238 41966242 LFA1 TRANSFAC yes 28396101
chr1 41966238 41966242 LFA1 TRANSFAC yes 118278646
chr1 41966288 41966298 TFCP2 JASPAR yes 28396102
chr1 41966288 41966298 TFCP2 JASPAR yes 118278647
chr1 41966307 41966312 GATA1 TRANSFAC yes 28396103
chr1 41966307 41966312 GATA1 TRANSFAC yes 118278648
chr1 41966310 41966321 JUND JASPAR yes 28396104
chr1 41966310 41966321 JUND JASPAR yes 118278649
chr1 41966312 41966318 JUN TRANSFAC yes 28396105
chr1 41966312 41966318 JUN TRANSFAC yes 118278650
chr1 41966324 41966339 MEF2A JASPAR yes 28396106
chr1 41966324 41966339 MEF2A JASPAR yes 118278651
chr1 41966325 41966340 MEF2C JASPAR yes 28396107
chr1 41966325 41966340 MEF2C JASPAR yes 118278652
chr1 41966326 41966338 MEF2A JASPAR yes 28396108
chr1 41966326 41966338 MEF2B JASPAR yes 28396109
chr1 41966326 41966338 MEF2D JASPAR yes 28396110
chr1 41966326 41966338 MEF2A JASPAR yes 118278653
chr1 41966326 41966338 MEF2B JASPAR yes 118278654
chr1 41966326 41966338 MEF2D JASPAR yes 118278655
chr1 41966326 41966347 ZNF263 JASPAR yes 28396111
chr1 41966326 41966347 ZNF263 JASPAR yes 118278656
chr1 41966327 41966337 MEF2A JASPAR yes 28396112
chr1 41966327 41966337 MEF2A JASPAR yes 118278657
chr1 41966330 41966334 YY1 TRANSFAC yes 28396113
chr1 41966330 41966334 YY1 TRANSFAC yes 118278658
chr1 41966352 41966363 FOXA1 JASPAR yes 28396114
chr1 41966352 41966363 FOXA1 JASPAR yes 118278659
chr1 41966352 41966367 FOXA1 JASPAR yes 28396115
chr1 41966352 41966367 FOXA1 JASPAR yes 118278660
chr1 41966382 41966402 RREB1 JASPAR yes 28396116
chr1 41966382 41966402 RREB1 JASPAR yes 118278661
chr1 41966389 41966394 SP1 TRANSFAC yes 28396117
chr1 41966389 41966394 SP1 TRANSFAC yes 118278662
chr1 41966391 41966401 ZNF740 JASPAR yes 28396118
chr1 41966391 41966401 ZNF740 JASPAR yes 118278663
chr1 41966392 41966402 SP1 JASPAR yes 28396119
chr1 41966392 41966402 ZNF740 JASPAR yes 28396120
chr1 41966392 41966402 SP1 JASPAR yes 118278664
chr1 41966392 41966402 ZNF740 JASPAR yes 118278665
chr1 41966393 41966403 SP1 JASPAR yes 28396121
chr1 41966393 41966403 ZNF740 JASPAR yes 28396122
chr1 41966393 41966403 SP1 JASPAR yes 118278666
chr1 41966393 41966403 ZNF740 JASPAR yes 118278667
chr1 41966394 41966404 ZNF740 JASPAR yes 28396123
chr1 41966394 41966404 ZNF740 JASPAR yes 118278668
chr1 41966414 41966419 ETS2 TRANSFAC yes 28396124
chr1 41966414 41966419 ETS2 TRANSFAC yes 118278669
chr1 41966417 41966426 ZEB1 JASPAR yes 28396125
chr1 41966417 41966426 ZEB1 JASPAR yes 118278670
chr1 41966418 41966428 FIGLA JASPAR yes 28396126
chr1 41966418 41966428 FIGLA JASPAR yes 118278671
chr1 41966420 41966425 USF2 TRANSFAC yes 28396127
chr1 41966420 41966425 USF2 TRANSFAC yes 118278672
chr1 41966433 41966444 EBF1 JASPAR yes 28396128
chr1 41966433 41966444 EBF1 JASPAR yes 118278673
chr1 41966458 41966478 ESR1 JASPAR yes 28396129
chr1 41966458 41966478 ESR1 JASPAR yes 118278674
chr1 41966462 41966480 ESR2 JASPAR yes 28396130
chr1 41966462 41966480 ESR2 JASPAR yes 118278675
chr1 41966463 41966478 ESR2 JASPAR yes 28396131
chr1 41966463 41966478 ESR2 JASPAR yes 118278676
SNP sites on vista1329[chr1:41966127-41966464]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 41966182 rs146218744 C T
ZNF263
262373
chr1 41966197 rs373061060 T C
FEV SPI1
262374
chr1 41966294 rs4603128 G A
TFCP2
262375
chr1 41966362 rs4147318 C G,T
FOXA1
262376
chr1 41966386 rs563604541 G T
RREB1
262377
chr1 41966392 rs11399989 G GC,GCC,GCCC
RREB1 SP1 ZNF740
262378
chr1 41966392 rs145590926 G GC,GCC
RREB1 SP1 ZNF740
262379
chr1 41966392 rs386366789 G GC
RREB1 SP1 ZNF740
262380
chr1 41966393 rs183283422 C A
RREB1 SP1 ZNF740
262381
Genes possibly regulated by vista1329[chr1:41966127-41966464]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41944446 41950344 - EDN2 ENSG00000127129.5 41950344 0.82 0.97 576 84217
Expression level of Genes
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miRNAs possibly regulated by vista1329[chr1:41966127-41966464]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.1264220257257275 0.790987 0.676023 1312
Expression level of miRNAs
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