EnhancerDB
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  3. vista13480[chr12:52915277-52915747]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13480[chr12:52915277-52915747]
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Tissue distribution of vista13480
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Transcription factor that possibly regulate vista13480[chr12:52915277-52915747]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 52915288 52915303 TFAP2C JASPAR yes 82407382
chr12 52915308 52915318 NFATC3 JASPAR yes 82407383
chr12 52915310 52915317 NFATC2 JASPAR yes 82407384
chr12 52915351 52915371 TP63 JASPAR yes 82407385
chr12 52915352 52915370 TP53 JASPAR yes 82407386
chr12 52915353 52915373 TP53 JASPAR yes 82407387
chr12 52915354 52915369 TP53 JASPAR yes 82407388
chr12 52915379 52915391 PKNOX2 JASPAR yes 82407389
chr12 52915390 52915404 TLX1 JASPAR yes 82407390
chr12 52915400 52915410 MSC JASPAR yes 82407391
chr12 52915413 52915419 MAZ TRANSFAC yes 82407392
chr12 52915443 52915463 RREB1 JASPAR yes 82407393
chr12 52915449 52915461 ZBTB7B JASPAR yes 82407394
chr12 52915459 52915478 CTCF JASPAR yes 82407395
chr12 52915464 52915474 FIGLA JASPAR yes 82407396
chr12 52915471 52915477 PEA3 TRANSFAC yes 82407397
chr12 52915488 52915499 DUX4 JASPAR yes 82407398
chr12 52915499 52915502 MYB TRANSFAC yes 82407399
chr12 52915515 52915530 RUNX2 JASPAR yes 82407400
chr12 52915516 52915525 RUNX2 JASPAR yes 82407401
chr12 52915534 52915540 NFIC JASPAR yes 82407402
chr12 52915552 52915557 SP1 TRANSFAC yes 82407403
chr12 52915555 52915576 ZNF263 JASPAR yes 82407404
chr12 52915585 52915604 PAX5 JASPAR yes 82407405
chr12 52915588 52915605 PAX1 JASPAR yes 82407406
chr12 52915588 52915605 PAX9 JASPAR yes 82407407
chr12 52915595 52915615 TP63 JASPAR yes 82407408
chr12 52915611 52915630 REST JASPAR yes 82407409
chr12 52915614 52915628 NR2F1 JASPAR yes 82407410
chr12 52915638 52915653 TFAP2C JASPAR yes 82407411
chr12 52915640 52915652 TFAP2B JASPAR yes 82407412
chr12 52915640 52915652 TFAP2C JASPAR yes 82407413
chr12 52915640 52915655 TFAP2A JASPAR yes 82407414
chr12 52915640 52915655 TFAP2C JASPAR yes 82407415
chr12 52915641 52915652 TFAP2A JASPAR yes 82407416
chr12 52915641 52915652 TFAP2B JASPAR yes 82407417
chr12 52915641 52915652 TFAP2C JASPAR yes 82407418
chr12 52915642 52915651 TFAP2A JASPAR yes 82407419
chr12 52915655 52915667 TEAD1 JASPAR yes 82407420
chr12 52915657 52915667 TEAD1 JASPAR yes 82407421
chr12 52915658 52915666 TEAD3 JASPAR yes 82407422
chr12 52915668 52915673 TFAP2A TRANSFAC yes 82407423
chr12 52915668 52915674 MZF1 JASPAR yes 82407424
chr12 52915672 52915678 YY1 JASPAR yes 82407425
chr12 52915674 52915688 TCF7L2 JASPAR yes 82407426
chr12 52915678 52915684 TCF1 TRANSFAC yes 82407427
chr12 52915678 52915685 TCF4 TRANSFAC yes 82407428
chr12 52915680 52915695 TFAP2A JASPAR yes 82407429
chr12 52915680 52915695 TFAP2C JASPAR yes 82407430
chr12 52915683 52915694 TFAP2A JASPAR yes 82407431
chr12 52915683 52915694 TFAP2B JASPAR yes 82407432
chr12 52915683 52915694 TFAP2C JASPAR yes 82407433
chr12 52915691 52915701 SP1 JASPAR yes 82407434
chr12 52915692 52915699 CEBPA TRANSFAC yes 82407435
SNP sites on vista13480[chr12:52915277-52915747]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 52915313 rs575671208 G C
NFATC2 NFATC3
2639562
chr12 52915400 rs139863285 TGCCAGCTGCTTTAGGGAGG T
MSC TLX1
2639563
chr12 52915400 rs372152833 TGCCAGCTGCTTTAGGGAGG T
MSC TLX1
2639564
chr12 52915432 rs73318304 C T no 2639565
chr12 52915555 rs576936247 G A
SP1 ZNF263
2639566
chr12 52915598 rs77748304 G A
PAX1 PAX5 PAX9 TP63
2639567
chr12 52915628 rs116568080 C T
NR2F1 REST
2639568
chr12 52915634 rs111380066 C T no 2639569
chr12 52915646 rs61135810 C T
TFAP2A TFAP2B TFAP2C
2639570
chr12 52915654 rs113372209 G C
TFAP2A TFAP2C
2639571
chr12 52915668 rs75978253 A G
MZF1 TFAP2A
2639572
chr12 52915678 rs73318305 C G
TCF1 TCF4 TCF7L2 YY1
2639573
chr12 52915745 rs73318306 G A no 2639574
Genes possibly regulated by vista13480[chr12:52915277-52915747]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 52817854 52828309 - KRT75 ENSG00000170454.5 52828309 1.0 1.0 12087 13032
chr12 52840435 52845910 - KRT6B ENSG00000185479.5 52845910 0.99 0.97 12088 30633
chr12 52862300 52867569 - KRT6C ENSG00000170465.9 52867569 0.96 0.93 12089 52292
chr12 52880958 52887041 - KRT6A ENSG00000205420.6 52887041 0.99 1.0 12090 71764
chr12 52908359 52914471 - KRT5 ENSG00000186081.7 52914471 0.99 0.99 12091 99194
chr12 52922915 52922980 + AC055736.1 ENSG00000268716.1 52922915 0.0 0.0 12092 92832
chr12 52937693 52946931 - KRT71 ENSG00000139648.6 52946931 0.98 0.0 12093 68816
chr12 52959566 52967609 - KRT74 ENSG00000170484.5 52967609 0.86 0.0 12094 48138
chr12 52979373 52995322 - KRT72 ENSG00000170486.6 52995322 0.98 0.98 12095 20425
chr12 53001354 53012343 - KRT73 ENSG00000186049.4 53012343 0.99 1.0 12096 3404
Expression level of Genes
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miRNAs possibly regulated by vista13480[chr12:52915277-52915747]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results