EnhancerDB
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Enhancers that have rs188956949[chr12:53302071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53295205 53311695 enh14734
Prostate (PC-3) Liver (HepG2) Large Intestine Astrocyte Placenta Peripheral Blood (MM.1S) Uterus Pancreas Neural Stem Cells (H9) Stomach
chr12 53301815 53302147 vista13499
VISTA
Transcript factors that have rs188956949[chr12:53302071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53301679 53302219 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034953
chr12 53301705 53302175 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034954
chr12 53301742 53302146 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034955
chr12 53301750 53302320 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034956
chr12 53301762 53302138 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034957
chr12 53301769 53302139 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034958
chr12 53301770 53302426 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034959
chr12 53301771 53302311 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034960
chr12 53301772 53302248 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034961
chr12 53301862 53302318 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034962
chr12 53301878 53302342 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108034963
chr12 53301895 53302371 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034964
chr12 53301908 53302378 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108034965
chr12 53301911 53302367 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034966
chr12 53301913 53302137 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21548136
chr12 53301913 53302137 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034967
chr12 53301913 53302225 CEBPB UCSC Txn Factor no Conserved 108034968
chr12 53301938 53302278 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034969
chr12 53301959 53302303 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034970
chr12 53301961 53302291 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034971
chr12 53301962 53302238 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21548137
chr12 53301962 53302238 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034972
chr12 53301978 53302225 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034973
chr12 53301993 53302273 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034974
chr12 53301995 53302133 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108034975
chr12 53302007 53302237 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034976
chr12 53302008 53302298 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21548138
chr12 53302008 53302298 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034977
chr12 53302013 53302389 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034978
chr12 53302014 53302290 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21548139
chr12 53302014 53302290 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108034979
chr12 53302014 53302334 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034980
chr12 53302031 53302124 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108034981
chr12 53302064 53302073 NF-IL6 TRANSFAC yes 82408458
chr12 53302064 53302073 NF-IL6 TRANSFAC yes 120962112
chr12 53302065 53302075 CEBPB JASPAR yes 82408459
chr12 53302065 53302075 CEBPD JASPAR yes 82408460
chr12 53302065 53302075 CEBPE JASPAR yes 82408461
chr12 53302065 53302075 CEBPG JASPAR yes 82408462
chr12 53302065 53302075 CEBPB JASPAR yes 120962113
chr12 53302065 53302075 CEBPD JASPAR yes 120962114
chr12 53302065 53302075 CEBPE JASPAR yes 120962115
chr12 53302065 53302075 CEBPG JASPAR yes 120962116
chr12 53302065 53302076 CEBPB JASPAR yes 82408463
chr12 53302065 53302076 CEBPB JASPAR yes 120962117
Genes associated with rs188956949[chr12:53302071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More