EnhancerDB
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  3. vista1357[chr1:42264501-42264609]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1357[chr1:42264501-42264609]
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Tissue distribution of vista1357
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Transcription factor that possibly regulate vista1357[chr1:42264501-42264609]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42264493 42264504 FOXH1 JASPAR yes 28423682
chr1 42264493 42264504 FOXH1 JASPAR yes 118280115
chr1 42264497 42264508 HOXC12 JASPAR yes 28423684
chr1 42264497 42264508 HOXC12 JASPAR yes 118280116
chr1 42264557 42264575 TP63 JASPAR yes 28423685
chr1 42264557 42264575 TP63 JASPAR yes 118280117
chr1 42264589 42264595 NFE2 TRANSFAC yes 28423686
chr1 42264589 42264595 NFE2 TRANSFAC yes 118280118
chr1 42264594 42264598 H1TF2 TRANSFAC yes 28423687
chr1 42264594 42264598 NFE TRANSFAC yes 28423688
chr1 42264594 42264598 SRF TRANSFAC yes 28423689
chr1 42264594 42264598 H1TF2 TRANSFAC yes 118280119
chr1 42264594 42264598 NFE TRANSFAC yes 118280120
chr1 42264594 42264598 SRF TRANSFAC yes 118280121
chr1 42264596 42264608 FOXC2 JASPAR yes 28423690
chr1 42264596 42264608 FOXC2 JASPAR yes 118280122
chr1 42264597 42264608 FOXB1 JASPAR yes 28423691
chr1 42264597 42264608 FOXC1 JASPAR yes 28423692
chr1 42264597 42264608 FOXB1 JASPAR yes 118280123
chr1 42264597 42264608 FOXC1 JASPAR yes 118280124
SNP sites on vista1357[chr1:42264501-42264609]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42264555 rs184659639 T C no 264925
chr1 42264563 rs188584765 G A
TP63
264926
chr1 42264598 rs78974849 A G
FOXB1 FOXC1 FOXC2 H1TF2 NFE SRF
264927
Genes possibly regulated by vista1357[chr1:42264501-42264609]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1357[chr1:42264501-42264609]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr5 92956416 92956436 - hsa-miR-2277-3p MIMAT0011777 93447339 0.00014791653866196974 0.790987 0.676023 1312
Expression level of miRNAs
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