EnhancerDB
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  3. rs78974849[chr1:42264598]
Enhancers that have rs78974849[chr1:42264598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42263485 42281915 enh292
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Heart
chr1 42264501 42264609 vista1357
VISTA
Transcript factors that have rs78974849[chr1:42264598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42263273 42265523 ZNF274 GTRD no Bone Marrow (K562) 107802979
chr1 42264594 42264598 H1TF2 TRANSFAC yes 28423687
chr1 42264594 42264598 NFE TRANSFAC yes 28423688
chr1 42264594 42264598 SRF TRANSFAC yes 28423689
chr1 42264594 42264598 H1TF2 TRANSFAC yes 118280119
chr1 42264594 42264598 NFE TRANSFAC yes 118280120
chr1 42264594 42264598 SRF TRANSFAC yes 118280121
chr1 42264596 42264608 FOXC2 JASPAR yes 28423690
chr1 42264596 42264608 FOXC2 JASPAR yes 118280122
chr1 42264597 42264608 FOXB1 JASPAR yes 28423691
chr1 42264597 42264608 FOXC1 JASPAR yes 28423692
chr1 42264597 42264608 FOXB1 JASPAR yes 118280123
chr1 42264597 42264608 FOXC1 JASPAR yes 118280124
Genes associated with rs78974849[chr1:42264598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More