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- rs1212058[chr1:43699395]
Enhancers that have rs1212058[chr1:43699395]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
43699225 |
43708175 |
enh297 |
|
|
| chr1 |
43699387 |
43699508 |
vista1401 |
|
|
Transcript factors that have rs1212058[chr1:43699395]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
43699388
|
43699402
|
RORA
|
JASPAR
|
yes
|
|
28488654
|
|
|
chr1
|
43699388
|
43699402
|
RORA
|
JASPAR
|
yes
|
|
118282671
|
|
|
chr1
|
43699391
|
43699401
|
RORA
|
JASPAR
|
yes
|
|
28488655
|
|
|
chr1
|
43699391
|
43699401
|
RORA
|
JASPAR
|
yes
|
|
118282672
|
|
|
chr1
|
43699393
|
43699408
|
NR2C2
|
JASPAR
|
yes
|
|
28488656
|
|
|
chr1
|
43699393
|
43699408
|
NR2C2
|
JASPAR
|
yes
|
|
118282673
|
|
Genes associated with rs1212058[chr1:43699395], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr1
|
43824626
|
43828874
|
+
|
CDC20
|
ENSG00000117399.9
|
43824626
|
125231
|
Stomach
|
0.298325
|
601
|
|