EnhancerDB
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  3. rs1810202[chr1:42249204]
Enhancers that have rs1810202[chr1:42249204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42213671 42252455 enh291
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 42248889 42249252 vista1356
VISTA
Transcript factors that have rs1810202[chr1:42249204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42248730 42249380 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107802978
chr1 42249199 42249209 GCM2 JASPAR yes 28422146
chr1 42249199 42249209 GCM2 JASPAR yes 118280110
chr1 42249199 42249210 GCM1 JASPAR yes 28422147
chr1 42249199 42249210 GCM1 JASPAR yes 118280111
chr1 42249201 42249210 THAP1 JASPAR yes 28422148
chr1 42249201 42249210 THAP1 JASPAR yes 118280112
chr1 42249204 42249208 LFA1 TRANSFAC yes 28422149
chr1 42249204 42249208 LFA1 TRANSFAC yes 118280113
Genes associated with rs1810202[chr1:42249204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More