EnhancerDB
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Enhancers that have rs4660567[chr1:42217907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 42217644 42218002 vista1352
VISTA
Transcript factors that have rs4660567[chr1:42217907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42217664 42218074 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802975
chr1 42217896 42217911 HNF4A JASPAR yes 28417507
chr1 42217896 42217911 HNF4A JASPAR yes 118279871
chr1 42217897 42217912 HNF4G JASPAR yes 28417508
chr1 42217897 42217912 HNF4G JASPAR yes 118279872
Genes associated with rs4660567[chr1:42217907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More