EnhancerDB
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  3. vista13354[chr12:50067341-50067888]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13354[chr12:50067341-50067888]
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Tissue distribution of vista13354
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Transcription factor that possibly regulate vista13354[chr12:50067341-50067888]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 50067186 50067642 CTCF UCSC Txn Factor no Conserved 108030705
chr12 50067415 50067676 UBTF UCSC Txn Factor no Conserved 108030735
chr12 50067324 50067343 REST JASPAR yes 82400926
chr12 50067324 50067343 REST JASPAR yes 120791820
chr12 50067334 50067346 NHLH1 JASPAR yes 82400927
chr12 50067334 50067346 NHLH1 JASPAR yes 120791822
chr12 50067335 50067345 NHLH1 JASPAR yes 82400928
chr12 50067335 50067345 TFAP4 JASPAR yes 82400929
chr12 50067335 50067345 NHLH1 JASPAR yes 120791823
chr12 50067335 50067345 TFAP4 JASPAR yes 120791824
chr12 50067347 50067352 MYC TRANSFAC yes 82400930
chr12 50067347 50067352 MYC TRANSFAC yes 120791825
chr12 50067368 50067372 LFA1 TRANSFAC yes 82400931
chr12 50067368 50067372 LFA1 TRANSFAC yes 120791826
chr12 50067382 50067396 GLIS3 JASPAR yes 82400932
chr12 50067382 50067396 GLIS3 JASPAR yes 120791827
chr12 50067384 50067392 TBX15 JASPAR yes 82400933
chr12 50067384 50067392 TBX15 JASPAR yes 120791828
chr12 50067385 50067390 SP1 TRANSFAC yes 82400934
chr12 50067385 50067390 SP1 TRANSFAC yes 120791829
chr12 50067458 50067473 PRDM1 JASPAR yes 82400935
chr12 50067458 50067473 PRDM1 JASPAR yes 120791830
chr12 50067467 50067482 MEF2A JASPAR yes 82400936
chr12 50067467 50067482 MEF2A JASPAR yes 120791831
chr12 50067468 50067483 MEF2C JASPAR yes 82400937
chr12 50067468 50067483 MEF2C JASPAR yes 120791832
chr12 50067469 50067481 MEF2D JASPAR yes 82400938
chr12 50067469 50067481 MEF2D JASPAR yes 120791833
chr12 50067471 50067475 YY1 TRANSFAC yes 82400939
chr12 50067471 50067475 YY1 TRANSFAC yes 120791834
chr12 50067489 50067492 MYB TRANSFAC yes 82400940
chr12 50067489 50067492 MYB TRANSFAC yes 120791835
chr12 50067515 50067521 SP1 TRANSFAC yes 82400941
chr12 50067515 50067521 SP1 TRANSFAC yes 120791836
chr12 50067516 50067521 SP1 TRANSFAC yes 82400942
chr12 50067516 50067521 SP1 TRANSFAC yes 120791837
chr12 50067516 50067527 E2F4 JASPAR yes 82400943
chr12 50067516 50067527 E2F6 JASPAR yes 82400944
chr12 50067516 50067527 E2F4 JASPAR yes 120791838
chr12 50067516 50067527 E2F6 JASPAR yes 120791839
chr12 50067517 50067522 SP1 TRANSFAC yes 82400945
chr12 50067517 50067522 SP1 TRANSFAC yes 120791840
chr12 50067520 50067531 NFKB1 JASPAR yes 82400946
chr12 50067520 50067531 NFKB1 JASPAR yes 120791841
chr12 50067534 50067544 SP1 JASPAR yes 82400947
chr12 50067534 50067544 SP1 JASPAR yes 120791842
chr12 50067539 50067546 SP1 TRANSFAC yes 82400948
chr12 50067539 50067546 SP1 TRANSFAC yes 120791843
chr12 50067541 50067546 SP1 TRANSFAC yes 82400949
chr12 50067541 50067546 SP1 TRANSFAC yes 120791844
chr12 50067542 50067555 TFAP2A JASPAR yes 82400950
chr12 50067542 50067555 TFAP2A JASPAR yes 120791845
chr12 50067597 50067611 XBP1 JASPAR yes 82400951
chr12 50067597 50067611 XBP1 JASPAR yes 120791846
chr12 50067598 50067612 CREB3 JASPAR yes 82400952
chr12 50067598 50067612 CREB3L1 JASPAR yes 82400953
chr12 50067598 50067612 CREB3 JASPAR yes 120791847
chr12 50067598 50067612 CREB3L1 JASPAR yes 120791848
chr12 50067603 50067608 ATF1 TRANSFAC yes 82400954
chr12 50067603 50067608 ATF1 TRANSFAC yes 120791849
chr12 50067610 50067621 FOXA1 JASPAR yes 82400955
chr12 50067610 50067621 FOXA1 JASPAR yes 120791850
chr12 50067611 50067623 FOXI1 JASPAR yes 82400956
chr12 50067611 50067623 FOXI1 JASPAR yes 120791851
chr12 50067611 50067626 FOXP1 JASPAR yes 82400957
chr12 50067611 50067626 FOXP1 JASPAR yes 120791852
chr12 50067612 50067623 FOXP2 JASPAR yes 82400958
chr12 50067612 50067623 FOXP2 JASPAR yes 120791853
chr12 50067612 50067626 FOXF2 JASPAR yes 82400959
chr12 50067612 50067626 FOXF2 JASPAR yes 120791854
chr12 50067613 50067621 FOXG1 JASPAR yes 82400960
chr12 50067613 50067621 FOXO3 JASPAR yes 82400961
chr12 50067613 50067621 FOXG1 JASPAR yes 120791855
chr12 50067613 50067621 FOXO3 JASPAR yes 120791856
chr12 50067615 50067623 GATA3 JASPAR yes 82400962
chr12 50067615 50067623 GATA3 JASPAR yes 120791857
chr12 50067622 50067631 SOX9 JASPAR yes 82400963
chr12 50067622 50067631 SOX9 JASPAR yes 120791858
chr12 50067646 50067649 MYB TRANSFAC yes 82400964
chr12 50067646 50067649 MYB TRANSFAC yes 120791859
chr12 50067648 50067660 E2F8 JASPAR yes 82400965
chr12 50067648 50067660 E2F8 JASPAR yes 120791860
chr12 50067657 50067673 SOX4 JASPAR yes 82400966
chr12 50067657 50067673 SOX4 JASPAR yes 120791861
chr12 50067669 50067675 LEF1 TRANSFAC yes 82400967
chr12 50067669 50067675 SOX10 JASPAR yes 82400968
chr12 50067669 50067675 LEF1 TRANSFAC yes 120791862
chr12 50067669 50067675 SOX10 JASPAR yes 120791863
chr12 50067676 50067687 DUX4 JASPAR yes 82400969
chr12 50067676 50067687 DUX4 JASPAR yes 120791864
chr12 50067712 50067716 H4TF2 TRANSFAC yes 82400970
chr12 50067712 50067716 H4TF2 TRANSFAC yes 120791865
chr12 50067733 50067748 TP53 JASPAR yes 82400971
chr12 50067733 50067748 TP53 JASPAR yes 120791866
chr12 50067734 50067752 SRF JASPAR yes 82400972
chr12 50067734 50067752 SRF JASPAR yes 120791867
chr12 50067736 50067740 H4TF2 TRANSFAC yes 82400973
chr12 50067736 50067740 H4TF2 TRANSFAC yes 120791868
chr12 50067741 50067755 SPIC JASPAR yes 82400974
chr12 50067741 50067755 SPIC JASPAR yes 120791869
chr12 50067747 50067752 ETS2 TRANSFAC yes 82400975
chr12 50067747 50067752 ETS2 TRANSFAC yes 120791870
chr12 50067761 50067767 SP1 TRANSFAC yes 82400976
chr12 50067761 50067767 SP1 TRANSFAC yes 120791871
chr12 50067763 50067783 RREB1 JASPAR yes 82400977
chr12 50067763 50067783 RREB1 JASPAR yes 120791872
chr12 50067783 50067789 MZF1 JASPAR yes 82400978
chr12 50067783 50067789 MZF1 JASPAR yes 120791873
chr12 50067788 50067806 NFYA JASPAR yes 82400979
chr12 50067788 50067806 NFYA JASPAR yes 120791874
chr12 50067799 50067811 INSM1 JASPAR yes 82400980
chr12 50067799 50067811 INSM1 JASPAR yes 120791875
chr12 50067817 50067823 PEA3 TRANSFAC yes 82400981
chr12 50067817 50067823 PEA3 TRANSFAC yes 120791876
chr12 50067817 50067828 FLI1 JASPAR yes 82400982
chr12 50067817 50067828 FLI1 JASPAR yes 120791877
chr12 50067817 50067838 ZNF263 JASPAR yes 82400983
chr12 50067817 50067838 ZNF263 JASPAR yes 120791878
chr12 50067818 50067826 FEV JASPAR yes 82400984
chr12 50067818 50067826 FEV JASPAR yes 120791879
chr12 50067819 50067833 STAT1 JASPAR yes 82400985
chr12 50067819 50067833 STAT1 JASPAR yes 120791880
chr12 50067819 50067834 STAT2 JASPAR yes 82400986
chr12 50067819 50067834 STAT2 JASPAR yes 120791881
chr12 50067826 50067838 TAL1 JASPAR yes 82400987
chr12 50067826 50067838 TAL1 JASPAR yes 120791882
chr12 50067828 50067840 TAL1 JASPAR yes 82400988
chr12 50067828 50067840 TAL1 JASPAR yes 120791883
chr12 50067839 50067843 ESR1 TRANSFAC yes 82400989
chr12 50067839 50067843 ESR1 TRANSFAC yes 120791884
chr12 50067872 50067891 PAX5 JASPAR yes 82400990
chr12 50067872 50067891 PAX5 JASPAR yes 120791885
SNP sites on vista13354[chr12:50067341-50067888]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 50067425 rs558600839 G A,T
CTCF UBTF
2622381
chr12 50067444 rs575295940 G A
CTCF UBTF
2622382
chr12 50067549 rs117085524 G C
CTCF TFAP2A UBTF
2622383
chr12 50067591 rs190809567 T C
CTCF UBTF
2622384
chr12 50067637 rs34574061 C A,T
CTCF UBTF
2622385
chr12 50067670 rs182021696 C G
LEF1 SOX10 SOX4 UBTF
2622386
chr12 50067686 rs567493358 C A
DUX4
2622387
chr12 50067779 rs141205372 A G
RREB1
2622388
chr12 50067873 rs116080564 G A
PAX5
2622389
chr12 50067878 rs377618030 G A
PAX5
2622390
Genes possibly regulated by vista13354[chr12:50067341-50067888]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 49976668 49999422 - FAM186B ENSG00000135436.4 49999422 0.87 1.0 12034 32081
chr12 50031724 50101948 - FMNL3 ENSG00000161791.9 50101948 0.75 1.0 12035 65940
chr12 50101508 50158717 + TMBIM6 ENSG00000139644.8 50101508 0.76 1.0 12036 66380
Expression level of Genes
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miRNAs possibly regulated by vista13354[chr12:50067341-50067888]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results