EnhancerDB
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  3. rs145590926[chr1:41966392]
Enhancers that have rs145590926[chr1:41966392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
chr1 41966127 41966464 vista1329
VISTA
Transcript factors that have rs145590926[chr1:41966392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41966382 41966402 RREB1 JASPAR yes 28396116
chr1 41966382 41966402 RREB1 JASPAR yes 118278661
chr1 41966389 41966394 SP1 TRANSFAC yes 28396117
chr1 41966389 41966394 SP1 TRANSFAC yes 118278662
chr1 41966391 41966401 ZNF740 JASPAR yes 28396118
chr1 41966391 41966401 ZNF740 JASPAR yes 118278663
chr1 41966392 41966402 SP1 JASPAR yes 28396119
chr1 41966392 41966402 ZNF740 JASPAR yes 28396120
chr1 41966392 41966402 SP1 JASPAR yes 118278664
chr1 41966392 41966402 ZNF740 JASPAR yes 118278665
Genes associated with rs145590926[chr1:41966392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More