EnhancerDB
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  3. vista1401[chr1:43699387-43699508]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1401[chr1:43699387-43699508]
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Tissue distribution of vista1401
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Transcription factor that possibly regulate vista1401[chr1:43699387-43699508]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 43699388 43699402 RORA JASPAR yes 28488654
chr1 43699388 43699402 RORA JASPAR yes 118282671
chr1 43699391 43699401 RORA JASPAR yes 28488655
chr1 43699391 43699401 RORA JASPAR yes 118282672
chr1 43699393 43699408 NR2C2 JASPAR yes 28488656
chr1 43699393 43699408 NR2C2 JASPAR yes 118282673
chr1 43699396 43699400 ESR1 TRANSFAC yes 28488657
chr1 43699396 43699400 ESR1 TRANSFAC yes 118282674
chr1 43699405 43699410 TFAP2A TRANSFAC yes 28488658
chr1 43699405 43699410 TFAP2A TRANSFAC yes 118282675
chr1 43699405 43699411 MZF1 JASPAR yes 28488659
chr1 43699405 43699411 MZF1 JASPAR yes 118282676
chr1 43699407 43699412 ETS2 TRANSFAC yes 28488660
chr1 43699407 43699412 ETS2 TRANSFAC yes 118282677
chr1 43699411 43699431 TP63 JASPAR yes 28488661
chr1 43699411 43699431 TP63 JASPAR yes 118282678
chr1 43699412 43699430 TP53 JASPAR yes 28488662
chr1 43699412 43699430 TP73 JASPAR yes 28488663
chr1 43699412 43699430 TP53 JASPAR yes 118282679
chr1 43699412 43699430 TP73 JASPAR yes 118282680
chr1 43699413 43699428 TP53 JASPAR yes 28488664
chr1 43699413 43699428 TP53 JASPAR yes 118282681
chr1 43699420 43699441 ZNF263 JASPAR yes 28488665
chr1 43699420 43699441 ZNF263 JASPAR yes 118282682
chr1 43699495 43699499 NFE TRANSFAC yes 28488666
chr1 43699495 43699499 NFE TRANSFAC yes 118282683
chr1 43699500 43699505 ETS2 TRANSFAC yes 28488667
chr1 43699500 43699505 ETS2 TRANSFAC yes 118282684
SNP sites on vista1401[chr1:43699387-43699508]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 43699391 rs527426024 T A
RORA
271769
chr1 43699392 rs547416648 C A
RORA
271770
chr1 43699395 rs1212058 T C
NR2C2 RORA
271771
Genes possibly regulated by vista1401[chr1:43699387-43699508]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 43610824 43622067 + FAM183A ENSG00000186973.6 43610824 0.96 0.89 594 11437
chr1 43629846 43736607 - EBNA1BP2 ENSG00000117395.6 43736607 0.85 0.99 595 62901
chr1 43637820 43720029 + WDR65 ENSG00000243710.3 43637820 0.86 1.0 596 38433
chr1 43735665 43739673 + TMEM125 ENSG00000179178.6 43735665 0.89 1.0 597 63843
chr1 43747554 43751288 - C1orf210 ENSG00000253313.1 43751288 0.84 1.0 598 48220
chr1 43766664 43788779 + TIE1 ENSG00000066056.9 43766664 0.87 0.98 599 32844
Expression level of Genes
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miRNAs possibly regulated by vista1401[chr1:43699387-43699508]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results