EnhancerDB
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  3. vista13531[chr12:53955466-53955638]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13531[chr12:53955466-53955638]
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Tissue distribution of vista13531
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Transcription factor that possibly regulate vista13531[chr12:53955466-53955638]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 53955367 53955750 FOSL2 UCSC Txn Factor no Conserved 108036213
chr12 53955378 53955736 JUN UCSC Txn Factor no Conserved 108036216
chr12 53955412 53955699 JUND UCSC Txn Factor no Conserved 108036221
chr12 53955415 53955699 FOS UCSC Txn Factor no Conserved 108036223
chr12 53955425 53955734 TCF12 UCSC Txn Factor no Conserved 108036227
chr12 53955471 53955484 ZBTB18 JASPAR yes 82410023
chr12 53955471 53955484 ZBTB18 JASPAR yes 120990977
chr12 53955479 53955487 FOXO3 JASPAR yes 82410024
chr12 53955479 53955487 FOXO3 JASPAR yes 120990978
chr12 53955481 53955497 NFYA JASPAR yes 82410025
chr12 53955481 53955497 NFYA JASPAR yes 120990979
chr12 53955485 53955502 ZNF410 JASPAR yes 82410026
chr12 53955485 53955502 ZNF410 JASPAR yes 120990980
chr12 53955486 53955490 H1TF2 TRANSFAC yes 82410027
chr12 53955486 53955490 NFE TRANSFAC yes 82410028
chr12 53955486 53955490 SRF TRANSFAC yes 82410029
chr12 53955486 53955490 H1TF2 TRANSFAC yes 120990981
chr12 53955486 53955490 NFE TRANSFAC yes 120990982
chr12 53955486 53955490 SRF TRANSFAC yes 120990983
chr12 53955494 53955508 ONECUT3 JASPAR yes 82410030
chr12 53955494 53955508 ONECUT3 JASPAR yes 120990984
chr12 53955497 53955509 FOXI1 JASPAR yes 82410031
chr12 53955497 53955509 FOXI1 JASPAR yes 120990985
chr12 53955498 53955512 ONECUT2 JASPAR yes 82410032
chr12 53955498 53955512 ONECUT3 JASPAR yes 82410033
chr12 53955498 53955512 ONECUT2 JASPAR yes 120990986
chr12 53955498 53955512 ONECUT3 JASPAR yes 120990987
chr12 53955498 53955513 FOXP1 JASPAR yes 82410034
chr12 53955498 53955513 HNF1A JASPAR yes 82410035
chr12 53955498 53955513 FOXP1 JASPAR yes 120990988
chr12 53955498 53955513 HNF1A JASPAR yes 120990989
chr12 53955498 53955519 IRF1 JASPAR yes 82410036
chr12 53955498 53955519 IRF1 JASPAR yes 120990990
chr12 53955499 53955513 POU4F1 JASPAR yes 82410037
chr12 53955499 53955513 POU4F1 JASPAR yes 120990991
chr12 53955499 53955514 FOXA1 JASPAR yes 82410038
chr12 53955499 53955514 FOXA1 JASPAR yes 120990992
chr12 53955500 53955511 FOXB1 JASPAR yes 82410039
chr12 53955500 53955511 FOXC1 JASPAR yes 82410040
chr12 53955500 53955511 PROP1 JASPAR yes 82410041
chr12 53955500 53955511 FOXB1 JASPAR yes 120990993
chr12 53955500 53955511 FOXC1 JASPAR yes 120990994
chr12 53955500 53955511 PROP1 JASPAR yes 120990995
chr12 53955500 53955512 FOXC2 JASPAR yes 82410042
chr12 53955500 53955512 FOXC2 JASPAR yes 120990996
chr12 53955501 53955513 FOXI1 JASPAR yes 82410043
chr12 53955501 53955513 FOXI1 JASPAR yes 120990997
chr12 53955504 53955525 IRF1 JASPAR yes 82410044
chr12 53955504 53955525 IRF1 JASPAR yes 120990998
chr12 53955509 53955524 FOXP1 JASPAR yes 82410045
chr12 53955509 53955524 FOXP1 JASPAR yes 120990999
chr12 53955511 53955516 ETS2 TRANSFAC yes 82410046
chr12 53955511 53955516 ETS2 TRANSFAC yes 120991000
chr12 53955531 53955542 FOXA1 JASPAR yes 82410047
chr12 53955531 53955542 FOXA1 JASPAR yes 120991001
chr12 53955536 53955550 JUN JASPAR yes 82410048
chr12 53955536 53955550 JUN JASPAR yes 120991002
chr12 53955539 53955550 FOSL2 JASPAR yes 82410049
chr12 53955539 53955550 JUNB JASPAR yes 82410050
chr12 53955539 53955550 FOSL2 JASPAR yes 120991003
chr12 53955539 53955550 JUNB JASPAR yes 120991004
chr12 53955540 53955551 FOS JASPAR yes 82410051
chr12 53955540 53955551 FOSL1 JASPAR yes 82410052
chr12 53955540 53955551 JUND JASPAR yes 82410053
chr12 53955540 53955551 NFE2 JASPAR yes 82410054
chr12 53955540 53955551 FOS JASPAR yes 120991005
chr12 53955540 53955551 FOSL1 JASPAR yes 120991006
chr12 53955540 53955551 JUND JASPAR yes 120991007
chr12 53955540 53955551 NFE2 JASPAR yes 120991008
chr12 53955541 53955550 JDP2 JASPAR yes 82410055
chr12 53955541 53955550 JDP2 JASPAR yes 120991009
chr12 53955541 53955552 FOSL2 JASPAR yes 82410056
chr12 53955541 53955552 JUNB JASPAR yes 82410057
chr12 53955541 53955552 FOSL2 JASPAR yes 120991010
chr12 53955541 53955552 JUNB JASPAR yes 120991011
chr12 53955541 53955555 JUN JASPAR yes 82410058
chr12 53955541 53955555 JUN JASPAR yes 120991012
chr12 53955549 53955560 SPDEF JASPAR yes 82410059
chr12 53955549 53955560 SPDEF JASPAR yes 120991013
chr12 53955560 53955574 POU4F1 JASPAR yes 82410060
chr12 53955560 53955574 POU4F1 JASPAR yes 120991014
chr12 53955578 53955591 DUXA JASPAR yes 82410061
chr12 53955578 53955591 DUXA JASPAR yes 120991015
chr12 53955579 53955590 BATF JASPAR yes 82410062
chr12 53955579 53955590 DUX4 JASPAR yes 82410063
chr12 53955579 53955590 BATF JASPAR yes 120991016
chr12 53955579 53955590 DUX4 JASPAR yes 120991017
chr12 53955581 53955592 FOS JASPAR yes 82410064
chr12 53955581 53955592 JUND JASPAR yes 82410065
chr12 53955581 53955592 NFE2 JASPAR yes 82410066
chr12 53955581 53955592 FOS JASPAR yes 120991018
chr12 53955581 53955592 JUND JASPAR yes 120991019
chr12 53955581 53955592 NFE2 JASPAR yes 120991020
chr12 53955582 53955590 JUND TRANSFAC yes 82410067
chr12 53955582 53955590 JUND TRANSFAC yes 120991021
chr12 53955582 53955591 JDP2 JASPAR yes 82410068
chr12 53955582 53955591 JDP2 JASPAR yes 120991022
chr12 53955582 53955593 FOSL2 JASPAR yes 82410069
chr12 53955582 53955593 JUNB JASPAR yes 82410070
chr12 53955582 53955593 FOSL2 JASPAR yes 120991023
chr12 53955582 53955593 JUNB JASPAR yes 120991024
chr12 53955582 53955596 JUN JASPAR yes 82410071
chr12 53955582 53955596 JUN JASPAR yes 120991025
chr12 53955583 53955589 JUN TRANSFAC yes 82410072
chr12 53955583 53955589 JUN TRANSFAC yes 120991026
chr12 53955588 53955592 YY1 TRANSFAC yes 82410073
chr12 53955588 53955592 YY1 TRANSFAC yes 120991027
chr12 53955588 53955603 HNF4A JASPAR yes 82410074
chr12 53955588 53955603 HNF4A JASPAR yes 120991028
chr12 53955591 53955597 TCF1 TRANSFAC yes 82410075
chr12 53955591 53955597 TCF1 TRANSFAC yes 120991029
chr12 53955610 53955622 FOXI1 JASPAR yes 82410076
chr12 53955610 53955622 FOXI1 JASPAR yes 120991030
chr12 53955613 53955623 HOXB13 JASPAR yes 82410077
chr12 53955613 53955623 HOXB13 JASPAR yes 120991031
chr12 53955623 53955638 RUNX2 JASPAR yes 82410078
chr12 53955623 53955638 RUNX2 JASPAR yes 120991032
chr12 53955623 53955642 RFX2 JASPAR yes 82410079
chr12 53955623 53955642 RFX2 JASPAR yes 120991033
chr12 53955625 53955640 RFX5 JASPAR yes 82410080
chr12 53955625 53955640 RFX5 JASPAR yes 120991034
SNP sites on vista13531[chr12:53955466-53955638]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 53955485 rs1485394 A C
FOS FOSL2 FOXO3 JUN JUND NFYA TCF12 ZNF410
2646672
Genes possibly regulated by vista13531[chr12:53955466-53955638]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 53874274 53893847 - MAP3K12 ENSG00000139625.8 53893847 0.77 1.0 12126 38381
chr12 53894705 53900215 + TARBP2 ENSG00000139546.6 53894705 0.65 1.0 12127 39239
chr12 53900472 54019763 - RP11-793H13.10 ENSG00000267281.2 54019763 0.87 0.95 12128 35875
chr12 53900474 53901422 - NPFF ENSG00000139574.7 53901422 0.7 0.9 12129 45956
chr12 53901640 54020199 - ATF7 ENSG00000170653.14 54020199 0.62 0.99 12130 35439
Expression level of Genes
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miRNAs possibly regulated by vista13531[chr12:53955466-53955638]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results