EnhancerDB
  1. Home
  2. Enhancers
  3. vista1367[chr1:42356899-42357259]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1367[chr1:42356899-42357259]
Back to top
Tissue distribution of vista1367
Back to top
Transcription factor that possibly regulate vista1367[chr1:42356899-42357259]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42356890 42356900 CUX1 JASPAR yes 28434331
chr1 42356890 42356900 CUX2 JASPAR yes 28434332
chr1 42356890 42356900 CUX1 JASPAR yes 118280621
chr1 42356890 42356900 CUX2 JASPAR yes 118280622
chr1 42356910 42356925 FOXP1 JASPAR yes 28434333
chr1 42356910 42356925 FOXP1 JASPAR yes 118280623
chr1 42356913 42356924 FOXP2 JASPAR yes 28434334
chr1 42356913 42356924 FOXP2 JASPAR yes 118280624
chr1 42356939 42356959 RREB1 JASPAR yes 28434335
chr1 42356939 42356959 RREB1 JASPAR yes 118280625
chr1 42356962 42356966 YY1 TRANSFAC yes 28434336
chr1 42356962 42356966 YY1 TRANSFAC yes 118280626
chr1 42356962 42356973 CEBPB JASPAR yes 28434337
chr1 42356962 42356973 CEBPB JASPAR yes 118280627
chr1 42356962 42356976 SPIC JASPAR yes 28434338
chr1 42356962 42356976 SPIC JASPAR yes 118280628
chr1 42356963 42356974 CEBPA JASPAR yes 28434339
chr1 42356963 42356974 CEBPA JASPAR yes 118280629
chr1 42356965 42356983 SRF JASPAR yes 28434340
chr1 42356965 42356983 SRF JASPAR yes 118280630
chr1 42356968 42356972 H1TF2 TRANSFAC yes 28434341
chr1 42356968 42356972 NFE TRANSFAC yes 28434342
chr1 42356968 42356972 SRF TRANSFAC yes 28434343
chr1 42356968 42356972 H1TF2 TRANSFAC yes 118280631
chr1 42356968 42356972 NFE TRANSFAC yes 118280632
chr1 42356968 42356972 SRF TRANSFAC yes 118280633
chr1 42356988 42356992 YY1 TRANSFAC yes 28434344
chr1 42356988 42356992 YY1 TRANSFAC yes 118280634
chr1 42357019 42357033 E2F7 JASPAR yes 28434345
chr1 42357019 42357033 E2F7 JASPAR yes 118280635
chr1 42357030 42357042 IRF1 JASPAR yes 28434346
chr1 42357030 42357042 IRF1 JASPAR yes 118280636
chr1 42357039 42357049 ALX3 JASPAR yes 28434347
chr1 42357039 42357049 GSX2 JASPAR yes 28434348
chr1 42357039 42357049 MIXL1 JASPAR yes 28434349
chr1 42357039 42357049 MNX1 JASPAR yes 28434350
chr1 42357039 42357049 ALX3 JASPAR yes 118280637
chr1 42357039 42357049 GSX2 JASPAR yes 118280638
chr1 42357039 42357049 MIXL1 JASPAR yes 118280639
chr1 42357039 42357049 MNX1 JASPAR yes 118280640
chr1 42357040 42357048 ISX JASPAR yes 28434351
chr1 42357040 42357048 LHX9 JASPAR yes 28434352
chr1 42357040 42357048 LMX1B JASPAR yes 28434353
chr1 42357040 42357048 PRRX1 JASPAR yes 28434354
chr1 42357040 42357048 RAX2 JASPAR yes 28434355
chr1 42357040 42357048 SHOX JASPAR yes 28434356
chr1 42357040 42357048 UNCX JASPAR yes 28434357
chr1 42357040 42357048 ISX JASPAR yes 118280641
chr1 42357040 42357048 LHX9 JASPAR yes 118280642
chr1 42357040 42357048 LMX1B JASPAR yes 118280643
chr1 42357040 42357048 PRRX1 JASPAR yes 118280644
chr1 42357040 42357048 RAX2 JASPAR yes 118280645
chr1 42357040 42357048 SHOX JASPAR yes 118280646
chr1 42357040 42357048 UNCX JASPAR yes 118280647
chr1 42357049 42357055 TCF4 TRANSFAC yes 28434358
chr1 42357049 42357055 TCF4 TRANSFAC yes 118280648
chr1 42357069 42357073 YY1 TRANSFAC yes 28434359
chr1 42357069 42357073 YY1 TRANSFAC yes 118280649
chr1 42357079 42357082 MYB TRANSFAC yes 28434360
chr1 42357079 42357082 MYB TRANSFAC yes 118280650
chr1 42357116 42357120 LFA1 TRANSFAC yes 28434361
chr1 42357116 42357120 LFA1 TRANSFAC yes 118280651
chr1 42357138 42357154 RFX2 JASPAR yes 28434362
chr1 42357138 42357154 RFX5 JASPAR yes 28434363
chr1 42357138 42357154 RFX2 JASPAR yes 118280652
chr1 42357138 42357154 RFX5 JASPAR yes 118280653
chr1 42357152 42357156 H4TF2 TRANSFAC yes 28434364
chr1 42357152 42357156 H4TF2 TRANSFAC yes 118280654
chr1 42357161 42357167 TCF4 TRANSFAC yes 28434365
chr1 42357161 42357167 TCF4 TRANSFAC yes 118280655
chr1 42357165 42357180 ESR2 JASPAR yes 28434366
chr1 42357165 42357180 ESR2 JASPAR yes 118280656
chr1 42357173 42357179 NFE2 TRANSFAC yes 28434367
chr1 42357173 42357179 NFE2 TRANSFAC yes 118280657
chr1 42357176 42357182 SP1 TRANSFAC yes 28434368
chr1 42357176 42357182 SP1 TRANSFAC yes 118280658
chr1 42357195 42357211 ZNF143 JASPAR yes 28434369
chr1 42357195 42357211 ZNF143 JASPAR yes 118280659
chr1 42357198 42357210 ELF1 JASPAR yes 28434370
chr1 42357198 42357210 ELF4 JASPAR yes 28434371
chr1 42357198 42357210 ELF1 JASPAR yes 118280660
chr1 42357198 42357210 ELF4 JASPAR yes 118280661
chr1 42357198 42357211 ELF1 JASPAR yes 28434372
chr1 42357198 42357211 ELF1 JASPAR yes 118280662
chr1 42357203 42357223 PPARG JASPAR yes 28434373
chr1 42357203 42357223 PPARG JASPAR yes 118280663
chr1 42357207 42357211 H4TF2 TRANSFAC yes 28434374
chr1 42357207 42357211 H4TF2 TRANSFAC yes 118280664
chr1 42357223 42357227 YY1 TRANSFAC yes 28434375
chr1 42357223 42357227 YY1 TRANSFAC yes 118280665
chr1 42357234 42357242 MEIS2 JASPAR yes 28434376
chr1 42357234 42357242 MEIS3 JASPAR yes 28434377
chr1 42357234 42357242 MEIS2 JASPAR yes 118280666
chr1 42357234 42357242 MEIS3 JASPAR yes 118280667
chr1 42357235 42357239 NFE TRANSFAC yes 28434378
chr1 42357235 42357239 NFE TRANSFAC yes 118280668
chr1 42357249 42357255 MZF1 JASPAR yes 28434379
chr1 42357249 42357255 MZF1 JASPAR yes 118280669
SNP sites on vista1367[chr1:42356899-42357259]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42356899 rs138387513 G A
CUX1 CUX2
265796
chr1 42356920 rs114686268 A C
FOXP1 FOXP2
265797
chr1 42356988 rs12064813 G T
YY1
265798
chr1 42357003 rs2764834 T G no 265799
chr1 42357008 rs2764835 C G no 265800
chr1 42357040 rs12061198 T C
ALX3 GSX2 IRF1 ISX LHX9 LMX1B MIXL1 MNX1 PRRX1 RAX2 SHOX UNCX
265801
chr1 42357199 rs115566099 C T
ELF1 ELF4 ZNF143
265802
Genes possibly regulated by vista1367[chr1:42356899-42357259]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista1367[chr1:42356899-42357259]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results