EnhancerDB
  1. Home
  2. Enhancers
  3. vista13499[chr12:53301815-53302147]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13499[chr12:53301815-53302147]
Back to top
Tissue distribution of vista13499
Back to top
Transcription factor that possibly regulate vista13499[chr12:53301815-53302147]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 53301913 53302225 CEBPB UCSC Txn Factor no Conserved 108034968
chr12 53301801 53301816 STAT1 JASPAR yes 82408432
chr12 53301801 53301816 STAT1 JASPAR yes 120962085
chr12 53301812 53301833 ZNF263 JASPAR yes 82408433
chr12 53301812 53301833 ZNF263 JASPAR yes 120962087
chr12 53301822 53301827 ETS2 TRANSFAC yes 82408434
chr12 53301822 53301827 ETS2 TRANSFAC yes 120962088
chr12 53301839 53301854 TFAP2A JASPAR yes 82408435
chr12 53301839 53301854 TFAP2A JASPAR yes 120962089
chr12 53301847 53301861 PLAG1 JASPAR yes 82408436
chr12 53301847 53301861 PLAG1 JASPAR yes 120962090
chr12 53301891 53301896 GATA2 JASPAR yes 82408437
chr12 53301891 53301896 GATA2 JASPAR yes 120962091
chr12 53301929 53301933 YY1 TRANSFAC yes 82408438
chr12 53301929 53301933 YY1 TRANSFAC yes 120962092
chr12 53301939 53301953 PLAG1 JASPAR yes 82408439
chr12 53301939 53301953 PLAG1 JASPAR yes 120962093
chr12 53301940 53301945 SP1 TRANSFAC yes 82408440
chr12 53301940 53301945 SP1 TRANSFAC yes 120962094
chr12 53301940 53301959 PAX5 JASPAR yes 82408441
chr12 53301940 53301959 PAX5 JASPAR yes 120962095
chr12 53301951 53301956 SP1 TRANSFAC yes 82408442
chr12 53301951 53301956 SP1 TRANSFAC yes 120962096
chr12 53301953 53301958 TFAP2A TRANSFAC yes 82408443
chr12 53301953 53301958 TFAP2A TRANSFAC yes 120962097
chr12 53301953 53301959 MZF1 JASPAR yes 82408444
chr12 53301953 53301959 MZF1 JASPAR yes 120962098
chr12 53301985 53302003 NR3C1 JASPAR yes 82408445
chr12 53301985 53302003 NR3C1 JASPAR yes 120962099
chr12 53301987 53301992 ETS2 TRANSFAC yes 82408446
chr12 53301987 53301992 ETS2 TRANSFAC yes 120962100
chr12 53301999 53302017 NR3C1 JASPAR yes 82408447
chr12 53301999 53302017 NR3C1 JASPAR yes 120962101
chr12 53302001 53302013 GRHL1 JASPAR yes 82408448
chr12 53302001 53302013 GRHL1 JASPAR yes 120962102
chr12 53302003 53302024 IRF1 JASPAR yes 82408449
chr12 53302003 53302024 IRF1 JASPAR yes 120962103
chr12 53302005 53302020 STAT2 JASPAR yes 82408450
chr12 53302005 53302020 STAT2 JASPAR yes 120962104
chr12 53302009 53302024 FOXP1 JASPAR yes 82408451
chr12 53302009 53302024 FOXP1 JASPAR yes 120962105
chr12 53302010 53302025 FOXP1 JASPAR yes 82408452
chr12 53302010 53302025 FOXP1 JASPAR yes 120962106
chr12 53302011 53302026 FOXP1 JASPAR yes 82408453
chr12 53302011 53302026 FOXP1 JASPAR yes 120962107
chr12 53302018 53302033 MEF2C JASPAR yes 82408454
chr12 53302018 53302033 MEF2C JASPAR yes 120962108
chr12 53302035 53302054 PAX5 JASPAR yes 82408455
chr12 53302035 53302054 PAX5 JASPAR yes 120962109
chr12 53302039 53302050 NFE2L2 JASPAR yes 82408456
chr12 53302039 53302050 NFE2L2 JASPAR yes 120962110
chr12 53302043 53302047 NFE TRANSFAC yes 82408457
chr12 53302043 53302047 NFE TRANSFAC yes 120962111
chr12 53302064 53302073 NF-IL6 TRANSFAC yes 82408458
chr12 53302064 53302073 NF-IL6 TRANSFAC yes 120962112
chr12 53302065 53302075 CEBPB JASPAR yes 82408459
chr12 53302065 53302075 CEBPD JASPAR yes 82408460
chr12 53302065 53302075 CEBPE JASPAR yes 82408461
chr12 53302065 53302075 CEBPG JASPAR yes 82408462
chr12 53302065 53302075 CEBPB JASPAR yes 120962113
chr12 53302065 53302075 CEBPD JASPAR yes 120962114
chr12 53302065 53302075 CEBPE JASPAR yes 120962115
chr12 53302065 53302075 CEBPG JASPAR yes 120962116
chr12 53302065 53302076 CEBPB JASPAR yes 82408463
chr12 53302065 53302076 CEBPB JASPAR yes 120962117
chr12 53302090 53302099 SP1 TRANSFAC yes 82408464
chr12 53302090 53302099 SP1 TRANSFAC yes 120962118
chr12 53302091 53302099 SP1 TRANSFAC yes 82408465
chr12 53302091 53302099 SP1 TRANSFAC yes 120962119
chr12 53302091 53302101 SP1 JASPAR yes 82408466
chr12 53302091 53302101 SP1 JASPAR yes 120962120
chr12 53302108 53302120 GRHL1 JASPAR yes 82408467
chr12 53302108 53302120 GRHL1 JASPAR yes 120962121
chr12 53302113 53302131 MAFF JASPAR yes 82408468
chr12 53302113 53302131 MAFF JASPAR yes 120962122
chr12 53302134 53302149 JUND JASPAR yes 82408469
chr12 53302134 53302149 JUND JASPAR yes 120962123
chr12 53302135 53302148 JUN JASPAR yes 82408470
chr12 53302135 53302148 JUN JASPAR yes 120962124
chr12 53302137 53302152 JUND JASPAR yes 82408471
chr12 53302137 53302152 JUND JASPAR yes 120962125
SNP sites on vista13499[chr12:53301815-53302147]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 53301950 rs140330931 G C
CEBPB PAX5 PLAG1
2643153
chr12 53302011 rs192628772 T G
CEBPB FOXP1 GRHL1 IRF1 NR3C1 STAT2
2643154
chr12 53302019 rs534531511 T C
CEBPB FOXP1 IRF1 MEF2C STAT2
2643155
chr12 53302033 rs117633742 G A
CEBPB MEF2C
2643156
chr12 53302071 rs188956949 G A
CEBPB CEBPD CEBPE CEBPG NF-IL6
2643157
chr12 53302094 rs78239275 C G,T
CEBPB SP1
2643158
Genes possibly regulated by vista13499[chr12:53301815-53302147]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 53200333 53208335 - KRT4 ENSG00000170477.8 53208335 1.0 0.93 12102 6520
chr12 53215194 53228079 - KRT79 ENSG00000185640.5 53228079 0.94 0.92 12103 26264
chr12 53231588 53242876 - KRT78 ENSG00000170423.8 53242876 1.0 0.99 12104 41061
chr12 53290977 53343738 - KRT8 ENSG00000170421.7 53343738 0.79 1.0 12105 58409
chr12 53342655 53346685 + KRT18 ENSG00000111057.6 53342655 0.78 0.99 12106 59492
chr12 53399942 53435993 + EIF4B ENSG00000063046.13 53399942 0.67 0.99 12107 2205
Expression level of Genes
Back to top
miRNAs possibly regulated by vista13499[chr12:53301815-53302147]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results