EnhancerDB
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  3. rs578145608[chr1:42204716]
Enhancers that have rs578145608[chr1:42204716]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
chr1 42204580 42205516 vista1350
VISTA
Transcript factors that have rs578145608[chr1:42204716]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42204317 42204853 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21325360
chr1 42204317 42204853 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802972
chr1 42204317 42204853 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802973
chr1 42204716 42204730 ZIC1 JASPAR yes 28415754
chr1 42204716 42204730 ZIC1 JASPAR yes 118279650
chr1 42204716 42204731 ZIC3 JASPAR yes 28415755
chr1 42204716 42204731 ZIC4 JASPAR yes 28415756
chr1 42204716 42204731 ZIC3 JASPAR yes 118279651
chr1 42204716 42204731 ZIC4 JASPAR yes 118279652
Genes associated with rs578145608[chr1:42204716], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More