EnhancerDB
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  3. rs13375629[chr1:43471613]
Enhancers that have rs13375629[chr1:43471613]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43453005 43490361 enh11805
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 43471435 43471828 vista1393
VISTA
Transcript factors that have rs13375629[chr1:43471613]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43471388 43471675 GATA2 UCSC Txn Factor no Conserved 107803012
chr1 43471595 43471616 REST JASPAR yes 28477102
chr1 43471595 43471616 REST JASPAR yes 118282283
chr1 43471607 43471622 TFAP2A JASPAR yes 28477103
chr1 43471607 43471622 TFAP2C JASPAR yes 28477104
chr1 43471607 43471622 TFAP2A JASPAR yes 118282284
chr1 43471607 43471622 TFAP2C JASPAR yes 118282285
Genes associated with rs13375629[chr1:43471613], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More