EnhancerDB
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  3. rs116080564[chr12:50067873]
Enhancers that have rs116080564[chr12:50067873]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50062425 50070695 enh14701
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Lung Heart
chr12 50067341 50067888 vista13354
VISTA
Transcript factors that have rs116080564[chr12:50067873]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50067196 50067920 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21544795
chr12 50067196 50067920 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030706
chr12 50067397 50068121 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21544816
chr12 50067397 50068121 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108030733
chr12 50067872 50067891 PAX5 JASPAR yes 82400990
chr12 50067872 50067891 PAX5 JASPAR yes 120791885
Genes associated with rs116080564[chr12:50067873], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More