EnhancerDB
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  3. vista1356[chr1:42248889-42249252]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1356[chr1:42248889-42249252]
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Tissue distribution of vista1356
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Transcription factor that possibly regulate vista1356[chr1:42248889-42249252]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42248893 42248913 RREB1 JASPAR yes 28422100
chr1 42248893 42248913 RREB1 JASPAR yes 118280064
chr1 42248896 42248916 RREB1 JASPAR yes 28422101
chr1 42248896 42248916 RREB1 JASPAR yes 118280065
chr1 42248899 42248919 RREB1 JASPAR yes 28422102
chr1 42248899 42248919 RREB1 JASPAR yes 118280066
chr1 42248913 42248918 SP1 TRANSFAC yes 28422103
chr1 42248913 42248918 SP1 TRANSFAC yes 118280067
chr1 42248930 42248951 ZNF263 JASPAR yes 28422104
chr1 42248930 42248951 ZNF263 JASPAR yes 118280068
chr1 42248934 42248947 SCRT2 JASPAR yes 28422105
chr1 42248934 42248947 SCRT2 JASPAR yes 118280069
chr1 42248942 42248948 PEA3 TRANSFAC yes 28422106
chr1 42248942 42248948 PEA3 TRANSFAC yes 118280070
chr1 42248942 42248963 ZNF263 JASPAR yes 28422107
chr1 42248942 42248963 ZNF263 JASPAR yes 118280071
chr1 42248943 42248951 EHF JASPAR yes 28422108
chr1 42248943 42248951 EHF JASPAR yes 118280072
chr1 42248943 42248964 ZNF263 JASPAR yes 28422109
chr1 42248943 42248964 ZNF263 JASPAR yes 118280073
chr1 42249002 42249008 ETS1 JASPAR yes 28422110
chr1 42249002 42249008 SPI1 JASPAR yes 28422111
chr1 42249002 42249008 ETS1 JASPAR yes 118280074
chr1 42249002 42249008 SPI1 JASPAR yes 118280075
chr1 42249013 42249017 YY1 TRANSFAC yes 28422112
chr1 42249013 42249017 YY1 TRANSFAC yes 118280076
chr1 42249018 42249032 JUN JASPAR yes 28422113
chr1 42249018 42249032 JUN JASPAR yes 118280077
chr1 42249020 42249031 BATF JASPAR yes 28422114
chr1 42249020 42249031 BATF JASPAR yes 118280078
chr1 42249022 42249033 FOS JASPAR yes 28422115
chr1 42249022 42249033 JUND JASPAR yes 28422116
chr1 42249022 42249033 FOS JASPAR yes 118280079
chr1 42249022 42249033 JUND JASPAR yes 118280080
chr1 42249023 42249034 FOSL2 JASPAR yes 28422117
chr1 42249023 42249034 JUNB JASPAR yes 28422118
chr1 42249023 42249034 FOSL2 JASPAR yes 118280081
chr1 42249023 42249034 JUNB JASPAR yes 118280082
chr1 42249023 42249037 JUN JASPAR yes 28422119
chr1 42249023 42249037 JUN JASPAR yes 118280083
chr1 42249024 42249030 JUN TRANSFAC yes 28422120
chr1 42249024 42249030 JUN TRANSFAC yes 118280084
chr1 42249027 42249039 HNF1B JASPAR yes 28422121
chr1 42249027 42249039 HNF1B JASPAR yes 118280085
chr1 42249032 42249043 BATF JASPAR yes 28422122
chr1 42249032 42249043 BATF JASPAR yes 118280086
chr1 42249047 42249057 ZNF740 JASPAR yes 28422123
chr1 42249047 42249057 ZNF740 JASPAR yes 118280087
chr1 42249060 42249071 HOXC12 JASPAR yes 28422124
chr1 42249060 42249071 HOXC12 JASPAR yes 118280088
chr1 42249071 42249078 SPIB JASPAR yes 28422125
chr1 42249071 42249078 SPIB JASPAR yes 118280089
chr1 42249085 42249089 YY1 TRANSFAC yes 28422126
chr1 42249085 42249089 YY1 TRANSFAC yes 118280090
chr1 42249101 42249111 HOXA13 JASPAR yes 28422127
chr1 42249101 42249111 HOXA13 JASPAR yes 118280091
chr1 42249101 42249113 MEF2D JASPAR yes 28422128
chr1 42249101 42249113 MEF2D JASPAR yes 118280092
chr1 42249102 42249114 FOXI1 JASPAR yes 28422129
chr1 42249102 42249114 FOXI1 JASPAR yes 118280093
chr1 42249109 42249112 MYB TRANSFAC yes 28422130
chr1 42249109 42249112 MYB TRANSFAC yes 118280094
chr1 42249123 42249132 NKX3-2 JASPAR yes 28422131
chr1 42249123 42249132 NKX3-2 JASPAR yes 118280095
chr1 42249123 42249133 NKX2-3 JASPAR yes 28422132
chr1 42249123 42249133 NKX2-3 JASPAR yes 118280096
chr1 42249124 42249132 ISL2 JASPAR yes 28422133
chr1 42249124 42249132 ISL2 JASPAR yes 118280097
chr1 42249129 42249132 MYB TRANSFAC yes 28422134
chr1 42249129 42249132 MYB TRANSFAC yes 118280098
chr1 42249131 42249146 PRDM1 JASPAR yes 28422135
chr1 42249131 42249146 PRDM1 JASPAR yes 118280099
chr1 42249134 42249155 ZNF263 JASPAR yes 28422136
chr1 42249134 42249155 ZNF263 JASPAR yes 118280100
chr1 42249136 42249157 ZNF263 JASPAR yes 28422137
chr1 42249136 42249157 ZNF263 JASPAR yes 118280101
chr1 42249138 42249159 ZNF263 JASPAR yes 28422138
chr1 42249138 42249159 ZNF263 JASPAR yes 118280102
chr1 42249144 42249150 MAZ TRANSFAC yes 28422139
chr1 42249144 42249150 MAZ TRANSFAC yes 118280103
chr1 42249144 42249155 E2F6 JASPAR yes 28422140
chr1 42249144 42249155 E2F6 JASPAR yes 118280104
chr1 42249146 42249154 SP1 TRANSFAC yes 28422141
chr1 42249146 42249154 SP1 TRANSFAC yes 118280105
chr1 42249148 42249154 MAZ TRANSFAC yes 28422142
chr1 42249148 42249154 MAZ TRANSFAC yes 118280106
chr1 42249148 42249159 E2F6 JASPAR yes 28422143
chr1 42249148 42249159 E2F6 JASPAR yes 118280107
chr1 42249152 42249157 ETS2 TRANSFAC yes 28422144
chr1 42249152 42249157 ETS2 TRANSFAC yes 118280108
chr1 42249193 42249199 MAZ TRANSFAC yes 28422145
chr1 42249193 42249199 MAZ TRANSFAC yes 118280109
chr1 42249199 42249209 GCM2 JASPAR yes 28422146
chr1 42249199 42249209 GCM2 JASPAR yes 118280110
chr1 42249199 42249210 GCM1 JASPAR yes 28422147
chr1 42249199 42249210 GCM1 JASPAR yes 118280111
chr1 42249201 42249210 THAP1 JASPAR yes 28422148
chr1 42249201 42249210 THAP1 JASPAR yes 118280112
chr1 42249204 42249208 LFA1 TRANSFAC yes 28422149
chr1 42249204 42249208 LFA1 TRANSFAC yes 118280113
chr1 42249212 42249224 PKNOX1 JASPAR yes 28422150
chr1 42249212 42249224 PKNOX1 JASPAR yes 118280114
SNP sites on vista1356[chr1:42248889-42249252]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42248979 rs75570 A G no 264795
chr1 42249204 rs1810202 C T
GCM1 GCM2 LFA1 THAP1
264796
Genes possibly regulated by vista1356[chr1:42248889-42249252]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1356[chr1:42248889-42249252]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results