EnhancerDB
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  3. vista1393[chr1:43471435-43471828]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1393[chr1:43471435-43471828]
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Tissue distribution of vista1393
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Transcription factor that possibly regulate vista1393[chr1:43471435-43471828]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 43471388 43471675 GATA2 UCSC Txn Factor no Conserved 107803012
chr1 43471470 43471474 NFE TRANSFAC yes 28477092
chr1 43471470 43471474 NFE TRANSFAC yes 118282273
chr1 43471471 43471476 GATA2 JASPAR yes 28477093
chr1 43471471 43471476 GATA2 JASPAR yes 118282274
chr1 43471511 43471516 GATA2 JASPAR yes 28477094
chr1 43471511 43471516 GATA2 JASPAR yes 118282275
chr1 43471546 43471567 REST JASPAR yes 28477095
chr1 43471546 43471567 REST JASPAR yes 118282276
chr1 43471549 43471559 ID4 JASPAR yes 28477096
chr1 43471549 43471559 TCF3 JASPAR yes 28477097
chr1 43471549 43471559 TCF4 JASPAR yes 28477098
chr1 43471549 43471559 ID4 JASPAR yes 118282277
chr1 43471549 43471559 TCF3 JASPAR yes 118282278
chr1 43471549 43471559 TCF4 JASPAR yes 118282279
chr1 43471551 43471556 USF2 TRANSFAC yes 28477099
chr1 43471551 43471556 USF2 TRANSFAC yes 118282280
chr1 43471583 43471598 SCRT1 JASPAR yes 28477100
chr1 43471583 43471598 SCRT1 JASPAR yes 118282281
chr1 43471585 43471598 SCRT2 JASPAR yes 28477101
chr1 43471585 43471598 SCRT2 JASPAR yes 118282282
chr1 43471595 43471616 REST JASPAR yes 28477102
chr1 43471595 43471616 REST JASPAR yes 118282283
chr1 43471607 43471622 TFAP2A JASPAR yes 28477103
chr1 43471607 43471622 TFAP2C JASPAR yes 28477104
chr1 43471607 43471622 TFAP2A JASPAR yes 118282284
chr1 43471607 43471622 TFAP2C JASPAR yes 118282285
chr1 43471614 43471629 NR2C2 JASPAR yes 28477105
chr1 43471614 43471629 NR2C2 JASPAR yes 118282286
chr1 43471617 43471621 LFA1 TRANSFAC yes 28477106
chr1 43471617 43471621 LFA1 TRANSFAC yes 118282287
chr1 43471622 43471627 SP1 TRANSFAC yes 28477107
chr1 43471622 43471627 SP1 TRANSFAC yes 118282288
chr1 43471628 43471642 STAT1 JASPAR yes 28477108
chr1 43471628 43471642 STAT1 JASPAR yes 118282289
chr1 43471634 43471638 YY1 TRANSFAC yes 28477109
chr1 43471634 43471638 YY1 TRANSFAC yes 118282290
chr1 43471689 43471708 PAX5 JASPAR yes 28477110
chr1 43471689 43471708 PAX5 JASPAR yes 118282291
chr1 43471714 43471731 BCL6B JASPAR yes 28477111
chr1 43471714 43471731 BCL6B JASPAR yes 118282292
chr1 43471715 43471730 STAT1 JASPAR yes 28477112
chr1 43471715 43471730 STAT1 JASPAR yes 118282293
chr1 43471717 43471728 STAT1 JASPAR yes 28477113
chr1 43471717 43471728 STAT3 JASPAR yes 28477114
chr1 43471717 43471728 STAT1 JASPAR yes 118282294
chr1 43471717 43471728 STAT3 JASPAR yes 118282295
chr1 43471737 43471757 ESR1 JASPAR yes 28477115
chr1 43471737 43471757 ESR1 JASPAR yes 118282296
chr1 43471753 43471763 MZF1 JASPAR yes 28477116
chr1 43471753 43471763 MZF1 JASPAR yes 118282297
chr1 43471753 43471768 NR2C2 JASPAR yes 28477117
chr1 43471753 43471768 NR2C2 JASPAR yes 118282298
chr1 43471783 43471787 NFE TRANSFAC yes 28477118
chr1 43471783 43471787 NFE TRANSFAC yes 118282299
chr1 43471784 43471789 GATA2 JASPAR yes 28477119
chr1 43471784 43471789 GATA2 JASPAR yes 118282300
chr1 43471786 43471792 MZF1 JASPAR yes 28477120
chr1 43471786 43471792 MZF1 JASPAR yes 118282301
chr1 43471793 43471803 SREBF1 JASPAR yes 28477121
chr1 43471793 43471803 SREBF1 JASPAR yes 118282302
chr1 43471797 43471811 GATA2 JASPAR yes 28477122
chr1 43471797 43471811 GATA2 JASPAR yes 118282303
chr1 43471799 43471805 GATA1 TRANSFAC yes 28477123
chr1 43471799 43471805 GATA1 TRANSFAC yes 118282304
SNP sites on vista1393[chr1:43471435-43471828]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 43471573 rs148579137 T C
GATA2
270274
chr1 43471613 rs13375629 C T
GATA2 REST TFAP2A TFAP2C
270275
chr1 43471620 rs112533370 G T
GATA2 LFA1 NR2C2 TFAP2A TFAP2C
270276
chr1 43471659 rs113565635 G A
GATA2
270277
chr1 43471759 rs370334622 G A
MZF1 NR2C2
270278
Genes possibly regulated by vista1393[chr1:43471435-43471828]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 43391052 43424530 - SLC2A1 ENSG00000117394.15 43424530 0.95 1.0 593 53095
Expression level of Genes
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miRNAs possibly regulated by vista1393[chr1:43471435-43471828]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results