EnhancerDB
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  3. vista1352[chr1:42217644-42218002]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1352[chr1:42217644-42218002]
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Tissue distribution of vista1352
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Transcription factor that possibly regulate vista1352[chr1:42217644-42218002]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42217647 42217651 YY1 TRANSFAC yes 28417465
chr1 42217647 42217651 YY1 TRANSFAC yes 118279829
chr1 42217650 42217671 ZNF263 JASPAR yes 28417466
chr1 42217650 42217671 ZNF263 JASPAR yes 118279830
chr1 42217653 42217674 ZNF263 JASPAR yes 28417467
chr1 42217653 42217674 ZNF263 JASPAR yes 118279831
chr1 42217668 42217678 MEF2A JASPAR yes 28417468
chr1 42217668 42217678 MEF2A JASPAR yes 118279832
chr1 42217686 42217691 TFAP2A TRANSFAC yes 28417469
chr1 42217686 42217691 TFAP2A TRANSFAC yes 118279833
chr1 42217686 42217692 MZF1 JASPAR yes 28417470
chr1 42217686 42217692 MZF1 JASPAR yes 118279834
chr1 42217690 42217708 RARA JASPAR yes 28417471
chr1 42217690 42217708 RARA JASPAR yes 118279835
chr1 42217715 42217728 JUN JASPAR yes 28417472
chr1 42217715 42217728 JUN JASPAR yes 118279836
chr1 42217728 42217741 EOMES JASPAR yes 28417473
chr1 42217728 42217741 EOMES JASPAR yes 118279837
chr1 42217729 42217737 MGA JASPAR yes 28417474
chr1 42217729 42217737 TBX15 JASPAR yes 28417475
chr1 42217729 42217737 TBX1 JASPAR yes 28417476
chr1 42217729 42217737 TBX4 JASPAR yes 28417477
chr1 42217729 42217737 TBX5 JASPAR yes 28417478
chr1 42217729 42217737 MGA JASPAR yes 118279838
chr1 42217729 42217737 TBX15 JASPAR yes 118279839
chr1 42217729 42217737 TBX1 JASPAR yes 118279840
chr1 42217729 42217737 TBX4 JASPAR yes 118279841
chr1 42217729 42217737 TBX5 JASPAR yes 118279842
chr1 42217730 42217742 IRF1 JASPAR yes 28417479
chr1 42217730 42217742 IRF1 JASPAR yes 118279843
chr1 42217732 42217743 ESRRB JASPAR yes 28417480
chr1 42217732 42217743 ESRRB JASPAR yes 118279844
chr1 42217751 42217772 ZNF263 JASPAR yes 28417481
chr1 42217751 42217772 ZNF263 JASPAR yes 118279845
chr1 42217792 42217813 IRF1 JASPAR yes 28417482
chr1 42217792 42217813 IRF1 JASPAR yes 118279846
chr1 42217807 42217812 H4TF1 TRANSFAC yes 28417483
chr1 42217807 42217812 H4TF1 TRANSFAC yes 118279847
chr1 42217809 42217815 ETS1 JASPAR yes 28417484
chr1 42217809 42217815 ETS1 JASPAR yes 118279848
chr1 42217823 42217838 JUND JASPAR yes 28417485
chr1 42217823 42217838 JUND JASPAR yes 118279849
chr1 42217824 42217837 DUXA JASPAR yes 28417486
chr1 42217824 42217837 DUXA JASPAR yes 118279850
chr1 42217825 42217839 ATF7 JASPAR yes 28417487
chr1 42217825 42217839 BATF3 JASPAR yes 28417488
chr1 42217825 42217839 ATF7 JASPAR yes 118279851
chr1 42217825 42217839 BATF3 JASPAR yes 118279852
chr1 42217826 42217838 JDP2 JASPAR yes 28417489
chr1 42217826 42217838 JDP2 JASPAR yes 118279853
chr1 42217827 42217840 JUN JASPAR yes 28417490
chr1 42217827 42217840 JUN JASPAR yes 118279854
chr1 42217828 42217835 JUN TRANSFAC yes 28417491
chr1 42217828 42217835 JUN TRANSFAC yes 118279855
chr1 42217846 42217859 ELF1 JASPAR yes 28417492
chr1 42217846 42217859 ELF1 JASPAR yes 118279856
chr1 42217849 42217856 SPIB JASPAR yes 28417493
chr1 42217849 42217856 SPIB JASPAR yes 118279857
chr1 42217849 42217859 ETV6 JASPAR yes 28417494
chr1 42217849 42217859 GABPA JASPAR yes 28417495
chr1 42217849 42217859 ETV6 JASPAR yes 118279858
chr1 42217849 42217859 GABPA JASPAR yes 118279859
chr1 42217849 42217860 ELK4 JASPAR yes 28417496
chr1 42217849 42217860 FLI1 JASPAR yes 28417497
chr1 42217849 42217860 ELK4 JASPAR yes 118279860
chr1 42217849 42217860 FLI1 JASPAR yes 118279861
chr1 42217850 42217858 EHF JASPAR yes 28417498
chr1 42217850 42217858 EHF JASPAR yes 118279862
chr1 42217851 42217858 SPI1 JASPAR yes 28417499
chr1 42217851 42217858 SPI1 JASPAR yes 118279863
chr1 42217851 42217866 PRDM1 JASPAR yes 28417500
chr1 42217851 42217866 PRDM1 JASPAR yes 118279864
chr1 42217853 42217874 IRF1 JASPAR yes 28417501
chr1 42217853 42217874 IRF1 JASPAR yes 118279865
chr1 42217885 42217900 RUNX2 JASPAR yes 28417502
chr1 42217885 42217900 RUNX2 JASPAR yes 118279866
chr1 42217886 42217895 RUNX2 JASPAR yes 28417503
chr1 42217886 42217895 RUNX2 JASPAR yes 118279867
chr1 42217886 42217896 RUNX3 JASPAR yes 28417504
chr1 42217886 42217896 RUNX3 JASPAR yes 118279868
chr1 42217893 42217906 NR2F1 JASPAR yes 28417505
chr1 42217893 42217906 NR2F1 JASPAR yes 118279869
chr1 42217896 42217904 NR4A2 JASPAR yes 28417506
chr1 42217896 42217904 NR4A2 JASPAR yes 118279870
chr1 42217896 42217911 HNF4A JASPAR yes 28417507
chr1 42217896 42217911 HNF4A JASPAR yes 118279871
chr1 42217897 42217912 HNF4G JASPAR yes 28417508
chr1 42217897 42217912 HNF4G JASPAR yes 118279872
chr1 42217909 42217930 REST JASPAR yes 28417509
chr1 42217909 42217930 REST JASPAR yes 118279873
chr1 42217916 42217934 MAFF JASPAR yes 28417510
chr1 42217916 42217934 MAFF JASPAR yes 118279874
chr1 42217917 42217932 MAFK JASPAR yes 28417511
chr1 42217917 42217932 MAFK JASPAR yes 118279875
chr1 42217920 42217924 ESR1 TRANSFAC yes 28417512
chr1 42217920 42217924 ESR1 TRANSFAC yes 118279876
chr1 42217921 42217932 NRL JASPAR yes 28417513
chr1 42217921 42217932 NRL JASPAR yes 118279877
chr1 42217984 42217989 TFAP2A TRANSFAC yes 28417514
chr1 42217984 42217989 TFAP2A TRANSFAC yes 118279878
chr1 42217984 42217990 MZF1 JASPAR yes 28417515
chr1 42217984 42217990 MZF1 JASPAR yes 118279879
chr1 42218001 42218015 TLX1 JASPAR yes 28417516
chr1 42218001 42218015 TLX1 JASPAR yes 118279880
chr1 42218002 42218016 TLX1 JASPAR yes 28417517
chr1 42218002 42218016 TLX1 JASPAR yes 118279881
SNP sites on vista1352[chr1:42217644-42218002]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42217694 rs11210520 G A
RARA
264365
chr1 42217717 rs115582379 T C
JUN
264366
chr1 42217814 rs566179763 C T
ETS1
264367
chr1 42217845 rs74975444 C T no 264368
chr1 42217907 rs4660567 T C
HNF4A HNF4G
264369
chr1 42217930 rs78151068 A C
MAFF MAFK NRL REST
264370
chr1 42217933 rs78048981 T C
MAFF
264371
Genes possibly regulated by vista1352[chr1:42217644-42218002]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1352[chr1:42217644-42218002]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results