EnhancerDB
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  3. vista1338[chr1:42092770-42093067]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1338[chr1:42092770-42093067]
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Tissue distribution of vista1338
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Transcription factor that possibly regulate vista1338[chr1:42092770-42093067]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42092762 42092783 REST JASPAR yes 28403127
chr1 42092762 42092783 REST JASPAR yes 118279019
chr1 42092763 42092782 REST JASPAR yes 28403128
chr1 42092763 42092782 REST JASPAR yes 118279020
chr1 42092770 42092785 HNF4G JASPAR yes 28403129
chr1 42092770 42092785 HNF4G JASPAR yes 118279021
chr1 42092771 42092776 SP1 TRANSFAC yes 28403130
chr1 42092771 42092776 SP1 TRANSFAC yes 118279022
chr1 42092771 42092785 RXRB JASPAR yes 28403131
chr1 42092771 42092785 RXRG JASPAR yes 28403132
chr1 42092771 42092785 RXRB JASPAR yes 118279023
chr1 42092771 42092785 RXRG JASPAR yes 118279024
chr1 42092771 42092786 HNF4A JASPAR yes 28403133
chr1 42092771 42092786 HNF4A JASPAR yes 118279025
chr1 42092772 42092787 TFAP2C JASPAR yes 28403134
chr1 42092772 42092787 TFAP2C JASPAR yes 118279026
chr1 42092780 42092784 LFA1 TRANSFAC yes 28403135
chr1 42092780 42092784 LFA1 TRANSFAC yes 118279027
chr1 42092784 42092801 RARA JASPAR yes 28403136
chr1 42092784 42092801 RXRA JASPAR yes 28403137
chr1 42092784 42092801 RARA JASPAR yes 118279028
chr1 42092784 42092801 RXRA JASPAR yes 118279029
chr1 42092785 42092789 LFA1 TRANSFAC yes 28403138
chr1 42092785 42092789 LFA1 TRANSFAC yes 118279030
chr1 42092785 42092804 CTCF JASPAR yes 28403139
chr1 42092785 42092804 CTCF JASPAR yes 118279031
chr1 42092794 42092800 YY1 JASPAR yes 28403140
chr1 42092794 42092800 YY1 JASPAR yes 118279032
chr1 42092821 42092833 GLI2 JASPAR yes 28403141
chr1 42092821 42092833 GLI2 JASPAR yes 118279033
chr1 42092837 42092846 THAP1 JASPAR yes 28403142
chr1 42092837 42092846 THAP1 JASPAR yes 118279034
chr1 42092853 42092867 JUN JASPAR yes 28403143
chr1 42092853 42092867 JUN JASPAR yes 118279035
chr1 42092856 42092867 FOSL2 JASPAR yes 28403144
chr1 42092856 42092867 JUNB JASPAR yes 28403145
chr1 42092856 42092867 FOSL2 JASPAR yes 118279036
chr1 42092856 42092867 JUNB JASPAR yes 118279037
chr1 42092857 42092868 FOS JASPAR yes 28403146
chr1 42092857 42092868 FOSL1 JASPAR yes 28403147
chr1 42092857 42092868 JUND JASPAR yes 28403148
chr1 42092857 42092868 NFE2 JASPAR yes 28403149
chr1 42092857 42092868 FOS JASPAR yes 118279038
chr1 42092857 42092868 FOSL1 JASPAR yes 118279039
chr1 42092857 42092868 JUND JASPAR yes 118279040
chr1 42092857 42092868 NFE2 JASPAR yes 118279041
chr1 42092858 42092865 JUN TRANSFAC yes 28403150
chr1 42092858 42092865 JUN TRANSFAC yes 118279042
chr1 42092858 42092867 JDP2 JASPAR yes 28403151
chr1 42092858 42092867 JDP2 JASPAR yes 118279043
chr1 42092858 42092869 FOSL2 JASPAR yes 28403152
chr1 42092858 42092869 JUNB JASPAR yes 28403153
chr1 42092858 42092869 FOSL2 JASPAR yes 118279044
chr1 42092858 42092869 JUNB JASPAR yes 118279045
chr1 42092858 42092872 JUN JASPAR yes 28403154
chr1 42092858 42092872 JUN JASPAR yes 118279046
chr1 42092875 42092879 H4TF2 TRANSFAC yes 28403155
chr1 42092875 42092879 H4TF2 TRANSFAC yes 118279047
chr1 42092881 42092895 CREB3L1 JASPAR yes 28403156
chr1 42092881 42092895 CREB3L1 JASPAR yes 118279048
chr1 42092884 42092887 MYB TRANSFAC yes 28403157
chr1 42092884 42092887 MYB TRANSFAC yes 118279049
chr1 42092897 42092909 TEAD1 JASPAR yes 28403158
chr1 42092897 42092909 TEAD1 JASPAR yes 118279050
chr1 42092905 42092918 NFKB2 JASPAR yes 28403159
chr1 42092905 42092918 NFKB2 JASPAR yes 118279051
chr1 42092906 42092911 SP1 TRANSFAC yes 28403160
chr1 42092906 42092911 SP1 TRANSFAC yes 118279052
chr1 42092906 42092916 REL JASPAR yes 28403161
chr1 42092906 42092916 REL JASPAR yes 118279053
chr1 42092906 42092917 NFKB1 JASPAR yes 28403162
chr1 42092906 42092917 NFKB1 JASPAR yes 118279054
chr1 42092907 42092918 NFKB1 JASPAR yes 28403163
chr1 42092907 42092918 NFKB1 JASPAR yes 118279055
chr1 42092912 42092927 RFX5 JASPAR yes 28403164
chr1 42092912 42092927 RFX5 JASPAR yes 118279056
chr1 42092913 42092919 MZF1 JASPAR yes 28403165
chr1 42092913 42092919 MZF1 JASPAR yes 118279057
chr1 42092930 42092942 PKNOX1 JASPAR yes 28403166
chr1 42092930 42092942 PKNOX2 JASPAR yes 28403167
chr1 42092930 42092942 PKNOX1 JASPAR yes 118279058
chr1 42092930 42092942 PKNOX2 JASPAR yes 118279059
chr1 42092952 42092956 YY1 TRANSFAC yes 28403168
chr1 42092952 42092956 YY1 TRANSFAC yes 118279060
chr1 42092966 42092987 ZNF263 JASPAR yes 28403169
chr1 42092966 42092987 ZNF263 JASPAR yes 118279061
chr1 42092969 42092990 ZNF263 JASPAR yes 28403170
chr1 42092969 42092990 ZNF263 JASPAR yes 118279062
chr1 42093013 42093033 RREB1 JASPAR yes 28403171
chr1 42093013 42093033 RREB1 JASPAR yes 118279063
chr1 42093036 42093046 SP1 JASPAR yes 28403172
chr1 42093036 42093046 SP1 JASPAR yes 118279064
chr1 42093057 42093062 SP1 TRANSFAC yes 28403173
chr1 42093057 42093062 SP1 TRANSFAC yes 118279065
SNP sites on vista1338[chr1:42092770-42093067]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42092791 rs10890149 T A
CTCF RARA RXRA
263202
chr1 42092929 rs752011 C T no 263203
chr1 42093015 rs752010 C T
RREB1
263204
Genes possibly regulated by vista1338[chr1:42092770-42093067]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1338[chr1:42092770-42093067]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.1970045000251337 0.790987 0.676023 1312
Expression level of miRNAs
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