EnhancerDB
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  3. rs10890149[chr1:42092791]
Enhancers that have rs10890149[chr1:42092791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
chr1 42092770 42093067 vista1338
VISTA
Transcript factors that have rs10890149[chr1:42092791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42092628 42092938 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107802962
chr1 42092784 42092801 RARA JASPAR yes 28403136
chr1 42092784 42092801 RXRA JASPAR yes 28403137
chr1 42092784 42092801 RARA JASPAR yes 118279028
chr1 42092784 42092801 RXRA JASPAR yes 118279029
chr1 42092785 42092804 CTCF JASPAR yes 28403139
chr1 42092785 42092804 CTCF JASPAR yes 118279031
Genes associated with rs10890149[chr1:42092791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More