EnhancerDB
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  3. vista1350[chr1:42204580-42205516]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1350[chr1:42204580-42205516]
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Tissue distribution of vista1350
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Transcription factor that possibly regulate vista1350[chr1:42204580-42205516]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42204598 42204615 PAX1 JASPAR yes 28415730
chr1 42204598 42204615 PAX9 JASPAR yes 28415731
chr1 42204598 42204615 PAX1 JASPAR yes 118279626
chr1 42204598 42204615 PAX9 JASPAR yes 118279627
chr1 42204605 42204623 E2F3 JASPAR yes 28415732
chr1 42204605 42204623 E2F3 JASPAR yes 118279628
chr1 42204608 42204620 E2F1 JASPAR yes 28415733
chr1 42204608 42204620 E2F1 JASPAR yes 118279629
chr1 42204616 42204620 YY1 TRANSFAC yes 28415734
chr1 42204616 42204620 YY1 TRANSFAC yes 118279630
chr1 42204620 42204629 RUNX2 JASPAR yes 28415735
chr1 42204620 42204629 RUNX2 JASPAR yes 118279631
chr1 42204620 42204630 RUNX3 JASPAR yes 28415736
chr1 42204620 42204630 RUNX3 JASPAR yes 118279632
chr1 42204629 42204633 YY1 TRANSFAC yes 28415737
chr1 42204629 42204633 YY1 TRANSFAC yes 118279633
chr1 42204642 42204656 BATF3 JASPAR yes 28415738
chr1 42204642 42204656 BATF3 JASPAR yes 118279634
chr1 42204663 42204678 AR JASPAR yes 28415739
chr1 42204663 42204678 AR JASPAR yes 118279635
chr1 42204672 42204683 STAT3 JASPAR yes 28415740
chr1 42204672 42204683 STAT3 JASPAR yes 118279636
chr1 42204693 42204703 ELK1 JASPAR yes 28415741
chr1 42204693 42204703 ELK1 JASPAR yes 118279637
chr1 42204695 42204705 ELK1 JASPAR yes 28415742
chr1 42204695 42204705 ELK3 JASPAR yes 28415743
chr1 42204695 42204705 ERF JASPAR yes 28415744
chr1 42204695 42204705 ERG JASPAR yes 28415745
chr1 42204695 42204705 ETV1 JASPAR yes 28415746
chr1 42204695 42204705 ETV4 JASPAR yes 28415747
chr1 42204695 42204705 ETV5 JASPAR yes 28415748
chr1 42204695 42204705 FEV JASPAR yes 28415749
chr1 42204695 42204705 FLI1 JASPAR yes 28415750
chr1 42204695 42204705 GABPA JASPAR yes 28415751
chr1 42204695 42204705 ELK1 JASPAR yes 118279638
chr1 42204695 42204705 ELK3 JASPAR yes 118279639
chr1 42204695 42204705 ERF JASPAR yes 118279640
chr1 42204695 42204705 ERG JASPAR yes 118279641
chr1 42204695 42204705 ETV1 JASPAR yes 118279642
chr1 42204695 42204705 ETV4 JASPAR yes 118279643
chr1 42204695 42204705 ETV5 JASPAR yes 118279644
chr1 42204695 42204705 FEV JASPAR yes 118279645
chr1 42204695 42204705 FLI1 JASPAR yes 118279646
chr1 42204695 42204705 GABPA JASPAR yes 118279647
chr1 42204697 42204703 ETS1 JASPAR yes 28415752
chr1 42204697 42204703 SPI1 JASPAR yes 28415753
chr1 42204697 42204703 ETS1 JASPAR yes 118279648
chr1 42204697 42204703 SPI1 JASPAR yes 118279649
chr1 42204716 42204730 ZIC1 JASPAR yes 28415754
chr1 42204716 42204730 ZIC1 JASPAR yes 118279650
chr1 42204716 42204731 ZIC3 JASPAR yes 28415755
chr1 42204716 42204731 ZIC4 JASPAR yes 28415756
chr1 42204716 42204731 ZIC3 JASPAR yes 118279651
chr1 42204716 42204731 ZIC4 JASPAR yes 118279652
chr1 42204736 42204742 PEA3 TRANSFAC yes 28415757
chr1 42204736 42204742 PEA3 TRANSFAC yes 118279653
chr1 42204743 42204763 TP53 JASPAR yes 28415758
chr1 42204743 42204763 TP53 JASPAR yes 118279654
chr1 42204745 42204751 HiNF-A TRANSFAC yes 28415759
chr1 42204745 42204751 HiNF-A TRANSFAC yes 118279655
chr1 42204750 42204765 MEF2C JASPAR yes 28415760
chr1 42204750 42204765 MEF2C JASPAR yes 118279656
chr1 42204751 42204766 MEF2A JASPAR yes 28415761
chr1 42204751 42204766 MEF2A JASPAR yes 118279657
chr1 42204752 42204764 MEF2D JASPAR yes 28415762
chr1 42204752 42204764 MEF2D JASPAR yes 118279658
chr1 42204815 42204826 NRF1 JASPAR yes 28415763
chr1 42204815 42204826 NRF1 JASPAR yes 118279659
chr1 42204824 42204839 NR2C2 JASPAR yes 28415764
chr1 42204824 42204839 NR2C2 JASPAR yes 118279660
chr1 42204830 42204836 NFE2 TRANSFAC yes 28415765
chr1 42204830 42204836 NFE2 TRANSFAC yes 118279661
chr1 42204836 42204851 RFX5 JASPAR yes 28415766
chr1 42204836 42204851 RFX5 JASPAR yes 118279662
chr1 42204856 42204866 NFKB1 JASPAR yes 28415767
chr1 42204856 42204866 RELA JASPAR yes 28415768
chr1 42204856 42204866 REL JASPAR yes 28415769
chr1 42204856 42204866 NFKB1 JASPAR yes 118279663
chr1 42204856 42204866 RELA JASPAR yes 118279664
chr1 42204856 42204866 REL JASPAR yes 118279665
chr1 42204856 42204867 NFKB1 JASPAR yes 28415770
chr1 42204856 42204867 NFKB1 JASPAR yes 118279666
chr1 42204859 42204874 STAT1 JASPAR yes 28415771
chr1 42204859 42204874 STAT1 JASPAR yes 118279667
chr1 42204861 42204867 ETS1 JASPAR yes 28415772
chr1 42204861 42204867 ETS1 JASPAR yes 118279668
chr1 42204863 42204872 THAP1 JASPAR yes 28415773
chr1 42204863 42204872 THAP1 JASPAR yes 118279669
chr1 42204866 42204870 LFA1 TRANSFAC yes 28415774
chr1 42204866 42204870 LFA1 TRANSFAC yes 118279670
chr1 42204882 42204887 H4TF1 TRANSFAC yes 28415775
chr1 42204882 42204887 H4TF1 TRANSFAC yes 118279671
chr1 42204882 42204893 CEBPB JASPAR yes 28415776
chr1 42204882 42204893 CEBPB JASPAR yes 118279672
chr1 42204882 42204895 ATF4 JASPAR yes 28415777
chr1 42204882 42204895 ATF4 JASPAR yes 118279673
chr1 42204883 42204894 CEBPA JASPAR yes 28415778
chr1 42204883 42204894 CEBPA JASPAR yes 118279674
chr1 42204900 42204913 NR2F1 JASPAR yes 28415779
chr1 42204900 42204913 NR2F1 JASPAR yes 118279675
chr1 42204902 42204910 NR4A2 JASPAR yes 28415780
chr1 42204902 42204910 NR4A2 JASPAR yes 118279676
chr1 42204904 42204908 ESR1 TRANSFAC yes 28415781
chr1 42204904 42204908 ESR1 TRANSFAC yes 118279677
chr1 42204904 42204914 MAX JASPAR yes 28415782
chr1 42204904 42204914 MAX JASPAR yes 118279678
chr1 42204904 42204915 USF1 JASPAR yes 28415783
chr1 42204904 42204915 USF2 JASPAR yes 28415784
chr1 42204904 42204915 USF1 JASPAR yes 118279679
chr1 42204904 42204915 USF2 JASPAR yes 118279680
chr1 42204905 42204915 BHLHE40 JASPAR yes 28415785
chr1 42204905 42204915 BHLHE41 JASPAR yes 28415786
chr1 42204905 42204915 HEY1 JASPAR yes 28415787
chr1 42204905 42204915 HEY2 JASPAR yes 28415788
chr1 42204905 42204915 MLXIPL JASPAR yes 28415789
chr1 42204905 42204915 MLX JASPAR yes 28415790
chr1 42204905 42204915 MNT JASPAR yes 28415791
chr1 42204905 42204915 TFE3 JASPAR yes 28415792
chr1 42204905 42204915 BHLHE40 JASPAR yes 118279681
chr1 42204905 42204915 BHLHE41 JASPAR yes 118279682
chr1 42204905 42204915 HEY1 JASPAR yes 118279683
chr1 42204905 42204915 HEY2 JASPAR yes 118279684
chr1 42204905 42204915 MLXIPL JASPAR yes 118279685
chr1 42204905 42204915 MLX JASPAR yes 118279686
chr1 42204905 42204915 MNT JASPAR yes 118279687
chr1 42204905 42204915 TFE3 JASPAR yes 118279688
chr1 42204907 42204912 MYC TRANSFAC yes 28415793
chr1 42204907 42204912 USF1 TRANSFAC yes 28415794
chr1 42204907 42204912 USF2 TRANSFAC yes 28415795
chr1 42204907 42204912 MYC TRANSFAC yes 118279689
chr1 42204907 42204912 USF1 TRANSFAC yes 118279690
chr1 42204907 42204912 USF2 TRANSFAC yes 118279691
chr1 42204930 42204944 SPI1 JASPAR yes 28415796
chr1 42204930 42204944 SPI1 JASPAR yes 118279692
chr1 42204935 42204946 NFKB1 JASPAR yes 28415797
chr1 42204935 42204946 NFKB1 JASPAR yes 118279693
chr1 42204936 42204946 RELA JASPAR yes 28415798
chr1 42204936 42204946 RELA JASPAR yes 118279694
chr1 42204943 42204950 ETS1 TRANSFAC yes 28415799
chr1 42204943 42204950 ETS1 TRANSFAC yes 118279695
chr1 42204984 42204988 LFA1 TRANSFAC yes 28415800
chr1 42204984 42204988 LFA1 TRANSFAC yes 118279696
chr1 42204987 42204991 YY1 TRANSFAC yes 28415801
chr1 42204987 42204991 YY1 TRANSFAC yes 118279697
chr1 42205001 42205016 JUND JASPAR yes 28415802
chr1 42205001 42205016 JUND JASPAR yes 118279698
chr1 42205002 42205015 JUN JASPAR yes 28415803
chr1 42205002 42205015 JUN JASPAR yes 118279699
chr1 42205005 42205018 NR2F1 JASPAR yes 28415804
chr1 42205005 42205018 NR2F1 JASPAR yes 118279700
chr1 42205006 42205014 CREB1 JASPAR yes 28415805
chr1 42205006 42205014 CREB1 JASPAR yes 118279701
chr1 42205007 42205025 RARA JASPAR yes 28415806
chr1 42205007 42205025 RARA JASPAR yes 118279702
chr1 42205009 42205013 ESR1 TRANSFAC yes 28415807
chr1 42205009 42205013 ESR1 TRANSFAC yes 118279703
chr1 42205038 42205041 MYB TRANSFAC yes 28415808
chr1 42205038 42205041 MYB TRANSFAC yes 118279704
chr1 42205048 42205059 E2F6 JASPAR yes 28415809
chr1 42205048 42205059 E2F6 JASPAR yes 118279705
chr1 42205063 42205077 RORA JASPAR yes 28415810
chr1 42205063 42205077 RORA JASPAR yes 118279706
chr1 42205069 42205075 ESR1 TRANSFAC yes 28415811
chr1 42205069 42205075 ESR1 TRANSFAC yes 118279707
chr1 42205071 42205075 ESR1 TRANSFAC yes 28415812
chr1 42205071 42205075 ESR1 TRANSFAC yes 118279708
chr1 42205090 42205097 SPIB JASPAR yes 28415813
chr1 42205090 42205097 SPIB JASPAR yes 118279709
chr1 42205092 42205107 AR JASPAR yes 28415814
chr1 42205092 42205107 AR JASPAR yes 118279710
chr1 42205101 42205109 MEIS2 JASPAR yes 28415815
chr1 42205101 42205109 MEIS3 JASPAR yes 28415816
chr1 42205101 42205109 MEIS2 JASPAR yes 118279711
chr1 42205101 42205109 MEIS3 JASPAR yes 118279712
chr1 42205118 42205129 USF1 JASPAR yes 28415817
chr1 42205118 42205129 USF1 JASPAR yes 118279713
chr1 42205124 42205140 GLIS1 JASPAR yes 28415818
chr1 42205124 42205140 GLIS1 JASPAR yes 118279714
chr1 42205125 42205139 ZIC1 JASPAR yes 28415819
chr1 42205125 42205139 ZIC1 JASPAR yes 118279715
chr1 42205125 42205140 ZIC4 JASPAR yes 28415820
chr1 42205125 42205140 ZIC4 JASPAR yes 118279716
chr1 42205126 42205138 ZBTB7A JASPAR yes 28415821
chr1 42205126 42205138 ZBTB7A JASPAR yes 118279717
chr1 42205127 42205132 SP1 TRANSFAC yes 28415822
chr1 42205127 42205132 SP1 TRANSFAC yes 118279718
chr1 42205127 42205142 RUNX2 JASPAR yes 28415823
chr1 42205127 42205142 RUNX2 JASPAR yes 118279719
chr1 42205128 42205144 ZNF143 JASPAR yes 28415824
chr1 42205128 42205144 ZNF143 JASPAR yes 118279720
chr1 42205140 42205149 HIC2 JASPAR yes 28415825
chr1 42205140 42205149 HIC2 JASPAR yes 118279721
chr1 42205143 42205147 LFA1 TRANSFAC yes 28415826
chr1 42205143 42205147 LFA1 TRANSFAC yes 118279722
chr1 42205169 42205184 AR JASPAR yes 28415827
chr1 42205169 42205184 AR JASPAR yes 118279723
chr1 42205186 42205192 MAZ TRANSFAC yes 28415828
chr1 42205186 42205192 MAZ TRANSFAC yes 118279724
chr1 42205187 42205201 JUN JASPAR yes 28415829
chr1 42205187 42205201 JUN JASPAR yes 118279725
chr1 42205190 42205201 FOSL2 JASPAR yes 28415830
chr1 42205190 42205201 JUNB JASPAR yes 28415831
chr1 42205190 42205201 FOSL2 JASPAR yes 118279726
chr1 42205190 42205201 JUNB JASPAR yes 118279727
chr1 42205191 42205199 FOXC1 JASPAR yes 28415832
chr1 42205191 42205199 FOXC1 JASPAR yes 118279728
chr1 42205191 42205202 FOSL1 JASPAR yes 28415833
chr1 42205191 42205202 JUND JASPAR yes 28415834
chr1 42205191 42205202 FOSL1 JASPAR yes 118279729
chr1 42205191 42205202 JUND JASPAR yes 118279730
chr1 42205193 42205199 JUN TRANSFAC yes 28415835
chr1 42205193 42205199 JUN TRANSFAC yes 118279731
chr1 42205239 42205252 NFKB2 JASPAR yes 28415836
chr1 42205239 42205252 NFKB2 JASPAR yes 118279732
chr1 42205245 42205266 ZNF263 JASPAR yes 28415837
chr1 42205245 42205266 ZNF263 JASPAR yes 118279733
chr1 42205246 42205267 ZNF263 JASPAR yes 28415838
chr1 42205246 42205267 ZNF263 JASPAR yes 118279734
chr1 42205248 42205258 SP1 JASPAR yes 28415839
chr1 42205248 42205258 SP1 JASPAR yes 118279735
chr1 42205249 42205270 ZNF263 JASPAR yes 28415840
chr1 42205249 42205270 ZNF263 JASPAR yes 118279736
chr1 42205250 42205260 ZNF740 JASPAR yes 28415841
chr1 42205250 42205260 ZNF740 JASPAR yes 118279737
chr1 42205272 42205277 ETS2 TRANSFAC yes 28415842
chr1 42205272 42205277 ETS2 TRANSFAC yes 118279738
chr1 42205272 42205280 FEV JASPAR yes 28415843
chr1 42205272 42205280 FEV JASPAR yes 118279739
chr1 42205273 42205280 SPI1 JASPAR yes 28415844
chr1 42205273 42205280 SPI1 JASPAR yes 118279740
chr1 42205330 42205333 MYB TRANSFAC yes 28415845
chr1 42205330 42205333 MYB TRANSFAC yes 118279741
chr1 42205351 42205363 INSM1 JASPAR yes 28415846
chr1 42205351 42205363 INSM1 JASPAR yes 118279742
chr1 42205390 42205393 MYB TRANSFAC yes 28415847
chr1 42205390 42205393 MYB TRANSFAC yes 118279743
chr1 42205407 42205427 PPARG JASPAR yes 28415848
chr1 42205407 42205427 PPARG JASPAR yes 118279744
chr1 42205417 42205426 HIC2 JASPAR yes 28415849
chr1 42205417 42205426 HIC2 JASPAR yes 118279745
chr1 42205420 42205430 NKX2-3 JASPAR yes 28415850
chr1 42205420 42205430 NKX2-3 JASPAR yes 118279746
chr1 42205421 42205430 NKX2-8 JASPAR yes 28415851
chr1 42205421 42205430 NKX2-8 JASPAR yes 118279747
chr1 42205457 42205467 TFE3 JASPAR yes 28415852
chr1 42205457 42205467 TFEB JASPAR yes 28415853
chr1 42205457 42205467 TFE3 JASPAR yes 118279748
chr1 42205457 42205467 TFEB JASPAR yes 118279749
chr1 42205457 42205468 USF1 JASPAR yes 28415854
chr1 42205457 42205468 USF2 JASPAR yes 28415855
chr1 42205457 42205468 USF1 JASPAR yes 118279750
chr1 42205457 42205468 USF2 JASPAR yes 118279751
chr1 42205458 42205468 MAX JASPAR yes 28415856
chr1 42205458 42205468 MAX JASPAR yes 118279752
chr1 42205479 42205494 HNF4A JASPAR yes 28415857
chr1 42205479 42205494 HNF4A JASPAR yes 118279753
chr1 42205495 42205499 NFE TRANSFAC yes 28415858
chr1 42205495 42205499 NFE TRANSFAC yes 118279754
chr1 42205495 42205508 SMAD2 JASPAR yes 28415859
chr1 42205495 42205508 SMAD2 JASPAR yes 118279755
chr1 42205503 42205524 ZNF263 JASPAR yes 28415860
chr1 42205503 42205524 ZNF263 JASPAR yes 118279756
chr1 42205509 42205515 MZF1 JASPAR yes 28415861
chr1 42205509 42205515 MZF1 JASPAR yes 118279757
SNP sites on vista1350[chr1:42204580-42205516]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42204716 rs578145608 C T
ZIC1 ZIC3 ZIC4
264209
chr1 42204752 rs140424211 G A
MEF2A MEF2C MEF2D TP53
264210
chr1 42204969 rs190322328 A C no 264211
chr1 42205021 rs56329272 C A
RARA
264212
chr1 42205299 rs562969777 T G no 264213
Genes possibly regulated by vista1350[chr1:42204580-42205516]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1350[chr1:42204580-42205516]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results